BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00023494
         (2105 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...   885   0.0  
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici...   868   0.0  
ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabi...   863   0.0  
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu...   863   0.0  
ref|XP_011028594.1| PREDICTED: RNA-dependent RNA polymerase 2 [P...   862   0.0  
emb|CDP19325.1| unnamed protein product [Coffea canephora]            861   0.0  
ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 is...   859   0.0  
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun...   855   0.0  
ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependen...   849   0.0  
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th...   848   0.0  
gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sin...   847   0.0  
ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...   846   0.0  
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   844   0.0  
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   844   0.0  
ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [C...   843   0.0  
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [S...   843   0.0  
ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...   842   0.0  
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis...   840   0.0  
ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [N...   838   0.0  
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2 [F...   838   0.0  

>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score =  885 bits (2286), Expect = 0.0
 Identities = 446/704 (63%), Positives = 539/704 (76%), Gaps = 3/704 (0%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            L V F DV+ S+  CLG             APKI+ K + P+  +     RY I KE  E
Sbjct: 152  LEVPFDDVLESSACCLGGGKVNALLLKLKYAPKIFQKFAGPNIASKFSADRYHISKEDAE 211

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSS 1746
            FLW+RTT+FS++KS+G+S +F W++ EG    DI  +FP Y+  +++ +LEQ E  CS S
Sbjct: 212  FLWLRTTDFSSIKSLGQSTSFCWEIKEGFPALDIFASFPYYKDLTEL-TLEQGEGFCSDS 270

Query: 1745 DLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLR 1566
             LVPL++C S  KL YEILFQLNSLVHAQK+S+ AV++D+IEILS+L +D+A  IL+KL 
Sbjct: 271  GLVPLVKCESGPKLAYEILFQLNSLVHAQKISLAAVDTDLIEILSNLPVDTAIMILQKLH 330

Query: 1565 QVKSTSYEVISFIQRQLHA---SMGHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEV 1395
            + KST Y+ ISFI+ Q H    ++ + P SS  +L NN +MSCHR L+TP+KIY LGPE+
Sbjct: 331  KRKSTRYDPISFIKAQAHIINMNIKNLPPSSHSRLTNNNVMSCHRVLVTPSKIYCLGPEL 390

Query: 1394 ESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVL 1215
            ES NYVVKH+A   SDF+RV+FVEEDW KL S+A++ SI +  F+ P+RT IYHRILS+L
Sbjct: 391  ESSNYVVKHYAAYASDFVRVSFVEEDWSKLPSNALSMSIRKAFFADPFRTEIYHRILSIL 450

Query: 1214 SNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARM 1035
              GIVIG KRF FLAFSASQLRS+SVWMFASNDK+   DIREWMGCF  IRSVSKCAARM
Sbjct: 451  REGIVIGAKRFQFLAFSASQLRSNSVWMFASNDKVRVDDIREWMGCFKKIRSVSKCAARM 510

Query: 1034 GQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMP 855
            GQLFSSS Q L VP QDVE IPDIE ++DG  YCFSDGIGKISLSFAK V++KC L + P
Sbjct: 511  GQLFSSSVQTLPVPVQDVEVIPDIEVTSDGFGYCFSDGIGKISLSFAKQVAQKCGLHQTP 570

Query: 854  WAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTL 675
             AFQIRYGGYKGV+ VDRNSFRKLSLR SM KF S+NRML +T  S+  PCYLNREIV+L
Sbjct: 571  SAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFESQNRMLNVTKWSESTPCYLNREIVSL 630

Query: 674  LSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSS 495
            LSTLG+EDE F AL   Q+HLLD++LTNR+ A+  L  M   + K IL +MLLQGYEP+ 
Sbjct: 631  LSTLGVEDENFEALLNEQMHLLDKMLTNRQAALDVLESMGGIDNKNILAKMLLQGYEPNV 690

Query: 494  EPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQ 315
            EPYL MML+ YR+ QLSDIR+R RIFVPK R+LIGCLDET  L+YGQ YVRVTMT  E +
Sbjct: 691  EPYLSMMLQAYRESQLSDIRTRCRIFVPKARVLIGCLDETGILNYGQVYVRVTMTKAEHK 750

Query: 314  CGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKG 135
            C +Q FF  V D T++V+GKV+VTKNPCLHPGDIRVL+AVYE  LE KGL DC++FPQKG
Sbjct: 751  CRNQSFFQKVDDTTSVVIGKVIVTKNPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQKG 810

Query: 134  ERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            ERPHPNECSGGDLDGD +F+CWDE LIP + + PMDY +RRPRI
Sbjct: 811  ERPHPNECSGGDLDGDQFFICWDEGLIPSQTEAPMDYTSRRPRI 854


>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 983

 Score =  868 bits (2244), Expect = 0.0
 Identities = 431/701 (61%), Positives = 537/701 (76%), Gaps = 3/701 (0%)
 Frame = -1

Query: 2099 VQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFEFL 1920
            + F DV+ + G  LG               +IY KIS PD  +     RY + KE F+F+
Sbjct: 3    ISFEDVLETVGCRLGGDTLNAILLKLKYGARIYKKISGPDIASKFSADRYHMCKEDFDFI 62

Query: 1919 WVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSSDL 1740
            WVRTT+FS++KS+G+S +F W+++EG   SDI  +FP Y    +   LE  E+  S+S++
Sbjct: 63   WVRTTDFSSVKSVGQSTSFCWEIEEGLEASDIFKSFPYYTEAREEVILEDGEEWGSASEI 122

Query: 1739 VPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLRQV 1560
            VPL++C SDSKLPYEILFQLNSLVH QK+S+ AV++++I  L SL++D+AT IL+KL ++
Sbjct: 123  VPLVKCGSDSKLPYEILFQLNSLVHTQKISLAAVDTNLITTLGSLTIDTATMILQKLHKL 182

Query: 1559 KSTSYEVISFIQRQLHA---SMGHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVES 1389
              T Y+ ++FI++QLH    ++     SS + L N+ +MSCHRALITP+KIY LGPE+ES
Sbjct: 183  AVTCYDPLAFIKKQLHVPGRNLKRPFFSSSKNLVNHNIMSCHRALITPSKIYCLGPELES 242

Query: 1388 WNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSN 1209
             NYVVK+FA   SDFMRVTFVEEDW KL ++A++ SI++GIF+KP+RT IYHRILS+L +
Sbjct: 243  SNYVVKNFASYASDFMRVTFVEEDWSKLPANAISMSIQRGIFAKPFRTGIYHRILSILRD 302

Query: 1208 GIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQ 1029
            GIVIG K+F FLAFSASQLRS+SVWMFASNDK  A++IREWMGCFN I S+SKCAARMGQ
Sbjct: 303  GIVIGAKKFEFLAFSASQLRSNSVWMFASNDKKKAEEIREWMGCFNKIHSISKCAARMGQ 362

Query: 1028 LFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMPWA 849
            LFSSSKQ   V  QD+E IPDIE ++DGI YCFSDGIGKISLSFA+ V++KC L R P A
Sbjct: 363  LFSSSKQTFIVSPQDMEIIPDIEVTSDGINYCFSDGIGKISLSFARQVAQKCGLNRTPSA 422

Query: 848  FQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTLLS 669
            FQIRYGGYKGV+ VDRNSFRKLSLR+SM KF S+NRML +T  S+ MPCYLNREI+TLL+
Sbjct: 423  FQIRYGGYKGVIAVDRNSFRKLSLRDSMCKFESENRMLNVTKWSESMPCYLNREIITLLT 482

Query: 668  TLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEP 489
            TLG++DE F  LQQ Q+ LL+++LTNRE A+  L  +     K IL++ML+QGYEP+ EP
Sbjct: 483  TLGVKDEIFEGLQQQQLQLLNRMLTNRESALNVLENLAWANCKNILIKMLVQGYEPNVEP 542

Query: 488  YLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQCG 309
            YL MML+ Y +  L ++RSR RIFVPKGR+LIGCLDET  LDYGQ YVR+TMT  ELQ  
Sbjct: 543  YLSMMLQAYHENLLVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAELQDA 602

Query: 308  SQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGER 129
             Q  FH V + TA+V GKV+VTKNPCLHPGDIRVL AVYE  LE KGL DC++FPQKGER
Sbjct: 603  DQASFHRVDETTAVVTGKVIVTKNPCLHPGDIRVLEAVYEVELEEKGLVDCILFPQKGER 662

Query: 128  PHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPR 6
            PHPNECSGGDLDGD +F+ WD+ LIP   ++PMDY  RRPR
Sbjct: 663  PHPNECSGGDLDGDQFFISWDKGLIPGETESPMDYQGRRPR 703


>ref|XP_010107450.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
            gi|587928851|gb|EXC16034.1| RNA-dependent RNA polymerase
            2 [Morus notabilis]
          Length = 1115

 Score =  863 bits (2229), Expect = 0.0
 Identities = 432/703 (61%), Positives = 526/703 (74%), Gaps = 2/703 (0%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            L V F DV+ + GYCL               PKIY +IS+P    +    RY I KE FE
Sbjct: 153  LEVAFEDVLETVGYCLDDGKLYAFLLQLKYGPKIYKRISRPSKFVAD---RYHICKEDFE 209

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSS 1746
            F WVRTT+F   KSIG S +  W   E    SD   +FP Y    K   LE  ++ CS S
Sbjct: 210  FHWVRTTDFLESKSIGHSTSLCWDAKEDFLSSDTFRSFPYYREGMKDLILEDSDEFCSVS 269

Query: 1745 DLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLR 1566
            + VPLI+CP+ S L YEILFQLNSLVH QK+S  + ++D+IE   SL++D+A  +++KL 
Sbjct: 270  ETVPLIKCPAGSNLSYEILFQLNSLVHMQKISFASADADLIEYFGSLNIDTANAVIQKLH 329

Query: 1565 QVKSTSYEVISFIQRQLHASMGH--KPSSSERKLKNNELMSCHRALITPTKIYLLGPEVE 1392
            ++KST Y+ +S  +   H    +   PSS+ ++L  N LMSCHRALITP+KIY +GPE+E
Sbjct: 330  KLKSTCYDPLSLAKTYAHILEKNTKNPSSAIKRLTENSLMSCHRALITPSKIYCMGPELE 389

Query: 1391 SWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLS 1212
            + NYVVK+FA   SDF+RVTFVEEDWGKL    V+TSIEQGIF+KPYRT IY RILS+L 
Sbjct: 390  TSNYVVKNFAAYASDFLRVTFVEEDWGKLHPHVVSTSIEQGIFAKPYRTGIYDRILSILR 449

Query: 1211 NGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMG 1032
            NGI+IG KR+ FLAFSASQLRSS+VWMFASND + A+DIREWMGCFN IRSVSKCAARMG
Sbjct: 450  NGILIGAKRYEFLAFSASQLRSSAVWMFASNDNVKAEDIREWMGCFNKIRSVSKCAARMG 509

Query: 1031 QLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMPW 852
            QLFSSS+Q L VP QD+E IPD+E +TDGI YCFSDGIGKIS SFA+ V++KC L+  P 
Sbjct: 510  QLFSSSRQTLIVPTQDLEIIPDVEVTTDGIDYCFSDGIGKISSSFARQVAQKCGLKETPS 569

Query: 851  AFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTLL 672
            AFQIRYGGYKGV+ V+R+SFRKLSLR SM KF S NRML +T  S  MPCYLNREIV+LL
Sbjct: 570  AFQIRYGGYKGVIAVNRSSFRKLSLRSSMLKFESSNRMLNVTKWSGSMPCYLNREIVSLL 629

Query: 671  STLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSE 492
            S+LG++DE F+AL + Q+ LL ++ TNRE A+  L  +N  +   IL++MLLQGYEP++E
Sbjct: 630  SSLGVKDESFLALLREQLLLLGKMRTNREAALNVLENLNGSDSSNILVKMLLQGYEPNAE 689

Query: 491  PYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQC 312
            PYL MM++ Y + QLSD+++R RIFVPKG++LIGCLDET  L+YGQ YVR+TM   EL+ 
Sbjct: 690  PYLSMMIQSYYENQLSDLKTRCRIFVPKGKVLIGCLDETGILEYGQVYVRLTMKKAELEA 749

Query: 311  GSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGE 132
            G+Q FF  V D+T+IVVGKVVVTKNPCLHPGD+RVL AVY+  LE +GL DCLVFPQKGE
Sbjct: 750  GNQSFFRKVDDETSIVVGKVVVTKNPCLHPGDVRVLEAVYDAKLEEEGLVDCLVFPQKGE 809

Query: 131  RPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            RPHPNECSGGDLDGDL+F+ WD NLIP R   PMDYI RRPRI
Sbjct: 810  RPHPNECSGGDLDGDLFFISWDTNLIPPRTTAPMDYIGRRPRI 852


>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
            gi|222868578|gb|EEF05709.1| hypothetical protein
            POPTR_0015s08500g [Populus trichocarpa]
          Length = 1110

 Score =  863 bits (2229), Expect = 0.0
 Identities = 429/701 (61%), Positives = 528/701 (75%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            LVV+F D++ + GY L               P+IY KIS P   +     RY   KE F+
Sbjct: 154  LVVEFEDILEAVGYPLDGDKVNAVVLKLRYGPRIYQKISGPGIASKFSTNRYFYCKEDFD 213

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSS 1746
            FLWVRTT+ SA+KSIG+S +F W++ EG   SD   NFP Y+ +     LE  E+ CS+S
Sbjct: 214  FLWVRTTDISAIKSIGQSTSFCWEIGEGLEASDTFRNFPYYQEDMNRLDLEDGEEFCSAS 273

Query: 1745 DLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLR 1566
            + VPLIRC SD KL YE+LFQLNSLVH QK+S+ AV+SD+I+IL +L++++A  IL+KL 
Sbjct: 274  ETVPLIRCGSD-KLAYEVLFQLNSLVHTQKISLAAVDSDLIKILRNLTVNTAIIILQKLH 332

Query: 1565 QVKSTSYEVISFIQRQLHASMGHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESW 1386
            ++K T Y+ +SF+++ L  S+   P S    L  N +MSCHRALITP+KI+ LGPE E+ 
Sbjct: 333  KLKMTCYDPLSFVKQSLRESLSSPPKS----LTENNIMSCHRALITPSKIFCLGPEYETS 388

Query: 1385 NYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNG 1206
            NYVVKHFA+  SDF+RVTFVEEDW KL ++A++TSI++GIF+KP+RT IYHRILS+L +G
Sbjct: 389  NYVVKHFAQYASDFIRVTFVEEDWSKLPANAISTSIQRGIFAKPFRTGIYHRILSILRDG 448

Query: 1205 IVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQL 1026
             VIG KRF FLAFSASQLRS+SVWMFASN+ + A+DIR+WMGCF+ IRSVSKCAARMGQL
Sbjct: 449  FVIGAKRFEFLAFSASQLRSNSVWMFASNNGVKAEDIRKWMGCFDKIRSVSKCAARMGQL 508

Query: 1025 FSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMPWAF 846
            FSSS Q   VP QDVE IPDIE +TDGI YCFSDGIGKISLSFAK V+ KC L   P AF
Sbjct: 509  FSSSLQTFVVPVQDVEIIPDIEVTTDGIDYCFSDGIGKISLSFAKQVAHKCGLSHTPSAF 568

Query: 845  QIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTLLST 666
            QIRYGGYKGV+ VDRNSFRKLSLR SM KF S+NRML +T  S+ MPCYLNREI++LLST
Sbjct: 569  QIRYGGYKGVVAVDRNSFRKLSLRSSMLKFDSENRMLNVTKWSESMPCYLNREIISLLST 628

Query: 665  LGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPY 486
            LG+ DE F ALQQ Q++ L ++LTN+E A+  L  +   + K IL+QMLLQGYEP+ EPY
Sbjct: 629  LGVADEIFQALQQKQLYRLRKMLTNKESALDVLENLAWADSKNILVQMLLQGYEPNVEPY 688

Query: 485  LFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQCGS 306
            L MML+ Y +  L ++RSR RIFVPKGR+LIGCLDE+  LDYGQ YVR+TMT  ELQC  
Sbjct: 689  LSMMLQAYHENSLMELRSRCRIFVPKGRILIGCLDESGILDYGQVYVRITMTKAELQCCD 748

Query: 305  QPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERP 126
            Q FF  V + T+ ++G+V VTKNPCLHPGDIRVL AVY+  LE KGL DC++FPQ G RP
Sbjct: 749  QSFFRKVDESTSTIIGEVAVTKNPCLHPGDIRVLEAVYDVELEEKGLVDCIIFPQNGGRP 808

Query: 125  HPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            HPNECSGGDLDGD +F+ WDE L+P   + PMDY+  R RI
Sbjct: 809  HPNECSGGDLDGDQFFISWDEGLLPCHTEAPMDYVGGRQRI 849


>ref|XP_011028594.1| PREDICTED: RNA-dependent RNA polymerase 2 [Populus euphratica]
          Length = 1105

 Score =  862 bits (2227), Expect = 0.0
 Identities = 430/701 (61%), Positives = 529/701 (75%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            LVV+F D++ + G+ L               P+IY KIS P   +     RY   KE F+
Sbjct: 154  LVVEFEDILEAVGFPLDGDKVNAVVLKLRYGPRIYQKISGPGIASKFSTNRYFYCKEDFD 213

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSS 1746
            FLWVRTT+ SA+KSIG+S +F W++ EG   SD   NFP Y+    I  LE  E+  S+S
Sbjct: 214  FLWVRTTDISAIKSIGQSTSFCWEIGEGLEASDTFRNFPYYQEFMNILDLEDGEEFRSAS 273

Query: 1745 DLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLR 1566
            + VPLIRC SD KL YE+LFQLNSLVH QK+S+ AV+SD+++IL +L++++A  IL+KL 
Sbjct: 274  ETVPLIRCGSD-KLAYEVLFQLNSLVHTQKISLAAVDSDLMKILRNLTVNTAFIILQKLH 332

Query: 1565 QVKSTSYEVISFIQRQLHASMGHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESW 1386
            ++K T Y+ +SF+++ L  S+   P S    L  N +MSCHRALITP+KI+ LGPE E+ 
Sbjct: 333  KLKMTCYDPLSFVKQSLRESLSSPPKS----LTENNIMSCHRALITPSKIFCLGPEYETS 388

Query: 1385 NYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNG 1206
            NYVVKHFA+  SDF+RVTFVEEDW KL ++A++TSI++GIF+KP+RT IYHRILS+L +G
Sbjct: 389  NYVVKHFAQYASDFIRVTFVEEDWSKLPANAISTSIQRGIFAKPFRTGIYHRILSILRDG 448

Query: 1205 IVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQL 1026
            IVIG KRF FLAFSASQLRS+SVWMFASN+ + A+DIR+WMGCF+ IRSVSKCAARMGQL
Sbjct: 449  IVIGAKRFEFLAFSASQLRSNSVWMFASNNDVKAEDIRKWMGCFDKIRSVSKCAARMGQL 508

Query: 1025 FSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMPWAF 846
            FSSS Q   VP QDVE IPDIE +TDGI YCFSDGIGKISLSFAK V+ KC L   P AF
Sbjct: 509  FSSSLQTFVVPVQDVEIIPDIEVTTDGIDYCFSDGIGKISLSFAKQVAHKCGLSHTPSAF 568

Query: 845  QIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTLLST 666
            QIRYGGYKGV+ VDRNSFRKLSLR SM KF S+NRML +T  S+ MPCYLNREI++LLST
Sbjct: 569  QIRYGGYKGVVAVDRNSFRKLSLRSSMLKFDSENRMLNVTKWSESMPCYLNREIISLLST 628

Query: 665  LGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPY 486
            LG+ DE F ALQQ Q++ L ++LTN+E A+  L  +   + K IL+QMLLQGYEP+ EPY
Sbjct: 629  LGVADEIFQALQQKQLYQLRKMLTNKESALDVLENLVWADSKNILVQMLLQGYEPNVEPY 688

Query: 485  LFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQCGS 306
            L MML+ Y +  L ++RSR RIFVPKGR+LIGCLDE+ TLDYGQ YVR+TMT  ELQC  
Sbjct: 689  LSMMLQAYHENSLMELRSRCRIFVPKGRILIGCLDESGTLDYGQVYVRITMTKAELQCSD 748

Query: 305  QPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERP 126
            Q FF  V + T+I++G+V VTKNPCLHPGDIRVL AVY   LE KGL DC++FPQ G RP
Sbjct: 749  QSFFRKVDESTSIIIGEVAVTKNPCLHPGDIRVLEAVYNVELEEKGLVDCIIFPQNGGRP 808

Query: 125  HPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            HPNECSGGDLDGD +F+ WDE L+P   + PMDY+  R RI
Sbjct: 809  HPNECSGGDLDGDQFFISWDEGLLPCHTEAPMDYVGGRQRI 849


>emb|CDP19325.1| unnamed protein product [Coffea canephora]
          Length = 1120

 Score =  861 bits (2224), Expect = 0.0
 Identities = 432/705 (61%), Positives = 531/705 (75%), Gaps = 4/705 (0%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            L VQFGDV+ S G CL              APKIY K S P+  A     RY   KE F+
Sbjct: 154  LEVQFGDVLESCGCCLDDQNPNAVLLKLKHAPKIYQKFSGPNVAAKFSADRYHTCKEDFD 213

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSS 1746
            F+WVRTT+FS++KSIG S +   +++EG S  D+  N P         +LE+ EQ  ++S
Sbjct: 214  FIWVRTTDFSSIKSIGYSSSLCLEIEEGLSGLDLFTNLPYCSRFFLELTLEEGEQFSTTS 273

Query: 1745 DLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLR 1566
            +LVPL++C SD K+ YEILFQLNSLVH QKLS+ AVNS+++E+LS L +D A  IL+K+ 
Sbjct: 274  ELVPLVKCCSDIKITYEILFQLNSLVHTQKLSLGAVNSELMEVLSGLDMDIAMPILQKMH 333

Query: 1565 QVKSTSYEVISFIQRQLHASMGHKPS----SSERKLKNNELMSCHRALITPTKIYLLGPE 1398
            ++++  Y+ +SFI ++LH  MG   S    SS  + KNN +M+CHR L+TP+K+Y LGPE
Sbjct: 334  KLETMCYDPVSFINKRLHV-MGENASNLRSSSYGRPKNNNMMTCHRVLVTPSKVYCLGPE 392

Query: 1397 VESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSV 1218
            +E+ NY+VK+FA   SDF+RVTFVEEDWGKL    V TS  +G+F+K Y+T+IYHRILS+
Sbjct: 393  LETSNYIVKNFASYASDFLRVTFVEEDWGKLSPSVVNTSFGRGLFAKNYKTNIYHRILSI 452

Query: 1217 LSNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAAR 1038
            L +GIVIG KRF FLAFSASQLRS+SVWMFASN+ + A+DIR+WMGCFN IRSVSKCAAR
Sbjct: 453  LKDGIVIGEKRFLFLAFSASQLRSNSVWMFASNENLRAEDIRDWMGCFNKIRSVSKCAAR 512

Query: 1037 MGQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERM 858
            MGQLFSSS Q L+VP Q VE IPDIE +TDG  +CFSDGIGKIS  FA+ V++KC L   
Sbjct: 513  MGQLFSSSLQTLEVPPQQVEVIPDIEMTTDGENHCFSDGIGKISQGFARQVAQKCGLNYT 572

Query: 857  PWAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVT 678
            P AFQIRYGGYKGV+ VDR SFRKLSLR SM KF SKNRML +T  S+ MPCYLNREI+T
Sbjct: 573  PSAFQIRYGGYKGVIAVDRYSFRKLSLRSSMLKFESKNRMLNVTKWSEAMPCYLNREIIT 632

Query: 677  LLSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPS 498
            LLSTLG+ED+ F+A+Q  Q+HLLD++LT+RE A+  L  M   E K I+++ML QG+EP 
Sbjct: 633  LLSTLGVEDQVFLAMQYEQLHLLDKMLTHREAALDVLASMGVNETKSIVVRMLRQGFEPE 692

Query: 497  SEPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEEL 318
             EPYL M+L+ +R+ QLSD+RSR RIFVPKGR+L+GCLDET  LDYGQ Y+R+TMT  EL
Sbjct: 693  IEPYLSMILQSHRENQLSDLRSRCRIFVPKGRVLLGCLDETGILDYGQVYIRITMTKTEL 752

Query: 317  QCGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQK 138
            Q G Q FF  V + TAIV GKVVVTKNPCLHPGD+RVL AVYE  L+ +G+ DC++FP K
Sbjct: 753  QIGEQCFFQKVDETTAIVKGKVVVTKNPCLHPGDVRVLEAVYEFSLQERGMVDCILFPLK 812

Query: 137  GERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            G RPHPNECSGGDLDGDLYFV WDENLIP +  TPMDYI RR RI
Sbjct: 813  GVRPHPNECSGGDLDGDLYFVSWDENLIPFQTVTPMDYIDRRKRI 857


>ref|XP_012080101.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Jatropha
            curcas] gi|643720862|gb|KDP31126.1| hypothetical protein
            JCGZ_11502 [Jatropha curcas]
          Length = 1122

 Score =  859 bits (2219), Expect = 0.0
 Identities = 428/702 (60%), Positives = 535/702 (76%), Gaps = 3/702 (0%)
 Frame = -1

Query: 2099 VQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFEFL 1920
            ++F DV  + G+CLG              P+IY +IS PD  +     RY I KE F+F+
Sbjct: 158  IRFEDVKDAVGFCLGGDKVNAVLLKLRYGPRIYKRISGPDVASKFSADRYHICKEDFDFI 217

Query: 1919 WVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCS-SSD 1743
            WVRT +FS++KSIGKS +F W+++EG   SDI  +FP Y  + +   LE  E+    +S+
Sbjct: 218  WVRTADFSSVKSIGKSTSFCWEVEEGLDASDIFTSFPYYVEDRRDIVLEDGEKFHPITSE 277

Query: 1742 LVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLRQ 1563
            +VPL    SDSKL YEI FQLNSLVH  K+S+ AV++D+ +IL SL++D+A  IL+KL +
Sbjct: 278  MVPLAGYESDSKLAYEIFFQLNSLVHTHKISLAAVDTDLFKILGSLTIDTAMAILQKLHK 337

Query: 1562 VKSTSYEVISFIQRQLHASMGH--KPSSSERKLKNNELMSCHRALITPTKIYLLGPEVES 1389
            +  T Y+ +SF+++QLHA   +  KPSSS++   ++ +M CHRALITP+KIY LGPE+ES
Sbjct: 338  LTFTCYDPVSFVKKQLHAPRRNLKKPSSSQKSSTDHNIMICHRALITPSKIYCLGPELES 397

Query: 1388 WNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSN 1209
             NYVVK+FA   SDFMRVTFVEEDW KL  +A++TSI+ GIF+KP+RT IY RILSVL +
Sbjct: 398  SNYVVKNFASYASDFMRVTFVEEDWSKLPVNAISTSIQHGIFAKPFRTKIYERILSVLRD 457

Query: 1208 GIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQ 1029
            GIVIG KRF FLAFSASQLRS+SVWMFASND + A+DIR+WMGCFN IRS+SKCAARMGQ
Sbjct: 458  GIVIGAKRFEFLAFSASQLRSNSVWMFASNDNVKAEDIRQWMGCFNKIRSISKCAARMGQ 517

Query: 1028 LFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMPWA 849
            LFS+SKQ   VP +DVE IPDIE ++DGI YCFSDGIGKISLSFA+ V++KC L   P A
Sbjct: 518  LFSASKQTFVVPAEDVEIIPDIEVTSDGIGYCFSDGIGKISLSFAQQVAQKCGLNHTPSA 577

Query: 848  FQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTLLS 669
            FQIRYGG+KGV+ VDRNS RKLSLR SM KF S+NRML +T  S  MPCYLNREIVTLLS
Sbjct: 578  FQIRYGGFKGVIAVDRNSLRKLSLRSSMLKFESENRMLNVTKWSDSMPCYLNREIVTLLS 637

Query: 668  TLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEP 489
            TLG++DE F  LQQ Q+HLL ++L +RE A+  L  +   + + I+++MLLQGY+P+ EP
Sbjct: 638  TLGVKDEIFQGLQQQQLHLLGRMLNDREAALDVLENLAWVDSRNIMVKMLLQGYKPNVEP 697

Query: 488  YLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQCG 309
            YL MML+ Y +  L ++RSR R+FVPKGR+LIGCLDE   LDYGQ YVRVT++  ELQ  
Sbjct: 698  YLSMMLQAYHENLLVELRSRCRVFVPKGRILIGCLDEEGILDYGQIYVRVTLSKSELQNA 757

Query: 308  SQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGER 129
             Q FF  V + T+IV GKVVVTKNPCLHPGD+RVL AVYE  LE KGL DC++FPQKGER
Sbjct: 758  DQSFFRKVDETTSIVTGKVVVTKNPCLHPGDVRVLEAVYEVGLEEKGLVDCILFPQKGER 817

Query: 128  PHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            PHPNECSGGDLDGDL+F+ WDE+LIP + ++PMDY+ RRPRI
Sbjct: 818  PHPNECSGGDLDGDLFFISWDEDLIPSQTESPMDYLGRRPRI 859


>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
            gi|462407047|gb|EMJ12511.1| hypothetical protein
            PRUPE_ppa000513mg [Prunus persica]
          Length = 1118

 Score =  855 bits (2208), Expect = 0.0
 Identities = 424/705 (60%), Positives = 533/705 (75%), Gaps = 4/705 (0%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            L + F +++ S G  LG              P+I+ KIS P+  A     RY + K+ F+
Sbjct: 152  LEIAFENIMESFGCRLGGEKVNALLLKLKFGPRIFRKISGPNVAARFSTDRYHVCKDDFD 211

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKI-FSLEQVEQSCSS 1749
            FLWVRTT+FS +KSIG S +F W+++E  S SD+   FP Y+    +   L+  E+ CS 
Sbjct: 212  FLWVRTTDFSDMKSIGYSTSFCWEIEEEFSVSDVFECFPYYKDNDVVDLILDNGEKYCSP 271

Query: 1748 SDLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKL 1569
            S+ VPL++C SDSKLPYEILFQLN+LVH+QK+S+ A +SD+IE LS LS+D+   +L KL
Sbjct: 272  SETVPLVKCRSDSKLPYEILFQLNALVHSQKISLAATDSDLIEFLSGLSVDTTNVLLEKL 331

Query: 1568 RQVKSTSYEVISFIQRQLHA-SMGHK--PSSSERKLKNNELMSCHRALITPTKIYLLGPE 1398
             + K+T Y+ +SF++ QLH     HK  PS  +R +++N +MSCHR LITP+KI  LGPE
Sbjct: 332  HKRKTTCYDPLSFLKMQLHVLERNHKSRPSPYKRLMEHN-VMSCHRVLITPSKICCLGPE 390

Query: 1397 VESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSV 1218
            +E  NYVVK+FA   SDFMRVTFV+EDW KL ++A++TSI+QGIF+KP+RT IYHR+LS+
Sbjct: 391  LEKSNYVVKNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHRMLSI 450

Query: 1217 LSNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAAR 1038
            L +GIVIG KRF FLAFSASQLRSSSVWMF+SND + A+DIREWMGCF+ IRS+SKCAAR
Sbjct: 451  LRDGIVIGEKRFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAAR 510

Query: 1037 MGQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERM 858
            MGQLFSSS Q L VP QDVE IPD+E S+DG+ YCFSDGIGKISLSFA+ V++KC L++ 
Sbjct: 511  MGQLFSSSTQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQT 570

Query: 857  PWAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVT 678
            P AFQIRYGGYKGV+ VD  SFRKLSLR SM KF SKNRML +T  S  MPCYLNREI++
Sbjct: 571  PSAFQIRYGGYKGVIAVDCRSFRKLSLRSSMLKFESKNRMLNVTKWSDAMPCYLNREIIS 630

Query: 677  LLSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPS 498
            LLSTLG++DE F ALQ+ Q+ LL ++ T R  A+     +N  + K  L++MLL GYEP+
Sbjct: 631  LLSTLGVKDETFEALQEEQLRLLGKMRTERGAALNVFERLNGADSKNTLVKMLLHGYEPN 690

Query: 497  SEPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEEL 318
            +EPYL MML+ Y +  LSD++SR RIFVPKGR+L+GCLDET  LDYGQ YVR+TMT  E 
Sbjct: 691  AEPYLSMMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAEQ 750

Query: 317  QCGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQK 138
            + G Q FF  V + T +V GKVVVTKNPCLHPGD+RVL+AVY+ +LE K + DCL+FPQK
Sbjct: 751  EMGDQSFFQKVDETTLVVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEEKNMVDCLIFPQK 810

Query: 137  GERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            GERPHPNECSGGDLDGDL+F+ WD++L+P     PMDY ARRPRI
Sbjct: 811  GERPHPNECSGGDLDGDLFFISWDKDLVPSHTVPPMDYSARRPRI 855


>ref|XP_008239735.1| PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 2
            [Prunus mume]
          Length = 1100

 Score =  849 bits (2193), Expect = 0.0
 Identities = 421/704 (59%), Positives = 527/704 (74%), Gaps = 3/704 (0%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            L + F +++ S G  LG              P+I+ KIS P+  A     RY + K+ F+
Sbjct: 134  LEIAFENIMESFGCRLGGEKVNALLLKLKFGPRIFRKISGPNVAARFSTDRYHVCKDDFD 193

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKI-FSLEQVEQSCSS 1749
            FLWVRTT+FS +KSIG S +F W+++E  S SD+   FP Y+    +   L+  E+ CS 
Sbjct: 194  FLWVRTTDFSDMKSIGYSTSFCWEIEEEFSLSDVFECFPYYKDNDVVDLILDNGEKYCSP 253

Query: 1748 SDLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKL 1569
            S+ VPL++C SDSKLPYEILFQLN+LVH+QK+S+ A +SD+IE LS LS+D+   +L KL
Sbjct: 254  SETVPLVKCGSDSKLPYEILFQLNALVHSQKISLAATDSDLIEFLSGLSVDTTNVLLEKL 313

Query: 1568 RQVKSTSYEVISFIQRQLHA-SMGHKPSSSE-RKLKNNELMSCHRALITPTKIYLLGPEV 1395
             + K+T Y+  SF++ QLH     HK   S  ++L  + +MSCHR LITP+KI  LGPE+
Sbjct: 314  HKRKTTCYDPQSFLKMQLHVLERNHKSRPSPYKRLTEHNVMSCHRVLITPSKICCLGPEL 373

Query: 1394 ESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVL 1215
            E  NYVVK+FA   SDFMRVTFV+EDW KL ++A++TSI+QGIF+KP+RT IYHR+LS+L
Sbjct: 374  EKSNYVVKNFAAYASDFMRVTFVDEDWSKLPANAISTSIQQGIFAKPHRTGIYHRMLSIL 433

Query: 1214 SNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARM 1035
             +GIVIG K F FLAFSASQLRSSSVWMF+SND + A+DIREWMGCF+ IRS+SKCAARM
Sbjct: 434  RDGIVIGEKNFEFLAFSASQLRSSSVWMFSSNDNVKAEDIREWMGCFSKIRSISKCAARM 493

Query: 1034 GQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMP 855
            GQLFSSS Q L VP QDVE IPD+E S+DG+ YCFSDGIGKISLSFA+ V++KC L++ P
Sbjct: 494  GQLFSSSTQTLVVPAQDVEIIPDVETSSDGVTYCFSDGIGKISLSFARKVAQKCGLDQTP 553

Query: 854  WAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTL 675
             AFQIRYGGYKGV+ VD  SFRKLSLR SM KF SKN ML +T  S  MPCYLNREI++L
Sbjct: 554  SAFQIRYGGYKGVIAVDCRSFRKLSLRSSMLKFESKNTMLNVTKWSDAMPCYLNREIISL 613

Query: 674  LSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSS 495
            +STLG++DE F ALQ+ Q+ LL ++ T R  A+  L  +N  + K  L++MLL GYEP+ 
Sbjct: 614  MSTLGVKDETFEALQEEQLRLLGKMRTERGAALNVLERLNGADSKNTLVKMLLHGYEPNV 673

Query: 494  EPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQ 315
            EPYL MML+ Y +  LSD++SR RIFVPKGR+L+GCLDET  LDYGQ YVR+TMT  E +
Sbjct: 674  EPYLSMMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAEQE 733

Query: 314  CGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKG 135
             G Q FF  V + T IV GKVVVTKNPCLHPGD+RVL+AVY+ +LE K + DCL+FPQKG
Sbjct: 734  MGDQSFFQKVDETTCIVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEEKNMVDCLIFPQKG 793

Query: 134  ERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            ERPHPNECSGGDLDGDL+F+ WD++L+P     PMDY ARRPRI
Sbjct: 794  ERPHPNECSGGDLDGDLFFISWDKDLVPSHTVPPMDYSARRPRI 837


>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
            gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
            polymerase 2 isoform 1 [Theobroma cacao]
            gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
            2 isoform 1 [Theobroma cacao] gi|508773407|gb|EOY20663.1|
            RNA-dependent RNA polymerase 2 isoform 1 [Theobroma
            cacao]
          Length = 1149

 Score =  848 bits (2192), Expect = 0.0
 Identities = 426/704 (60%), Positives = 536/704 (76%), Gaps = 3/704 (0%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            L V F DV+ + G C               AP+IY K+S P+  + +   RY I KE+F+
Sbjct: 159  LEVLFDDVLETVGCCFNGSSCNALLLRVKYAPRIYQKVSGPNIASKLRPDRYHICKENFD 218

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSS 1746
            FLWVRTT+FS  K++G+S AF W+++      D+ + F  Y  + K  +L+   +  S+ 
Sbjct: 219  FLWVRTTDFSRTKAVGQSTAFYWEINAELLTLDLFSCFSCYREDMKGLTLKGGGEFSSAP 278

Query: 1745 DLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLR 1566
            ++VPL++ PSDSKL YEILFQLNSLVH QK+S+ +V++D+I+IL  L++++A  IL+K  
Sbjct: 279  EIVPLVKGPSDSKLAYEILFQLNSLVHTQKISIASVDTDLIDILRVLAVETAVMILQKFH 338

Query: 1565 QVKSTSYEVISFIQRQLHASMGH---KPSSSERKLKNNELMSCHRALITPTKIYLLGPEV 1395
            ++ ST Y  +SF++  L  S  +   +P SS ++L ++ +MSCHRAL+TP+KIY LGPE+
Sbjct: 339  KLLSTCYNPVSFVKENLPVSERNFQSRPLSSFKRLIDHNVMSCHRALVTPSKIYCLGPEL 398

Query: 1394 ESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVL 1215
            E+ NYVVK+FAE  SDFMRV+FVEEDWGKL ++A++TS++ GIFSKP+RT IYHRILSVL
Sbjct: 399  ETSNYVVKNFAEYASDFMRVSFVEEDWGKLSANAISTSVQLGIFSKPFRTKIYHRILSVL 458

Query: 1214 SNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARM 1035
             +GIVIG KRF FLAFSASQLRS+SVWMFASNDK++A+D+REWMGCF  IRSVSKCAARM
Sbjct: 459  QHGIVIGDKRFEFLAFSASQLRSNSVWMFASNDKVTAEDVREWMGCFKKIRSVSKCAARM 518

Query: 1034 GQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMP 855
            GQLFSSS   L VP QDV+ IPDIE ++DGI YCFSDGIGKISL FA+ V++KC L   P
Sbjct: 519  GQLFSSSLPTLVVPVQDVKIIPDIEVTSDGINYCFSDGIGKISLPFAREVAQKCGLNDTP 578

Query: 854  WAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTL 675
             AFQIRYGGYKGV+ VDRNSFRK+SLR SM KF SK RML +T  S+ MPC+LNREIVTL
Sbjct: 579  SAFQIRYGGYKGVVAVDRNSFRKMSLRGSMHKFESKIRMLNVTKWSESMPCFLNREIVTL 638

Query: 674  LSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSS 495
            LSTLGI+DE F  LQQ Q+HLL Q+LTNRE A+  L  +   + + IL++MLLQGYEP+ 
Sbjct: 639  LSTLGIKDEAFETLQQEQLHLLGQMLTNREAALDVLQSLCGADSQNILVKMLLQGYEPNV 698

Query: 494  EPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQ 315
            EPYL MML       LSD++ R RI+VPKG++L+GCLDETATL+YGQ YVR+++   EL+
Sbjct: 699  EPYLSMMLLANHVSLLSDLKCRCRIYVPKGQVLVGCLDETATLNYGQVYVRLSIKKAELE 758

Query: 314  CGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKG 135
               Q FFH V +KTAIV+GKVVVTKNPCLHPGD+RVL AVYE  LE KGL DCLVFPQKG
Sbjct: 759  HADQNFFHKVDEKTAIVIGKVVVTKNPCLHPGDVRVLEAVYEAELEDKGLVDCLVFPQKG 818

Query: 134  ERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            ERPHPNECSGGDLDGD +F+ WD++LIP + D PMDY   RPRI
Sbjct: 819  ERPHPNECSGGDLDGDQFFISWDKDLIPCQTDAPMDYTGSRPRI 862


>gb|KDO69723.1| hypothetical protein CISIN_1g001183mg [Citrus sinensis]
          Length = 1131

 Score =  847 bits (2188), Expect = 0.0
 Identities = 421/704 (59%), Positives = 535/704 (75%), Gaps = 5/704 (0%)
 Frame = -1

Query: 2099 VQFGDVISSAGYCLGXXXXXXXXXXXXXA-PKIYHKISKPDNGASVGNIRYSIFKESFEF 1923
            + F DV+ + G+ L                PKIY K+S P   +   + RY I KE F+F
Sbjct: 168  ILFEDVLETVGFSLDEGATVNGILFKLKYGPKIYQKVSGPHVASKFPSDRYHICKEDFDF 227

Query: 1922 LWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSSD 1743
             WVRTT+FS  KSIG S +F W++  G   SDI N FP Y+ +     LE+ E+ C++S+
Sbjct: 228  FWVRTTDFSVTKSIGCSTSFFWEIKNGLLASDISNIFPFYKEDKTDLILEEGEEFCTTSE 287

Query: 1742 LVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLRQ 1563
            +VPL++C     L +E+LFQLNSLVH QK+S++A ++++I+ILS LS+++A  +L+KL +
Sbjct: 288  IVPLVKCRPGFNLSHEVLFQLNSLVHNQKVSLVAADAELIQILSGLSMETALMVLQKLHK 347

Query: 1562 VKSTSYEVISFIQRQLHASMGHK----PSSSERKLKNNELMSCHRALITPTKIYLLGPEV 1395
            +KS  Y+ +SF++ QLH  +G      P SS ++L ++ +MSC+RAL+TP KIY LGPE+
Sbjct: 348  LKSICYDPVSFVKTQLHV-LGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGPEL 406

Query: 1394 ESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVL 1215
            E+ NYVVK+FA+  SDFMRVTFVEEDW KL ++A++TSI++GIFSKPYRT IY RIL++L
Sbjct: 407  ETSNYVVKNFAKYASDFMRVTFVEEDWSKLPANALSTSIQRGIFSKPYRTKIYSRILTIL 466

Query: 1214 SNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARM 1035
             +GIVIG K + FLAFSASQLR++SVWMFASND++SA+D+R WMGCFN IRSVSKCAARM
Sbjct: 467  QDGIVIGDKHYEFLAFSASQLRNNSVWMFASNDEVSAEDVRGWMGCFNKIRSVSKCAARM 526

Query: 1034 GQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMP 855
            GQLFSSSKQ L VP QDVE IPD+E ++DG  YCFSDGIGKISLSFA+ V++KC L   P
Sbjct: 527  GQLFSSSKQTLVVPVQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHTP 586

Query: 854  WAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTL 675
             AFQIRYGGYKGV+ VDRNSFRKLSLR SM KF S+NRML +T  S+ MPC+LNREI++L
Sbjct: 587  SAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIISL 646

Query: 674  LSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSS 495
            LSTLG++DE F A+QQ Q+ LL ++L NRE A+  L  +N  + K IL++MLLQGYEP+ 
Sbjct: 647  LSTLGVKDEVFEAMQQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEPNV 706

Query: 494  EPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQ 315
            EPYL MML  + + QLSD++SR RI+VPKGRLLIGC DET  L+YGQ +VRVTMT EEL+
Sbjct: 707  EPYLSMMLLSHHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELE 766

Query: 314  CGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKG 135
               Q FFH V DKT+IV GKV+VTKNPCLHPGD+RVL AVYE  LE K   DC++FPQKG
Sbjct: 767  SKDQSFFHRVDDKTSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQKG 826

Query: 134  ERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            ERPHPNECSGGDLDGD++F+ WD +LIP   + PMDY  RR RI
Sbjct: 827  ERPHPNECSGGDLDGDIFFISWDNDLIPCETEPPMDYTGRRSRI 870


>ref|XP_010271987.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nelumbo nucifera]
            gi|720051127|ref|XP_010271988.1| PREDICTED: RNA-dependent
            RNA polymerase 2 [Nelumbo nucifera]
          Length = 1115

 Score =  846 bits (2186), Expect = 0.0
 Identities = 439/705 (62%), Positives = 527/705 (74%), Gaps = 4/705 (0%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            L + F DV +++GY L              APKIY KIS     +     RY I KE  E
Sbjct: 151  LEINFSDVFTASGYRLRGRQSNALLLRLRYAPKIYQKISGSTVASKFSTDRYHICKEDVE 210

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSS 1746
            FLWVRTT+FS   SIG S +F W+L+EG   SDI+ +FP Y+ E     +E+ EQ C  S
Sbjct: 211  FLWVRTTDFSESNSIGWSSSFCWELEEGLLSSDILRSFPYYKEELGDLIVEKEEQFCCES 270

Query: 1745 DLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSD-VIEILSSLSLDSATRILRKL 1569
            +LVPLI    DS L YEIL+QLNSLVH QK+S+ AV SD +IEIL  LS+D+A   L +L
Sbjct: 271  ELVPLINSGLDSTLAYEILYQLNSLVHTQKVSLRAVKSDDLIEILCCLSVDTANGFLLQL 330

Query: 1568 RQVKSTSYEVISFIQRQLHASMGHKPS---SSERKLKNNELMSCHRALITPTKIYLLGPE 1398
             ++KST Y+ +  IQRQL + + ++ S   SS+R L+   LMSCHR L+TPTKIY LGPE
Sbjct: 331  HKMKSTCYDPLPIIQRQLSSLLRNQKSLLSSSQRGLREGNLMSCHRVLVTPTKIYCLGPE 390

Query: 1397 VESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSV 1218
            +E  N VV+H+A   SDF+RV+FVEEDW KL S A++TSIE+GIFSKPYRT IY+RILS+
Sbjct: 391  LEKSNCVVRHYAAYSSDFLRVSFVEEDWTKLHSGALSTSIEEGIFSKPYRTRIYYRILSI 450

Query: 1217 LSNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAAR 1038
            L +GI IG KRF FLAFSASQLRS+SVWMFASN+ + A++IREWMG FN IRSVSKCAAR
Sbjct: 451  LRDGIKIGAKRFEFLAFSASQLRSNSVWMFASNETVKAENIREWMGSFNKIRSVSKCAAR 510

Query: 1037 MGQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERM 858
            MGQLFSSS +A  V    VE IPD+E + DGI+YCFSDGIGKIS SFA+ V++KC L + 
Sbjct: 511  MGQLFSSSVEASKVQAHHVEIIPDVEITRDGIQYCFSDGIGKISQSFAREVAQKCGLSQT 570

Query: 857  PWAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVT 678
            P AFQIRYGGYKGV+ VDRNSF KLSLR SM KF S +R L +T  S+ MPCYLNREIV+
Sbjct: 571  PSAFQIRYGGYKGVIAVDRNSFCKLSLRPSMLKFDSNDRTLNVTKWSESMPCYLNREIVS 630

Query: 677  LLSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPS 498
            LLSTLG+EDEKF  LQ  QI LLD++LTNRE A+  L    AG+ K +L++MLL GYEP 
Sbjct: 631  LLSTLGVEDEKFEMLQCKQISLLDKMLTNREAALDVL-ECTAGDAKTVLVKMLLHGYEPG 689

Query: 497  SEPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEEL 318
             EPYL M+LR +R+ QLSDIRS+ RI VPKGR+L+GCLDET  L+YGQ ++RVTMT  E 
Sbjct: 690  VEPYLSMILRAHREHQLSDIRSKCRILVPKGRVLLGCLDETGILNYGQVFIRVTMTKAEQ 749

Query: 317  QCGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQK 138
                Q FFH V + T+IV+GKVV+TKNPCLHPGDIRVL+A+YE  LE KGL DCLVFPQK
Sbjct: 750  CHDDQSFFHQVDETTSIVIGKVVITKNPCLHPGDIRVLDAIYESALEEKGLVDCLVFPQK 809

Query: 137  GERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            GERPHPNECSGGDLDGDL+FVCWDENLIP + DTPMDYI RR R+
Sbjct: 810  GERPHPNECSGGDLDGDLFFVCWDENLIPSQTDTPMDYIGRRSRL 854


>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
          Length = 1131

 Score =  844 bits (2181), Expect = 0.0
 Identities = 418/704 (59%), Positives = 535/704 (75%), Gaps = 5/704 (0%)
 Frame = -1

Query: 2099 VQFGDVISSAGYCLGXXXXXXXXXXXXXA-PKIYHKISKPDNGASVGNIRYSIFKESFEF 1923
            + F DV+ + G+ L                PKIY K+S P   +   + RY I KE F+F
Sbjct: 168  ILFEDVLETVGFSLDEGATVNGILFKLKYGPKIYQKVSGPHVASKFPSDRYHICKEDFDF 227

Query: 1922 LWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSSD 1743
             WVRTT+FS  KSIG S +F W++  G   SDI N FP Y+ +     LE+ E+ C++S+
Sbjct: 228  FWVRTTDFSVTKSIGCSTSFFWEIKNGLLASDISNIFPFYKEDKTDLILEEGEEFCTTSE 287

Query: 1742 LVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLRQ 1563
            +VPL++C     L +E+LFQLNSLVH QK+S++A ++++I+IL+ LS+++A  +L+KL +
Sbjct: 288  IVPLVKCRPGFNLSHEVLFQLNSLVHNQKVSLVAADAELIQILNGLSMETALMVLQKLHK 347

Query: 1562 VKSTSYEVISFIQRQLHASMGHK----PSSSERKLKNNELMSCHRALITPTKIYLLGPEV 1395
            +KS  Y+ +SF++ QLH  +G      P SS ++L ++ +MSC+RAL+TP KIY LGPE+
Sbjct: 348  LKSICYDPVSFVKTQLHV-LGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGPEL 406

Query: 1394 ESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVL 1215
            E+ NYVVK+FA+  SDFMRVTFVEEDW KL ++A++TSI++GIF+KPYRT IY RIL++L
Sbjct: 407  ETSNYVVKNFAKYASDFMRVTFVEEDWSKLPANALSTSIQRGIFAKPYRTKIYSRILTIL 466

Query: 1214 SNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARM 1035
             +GIVIG K + FLAFSASQLR++SVWMFASND++SA+D+REWMGCFN I SVSKCAARM
Sbjct: 467  QDGIVIGDKHYEFLAFSASQLRNNSVWMFASNDEVSAEDVREWMGCFNKIHSVSKCAARM 526

Query: 1034 GQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMP 855
            GQLFSSSKQ L VP QDVE IPD+E ++DG  YCFSDGIGKISLSFA+ V++KC L   P
Sbjct: 527  GQLFSSSKQTLVVPVQDVEMIPDVEVTSDGNTYCFSDGIGKISLSFARQVAQKCGLSHTP 586

Query: 854  WAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTL 675
             AFQIRYGGYKGV+ VDRNSFRKLSLR SM KF S+NRML +T  S+ MPC+LNREI++L
Sbjct: 587  SAFQIRYGGYKGVIAVDRNSFRKLSLRRSMLKFESRNRMLNVTKWSESMPCFLNREIISL 646

Query: 674  LSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSS 495
            LSTLG++D+ F A+QQ Q+ LL ++L NRE A+  L  +N  + K IL++MLLQGYEP+ 
Sbjct: 647  LSTLGVKDDVFEAMQQQQLILLGKMLINREAALDVLQKLNGVDSKNILVKMLLQGYEPNV 706

Query: 494  EPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQ 315
            EPYL MML  + + QLSD++SR RI+VPKGRLLIGC DET  L+YGQ +VRVTMT EEL+
Sbjct: 707  EPYLSMMLLSHHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELE 766

Query: 314  CGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKG 135
               Q FFH V DKT+IV GKV+VTKNPCLHPGD+RVL AVYE  LE K   DC++FPQKG
Sbjct: 767  SKDQSFFHRVDDKTSIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQKG 826

Query: 134  ERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            ERPHPNECSGGDLDGD++F+ WD +LIP   + PMDY  RR RI
Sbjct: 827  ERPHPNECSGGDLDGDIFFISWDNDLIPCETEPPMDYTGRRSRI 870


>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
          Length = 1119

 Score =  844 bits (2180), Expect = 0.0
 Identities = 426/704 (60%), Positives = 526/704 (74%), Gaps = 3/704 (0%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            L VQFGDV+  A  C               APK+Y ++S P   +     RY I KE  E
Sbjct: 154  LEVQFGDVVE-ATVCSLENQKSALLLKLKHAPKLYQRVSGPAVASKFSADRYHICKEDCE 212

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSS 1746
            FLWVRTT+FS +KSIG S +  W+ ++G   SD++++ P    +     L++V    S S
Sbjct: 213  FLWVRTTDFSNIKSIGCSSSLCWETEDGWLSSDLLSSLPCCNKDVIDLDLDKVGDIYSGS 272

Query: 1745 DLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLR 1566
            + VPL+R PSD KLPYEILFQLNSLV  QK+S+ AVN D+IE+LS L LD+A  IL+K+ 
Sbjct: 273  EFVPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAVNPDLIEVLSKLELDTAMMILQKMH 332

Query: 1565 QVKSTSYEVISFIQRQLHA---SMGHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEV 1395
            +++ST +E ++FI+ +LH    +  ++ SSS  +L N+ +MS HR L+TP+KIY LGPE+
Sbjct: 333  KLQSTCFEPLTFIKTRLHVLGKNNKNQLSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPEL 392

Query: 1394 ESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVL 1215
            E+ NY+VK+FAE  SDF+RVTFVEEDWGKL  +AV+ S+EQGIF+KPYRT IYHRILS+L
Sbjct: 393  ETSNYIVKNFAEHASDFLRVTFVEEDWGKLFPNAVSMSVEQGIFAKPYRTKIYHRILSIL 452

Query: 1214 SNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARM 1035
              GIVIGTKRF FLAFSASQLRS+SVWMFASN+ + A+DIREWMGCFN IRS+SKCAARM
Sbjct: 453  REGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAARM 512

Query: 1034 GQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMP 855
            GQLFS+S Q ++V  Q VE +PDIE ++DG+ YCFSDGIGKIS +FA+ V++KC L   P
Sbjct: 513  GQLFSTSVQTMEVQLQHVEILPDIEVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHTP 572

Query: 854  WAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTL 675
             AFQIRYGGYKGV+ VDRNSFRKLSLR SM KF SKNRML IT  S  MPCYLNREIV L
Sbjct: 573  SAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVIL 632

Query: 674  LSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSS 495
            LSTLG+ED+    L    + LL ++LT  E A+  L  M  G++K+IL++MLLQGY P+ 
Sbjct: 633  LSTLGVEDKALEDLLDNHLRLLGKMLTTNEAALDVLESMGGGDVKKILMRMLLQGYAPNR 692

Query: 494  EPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQ 315
            EPYL MML+ + + Q+SD+RSR RIF+PKGR+L+GCLDET  L YG+ YVR+TMT  ELQ
Sbjct: 693  EPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGEVYVRITMTKAELQ 752

Query: 314  CGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKG 135
             G Q FF  V + TA+V GKVVVTKNPCLHPGD+RVL AVYE  LE K   DC++FPQ G
Sbjct: 753  NGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQNG 812

Query: 134  ERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            ERPHPNECSGGDLDGDLYF+CWDE+LIP +  TPMDY  RRPRI
Sbjct: 813  ERPHPNECSGGDLDGDLYFICWDESLIPHQTVTPMDYTGRRPRI 856


>ref|XP_008453109.1| PREDICTED: RNA-dependent RNA polymerase 2 [Cucumis melo]
          Length = 1117

 Score =  843 bits (2179), Expect = 0.0
 Identities = 412/704 (58%), Positives = 530/704 (75%), Gaps = 3/704 (0%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            L V F +++ + GYCLG             AP+IY KIS  +  +   + RY +  E ++
Sbjct: 152  LEVMFEEILETTGYCLGEEKLNALLFKLKYAPRIYKKISGSNMASKFSSTRYRLCVEDYD 211

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSS 1746
            +LWVRTTEFS ++S+G+S +F W+++E    SDI + FP Y+   K   LE  E+ CS+S
Sbjct: 212  YLWVRTTEFSPMRSVGQSTSFCWEVEEDLQASDIFSYFPFYKETQKDIVLEDGEEFCSTS 271

Query: 1745 DLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLR 1566
            ++VPLI+    S L YE+ +QLNSLVH QK+S+ A N D+I+ L +L +D+A  +L++L 
Sbjct: 272  EIVPLIKSGLGSNLAYEVEYQLNSLVHMQKISLAAANQDLIDFLCTLDIDTALNVLQRLH 331

Query: 1565 QVKSTSYEVISFIQRQLHA---SMGHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEV 1395
            Q+K   Y+ +SF++ QLH    +    P SS+++L NN +M+C+R L+TP++IY LGPE+
Sbjct: 332  QLKFICYDPLSFLKTQLHVFKRNCKSLPLSSQKRLSNN-VMNCYRVLVTPSRIYCLGPEL 390

Query: 1394 ESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVL 1215
            E+ NYVVK+F+   SDFMRVTFVEEDW KL + AVTTSI++GI SKPYRT+IYHRI+++L
Sbjct: 391  ETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTNIYHRIVTIL 450

Query: 1214 SNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARM 1035
             +GIVIG KRF FLAFSASQLRS+SVWMFAS+D + A++IR+WMGCF  IRS+SKCAARM
Sbjct: 451  RDGIVIGAKRFEFLAFSASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARM 510

Query: 1034 GQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMP 855
            GQLFSSS Q L VP QDVE IPDIE ++DGI YCFSDGIGKISLSFA+ V+ KC +  +P
Sbjct: 511  GQLFSSSTQTLVVPTQDVEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGVNHIP 570

Query: 854  WAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTL 675
             AFQIRYGGYKGV+ VDRNSFRKLSLR+SM KF SKN+ML +T C   MPCYLNREIVTL
Sbjct: 571  SAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIVTL 630

Query: 674  LSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSS 495
            LSTLG++DE F ALQQ Q+HLL ++LT++ VA+  L  ++  +   IL+QML  GYEP+ 
Sbjct: 631  LSTLGVKDESFEALQQEQLHLLKRMLTDKAVALNVLENLHGADSNNILVQMLNHGYEPNI 690

Query: 494  EPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQ 315
            EPYL MML+ +     SD+RSR RIFVPKGR+L+GCLDET  L+YGQ Y  +T+T  ELQ
Sbjct: 691  EPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQ 750

Query: 314  CGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKG 135
              +Q +FH + +  +I++GKVVVTKNPCLHPGD+RVL A++   LE KGL DCL+FPQKG
Sbjct: 751  NRNQNYFHTIDETKSILIGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKG 810

Query: 134  ERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
             RPH NECSGGDLDGDLYF+ WDENLIP + + PMDY  RRPRI
Sbjct: 811  PRPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRI 854


>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2 [Solanum lycopersicum]
          Length = 1119

 Score =  843 bits (2177), Expect = 0.0
 Identities = 424/704 (60%), Positives = 523/704 (74%), Gaps = 3/704 (0%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            L VQFGDV      C               APK+Y ++S P   +     RY I KE  E
Sbjct: 154  LEVQFGDVTEGT-LCSVENQKSALLLKLKHAPKLYQRVSGPAVASKFSADRYHICKEDCE 212

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSS 1746
            FLW+RTT+FS +KSIG S +  W+ ++G   SD+ ++ P    +     L++V    S S
Sbjct: 213  FLWIRTTDFSNIKSIGCSSSLCWETEDGWLSSDLFSSLPCCNQDVIDLDLDKVGDIYSGS 272

Query: 1745 DLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLR 1566
            + VPL+R PSD KLPYEILFQLNSLV  QK+S+ A+N ++IE+LS L LD+A  IL+K+ 
Sbjct: 273  EFVPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAINPNLIEVLSKLELDTAMMILQKMH 332

Query: 1565 QVKSTSYEVISFIQRQLHA---SMGHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEV 1395
            +++S  ++ + FI+ +LH    +  ++PSSS  +L N+ +MS HR L+TP+KIY LGPE+
Sbjct: 333  KLQSICFDPLLFIKTRLHVLGKNNKNRPSSSYSRLVNHSMMSVHRVLVTPSKIYCLGPEL 392

Query: 1394 ESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVL 1215
            E+ NY+VK+FA   SDF+RVTFVEEDWGKL  +AV+ S+EQGIF+KPYRT IYHRILS+L
Sbjct: 393  ETSNYIVKNFASHASDFLRVTFVEEDWGKLFPNAVSMSVEQGIFAKPYRTKIYHRILSIL 452

Query: 1214 SNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARM 1035
              GIVIGTKRF FLAFSASQLRS+SVWMFASN+ + A+DIREWMGCFN IRS+SKCAARM
Sbjct: 453  REGIVIGTKRFFFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSISKCAARM 512

Query: 1034 GQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMP 855
            GQLFS+S Q ++V  Q VE +PDIE ++DG+ YCFSDGIGKIS +FA+ V++KC L   P
Sbjct: 513  GQLFSTSVQTMEVKLQHVEILPDIEVTSDGVSYCFSDGIGKISQAFARQVAQKCGLNHTP 572

Query: 854  WAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTL 675
             AFQIRYGGYKGV+ VDRNSFRKLSLR SM KF SKNRML IT  S  MPCYLNREIV L
Sbjct: 573  SAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVIL 632

Query: 674  LSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSS 495
            LSTLG+ED+ F  L    + LL ++LT  E A+  L  M  GE+K+IL++MLLQGY P+ 
Sbjct: 633  LSTLGVEDKAFEDLLDNHLCLLGKMLTTNEAALDVLESMGGGEVKKILMRMLLQGYAPNQ 692

Query: 494  EPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQ 315
            EPYL MML+ + + Q+SD+RSR RIF+PKGR+L+GCLDET  L YGQ YVR+TMT  ELQ
Sbjct: 693  EPYLSMMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGQVYVRITMTKAELQ 752

Query: 314  CGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKG 135
             G Q FF  V + TA+V GKVVVTKNPCLHPGD+RVL AVYE  LE K   DC++FPQKG
Sbjct: 753  NGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQKG 812

Query: 134  ERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            ERPHPNECSGGDLDGDLYF+CWDE+LIP +  TPMDY  RRPRI
Sbjct: 813  ERPHPNECSGGDLDGDLYFICWDESLIPCQTVTPMDYTGRRPRI 856


>ref|XP_009796585.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris]
          Length = 1120

 Score =  842 bits (2175), Expect = 0.0
 Identities = 420/704 (59%), Positives = 525/704 (74%), Gaps = 3/704 (0%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            L VQFGD+I + G C               APK+Y ++S P   +   + RY + KE  E
Sbjct: 155  LEVQFGDIIETCG-CSLEDEKPALLLKLKHAPKLYQRVSGPGVASKFSSDRYHVCKEDCE 213

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSS 1746
            FLWVRTT+FSA+KSIG S +  W++++G   SD++++ P    +     L++V    S+S
Sbjct: 214  FLWVRTTDFSAMKSIGCSSSLCWEIEDGLLNSDLLSSLPYCNNDVMDLVLDEVGDIYSAS 273

Query: 1745 DLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLR 1566
            +LVPL   PSD KLPYEILFQLNSLVH+ K+S+ AV +D+IE+LS L LD+A  IL+K+ 
Sbjct: 274  ELVPLASFPSDLKLPYEILFQLNSLVHSHKISLGAVKTDLIEVLSKLELDTAMMILQKMH 333

Query: 1565 QVKSTSYEVISFIQRQLHA---SMGHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEV 1395
            +++ST +E + FI+ +LH    +  ++PSSS  +L N  +MS HR L+TP+K+Y LGPE+
Sbjct: 334  KLQSTCFEPVPFIKTRLHVLGKTSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGPEL 393

Query: 1394 ESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVL 1215
            E+ NY+VK+FA   SDF+RVTFVEEDW KL  +A++ S+EQGIF+KPYRT IYHRILS+L
Sbjct: 394  ETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISMSVEQGIFAKPYRTKIYHRILSIL 453

Query: 1214 SNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARM 1035
             +G+ IGTK+F FLAFSASQLRS+SVWMFASN+ + A+DIREWMGCFN IRSVSKCAARM
Sbjct: 454  RDGLDIGTKKFLFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGCFNKIRSVSKCAARM 513

Query: 1034 GQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMP 855
            GQLFS+S Q ++V    VE +PDIE ++DG+ YCFSDGIGKIS +FA  V++KC L   P
Sbjct: 514  GQLFSTSFQTMEVQSPHVEILPDIEVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYTP 573

Query: 854  WAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTL 675
             AFQIRYGGYKGV+ VDRNSFRKLSLR SM KF SKNRML IT  S  MPCYLNREIV L
Sbjct: 574  SAFQIRYGGYKGVIAVDRNSFRKLSLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVIL 633

Query: 674  LSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSS 495
            LSTLG+ED+    L    +HLL ++LT  E A+  L  +  G++KRIL++ML QGY P+ 
Sbjct: 634  LSTLGVEDKVLEDLLDNHLHLLGKMLTTNEAALDVLESIGGGDVKRILMRMLHQGYAPNL 693

Query: 494  EPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQ 315
            EPYL MML+ + + QLSD+RSR RIF+PKGR+L+GCLDET  L+YGQ Y R+TMT  ELQ
Sbjct: 694  EPYLSMMLQSHFENQLSDLRSRCRIFIPKGRVLVGCLDETGILNYGQVYARITMTKAELQ 753

Query: 314  CGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKG 135
             G Q FF  V + TA+V GKVVVTKNPCLHPGD+RVL AVYE  LE K   DC++FPQKG
Sbjct: 754  SGQQNFFQQVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKG 813

Query: 134  ERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            ERPHPNECSGGDLDGDLYF+ W ENLIP +  TPMDY  RRPRI
Sbjct: 814  ERPHPNECSGGDLDGDLYFISWAENLIPRQTVTPMDYTGRRPRI 857


>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
            gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
            2 [Cucumis sativus] gi|700208501|gb|KGN63597.1|
            hypothetical protein Csa_1G005580 [Cucumis sativus]
          Length = 1117

 Score =  840 bits (2170), Expect = 0.0
 Identities = 411/704 (58%), Positives = 528/704 (75%), Gaps = 3/704 (0%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            L V F +++ + G+CLG             AP+IY KIS  +  +   + RY +  E ++
Sbjct: 152  LEVMFEEILETTGHCLGEEKLNALLLKLKYAPRIYKKISGSNMASRFSSTRYRLCIEDYD 211

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSS 1746
            +LWVRTTEFS ++S+G+S +F W+++E    SDI + FP Y+   K   LE  E+ CS+S
Sbjct: 212  YLWVRTTEFSPMRSVGQSTSFCWEVEEDLQASDIFSCFPFYKETQKDIVLEDGEEFCSTS 271

Query: 1745 DLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLR 1566
            ++VPLI+    S L YE+ +QLNSLVH QK+S+ A N D+I+ L +L +D+A  +L++L 
Sbjct: 272  EIVPLIKSGLGSNLAYEVEYQLNSLVHMQKISLSAANQDLIDFLCTLDIDTALNVLQRLH 331

Query: 1565 QVKSTSYEVISFIQRQLHA---SMGHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEV 1395
            Q+K   Y+ +SF++ QLH    +    P SS+++L NN +M+C+R L+TP++IY LGPE+
Sbjct: 332  QLKFVCYDPLSFLKTQLHVYKRNCKSLPPSSQKRLSNN-VMNCYRVLVTPSRIYCLGPEL 390

Query: 1394 ESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVL 1215
            E+ NYVVK+F+   SDFMRVTFVEEDW KL + AVTTSI++GI SKPYRT IYHRI++VL
Sbjct: 391  ETSNYVVKNFSSYASDFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVL 450

Query: 1214 SNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARM 1035
             +GIVIG KRF FLAFSASQLRS+SVWMFAS+D + A++IR+WMGCF  IRS+SKCAARM
Sbjct: 451  RDGIVIGAKRFEFLAFSASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARM 510

Query: 1034 GQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMP 855
            GQLFSSS Q L VP +DVE IPDIE +TDGI YCFSDGIGKISLSFA+ V+ KC +  +P
Sbjct: 511  GQLFSSSTQTLVVPTRDVEIIPDIEVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHIP 570

Query: 854  WAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTL 675
             AFQIRYGGYKGV+ VDRNSFRKLSLR+SM KF SKN+ML +T C   MPCYLNREI TL
Sbjct: 571  SAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIATL 630

Query: 674  LSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSS 495
            LSTLG++DE F ALQQ Q+HLL ++LT+++VA+  L   +  +   IL+QML  GYEP+ 
Sbjct: 631  LSTLGVKDESFEALQQEQLHLLKRMLTDKDVALNVLENFHGADSNNILVQMLNHGYEPNI 690

Query: 494  EPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQ 315
            EPYL MML+ +     SD+RSR RIFVPKGR+L+GCLDET  L+YGQ Y  +T+T  ELQ
Sbjct: 691  EPYLSMMLQAHYWNLFSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQ 750

Query: 314  CGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKG 135
              +Q +FH + +  +I++GKVVVTKNPCLHPGD+RVL A++   LE KGL DCL+FPQKG
Sbjct: 751  SRNQNYFHTIDETKSILLGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKG 810

Query: 134  ERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
             RPH NECSGGDLDGDLYF+ WDENLIP + + PMDY  RRPRI
Sbjct: 811  ARPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRI 854


>ref|XP_009623301.1| PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana tomentosiformis]
          Length = 1120

 Score =  838 bits (2165), Expect = 0.0
 Identities = 417/704 (59%), Positives = 525/704 (74%), Gaps = 3/704 (0%)
 Frame = -1

Query: 2105 LVVQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFE 1926
            L VQFGD+I + G C               APK+Y ++S P   +   + RY + KE  E
Sbjct: 155  LEVQFGDIIETCG-CSLEDEKPALLLKLKHAPKLYQRVSGPGVASKFSSDRYHVCKEDCE 213

Query: 1925 FLWVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSS 1746
            FLWVRTT+FSA+KSIG S +  W++++G   SD++++ P    +     L++V    S+S
Sbjct: 214  FLWVRTTDFSAMKSIGCSSSLCWEIEDGLLSSDLLSSLPYCNNDVMDLVLDEVGDIYSAS 273

Query: 1745 DLVPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLR 1566
            +LVPL   PSD KLPYEILFQLNSLVH  K+S+ AV +D+IE+LS L LD+A  IL+K+ 
Sbjct: 274  ELVPLASFPSDLKLPYEILFQLNSLVHTHKISLGAVKTDLIEVLSKLELDTAMMILQKMH 333

Query: 1565 QVKSTSYEVISFIQRQLHA---SMGHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEV 1395
            +++S+ +E + FI+ +LH    +  ++PSSS  +L N  +MS HR L+TP+K+Y LGPE+
Sbjct: 334  KLQSSCFEPVPFIKTRLHVLGKNSKNQPSSSYSRLVNQNMMSVHRVLVTPSKVYCLGPEL 393

Query: 1394 ESWNYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVL 1215
            E+ NY+VK+FA   SDF+RVTFVEEDW KL  +A++ S+EQGIF+KPYRT IYHRILS+L
Sbjct: 394  ETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISISVEQGIFAKPYRTKIYHRILSIL 453

Query: 1214 SNGIVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARM 1035
             +G+VIGTKRF FLAFSASQLRS+SVWMFASN+ + A+DIREWMG FN IRSVSKCAARM
Sbjct: 454  RDGLVIGTKRFLFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGYFNKIRSVSKCAARM 513

Query: 1034 GQLFSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMP 855
            GQLFS+S Q ++V    VE +PDIE ++DG+ YCFSDGIGKIS +FA  V++KC L   P
Sbjct: 514  GQLFSTSFQTMEVQSPHVEILPDIEVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYTP 573

Query: 854  WAFQIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTL 675
             AFQIRYGGYKGV+ VDRNS+RKLSLR SM KF SKN+ML IT  S  MPCYLNREIV L
Sbjct: 574  SAFQIRYGGYKGVIAVDRNSYRKLSLRGSMLKFESKNKMLNITKWSDAMPCYLNREIVIL 633

Query: 674  LSTLGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSS 495
            L+TLG+ED+    L    +HLL ++LT  E A+  L  +  G++KRIL++ML QGY P+ 
Sbjct: 634  LATLGVEDKVLEDLLDNHLHLLGKMLTTNEAALDVLESIGGGDVKRILMRMLHQGYAPNL 693

Query: 494  EPYLFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQ 315
            EPYL MML+ + + QLSD+RSR RIF+PKGR+L+GCLDET  L+YGQ Y R+TMT  ELQ
Sbjct: 694  EPYLSMMLQSHFENQLSDLRSRCRIFIPKGRVLVGCLDETGILNYGQVYARITMTKAELQ 753

Query: 314  CGSQPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKG 135
             G Q FF  V + TA+V GKVVVTKNPCLHPGD+RVL AVYE  LE K   DC++FPQKG
Sbjct: 754  SGQQNFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKG 813

Query: 134  ERPHPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPRI 3
            ERPHPNECSGGDLDGDLYF+ WDENLIP +  TPMDY  R+PRI
Sbjct: 814  ERPHPNECSGGDLDGDLYFISWDENLIPRQTVTPMDYTGRKPRI 857


>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2 [Fragaria vesca subsp.
            vesca]
          Length = 1136

 Score =  838 bits (2164), Expect = 0.0
 Identities = 413/700 (59%), Positives = 517/700 (73%), Gaps = 2/700 (0%)
 Frame = -1

Query: 2099 VQFGDVISSAGYCLGXXXXXXXXXXXXXAPKIYHKISKPDNGASVGNIRYSIFKESFEFL 1920
            + F +++ S G CLG              PKI+ ++S P+  +     RY + KE F++L
Sbjct: 157  IAFENIVESVGCCLGGDKVNALRLKLKFGPKIFRQLSGPNVASKFSADRYHVCKEDFDYL 216

Query: 1919 WVRTTEFSALKSIGKSFAFVWQLDEGTSFSDIINNFPRYEGESKIFSLEQVEQSCSSSDL 1740
            WVR T+FS +KSIG S AF W++ E  + + +   FP +  +      E        S+ 
Sbjct: 217  WVRCTDFSEMKSIGHSTAFCWEIQEDVAAAGVFTTFPSFRKDVVDLMFEDGGDCLLVSET 276

Query: 1739 VPLIRCPSDSKLPYEILFQLNSLVHAQKLSVLAVNSDVIEILSSLSLDSATRILRKLRQV 1560
            VPL++C +D K PYEILFQLN LVHAQK+S+ AV SD+IE    LS+D+A  +L KL+++
Sbjct: 277  VPLVKCEADMKFPYEILFQLNVLVHAQKISLAAVGSDLIEFFGGLSMDTANVLLEKLQKL 336

Query: 1559 KSTSYEVISFI--QRQLHASMGHKPSSSERKLKNNELMSCHRALITPTKIYLLGPEVESW 1386
            K+T Y+ +SF+  Q QL      K  S  ++L  + +MSCHR LITP+KIY LGPE+E  
Sbjct: 337  KTTCYDPLSFVKVQLQLLERNSKKRLSPHQRLMEHNVMSCHRVLITPSKIYCLGPELEKS 396

Query: 1385 NYVVKHFAERVSDFMRVTFVEEDWGKLQSDAVTTSIEQGIFSKPYRTSIYHRILSVLSNG 1206
            NYVVK+FA+  SDFMRVTFVEEDWGKL  +A++TSIEQG F+KP+RT IY RILS+L +G
Sbjct: 397  NYVVKNFAQYASDFMRVTFVEEDWGKLPVNALSTSIEQGFFAKPFRTGIYQRILSILRDG 456

Query: 1205 IVIGTKRFAFLAFSASQLRSSSVWMFASNDKISAKDIREWMGCFNSIRSVSKCAARMGQL 1026
            IVIG KRF FLAFSASQLRS+SVWMFASND + A+DIR+WMGCFN IRSVSKCAARMGQL
Sbjct: 457  IVIGDKRFEFLAFSASQLRSNSVWMFASNDSVKAEDIRDWMGCFNKIRSVSKCAARMGQL 516

Query: 1025 FSSSKQALDVPQQDVETIPDIEASTDGIKYCFSDGIGKISLSFAKTVSKKCELERMPWAF 846
            FSSS Q L VPQ+DVE IPDIE +TDG+ YCFSDGIGKISLSFA+ V++KC L   P AF
Sbjct: 517  FSSSTQTLTVPQKDVELIPDIETTTDGVSYCFSDGIGKISLSFARQVAQKCGLNDTPSAF 576

Query: 845  QIRYGGYKGVLVVDRNSFRKLSLRESMKKFSSKNRMLCITSCSQWMPCYLNREIVTLLST 666
            QIRYGGYKGV+ VDRNSFRKLSLR SM KF S NRML +T  S  MPC+LNREI+TL+ST
Sbjct: 577  QIRYGGYKGVIAVDRNSFRKLSLRSSMLKFDSDNRMLNVTKWSSSMPCFLNREIITLMST 636

Query: 665  LGIEDEKFIALQQAQIHLLDQILTNREVAIRGLGGMNAGEIKRILLQMLLQGYEPSSEPY 486
            LG+EDE F ALQQ Q+ LL ++  +R VA+  L  ++  +   IL+++LLQGYEP+ EPY
Sbjct: 637  LGVEDEAFEALQQEQLDLLGRMRKDRNVALSSLEKLSGADSNNILVKLLLQGYEPNLEPY 696

Query: 485  LFMMLREYRDQQLSDIRSRSRIFVPKGRLLIGCLDETATLDYGQAYVRVTMTVEELQCGS 306
            L MML+ + +  L+D++SR R++VPKGR+L+GCLDET TL+YGQ Y+R+TMT  E + G 
Sbjct: 697  LSMMLQAHYEHHLADLKSRCRMYVPKGRILVGCLDETGTLNYGQVYLRITMTKAEQEMGH 756

Query: 305  QPFFHMVKDKTAIVVGKVVVTKNPCLHPGDIRVLNAVYEPLLEAKGLTDCLVFPQKGERP 126
            Q FF  V + T IV GKVVVTKNPCLHPGDIRVL AVY+  LE K + DC++FPQKGERP
Sbjct: 757  QSFFQRVDEATCIVTGKVVVTKNPCLHPGDIRVLEAVYDVGLEEKNMVDCILFPQKGERP 816

Query: 125  HPNECSGGDLDGDLYFVCWDENLIPLRNDTPMDYIARRPR 6
            HPNECSGGDLDGDL+F+ WD++LIP     PMDY ARRPR
Sbjct: 817  HPNECSGGDLDGDLFFISWDKSLIPPTTVPPMDYSARRPR 856