BLASTX nr result

ID: Papaver29_contig00025949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00025949
         (848 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP11355.1| unnamed protein product [Coffea canephora]             49   2e-07
ref|XP_006606038.1| PREDICTED: putative F-box protein At3g58860-...    46   5e-06
ref|XP_006606039.1| PREDICTED: putative F-box protein At3g58860-...    46   5e-06
ref|XP_007020971.1| Uncharacterized protein TCM_030985 [Theobrom...    45   8e-06

>emb|CDP11355.1| unnamed protein product [Coffea canephora]
          Length = 465

 Score = 48.5 bits (114), Expect(2) = 2e-07
 Identities = 26/74 (35%), Positives = 41/74 (55%)
 Frame = -3

Query: 780 RCILSISNSLKAFHL*VTDYVKVDSACCYLSPRYVHFPELKFLTLYGVRINDKYFIGRLL 601
           RC+ S     + F      ++ +DS+   + P+ VH P LK L L+GV + D   I ++L
Sbjct: 136 RCLTS-----ELFTCKTLQWLNLDSSIT-IKPKLVHLPNLKILRLFGVELTDDGSIPQIL 189

Query: 600 SGCPVLEELNLDSC 559
           +GCP LE L++  C
Sbjct: 190 AGCPKLEHLHMCGC 203



 Score = 35.0 bits (79), Expect(2) = 2e-07
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = -2

Query: 553 VYGVSDLCIASSTLKRLRIRGTSQG-EIKINAPILEDLSYTDFL-GKKNVYSFPSLLDAQ 380
           ++G+  L I++ +LK L          + I+ P LEDL Y DFL G   V +  SL+ A 
Sbjct: 205 LHGIQVLDISTPSLKSLEFFNCYGAFRVVIDTPNLEDLCYVDFLNGDPLVKNLKSLVKAY 264

Query: 379 IFPAAV 362
           +FP +V
Sbjct: 265 LFPYSV 270


>ref|XP_006606038.1| PREDICTED: putative F-box protein At3g58860-like isoform X1
           [Glycine max] gi|947041519|gb|KRG91243.1| hypothetical
           protein GLYMA_20G142600 [Glycine max]
          Length = 468

 Score = 45.8 bits (107), Expect(2) = 5e-06
 Identities = 24/45 (53%), Positives = 25/45 (55%)
 Frame = -3

Query: 687 PRYVHFPELKFLTLYGVRINDKYFIGRLLSGCPVLEELNLDSCTW 553
           P  +HF  LK LTL  V         RL SG PVLEEL LDSC W
Sbjct: 170 PSSIHFSNLKLLTLQYVVFPGYESTQRLFSGLPVLEELTLDSCCW 214



 Score = 32.7 bits (73), Expect(2) = 5e-06
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -1

Query: 848 INSWISSVIRHKVETINLLLPNSDVYSPFLIPSRLFTCE 732
           INSW+ + ++H V+ + L+L    +  P  +P  LFTC+
Sbjct: 117 INSWVCAAVKHNVQHLLLVLDQIHL-EPLELPHCLFTCD 154


>ref|XP_006606039.1| PREDICTED: putative F-box protein At3g58860-like isoform X2
           [Glycine max]
          Length = 414

 Score = 45.8 bits (107), Expect(2) = 5e-06
 Identities = 24/45 (53%), Positives = 25/45 (55%)
 Frame = -3

Query: 687 PRYVHFPELKFLTLYGVRINDKYFIGRLLSGCPVLEELNLDSCTW 553
           P  +HF  LK LTL  V         RL SG PVLEEL LDSC W
Sbjct: 170 PSSIHFSNLKLLTLQYVVFPGYESTQRLFSGLPVLEELTLDSCCW 214



 Score = 32.7 bits (73), Expect(2) = 5e-06
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -1

Query: 848 INSWISSVIRHKVETINLLLPNSDVYSPFLIPSRLFTCE 732
           INSW+ + ++H V+ + L+L    +  P  +P  LFTC+
Sbjct: 117 INSWVCAAVKHNVQHLLLVLDQIHL-EPLELPHCLFTCD 154


>ref|XP_007020971.1| Uncharacterized protein TCM_030985 [Theobroma cacao]
           gi|508720599|gb|EOY12496.1| Uncharacterized protein
           TCM_030985 [Theobroma cacao]
          Length = 816

 Score = 45.4 bits (106), Expect(2) = 8e-06
 Identities = 24/50 (48%), Positives = 26/50 (52%)
 Frame = -3

Query: 702 CCYLSPRYVHFPELKFLTLYGVRINDKYFIGRLLSGCPVLEELNLDSCTW 553
           C   +P  V F  LKFL L  V+ ND      L SGC VLEEL L  C W
Sbjct: 175 CTLRAPTPVCFSSLKFLKLSHVKFNDVQTCQELFSGCLVLEELVLQECNW 224



 Score = 32.3 bits (72), Expect(2) = 8e-06
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -1

Query: 848 INSWISSVIRHKVETINLLLPNSDVYSPFLIPSRLFTCE 732
           +NSW+ + IRHK ++++L L   +     ++P  LFT E
Sbjct: 129 LNSWLCAAIRHKTQSLDLFLSEQEY---VILPHCLFTSE 164


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