BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00023129
         (1365 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,...   504   e-140
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,...   500   e-138
ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,...   496   e-137
ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,...   494   e-137
ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,...   493   e-136
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   493   e-136
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g...   493   e-136
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun...   492   e-136
ref|XP_008234778.1| PREDICTED: RNA polymerase sigma factor sigE,...   490   e-135
ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,...   489   e-135
ref|XP_009368680.1| PREDICTED: RNA polymerase sigma factor sigE,...   489   e-135
ref|XP_008376694.1| PREDICTED: RNA polymerase sigma factor sigE,...   488   e-135
ref|XP_009357326.1| PREDICTED: RNA polymerase sigma factor sigE,...   487   e-135
emb|CDP05091.1| unnamed protein product [Coffea canephora]            487   e-135
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   484   e-134
gb|AKC88737.1| sigma factor [Francoa sonchifolia]                     483   e-133
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   483   e-133
ref|XP_010097858.1| RNA polymerase sigma factor rpoD [Morus nota...   482   e-133
gb|KHG11410.1| RNA polymerase sigma factor rpoD [Gossypium arbor...   482   e-133
ref|XP_012440029.1| PREDICTED: RNA polymerase sigma factor sigE,...   478   e-132

>ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 514

 Score =  504 bits (1298), Expect = e-140
 Identities = 261/361 (72%), Positives = 298/361 (82%), Gaps = 4/361 (1%)
 Frame = -1

Query: 1365 KRLNLANRIASRRKXXXXXESVSSQGYKD-SVEERNVNRLIREYSVATDHVSMDWKKMKI 1189
            KRL+L  RIA RRK       +S  G K+ S E+ +V++L+ EYSV+TD  S+DWKKMKI
Sbjct: 156  KRLSLDRRIALRRKKEEGAVQLS--GVKEGSKEDGDVDKLVGEYSVSTDLASLDWKKMKI 213

Query: 1188 PPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVG 1009
            PPVLP+SEHAWLFKLMQPM AL + K+ LH+D+G+EPT  ELA + NMS  ++R+ + VG
Sbjct: 214  PPVLPSSEHAWLFKLMQPMNALFQMKENLHRDLGREPTDGELADSTNMSVFQVRRCIEVG 273

Query: 1008 RAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLST 829
            RAARN+LIKHNLRLVLF INKYFQEFANG KFQDLCQAG KGLI AIDRFEPKR+ +LST
Sbjct: 274  RAARNRLIKHNLRLVLFVINKYFQEFANGPKFQDLCQAGVKGLITAIDRFEPKRRFRLST 333

Query: 828  YGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGIS 649
            YGLFWIRHAIMRSMTLSSFTRVS+GLESVRVEIQ+ KL+LMFEL R+P EEEI +K+GIS
Sbjct: 334  YGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKLELMFELERLPTEEEIIKKVGIS 393

Query: 648  LERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPXXXXXXXXXXXXXL 478
             ERYHEV++AS+ V SLH+RH  TQEEFINGITD +   GDKR QP             L
Sbjct: 394  PERYHEVIKASKPVFSLHSRHAITQEEFINGITDIEGVGGDKRRQPALLRLALDDVLDSL 453

Query: 477  KPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            KPKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRR+I
Sbjct: 454  KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYI 513

Query: 297  F 295
            F
Sbjct: 514  F 514


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  500 bits (1287), Expect = e-138
 Identities = 260/362 (71%), Positives = 299/362 (82%), Gaps = 5/362 (1%)
 Frame = -1

Query: 1365 KRLNLANRIA-SRRKXXXXXESVSSQGYKDSV-EERNVNRLIREYSVATDHVSMDWKKMK 1192
            KRL+L  RIA S+ K      S+  +  +DS  E+ N++ L+REYS +TD VS+DWKKMK
Sbjct: 159  KRLSLEKRIALSKMKQEKAVASIQKK--RDSKNEDENIDVLVREYSASTDLVSLDWKKMK 216

Query: 1191 IPPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRV 1012
            IPPVLP SEHAWLFKLMQPMK LLE KD L KD+G+EPT  ELA A++MS+V++R+H+ V
Sbjct: 217  IPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEV 276

Query: 1011 GRAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLS 832
            G+AARNKLIKHNLRLVLF INKYFQEFANG KFQDLCQAG KGLI AIDRFEPKR  +LS
Sbjct: 277  GQAARNKLIKHNLRLVLFVINKYFQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLS 336

Query: 831  TYGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGI 652
            TYGLFWIRHAIMRSMTLSSFTRVS+GLESVRVEIQ+ KL+L+F+L R+P EEEI EK+GI
Sbjct: 337  TYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGI 396

Query: 651  SLERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPXXXXXXXXXXXXX 481
            S ERYHEVMRAS+ V+SLHARH TTQEE+INGITD +   GD+  Q              
Sbjct: 397  SPERYHEVMRASKSVLSLHARHATTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDS 456

Query: 480  LKPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRH 301
            LKPKE+LV+RQRYGLDGKGDRTLGEIAGNL+ISREMVRKHEVKALMKLKHP RVDYLR++
Sbjct: 457  LKPKESLVMRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQY 516

Query: 300  IF 295
            IF
Sbjct: 517  IF 518


>ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana sylvestris]
          Length = 519

 Score =  496 bits (1277), Expect = e-137
 Identities = 255/361 (70%), Positives = 289/361 (80%), Gaps = 4/361 (1%)
 Frame = -1

Query: 1365 KRLNLANRIAS-RRKXXXXXESVSSQGYKDSVEERNVNRLIREYSVATDHVSMDWKKMKI 1189
            KRLNL  RIA  + K      S   +  K+  E+  +++L+REYS ATD  S+DWKKMKI
Sbjct: 159  KRLNLDQRIALLKNKEGELVASSQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKI 218

Query: 1188 PPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVG 1009
            PPVLP+SEHAWLFKLMQPMKA+L+ K+ L  D+G+EPT  E A A N+ + ELRK+L VG
Sbjct: 219  PPVLPSSEHAWLFKLMQPMKAILQVKENLQNDLGREPTDAEAAEATNIDASELRKNLEVG 278

Query: 1008 RAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLST 829
            RAARNKLIKHNLRLVLF INKYFQ+FANG KFQDLCQAG KGLI AIDRFEP RK +LST
Sbjct: 279  RAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLST 338

Query: 828  YGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGIS 649
            YGLFWIRHAI+RSMT SSFT+V +GLES+RVEIQK KLQL+FEL R+P +EEI E++ +S
Sbjct: 339  YGLFWIRHAIIRSMTTSSFTKVPFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLS 398

Query: 648  LERYHEVMRASQGVISLHARHNTTQEEFINGITD---FDGDKRSQPXXXXXXXXXXXXXL 478
             ERYHEVM+ S+ V SLHARH TTQEE INGITD    DGDKR QP             L
Sbjct: 399  PERYHEVMKVSKPVFSLHARHMTTQEELINGITDVDGVDGDKRRQPALLRLALDDVLDSL 458

Query: 477  KPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            KPKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRR+I
Sbjct: 459  KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYI 518

Query: 297  F 295
            F
Sbjct: 519  F 519


>ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 519

 Score =  494 bits (1272), Expect = e-137
 Identities = 254/361 (70%), Positives = 290/361 (80%), Gaps = 4/361 (1%)
 Frame = -1

Query: 1365 KRLNLANRIAS-RRKXXXXXESVSSQGYKDSVEERNVNRLIREYSVATDHVSMDWKKMKI 1189
            KRLNL  RIA  + K      S   +  K+  E+  +++L+REYS ATD  S+DWKKMKI
Sbjct: 159  KRLNLDQRIALLKNKEGELVASSQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKI 218

Query: 1188 PPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVG 1009
            PPVLP+SEHAWLFKLMQPMKA+L+ K+ L  D+G+EPT  E+A A N+ + ELRK+L VG
Sbjct: 219  PPVLPSSEHAWLFKLMQPMKAILQVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVG 278

Query: 1008 RAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLST 829
            RAARNKLIKHNLRLVLF INKYFQ+FANG KFQDLCQAG KGLI AIDRFEP RK +LST
Sbjct: 279  RAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLST 338

Query: 828  YGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGIS 649
            YGLFWIRHAI+RSMT SSFT+V +GLES+RVEIQK KLQL+FEL R+P +EEI E++ +S
Sbjct: 339  YGLFWIRHAIIRSMTTSSFTKVPFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLS 398

Query: 648  LERYHEVMRASQGVISLHARHNTTQEEFINGITD---FDGDKRSQPXXXXXXXXXXXXXL 478
             ERYHEVM+ S+ V SLHARH TTQEEFINGITD    DG KR QP             L
Sbjct: 399  PERYHEVMKVSKPVFSLHARHMTTQEEFINGITDVDGVDGVKRKQPALLRLALDDVLDSL 458

Query: 477  KPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            KPKE+LVIRQRYGLDGKG+RTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRR+I
Sbjct: 459  KPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYI 518

Query: 297  F 295
            F
Sbjct: 519  F 519


>ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Erythranthe guttatus]
            gi|604299780|gb|EYU19623.1| hypothetical protein
            MIMGU_mgv1a020453mg [Erythranthe guttata]
          Length = 515

 Score =  493 bits (1269), Expect = e-136
 Identities = 247/363 (68%), Positives = 297/363 (81%), Gaps = 6/363 (1%)
 Frame = -1

Query: 1365 KRLNLANRIASRRKXXXXXESVSSQ---GYKDSVEERNVNRLIREYSVATDHVSMDWKKM 1195
            +RLNL  RIA R K      ++  +   G  D  E+  ++RL+R+YS ++D VS+DWKKM
Sbjct: 154  RRLNLEKRIALRTKKEDESTAIFQRRKTGKND--EDEKIDRLVRDYSASSDLVSLDWKKM 211

Query: 1194 KIPPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLR 1015
            KIPPVLP++EH WLFKLMQP+KA+L+ K+ +  ++G+EPT  +LA A+NM +V+LRK L 
Sbjct: 212  KIPPVLPSAEHVWLFKLMQPVKAILDVKETIENNLGREPTDEKLATAINMDTVQLRKQLE 271

Query: 1014 VGRAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQL 835
            +GRAARNKLIKHNLRLVLF +NKYFQ+F+NG++FQDLCQAGAKGLI AIDRFEPKRK +L
Sbjct: 272  IGRAARNKLIKHNLRLVLFVMNKYFQDFSNGSRFQDLCQAGAKGLITAIDRFEPKRKLRL 331

Query: 834  STYGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMG 655
            STYGLFWIRH+I+RSMTLSSFT+VS+GLESVRVEI+K KL+LMFEL R+P +EEI  ++G
Sbjct: 332  STYGLFWIRHSIIRSMTLSSFTKVSFGLESVRVEIRKAKLELMFELKRLPTDEEIVGRVG 391

Query: 654  ISLERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPXXXXXXXXXXXX 484
            IS ERYHEVMR S+ +ISLHARH+ TQEEFINGITD D   GD+R QP            
Sbjct: 392  ISQERYHEVMRVSKPIISLHARHSVTQEEFINGITDVDGVEGDRRKQPALLRLALDDVLD 451

Query: 483  XLKPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRR 304
             LKPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK+EVKALMKLKH  RVDYLRR
Sbjct: 452  SLKPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYEVKALMKLKHRARVDYLRR 511

Query: 303  HIF 295
            ++F
Sbjct: 512  YVF 514


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  493 bits (1268), Expect = e-136
 Identities = 251/361 (69%), Positives = 289/361 (80%), Gaps = 4/361 (1%)
 Frame = -1

Query: 1365 KRLNLANRIAS-RRKXXXXXESVSSQGYKDSVEERNVNRLIREYSVATDHVSMDWKKMKI 1189
            KRLNL  RIA  + K      S   +  K+  E+  +++L+REYS ATD  S+DWKKMKI
Sbjct: 156  KRLNLDQRIALLKNKEGEMVASSERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKI 215

Query: 1188 PPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVG 1009
            PPVLP+SEH WLFKLMQPMKA+L+ K+ L  D+G+EPT  E+A A NM + ELRK L VG
Sbjct: 216  PPVLPSSEHVWLFKLMQPMKAILQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEVG 275

Query: 1008 RAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLST 829
            RAARNKLIKHNLRLVLF +NKYFQ+FANG++FQDLCQAG KGLI AIDRFEP RK +LST
Sbjct: 276  RAARNKLIKHNLRLVLFVMNKYFQDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLST 335

Query: 828  YGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGIS 649
            YGLFWIRHAI+RSMT SSFT+V +GLES+RVEIQK KL+L+FEL RIP +EEI  ++G+S
Sbjct: 336  YGLFWIRHAIIRSMTTSSFTKVPFGLESIRVEIQKAKLELLFELQRIPTDEEIIRRVGLS 395

Query: 648  LERYHEVMRASQGVISLHARHNTTQEEFINGITD---FDGDKRSQPXXXXXXXXXXXXXL 478
             ERYHEVM+ S+ V SLHAR+ TTQEE INGITD    DGDKR QP             L
Sbjct: 396  PERYHEVMKVSKPVSSLHARNKTTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSL 455

Query: 477  KPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            KPKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDY+RR+I
Sbjct: 456  KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYI 515

Query: 297  F 295
            F
Sbjct: 516  F 516


>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1
            [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
            factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  493 bits (1268), Expect = e-136
 Identities = 249/359 (69%), Positives = 292/359 (81%), Gaps = 3/359 (0%)
 Frame = -1

Query: 1365 KRLNLANRIASRRKXXXXXESVSSQGYKDSVEERNVNRLIREYSVATDHVSMDWKKMKIP 1186
            KRL+L NRIA ++           +      E   ++RL+R+YS +TD VS+DW+KMKIP
Sbjct: 157  KRLSLDNRIALKKNREEKPVVSVRRKKSSENESEKIDRLVRDYSASTDLVSLDWRKMKIP 216

Query: 1185 PVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVGR 1006
            PVLP+ EH WLFKLMQPMKALL++K+ L KD+G++PT +ELA A NMS+ ++RKHL VG+
Sbjct: 217  PVLPSIEHTWLFKLMQPMKALLQAKENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQ 276

Query: 1005 AARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLSTY 826
            AARNKLIKHNLRLVLF+INKYFQ+FANG +FQDLCQAG KGLI AIDRFEP+R+ +LSTY
Sbjct: 277  AARNKLIKHNLRLVLFSINKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTY 336

Query: 825  GLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGISL 646
             LFWIRHAI+RSMTLSSFTRVS+GLESVRVEIQ+ KL+L+FEL+R P EEEI +K+GIS 
Sbjct: 337  SLFWIRHAIIRSMTLSSFTRVSFGLESVRVEIQRAKLELLFELHREPTEEEIIKKVGISP 396

Query: 645  ERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPXXXXXXXXXXXXXLK 475
            ERY EVMRAS+ V SLH+RH+ TQEEFINGITD D   GD R QP             LK
Sbjct: 397  ERYQEVMRASKPVASLHSRHSVTQEEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLK 456

Query: 474  PKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            PKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRR++
Sbjct: 457  PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
            gi|462415472|gb|EMJ20209.1| hypothetical protein
            PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  492 bits (1266), Expect = e-136
 Identities = 253/360 (70%), Positives = 287/360 (79%), Gaps = 4/360 (1%)
 Frame = -1

Query: 1365 KRLNLANRIASR-RKXXXXXESVSSQGYKDSVEERNVNRLIREYSVATDHVSMDWKKMKI 1189
            KRL+L  R+A +  K      S+  +      E   +  L+REYS +TD VS+DWKKMKI
Sbjct: 159  KRLSLNKRVALKWNKDEKVISSIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKI 218

Query: 1188 PPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVG 1009
            PPVL +SEHAWLFKLMQPMK LLE K+ L KD+G+EPT+ ELA A NMS V+++KHL VG
Sbjct: 219  PPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVG 278

Query: 1008 RAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLST 829
            RAAR+KLIKHNLRLVLF +NKYFQ+FANG KFQDLCQAG KGLI AIDRFEPKR  +LST
Sbjct: 279  RAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLST 338

Query: 828  YGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGIS 649
            YGLFWIRHAI+RSMTLSSFTRVS+GLESVR EIQK KL ++F L R+P E+EI EK+GIS
Sbjct: 339  YGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGIS 398

Query: 648  LERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPXXXXXXXXXXXXXL 478
             ERYHEVMRAS+ V SLH+RH TTQEEFINGITD D   GD R +P             L
Sbjct: 399  PERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSL 458

Query: 477  KPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            KPKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRR++
Sbjct: 459  KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 518


>ref|XP_008234778.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Prunus mume]
          Length = 507

 Score =  490 bits (1262), Expect = e-135
 Identities = 252/360 (70%), Positives = 286/360 (79%), Gaps = 4/360 (1%)
 Frame = -1

Query: 1365 KRLNLANRIASR-RKXXXXXESVSSQGYKDSVEERNVNRLIREYSVATDHVSMDWKKMKI 1189
            KRL+L  R+  +  K      S+  +      E   +  L+REYS +TD VS+DWKKMKI
Sbjct: 147  KRLSLDKRVTLKWNKDEKVIASIVRKRKSRKNENEKIEELVREYSASTDLVSLDWKKMKI 206

Query: 1188 PPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVG 1009
            PPVL +SEHAWLFKLMQPMK LLE K+ L KD+G+EPT+ ELA A NMS V+++KHL VG
Sbjct: 207  PPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVG 266

Query: 1008 RAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLST 829
            RAAR+KLIKHNLRLVLF +NKYFQ+FANG KFQDLCQAG KGLI AIDRFEPKR  +LST
Sbjct: 267  RAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLST 326

Query: 828  YGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGIS 649
            YGLFWIRHAI+RSMTLSSFTRVS+GLESVR EIQK KL ++F L R+P E+EI EK+GIS
Sbjct: 327  YGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGIS 386

Query: 648  LERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPXXXXXXXXXXXXXL 478
             ERYHEVMRAS+ V SLH+RH TTQEEFINGITD D   GD R +P             L
Sbjct: 387  PERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSL 446

Query: 477  KPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            KPKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRR++
Sbjct: 447  KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 506


>ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Sesamum indicum]
          Length = 518

 Score =  489 bits (1258), Expect = e-135
 Identities = 249/362 (68%), Positives = 291/362 (80%), Gaps = 5/362 (1%)
 Frame = -1

Query: 1365 KRLNLANRIASRRKXXXXXESVSSQGYKD--SVEERNVNRLIREYSVATDHVSMDWKKMK 1192
            +RL L  RIA +        + SSQ  K   + E+  ++RL+R+YS +TD VS+DWKKMK
Sbjct: 156  RRLTLEKRIALKTNKEVDFLASSSQKRKQRKNDEDEKIDRLVRDYSASTDLVSLDWKKMK 215

Query: 1191 IPPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRV 1012
            IPPVLP+SEHAWLFKLMQPMKA+L+ K+ L  D+G+E T +ELA A   ++V+LRK L V
Sbjct: 216  IPPVLPSSEHAWLFKLMQPMKAILQVKENLQNDLGREVTDDELAEATKTNAVQLRKQLEV 275

Query: 1011 GRAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLS 832
            GRAARNKLIKHNLRLVLF +NKYFQ+F+NG +FQDLCQAG KGLI AIDRFEPKRK +LS
Sbjct: 276  GRAARNKLIKHNLRLVLFVMNKYFQDFSNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLS 335

Query: 831  TYGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGI 652
            TY LFWIRHAI+RSMTLSSFT+VS+GLESVRVEIQK KL+L+FEL R+P +EEI  ++GI
Sbjct: 336  TYSLFWIRHAIIRSMTLSSFTKVSFGLESVRVEIQKAKLELLFELQRLPSDEEIVNRVGI 395

Query: 651  SLERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPXXXXXXXXXXXXX 481
            S ERYHEVMR S+ + SLHARH  TQEEFINGI+D D   GDKR QP             
Sbjct: 396  SPERYHEVMRVSKPISSLHARHAVTQEEFINGISDVDDVEGDKRRQPALLRLALDDVLDS 455

Query: 480  LKPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRH 301
            LKPKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP R+DYLRR+
Sbjct: 456  LKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARIDYLRRY 515

Query: 300  IF 295
            I+
Sbjct: 516  IY 517


>ref|XP_009368680.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Pyrus x bretschneideri]
          Length = 519

 Score =  489 bits (1258), Expect = e-135
 Identities = 251/359 (69%), Positives = 283/359 (78%), Gaps = 3/359 (0%)
 Frame = -1

Query: 1365 KRLNLANRIASRRKXXXXXESVSSQGYKDSVEERNVNRLIREYSVATDHVSMDWKKMKIP 1186
            KRLNL  R+A +        S   +      E   +  L+REYS +TD VS+DWKKMKIP
Sbjct: 160  KRLNLDKRVALKWNKDEKVVSSVQKRKDQKNETEKIEELVREYSASTDLVSLDWKKMKIP 219

Query: 1185 PVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVGR 1006
            PVL +SEHAWLFKLMQPMK L E ++ L KD+G EPT+ ELA A NMS V+++KH  VGR
Sbjct: 220  PVLTSSEHAWLFKLMQPMKGLHEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVGR 279

Query: 1005 AARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLSTY 826
            AARNKLIKHNLRLVLF INKYFQ+FANG KFQDLCQAG +GLI AIDRFEPKR  +LSTY
Sbjct: 280  AARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLSTY 339

Query: 825  GLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGISL 646
            GLFWIRHAI+RSMT+SSFTRVS+GLESVR EIQK KL++MF L R+P +EEI EK+GIS 
Sbjct: 340  GLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAKLEMMFSLKRMPTDEEIIEKVGISP 399

Query: 645  ERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPXXXXXXXXXXXXXLK 475
            ERYHEVMRAS+ V SLH+RH TTQEE+INGITD D   GD R +P             LK
Sbjct: 400  ERYHEVMRASKPVSSLHSRHATTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSLK 459

Query: 474  PKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            PKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRR+I
Sbjct: 460  PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 518


>ref|XP_008376694.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Malus domestica]
          Length = 519

 Score =  488 bits (1257), Expect = e-135
 Identities = 254/360 (70%), Positives = 287/360 (79%), Gaps = 4/360 (1%)
 Frame = -1

Query: 1365 KRLNLANRIASRRKXXXXXESVSSQGYKDSVEE-RNVNRLIREYSVATDHVSMDWKKMKI 1189
            KRLNL  R++ +        S S Q  KD   E   +  L+REYS +TD VS+DWKKMKI
Sbjct: 160  KRLNLDKRVSLKWNKDEKVVS-SVQKRKDQKNEMEKIEELVREYSASTDLVSLDWKKMKI 218

Query: 1188 PPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVG 1009
            PPVL +SEHAWLFKLMQPMK L E+++ L KD+G EPT+ ELA A NMS V+++KH  VG
Sbjct: 219  PPVLTSSEHAWLFKLMQPMKGLHEAREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVG 278

Query: 1008 RAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLST 829
            RAARNKLIKHNLRLVLF INKYFQ+FANG KFQDLCQAG +GLI AIDRFEPKR  +LST
Sbjct: 279  RAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLST 338

Query: 828  YGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGIS 649
            YGLFWIRHAI+RSMT+SSFTRVS+GLESVR EIQK KL+++F L RIP +EEI EK+GIS
Sbjct: 339  YGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAKLEMIFSLKRIPTDEEIIEKVGIS 398

Query: 648  LERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPXXXXXXXXXXXXXL 478
             ERYHEVMRAS+ V SLH+RH TTQEE+INGITD D   GD R +P             L
Sbjct: 399  PERYHEVMRASKPVSSLHSRHATTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSL 458

Query: 477  KPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            KPKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRR+I
Sbjct: 459  KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 518


>ref|XP_009357326.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Pyrus x bretschneideri]
          Length = 519

 Score =  487 bits (1254), Expect = e-135
 Identities = 250/359 (69%), Positives = 283/359 (78%), Gaps = 3/359 (0%)
 Frame = -1

Query: 1365 KRLNLANRIASRRKXXXXXESVSSQGYKDSVEERNVNRLIREYSVATDHVSMDWKKMKIP 1186
            KRLNL  R+A +        S   +      E   +  L+REYS +TD VS+DWKKMKIP
Sbjct: 160  KRLNLDKRVALKWNKDEKVVSSVQKRKDQKNETEKIEELVREYSASTDLVSLDWKKMKIP 219

Query: 1185 PVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVGR 1006
            PVL +SEHAWLFKLMQPMK L E ++ L KD+G EPT+ ELA A NMS V+++KH  VGR
Sbjct: 220  PVLTSSEHAWLFKLMQPMKGLHEVREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVGR 279

Query: 1005 AARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLSTY 826
            AARNKLIKHNLRLVLF INKYFQ+FANG KFQDLCQAG +GLI AIDRFEPKR  +LSTY
Sbjct: 280  AARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLSTY 339

Query: 825  GLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGISL 646
            GLFWIRHAI+RSMT+SSFTRVS+GLESVR EIQK KL+++F L R+P +EEI EK+GIS 
Sbjct: 340  GLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAKLEMIFSLKRMPTDEEIIEKVGISP 399

Query: 645  ERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPXXXXXXXXXXXXXLK 475
            ERYHEVMRAS+ V SLH+RH TTQEE+INGITD D   GD R +P             LK
Sbjct: 400  ERYHEVMRASKPVSSLHSRHATTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSLK 459

Query: 474  PKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            PKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRR+I
Sbjct: 460  PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 518


>emb|CDP05091.1| unnamed protein product [Coffea canephora]
          Length = 530

 Score =  487 bits (1254), Expect = e-135
 Identities = 248/374 (66%), Positives = 294/374 (78%), Gaps = 17/374 (4%)
 Frame = -1

Query: 1365 KRLNLANRIASRRKXXXXXESVS-----SQGYKDSV---------EERNVNRLIREYSVA 1228
            KRL+L  R+  R+K      S S     S+G +D           E+  +NRL+REYS +
Sbjct: 157  KRLSLDKRVTLRKKRDSEAISSSQKRKSSEGDEDEEINRKSSEDDEDEKINRLLREYSGS 216

Query: 1227 TDHVSMDWKKMKIPPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVN 1048
            TD  S+DWKKMKIPPVLP+SEH+WLFKLMQPMKA+++ K+ L  D+G+EPT  ELA A N
Sbjct: 217  TDFTSLDWKKMKIPPVLPSSEHSWLFKLMQPMKAIIQVKENLPNDLGREPTDGELAEATN 276

Query: 1047 MSSVELRKHLRVGRAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAI 868
            +  + LRK ++VG+AARNKLIKHNLRLVLF +NKYFQ+F NG KFQDLCQAG KGLI AI
Sbjct: 277  LDVLHLRKDIKVGQAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQAGVKGLITAI 336

Query: 867  DRFEPKRKSQLSTYGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRI 688
            DRFEPKRK +LSTYGLFWIRHAI+RSMTLSS T+VS+GL+SVR+EIQ+ KL+L+FEL R+
Sbjct: 337  DRFEPKRKFRLSTYGLFWIRHAIIRSMTLSSLTKVSFGLDSVRIEIQRAKLELLFELQRM 396

Query: 687  PKEEEIAEKMGISLERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPX 517
            P E+EI E++GIS ERYHEVMR S  ++SLHARH+ TQEEFINGITD D   G+KR QP 
Sbjct: 397  PTEDEIIERVGISPERYHEVMRVSNPILSLHARHSATQEEFINGITDVDGVEGEKRRQPA 456

Query: 516  XXXXXXXXXXXXLKPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKL 337
                        LKPKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKL
Sbjct: 457  LLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKL 516

Query: 336  KHPTRVDYLRRHIF 295
            KHP RVDYLRR+++
Sbjct: 517  KHPARVDYLRRYVY 530


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Fragaria vesca subsp. vesca]
          Length = 520

 Score =  484 bits (1245), Expect = e-134
 Identities = 248/360 (68%), Positives = 287/360 (79%), Gaps = 4/360 (1%)
 Frame = -1

Query: 1365 KRLNLANRIASR-RKXXXXXESVSSQGYKDSVEERNVNRLIREYSVATDHVSMDWKKMKI 1189
            KRL+L  R+A +  K      SV  +      E   +  L+REYS +TD VS+DWKKM+I
Sbjct: 160  KRLSLDKRVALKWNKDEKVAASVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRI 219

Query: 1188 PPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVG 1009
            PPVL +SEH WLFKLMQPMK LLE K++L KD+G+EP   ELA A NM+ V++++HL VG
Sbjct: 220  PPVLSSSEHTWLFKLMQPMKGLLEVKEILQKDLGREPNKGELAEATNMTVVQVKRHLEVG 279

Query: 1008 RAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLST 829
            RAARNKLIKHNLRLVLF INKYFQ+FANG KFQDLCQAG KGLI AIDRFEP+R+ +LST
Sbjct: 280  RAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLST 339

Query: 828  YGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGIS 649
            YGLFWIRHAI+RSMTLSSFTRVS+GLESVR EIQK KL+++ +L R+P E+EI EK+GIS
Sbjct: 340  YGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGIS 399

Query: 648  LERYHEVMRASQGVISLHARHNTTQEEFINGITD---FDGDKRSQPXXXXXXXXXXXXXL 478
             ERYHEVMRAS+ V SL++RH+ TQEEFINGITD    DGD R +P             L
Sbjct: 400  PERYHEVMRASKPVFSLNSRHSVTQEEFINGITDVDGVDGDNRRKPALLRLAIDDVLDSL 459

Query: 477  KPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            KPKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRR+I
Sbjct: 460  KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 519


>gb|AKC88737.1| sigma factor [Francoa sonchifolia]
          Length = 513

 Score =  483 bits (1244), Expect = e-133
 Identities = 248/359 (69%), Positives = 287/359 (79%), Gaps = 3/359 (0%)
 Frame = -1

Query: 1365 KRLNLANRIASRRKXXXXXESVSSQGYKDSVEERNVNRLIREYSVATDHVSMDWKKMKIP 1186
            KRL+L  RI+  R      +S S        E  +V+ L+REYS +TD VS+DWKKMKIP
Sbjct: 154  KRLSLDRRISLIRNKEGDADSSSRSKIDQKNENYSVDWLVREYSASTDLVSLDWKKMKIP 213

Query: 1185 PVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVGR 1006
            PVL + EHAWLFKLMQPMK LL+ K+ LHKD  +EPT  ELA A+NM+ +E+RK + VGR
Sbjct: 214  PVLSSLEHAWLFKLMQPMKELLQLKENLHKDFSREPTDYELAEALNMNVIEMRKDMDVGR 273

Query: 1005 AARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLSTY 826
            AARNKLIKHNLRLVLF +NKYFQ+FANG +FQDLCQAG KGLI AIDRFEPKR+ +LSTY
Sbjct: 274  AARNKLIKHNLRLVLFVMNKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPKRRVRLSTY 333

Query: 825  GLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGISL 646
            GLFWIRHAI RS+TLSSFTRVS+GLESVRVEIQ+ KL+L+FEL+R+P E+EI EK+GIS 
Sbjct: 334  GLFWIRHAITRSLTLSSFTRVSFGLESVRVEIQRAKLELLFELHRLPTEDEIIEKVGISF 393

Query: 645  ERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPXXXXXXXXXXXXXLK 475
            ERYHEVMRA++ V SLHA+H  T EEFIN +TD D   GD+R QP             LK
Sbjct: 394  ERYHEVMRAAKPVYSLHAKHMITHEEFINALTDVDGIHGDQRRQPALFRLALDDVLDSLK 453

Query: 474  PKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            PKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRR++
Sbjct: 454  PKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 512


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial isoform X1 [Solanum
            lycopersicum]
          Length = 516

 Score =  483 bits (1244), Expect = e-133
 Identities = 245/361 (67%), Positives = 285/361 (78%), Gaps = 4/361 (1%)
 Frame = -1

Query: 1365 KRLNLANRIAS-RRKXXXXXESVSSQGYKDSVEERNVNRLIREYSVATDHVSMDWKKMKI 1189
            KRLNL  RIA  + K      S   +   +  E+  +++L+REYS ATD  S+DWKKMKI
Sbjct: 156  KRLNLDQRIALLKNKEGKMLASSERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKI 215

Query: 1188 PPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVG 1009
            PPVLP+SEH WLFKLMQPMKA+L+ K+ L  D+G+EPT  E+A A NM + ELRK L  G
Sbjct: 216  PPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEAG 275

Query: 1008 RAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLST 829
            RAARNKLIKHNLRLVLF +NKYFQ+FAN ++FQDLCQAG KGLI AIDRFEP RK +LST
Sbjct: 276  RAARNKLIKHNLRLVLFVMNKYFQDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLST 335

Query: 828  YGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGIS 649
            YGLFWIRHAI+R MT SSFT+V +GLES+RVEIQK KL+L+FEL RIP ++EI +++G S
Sbjct: 336  YGLFWIRHAIIRYMTTSSFTKVPFGLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFS 395

Query: 648  LERYHEVMRASQGVISLHARHNTTQEEFINGITD---FDGDKRSQPXXXXXXXXXXXXXL 478
             ERYHEVM+ S+ + SLHAR+ TTQEE INGITD    DGDKR QP             L
Sbjct: 396  PERYHEVMKVSKPIFSLHARNKTTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSL 455

Query: 477  KPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            KPKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDY+RR+I
Sbjct: 456  KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYI 515

Query: 297  F 295
            F
Sbjct: 516  F 516


>ref|XP_010097858.1| RNA polymerase sigma factor rpoD [Morus notabilis]
            gi|587883538|gb|EXB72455.1| RNA polymerase sigma factor
            rpoD [Morus notabilis]
          Length = 517

 Score =  482 bits (1240), Expect = e-133
 Identities = 246/360 (68%), Positives = 288/360 (80%), Gaps = 4/360 (1%)
 Frame = -1

Query: 1365 KRLNLANRIASRRKXXXXXESVSSQGYKDSV-EERNVNRLIREYSVATDHVSMDWKKMKI 1189
            KRL+L  R+  +R        V  +  ++S+ EE  + +L+REYS +TD VS+DWKKMKI
Sbjct: 157  KRLSLHKRVELKRDKEENVAVVLVRKRRESLNEEEKIEKLVREYSASTDLVSLDWKKMKI 216

Query: 1188 PPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVG 1009
            PPVLP+SEH WLFKLMQP+K L +  + L K +G+EPT NELA A N+S V++++HL  G
Sbjct: 217  PPVLPSSEHTWLFKLMQPLKQLFQVGEDLQKTLGREPTENELAEATNISVVQVKRHLEAG 276

Query: 1008 RAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLST 829
            RAARNKLIKHNLRLVLF +NKYFQ+F NG KFQDLCQAG +GLI AIDRFEPKR+ +LST
Sbjct: 277  RAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQAGVRGLITAIDRFEPKRRFRLST 336

Query: 828  YGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGIS 649
            YGLFWIRHAI+RSMT+SSFTRVS+GLESVR EIQK K++L FEL R+P EEEI EK+GIS
Sbjct: 337  YGLFWIRHAIIRSMTVSSFTRVSFGLESVRAEIQKAKIELTFELKRLPTEEEIIEKVGIS 396

Query: 648  LERYHEVMRASQGVISLHARHNTTQEEFINGITD---FDGDKRSQPXXXXXXXXXXXXXL 478
             ERYHEVMRAS+ VISL++RH TTQEEFIN ITD    DGD R +P             L
Sbjct: 397  PERYHEVMRASKPVISLNSRHVTTQEEFINAITDVDGVDGDDRRKPALLRLALDDVLDSL 456

Query: 477  KPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            KPKE+LVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRR++
Sbjct: 457  KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYM 516


>gb|KHG11410.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 516

 Score =  482 bits (1240), Expect = e-133
 Identities = 247/360 (68%), Positives = 291/360 (80%), Gaps = 4/360 (1%)
 Frame = -1

Query: 1365 KRLNLANRIASRRKXXXXXESVSSQGYKD-SVEERNVNRLIREYSVATDHVSMDWKKMKI 1189
            +RL L  RI   +K       VS Q  K  S E   ++RL+R+YS +TD VS+DWKKMKI
Sbjct: 157  RRLGLDKRI-ELKKNREEKSVVSGQSKKGISNESEKIDRLVRDYSASTDLVSLDWKKMKI 215

Query: 1188 PPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVG 1009
            PPVLP++EH WLFKLMQPMKALLE+K+ L KD+G++PT +ELA A N S+ ++R+ L VG
Sbjct: 216  PPVLPSTEHTWLFKLMQPMKALLEAKENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVG 275

Query: 1008 RAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLST 829
            RAARNKLIKHNLRLVLF INKYFQ+FANG +FQDLCQAG KGLI AIDRFEP+R+ +LST
Sbjct: 276  RAARNKLIKHNLRLVLFVINKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLST 335

Query: 828  YGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGIS 649
            YGLFWIRHAI+RSMTLSSFTRVS+GLESVRVEIQ+ KL+L+FEL+R P ++E+ +++GIS
Sbjct: 336  YGLFWIRHAIIRSMTLSSFTRVSFGLESVRVEIQRAKLELLFELHREPTDDEVIKRVGIS 395

Query: 648  LERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPXXXXXXXXXXXXXL 478
             ERY EVMRAS+ V SLH RH+ TQEEFI+GITD D   GD R QP             L
Sbjct: 396  PERYQEVMRASKPVASLHLRHSVTQEEFISGITDVDGVGGDHRRQPALLRLALDDVLDSL 455

Query: 477  KPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            KPKE+LVIRQRYGLDGKGDRTLGEI+GNLNISREMVRKHEVKALMKLKHP RVDYLRR++
Sbjct: 456  KPKESLVIRQRYGLDGKGDRTLGEISGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>ref|XP_012440029.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Gossypium raimondii]
            gi|823214552|ref|XP_012440030.1| PREDICTED: RNA
            polymerase sigma factor sigE, chloroplastic/mitochondrial
            [Gossypium raimondii] gi|763785552|gb|KJB52623.1|
            hypothetical protein B456_008G270500 [Gossypium
            raimondii] gi|763785553|gb|KJB52624.1| hypothetical
            protein B456_008G270500 [Gossypium raimondii]
          Length = 516

 Score =  478 bits (1229), Expect = e-132
 Identities = 245/360 (68%), Positives = 290/360 (80%), Gaps = 4/360 (1%)
 Frame = -1

Query: 1365 KRLNLANRIASRRKXXXXXESVSSQGYKD-SVEERNVNRLIREYSVATDHVSMDWKKMKI 1189
            +RL L  RI   +K       VS Q  K  S E   ++RL+R+YS +TD VS+DWKKMK+
Sbjct: 157  RRLGLDKRI-ELKKNREEKSVVSGQSKKGISNESEKIDRLVRDYSASTDLVSLDWKKMKM 215

Query: 1188 PPVLPASEHAWLFKLMQPMKALLESKDVLHKDIGKEPTSNELAAAVNMSSVELRKHLRVG 1009
            PPVLP++EH WLFKLMQPMKALLE+K+ L KD+G++PT +ELA A N S+ ++R+ L VG
Sbjct: 216  PPVLPSTEHTWLFKLMQPMKALLEAKENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVG 275

Query: 1008 RAARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRFEPKRKSQLST 829
            RAARNKLIKHNLRLVLF I KYFQ+FANG +FQDLCQAG KGLI AIDRFEP+R+ +LST
Sbjct: 276  RAARNKLIKHNLRLVLFVIKKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLST 335

Query: 828  YGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKEEEIAEKMGIS 649
            YGLFWIRHAI+RSMTLSSFTRVS+GLESVRVEIQ+ KL+L+FEL+R P ++E+ +++GIS
Sbjct: 336  YGLFWIRHAIIRSMTLSSFTRVSFGLESVRVEIQRAKLELLFELHREPTDDEVIKRVGIS 395

Query: 648  LERYHEVMRASQGVISLHARHNTTQEEFINGITDFD---GDKRSQPXXXXXXXXXXXXXL 478
             ERY EVMRAS+ V SLH RH+ TQEEFI+GITD D   GD R QP             L
Sbjct: 396  PERYQEVMRASKPVASLHLRHSVTQEEFISGITDVDGVGGDHRRQPALLRLALDDVLDSL 455

Query: 477  KPKENLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRHI 298
            KPKE+LVIRQRYGLDGKGDRTLGEIAGNL+ISREMVRKHEVKALMKLKHP RVDYLRR++
Sbjct: 456  KPKESLVIRQRYGLDGKGDRTLGEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRRYV 515