BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00023482
         (2621 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub...    98   4e-17
emb|CBI29879.3| unnamed protein product [Vitis vinifera]               98   4e-17
ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub...    95   4e-16
ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I sub...    94   6e-16
gb|ABE87590.1| non-LTR retrolelement reverse transcriptase-like ...    77   1e-15
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...    91   7e-15
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu...    89   3e-14
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...    87   1e-13
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...    87   1e-13
dbj|BAT51049.1| largest subunit of RNA polymerase I, partial [Pr...    86   2e-13
dbj|BAT51047.1| largest subunit of RNA polymerase I, partial [Pr...    86   2e-13
dbj|BAT51046.1| largest subunit of RNA polymerase I, partial [Pr...    86   2e-13
dbj|BAT51045.1| largest subunit of RNA polymerase I, partial [Pr...    86   2e-13
ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I sub...    86   2e-13
dbj|BAT51040.1| largest subunit of RNA polymerase I, partial [Pr...    85   3e-13
dbj|BAT51037.1| largest subunit of RNA polymerase I, partial [Pr...    85   3e-13
dbj|BAT51030.1| largest subunit of RNA polymerase I, partial [Pr...    85   3e-13
dbj|BAT51055.1| largest subunit of RNA polymerase I, partial [Pr...    84   5e-13
dbj|BAT51042.1| largest subunit of RNA polymerase I, partial [Pr...    84   5e-13
dbj|BAT51039.1| largest subunit of RNA polymerase I, partial [Pr...    84   5e-13

>ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis
            vinifera]
          Length = 1691

 Score = 97.8 bits (242), Expect = 4e-17
 Identities = 51/123 (41%), Positives = 76/123 (61%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            Q  +++KLK+K+  P  +PP   I+LEDC +TL+ +FVRELED+I+NHL+++SK+SGI N
Sbjct: 1270 QTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKN 1329

Query: 2427 MGRESEAVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAEMD 2248
               +S ++  +E D+D  G                       D G+DA KRK+QA+ EMD
Sbjct: 1330 FLPDSRSMASKETDEDASG--DGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMD 1387

Query: 2247 YGE 2239
            YG+
Sbjct: 1388 YGD 1390


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 97.8 bits (242), Expect = 4e-17
 Identities = 51/123 (41%), Positives = 76/123 (61%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            Q  +++KLK+K+  P  +PP   I+LEDC +TL+ +FVRELED+I+NHL+++SK+SGI N
Sbjct: 1248 QTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKN 1307

Query: 2427 MGRESEAVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAEMD 2248
               +S ++  +E D+D  G                       D G+DA KRK+QA+ EMD
Sbjct: 1308 FLPDSRSMASKETDEDASG--DGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMD 1365

Query: 2247 YGE 2239
            YG+
Sbjct: 1366 YGD 1368


>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nelumbo
            nucifera]
          Length = 1676

 Score = 94.7 bits (234), Expect = 4e-16
 Identities = 52/126 (41%), Positives = 74/126 (58%)
 Frame = -3

Query: 2613 KQQATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGI 2434
            K Q +TV+KLK+K+  PE +PP   ITL+DC  TL  +FV E+ED+I++HL+M+SK+ GI
Sbjct: 1259 KHQVSTVYKLKLKLYPPELYPPYSGITLKDCQATLKFVFVGEMEDAIQSHLLMLSKIRGI 1318

Query: 2433 TNMGRESEAVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAE 2254
            TN+   +++   +  D+D    +S                    D G DA KRK QAT E
Sbjct: 1319 TNVVHSTQSNSGDGADEDGPTSKSQ-AAEENDDAGDDDDYEAPDDLGADAQKRKRQATDE 1377

Query: 2253 MDYGED 2236
            MDY +D
Sbjct: 1378 MDYEDD 1383


>ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Populus
            euphratica]
          Length = 1699

 Score = 94.0 bits (232), Expect = 6e-16
 Identities = 51/121 (42%), Positives = 75/121 (61%)
 Frame = -3

Query: 2595 VFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITNMGRE 2416
            ++KLK+K+  P H+P   DI++E+  +TL++LFVRELED+I+NHL+++SK+SGI N  +E
Sbjct: 1254 IYKLKMKLYTPAHYPQHADISVENWEETLEVLFVRELEDAIQNHLVLLSKISGIKNFLKE 1313

Query: 2415 SEAVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAEMDYGED 2236
            S +    E ++D  G  SH                   D G+D  KRK+Q T EMDY +D
Sbjct: 1314 SHSGTPIEAEEDVSGNISH---EGENDDDSDDEGEEADDLGLDVQKRKQQVTDEMDY-DD 1369

Query: 2235 G 2233
            G
Sbjct: 1370 G 1370


>gb|ABE87590.1| non-LTR retrolelement reverse transcriptase-like protein, related
            [Medicago truncatula]
          Length = 497

 Score = 77.4 bits (189), Expect(3) = 1e-15
 Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
 Frame = -3

Query: 1551 LPVELWIEKTLFSLGQTLGTPIVIDKRSLNHEYGYFASVLVDIDFANLDTDSVHLTVGGR 1372
            LP E W+E+TL+ +   +GTP++ID  + N  YG++A +LVD+D +      V +   G 
Sbjct: 189  LPQEYWMERTLYEIAGAVGTPLLIDNVTRNRLYGHYARILVDLDLSKKIFYEVLVEREGF 248

Query: 1371 DFWQAFEIPKRPKFCKHCKIIGHTDEECRKKTSVKLQAKGLQKN-DKNEGDGGK 1213
             F  A E    P+FC HC  IGH    CR+    + +      N  KN GD GK
Sbjct: 249  SFPIAIEYEGLPEFCTHCHSIGHNINLCRRLHPRRPETHEQPTNVKKNTGDNGK 302



 Score = 28.5 bits (62), Expect(3) = 1e-15
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = -2

Query: 1984 SFADLLKGKQQLPTTTVDLSSLPKPTVKDGKPALVIPQELFVQGCEIWRFSLIGRLNFKG 1805
            SFA  L+G    P+TT     LP P++     A+ I    + +G +  + +L GRL    
Sbjct: 48   SFAQALRGS---PSTT---DPLPLPSILGETLAVAISTTAYFRGVDYCKINLRGRLVLSK 101

Query: 1804 LDFNYVKKNL 1775
             D  Y  K++
Sbjct: 102  GDKPYATKDI 111



 Score = 27.3 bits (59), Expect(3) = 1e-15
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = -1

Query: 1730 MNRGFFIIKLLTQEDKQKVFRED----KPWLVAQQSLNLQEWYPSFDADKQVTSRATVWV 1563
            + RGF+     +QED + V+       KP L     L L EW   F+   Q  +   VW+
Sbjct: 130  LGRGFYEFFFASQEDMRTVWAAGTVSLKPGL-----LRLFEWTKDFNLHTQRQTHTQVWI 184

Query: 1562 K 1560
            +
Sbjct: 185  R 185


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 90.5 bits (223), Expect = 7e-15
 Identities = 50/126 (39%), Positives = 77/126 (61%)
 Frame = -3

Query: 2595 VFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITNMGRE 2416
            ++KLK+K+  P H+P   +I++ED  +TL+++F+RELED+I+NH+ ++S++SGI +   E
Sbjct: 1253 IYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPE 1312

Query: 2415 SEAVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAEMDYGED 2236
            S +    E D+D  G  SH                   D G+DA KRK QAT EMDY +D
Sbjct: 1313 SRSRASGEADEDVAGDMSH--REERDDDNDDDDGERADDLGLDAQKRKLQATDEMDY-DD 1369

Query: 2235 GWKWRL 2218
            G++  L
Sbjct: 1370 GFEEEL 1375


>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
            gi|550335519|gb|ERP58815.1| hypothetical protein
            POPTR_0006s05420g [Populus trichocarpa]
          Length = 1132

 Score = 88.6 bits (218), Expect = 3e-14
 Identities = 49/121 (40%), Positives = 74/121 (61%)
 Frame = -3

Query: 2595 VFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITNMGRE 2416
            ++KLK+K+  P H+P   DI++E+  +TL++LFVRELED+I+N+L+++SK+SGI N  +E
Sbjct: 686  IYKLKMKLYTPAHYPQHADISVENWEETLEVLFVRELEDAIQNYLVLLSKISGIKNFLKE 745

Query: 2415 SEAVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAEMDYGED 2236
            S +    E ++D  G  S                    D G+D  KRK+Q T EMDY +D
Sbjct: 746  SHSGTPIEAEEDVSGNISR--EGENDDDSDDEEGEEADDLGLDVQKRKQQVTDEMDY-DD 802

Query: 2235 G 2233
            G
Sbjct: 803  G 803


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score = 86.7 bits (213), Expect = 1e-13
 Identities = 49/125 (39%), Positives = 74/125 (59%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            QA +V+ L +++  P+++P   DITLED  + L+++FVRELED+I+NHL+++SK++GI N
Sbjct: 1283 QACSVYVLTMELYKPKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGIKN 1342

Query: 2427 MGRESEAVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAEMD 2248
            +          E D+D  G  S                    D G+DAHK+K++AT E D
Sbjct: 1343 VASGLTQKASNETDQDGSGNVSQ--CRGDDDDADDADGEEAEDLGMDAHKQKQRATDEKD 1400

Query: 2247 YGEDG 2233
            Y EDG
Sbjct: 1401 Y-EDG 1404


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
            gi|557523327|gb|ESR34694.1| hypothetical protein
            CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score = 86.7 bits (213), Expect = 1e-13
 Identities = 49/125 (39%), Positives = 74/125 (59%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            QA TV+ L +++  P+++P   DITLED  + L+++FVRELED+I+NHL+++SK++GI N
Sbjct: 1283 QACTVYVLTMELYKPKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGIKN 1342

Query: 2427 MGRESEAVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAEMD 2248
            +          E D++  G  S                    D G+DAHK+K++AT E D
Sbjct: 1343 VASGLTQKASNETDQEGSGNVSQ--CRGDDDDADDADGEEAEDLGMDAHKQKQRATDEKD 1400

Query: 2247 YGEDG 2233
            Y EDG
Sbjct: 1401 Y-EDG 1404


>dbj|BAT51049.1| largest subunit of RNA polymerase I, partial [Prunus pseudocerasus]
          Length = 276

 Score = 85.5 bits (210), Expect = 2e-13
 Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            Q   ++KL++ +  PEH    ++ + ED  + L+I+FVRELED+I+NH++++SK+SGI N
Sbjct: 36   QTCRIYKLEMTLHIPEHLQTIVEYSSEDWEEILEIVFVRELEDAIQNHILLLSKISGIKN 95

Query: 2427 MGRESE--AVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAE 2254
               +S+  A  E +E++ +   Q                     DFG+DAHKRK QAT E
Sbjct: 96   FMPDSQPKASNETDENRSEKKSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDE 155

Query: 2253 MDYGEDG 2233
            MDY EDG
Sbjct: 156  MDY-EDG 161


>dbj|BAT51047.1| largest subunit of RNA polymerase I, partial [Prunus subhirtella var.
            ascendens] gi|953266351|dbj|BAT51048.1| largest subunit
            of RNA polymerase I, partial [Prunus subhirtella var.
            ascendens] gi|953266357|dbj|BAT51051.1| largest subunit
            of RNA polymerase I, partial [Prunus cerasoides]
            gi|953266359|dbj|BAT51052.1| largest subunit of RNA
            polymerase I, partial [Prunus yedoensis]
            gi|953266363|dbj|BAT51054.1| largest subunit of RNA
            polymerase I, partial [Prunus subhirtella]
          Length = 276

 Score = 85.5 bits (210), Expect = 2e-13
 Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            Q   ++KL++ +  PEH    ++ + ED  + L+I+FVRELED+I+NH++++SK+SGI N
Sbjct: 36   QTCRIYKLEMTLHIPEHLQTIVEYSSEDWEEILEIVFVRELEDAIQNHILLLSKISGIKN 95

Query: 2427 MGRESE--AVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAE 2254
               +S+  A  E +E++ +   Q                     DFG+DAHKRK QAT E
Sbjct: 96   FMPDSQPKASNETDENRSEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDE 155

Query: 2253 MDYGEDG 2233
            MDY EDG
Sbjct: 156  MDY-EDG 161


>dbj|BAT51046.1| largest subunit of RNA polymerase I, partial [Prunus maximowiczii]
          Length = 276

 Score = 85.5 bits (210), Expect = 2e-13
 Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            Q   ++KL++ +  PEH    ++ + ED  + L+I+FVRELED+I+NH++++SK+SGI N
Sbjct: 36   QTCRIYKLEMTLHIPEHLQTIVEYSSEDWEEILEIVFVRELEDAIQNHILLLSKISGIKN 95

Query: 2427 MGRESE--AVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAE 2254
               +S+  A  E +E++ +   Q                     DFG+DAHKRK QAT E
Sbjct: 96   FMPDSQPKASNETDENRSEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDE 155

Query: 2253 MDYGEDG 2233
            MDY EDG
Sbjct: 156  MDY-EDG 161


>dbj|BAT51045.1| largest subunit of RNA polymerase I, partial [Prunus maximowiczii]
          Length = 276

 Score = 85.5 bits (210), Expect = 2e-13
 Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            Q   ++KL++ +  PEH    ++ + ED  + L+I+FVRELED+I+NH++++SK+SGI N
Sbjct: 36   QTCRIYKLEMTLHIPEHLQTIVEYSSEDWEEILEIVFVRELEDAIQNHILLLSKISGIKN 95

Query: 2427 MGRESE--AVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAE 2254
               +S+  A  E +E++ +   Q                     DFG+DAHKRK QAT E
Sbjct: 96   FMPDSQPKASNETDENRSEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDE 155

Query: 2253 MDYGEDG 2233
            MDY EDG
Sbjct: 156  MDY-EDG 161


>ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium
            raimondii] gi|763751831|gb|KJB19219.1| hypothetical
            protein B456_003G089300 [Gossypium raimondii]
          Length = 1674

 Score = 85.5 bits (210), Expect = 2e-13
 Identities = 47/122 (38%), Positives = 73/122 (59%)
 Frame = -3

Query: 2598 TVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITNMGR 2419
            +++KLK+++  P  +  + DIT+ DC   L+++F+RELED+I+NHL+++S++SGI N   
Sbjct: 1253 SIYKLKMRLGKPGRYLKNSDITVTDCQHILEVVFLRELEDAIQNHLVLLSRISGIKNFMP 1312

Query: 2418 ESEAVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAEMDYGE 2239
            +S      E D+D    +SH                   D G+DA K+K+QAT EMDY E
Sbjct: 1313 DSRPNASSETDEDVPESRSH----ETENDDDTDDEGRAEDLGLDAQKQKQQATDEMDY-E 1367

Query: 2238 DG 2233
            DG
Sbjct: 1368 DG 1369


>dbj|BAT51040.1| largest subunit of RNA polymerase I, partial [Prunus sargentii]
            gi|953266337|dbj|BAT51041.1| largest subunit of RNA
            polymerase I, partial [Prunus verecunda]
          Length = 284

 Score = 85.1 bits (209), Expect = 3e-13
 Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            Q   ++KL++ +  PEH    ++ + ED  + L+++FVRELED+I+NH++++SK+SGI N
Sbjct: 36   QTCRIYKLEMTLHIPEHLQTIVEYSSEDWEEILEVVFVRELEDAIQNHILLLSKISGIKN 95

Query: 2427 MGRESE--AVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAE 2254
               +S+  A  E +E++ +   Q                     DFG+DAHKRK QAT E
Sbjct: 96   FMPDSQPKASNETDENRSEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDE 155

Query: 2253 MDYGEDG 2233
            MDY EDG
Sbjct: 156  MDY-EDG 161


>dbj|BAT51037.1| largest subunit of RNA polymerase I, partial [Prunus serrulata var.
            spontanea]
          Length = 276

 Score = 85.1 bits (209), Expect = 3e-13
 Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            Q   ++KL++ +  PEH    ++ + ED  + L+++FVRELED+I+NH++++SK+SGI N
Sbjct: 36   QTCRIYKLEMTLHIPEHLQTIVEYSSEDWEEILEVVFVRELEDAIQNHILLLSKISGIKN 95

Query: 2427 MGRESE--AVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAE 2254
               +S+  A  E +E++ +   Q                     DFG+DAHKRK QAT E
Sbjct: 96   FMPDSQPKASNETDENRSEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDE 155

Query: 2253 MDYGEDG 2233
            MDY EDG
Sbjct: 156  MDY-EDG 161


>dbj|BAT51030.1| largest subunit of RNA polymerase I, partial [Prunus apetala]
            gi|953266317|dbj|BAT51031.1| largest subunit of RNA
            polymerase I, partial [Prunus apetala]
            gi|953266319|dbj|BAT51032.1| largest subunit of RNA
            polymerase I, partial [Prunus incisa]
            gi|953266321|dbj|BAT51033.1| largest subunit of RNA
            polymerase I, partial [Prunus incisa]
            gi|953266323|dbj|BAT51034.1| largest subunit of RNA
            polymerase I, partial [Prunus incisa]
            gi|953266325|dbj|BAT51035.1| largest subunit of RNA
            polymerase I, partial [Prunus nipponica]
            gi|953266327|dbj|BAT51036.1| largest subunit of RNA
            polymerase I, partial [Prunus nipponica]
            gi|953266331|dbj|BAT51038.1| largest subunit of RNA
            polymerase I, partial [Prunus serrulata var. spontanea]
            gi|953266341|dbj|BAT51043.1| largest subunit of RNA
            polymerase I, partial [Prunus speciosa]
            gi|953266343|dbj|BAT51044.1| largest subunit of RNA
            polymerase I, partial [Prunus speciosa]
            gi|953266361|dbj|BAT51053.1| largest subunit of RNA
            polymerase I, partial [Prunus yedoensis]
          Length = 284

 Score = 85.1 bits (209), Expect = 3e-13
 Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            Q   ++KL++ +  PEH    ++ + ED  + L+++FVRELED+I+NH++++SK+SGI N
Sbjct: 36   QTCRIYKLEMTLHIPEHLQTIVEYSSEDWEEILEVVFVRELEDAIQNHILLLSKISGIKN 95

Query: 2427 MGRESE--AVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAE 2254
               +S+  A  E +E++ +   Q                     DFG+DAHKRK QAT E
Sbjct: 96   FMPDSQPKASNETDENRSEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDE 155

Query: 2253 MDYGEDG 2233
            MDY EDG
Sbjct: 156  MDY-EDG 161


>dbj|BAT51055.1| largest subunit of RNA polymerase I, partial [Prunus armeniaca]
          Length = 276

 Score = 84.3 bits (207), Expect = 5e-13
 Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            Q   ++KL++ +  PEH    ++ + ED  + L+I+FVRELED+I+NH++++SK+SGI N
Sbjct: 36   QTCRIYKLEMTLHIPEHLRTIIEYSSEDWEEILEIVFVRELEDAIQNHILLLSKISGIKN 95

Query: 2427 MGRESEAVIEEEEDKDDCGKQS--HXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAE 2254
               +S+     E D++   K+S                      DFG+DAHKRK QAT E
Sbjct: 96   FTPDSQPKASNETDENLSEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDE 155

Query: 2253 MDYGEDG 2233
            MDY EDG
Sbjct: 156  MDY-EDG 161


>dbj|BAT51042.1| largest subunit of RNA polymerase I, partial [Prunus verecunda]
          Length = 284

 Score = 84.3 bits (207), Expect = 5e-13
 Identities = 48/127 (37%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            Q   ++KL++ +  PEH    ++ + ED  + L+++FVRELED+++NH++++SK+SGI N
Sbjct: 36   QTCRIYKLEMTLHIPEHLQTIVEYSSEDWEEILEVVFVRELEDALQNHILLLSKISGIKN 95

Query: 2427 MGRESE--AVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAE 2254
               +S+  A  E +E++ +   Q                     DFG+DAHKRK QAT E
Sbjct: 96   FMPDSQPKASNETDENRSEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDE 155

Query: 2253 MDYGEDG 2233
            MDY EDG
Sbjct: 156  MDY-EDG 161


>dbj|BAT51039.1| largest subunit of RNA polymerase I, partial [Prunus serrulata var.
            spontanea]
          Length = 284

 Score = 84.3 bits (207), Expect = 5e-13
 Identities = 48/127 (37%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
 Frame = -3

Query: 2607 QATTVFKLKIKVLGPEHFPPSMDITLEDCMQTLDILFVRELEDSIENHLIMVSKVSGITN 2428
            Q   ++KL++ +  PEH    ++ + ED  + L+++FVRELED+I+NH++++SK+SGI N
Sbjct: 36   QTCRIYKLEMTLHIPEHLQTIVEYSSEDWEEILEVVFVRELEDAIQNHILLLSKISGIKN 95

Query: 2427 M--GRESEAVIEEEEDKDDCGKQSHXXXXXXXXXXXXXXXXXXXDFGVDAHKRKEQATAE 2254
                 + +A  E +E++ +   Q                     DFG+DAHKRK QAT E
Sbjct: 96   FMPASQPKASNETDENRSEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKLQATDE 155

Query: 2253 MDYGEDG 2233
            MDY EDG
Sbjct: 156  MDY-EDG 161