BLASTX nr result

ID: Papaver29_contig00018801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00018801
         (473 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDX98845.1| BnaC09g49900D [Brassica napus]                         52   4e-16
gb|KRH33480.1| hypothetical protein GLYMA_10G125300 [Glycine max]      45   4e-10
ref|XP_008363770.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    52   5e-08
ref|XP_006290198.1| hypothetical protein CARUB_v10003883mg [Caps...    54   9e-08
ref|XP_010257043.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    53   9e-08
ref|XP_010491077.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    52   3e-07
gb|KFK24964.1| hypothetical protein AALP_AA8G048500 [Arabis alpina]    52   3e-07
ref|NP_196164.1| DEAD-box ATP-dependent RNA helicase 18 [Arabido...    53   3e-07
ref|XP_010452447.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    52   3e-07
ref|XP_002871160.1| hypothetical protein ARALYDRAFT_908458 [Arab...    53   3e-07
ref|XP_010423471.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    52   3e-07
ref|XP_009345377.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    50   3e-07
ref|XP_008374333.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    49   4e-07
ref|XP_006399006.1| hypothetical protein EUTSA_v10013039mg [Eutr...    51   6e-07
ref|XP_008233812.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    48   6e-07
ref|XP_010558064.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    51   6e-07
ref|XP_007220555.1| hypothetical protein PRUPE_ppa003226mg [Prun...    48   6e-07
dbj|BAF00189.1| ATP-dependent RNA helicase-like protein [Arabido...    53   2e-06
ref|XP_009764877.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    47   2e-06
ref|XP_009764878.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    47   2e-06

>emb|CDX98845.1| BnaC09g49900D [Brassica napus]
          Length = 1166

 Score = 52.4 bits (124), Expect(3) = 4e-16
 Identities = 32/67 (47%), Positives = 40/67 (59%)
 Frame = -1

Query: 449 IKIDAATGSGKTLAFVVPLVEILRRSSSQCKGMHLQTSFPLNETLDRSLIQYIC*VLFDY 270
           + +DAATGSGKTLAFV+PLVEILRRS+S     H      ++ T + S   Y     F  
Sbjct: 59  VAVDAATGSGKTLAFVLPLVEILRRSTSYPPKPHQVMGVIISPTRELSTQIYNVAQPFSV 118

Query: 269 LLLFGTD 249
           LL+ G D
Sbjct: 119 LLVGGRD 125



 Score = 49.3 bits (116), Expect(3) = 4e-16
 Identities = 27/65 (41%), Positives = 37/65 (56%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKLEPASFKTPL 16
           +N I++R  KQ RT +FSAT TE VEE+AKAGLR           ++    +  + K P 
Sbjct: 183 VNSIISRLPKQRRTGLFSATQTEGVEEMAKAGLRNPVRVEVRAESKSASSNQLINSKIPS 242

Query: 15  GLEME 1
           GL +E
Sbjct: 243 GLHLE 247



 Score = 29.3 bits (64), Expect(3) = 4e-16
 Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIN 197
           +ILILDEADRLL  G +KQ+N
Sbjct: 164 EILILDEADRLLEMGFQKQVN 184


>gb|KRH33480.1| hypothetical protein GLYMA_10G125300 [Glycine max]
          Length = 254

 Score = 45.1 bits (105), Expect(3) = 4e-10
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -1

Query: 449 IKIDAATGSGKTLAFVVPLVEILRRSSSQCK 357
           + ++AATG GKTLAFV+PLVEIL RSSS  K
Sbjct: 13  VNVNAATGFGKTLAFVIPLVEILCRSSSHPK 43



 Score = 38.1 bits (87), Expect(3) = 4e-10
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = -3

Query: 234 RLIGSWGRKSR*MINPIVTR*LKQHRTSIFSATHTEAVEELAKAGLR 94
           RL+G   +K    I  I+T   K  RTS+FS T  EA+EELAKA LR
Sbjct: 101 RLLGMGFQKH---ITSIITLLPKLQRTSLFSTTQIEAIEELAKARLR 144



 Score = 26.9 bits (58), Expect(3) = 4e-10
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -2

Query: 292 FVKFYLIIYFCLGQILILDEADRLLG 215
           F +  L +   L +I ILDEADRLLG
Sbjct: 79  FEREKLFLRKMLNRIFILDEADRLLG 104


>ref|XP_008363770.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           18-like [Malus domestica]
          Length = 577

 Score = 51.6 bits (122), Expect(2) = 5e-08
 Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKL---EPASFK 25
           IN I++R  K  RT +FSAT TEAVEELA+AGLR           ++ D +   + AS K
Sbjct: 176 INDIMSRLPKLRRTGLFSATQTEAVEELARAGLRNPVRVEVXAETKSSDSILRKQLASSK 235

Query: 24  TPLGLEME 1
           TP GL +E
Sbjct: 236 TPSGLALE 243



 Score = 32.0 bits (71), Expect(2) = 5e-08
 Identities = 17/22 (77%), Positives = 19/22 (86%), Gaps = 2/22 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIND 194
           +ILILDEADRLL  G +KQIND
Sbjct: 157 EILILDEADRLLDMGFQKQIND 178


>ref|XP_006290198.1| hypothetical protein CARUB_v10003883mg [Capsella rubella]
           gi|482558904|gb|EOA23096.1| hypothetical protein
           CARUB_v10003883mg [Capsella rubella]
          Length = 595

 Score = 53.5 bits (127), Expect(2) = 9e-08
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKLEPASFKTPL 16
           +N I++R  KQ RT +FSAT TE VEELAKAGLR            ++   + A+ +TP 
Sbjct: 190 VNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAESNSESSQQLANSRTPS 249

Query: 15  GLEME 1
           GL +E
Sbjct: 250 GLHLE 254



 Score = 29.3 bits (64), Expect(2) = 9e-08
 Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIN 197
           +ILILDEADRLL  G +KQ+N
Sbjct: 171 EILILDEADRLLEMGFQKQVN 191


>ref|XP_010257043.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18 [Nelumbo
           nucifera]
          Length = 593

 Score = 53.1 bits (126), Expect(2) = 9e-08
 Identities = 33/69 (47%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKL----EPASF 28
           IN I++R  K  RT +FSAT TEAVEEL KAGLR           +  D+L    +P+S 
Sbjct: 189 INSIISRLPKLRRTGLFSATQTEAVEELTKAGLRNPVRVEVRTEAKVLDELASSQQPSSS 248

Query: 27  KTPLGLEME 1
           K PLGL  E
Sbjct: 249 KMPLGLHNE 257



 Score = 29.6 bits (65), Expect(2) = 9e-08
 Identities = 16/21 (76%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIN 197
           +ILILDEADRLL  G +KQIN
Sbjct: 170 EILILDEADRLLDMGFQKQIN 190


>ref|XP_010491077.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18 [Camelina sativa]
          Length = 618

 Score = 52.0 bits (123), Expect(2) = 3e-07
 Identities = 28/65 (43%), Positives = 39/65 (60%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKLEPASFKTPL 16
           +N I++R  KQ RT +FSAT TE VEELAKAGLR           +++   +  + +TP 
Sbjct: 213 VNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAESKSESSQQLTNSRTPS 272

Query: 15  GLEME 1
           GL +E
Sbjct: 273 GLHLE 277



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIN 197
           +ILILDEADRLL  G +KQ+N
Sbjct: 194 EILILDEADRLLEMGFQKQVN 214


>gb|KFK24964.1| hypothetical protein AALP_AA8G048500 [Arabis alpina]
          Length = 596

 Score = 52.0 bits (123), Expect(2) = 3e-07
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKLEPASFKTPL 16
           +N I++R  KQ RT +FSAT TE V ELAKAGLR           +++   + A+ KTP 
Sbjct: 188 VNSIISRLPKQRRTGLFSATQTEGVVELAKAGLRNPVRVEVRTESKSESSQQLANSKTPS 247

Query: 15  GLEME 1
           GL +E
Sbjct: 248 GLYLE 252



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIN 197
           +ILILDEADRLL  G +KQ+N
Sbjct: 169 EILILDEADRLLEMGFQKQVN 189


>ref|NP_196164.1| DEAD-box ATP-dependent RNA helicase 18 [Arabidopsis thaliana]
           gi|75334017|sp|Q9FLB0.1|RH18_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 18
           gi|10176757|dbj|BAB09988.1| ATP-dependent RNA
           helicase-like protein [Arabidopsis thaliana]
           gi|332003492|gb|AED90875.1| DEAD-box ATP-dependent RNA
           helicase 18 [Arabidopsis thaliana]
          Length = 593

 Score = 53.1 bits (126), Expect(2) = 3e-07
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKLEPASFKTPL 16
           +N I++R  KQ RT +FSAT TE VEELAKAGLR           +++   +  + KTP 
Sbjct: 188 VNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPS 247

Query: 15  GLEME 1
           GL +E
Sbjct: 248 GLHLE 252



 Score = 28.1 bits (61), Expect(2) = 3e-07
 Identities = 14/21 (66%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIN 197
           +ILILDEADRLL  G ++Q+N
Sbjct: 169 EILILDEADRLLEMGFQRQVN 189


>ref|XP_010452447.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Camelina
           sativa]
          Length = 593

 Score = 52.0 bits (123), Expect(2) = 3e-07
 Identities = 28/65 (43%), Positives = 39/65 (60%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKLEPASFKTPL 16
           +N I++R  KQ RT +FSAT TE VEELAKAGLR           +++   +  + +TP 
Sbjct: 188 VNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAESKSESSQQLTNSRTPS 247

Query: 15  GLEME 1
           GL +E
Sbjct: 248 GLHLE 252



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIN 197
           +ILILDEADRLL  G +KQ+N
Sbjct: 169 EILILDEADRLLEMGFQKQVN 189


>ref|XP_002871160.1| hypothetical protein ARALYDRAFT_908458 [Arabidopsis lyrata subsp.
           lyrata] gi|297316997|gb|EFH47419.1| hypothetical protein
           ARALYDRAFT_908458 [Arabidopsis lyrata subsp. lyrata]
          Length = 593

 Score = 52.8 bits (125), Expect(2) = 3e-07
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKLEPASFKTPL 16
           +N I++R  KQ RT +FSAT TE VEELAKAGLR           +++   +  + KTP 
Sbjct: 188 VNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQFTNSKTPS 247

Query: 15  GLEME 1
           GL +E
Sbjct: 248 GLHLE 252



 Score = 28.1 bits (61), Expect(2) = 3e-07
 Identities = 14/21 (66%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIN 197
           +ILILDEADRLL  G ++Q+N
Sbjct: 169 EILILDEADRLLEMGFQRQVN 189


>ref|XP_010423471.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Camelina
           sativa]
          Length = 593

 Score = 51.6 bits (122), Expect(2) = 3e-07
 Identities = 28/65 (43%), Positives = 39/65 (60%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKLEPASFKTPL 16
           +N I++R  KQ RT +FSAT TE VEELAKAGLR           +++   +  + +TP 
Sbjct: 188 VNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAESKSESTQQLTNSRTPS 247

Query: 15  GLEME 1
           GL +E
Sbjct: 248 GLHLE 252



 Score = 29.3 bits (64), Expect(2) = 3e-07
 Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIN 197
           +ILILDEADRLL  G +KQ+N
Sbjct: 169 EILILDEADRLLEMGFQKQVN 189


>ref|XP_009345377.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Pyrus x
           bretschneideri]
          Length = 591

 Score = 49.7 bits (117), Expect(2) = 3e-07
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKD---KLEPASFK 25
           +N I++R  K  RT +FSAT TEAVEELA+AGLR           ++ D   + + AS K
Sbjct: 188 LNDIMSRLPKLRRTGLFSATQTEAVEELARAGLRNPVRVEVRAETKSSDSAFRKKLASSK 247

Query: 24  TPLGLEME 1
           TP GL +E
Sbjct: 248 TPSGLALE 255



 Score = 31.2 bits (69), Expect(2) = 3e-07
 Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 2/22 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIND 194
           +ILILDEADRLL  G +KQ+ND
Sbjct: 169 EILILDEADRLLDMGFQKQLND 190


>ref|XP_008374333.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18 [Malus domestica]
          Length = 591

 Score = 49.3 bits (116), Expect(2) = 4e-07
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKD---KLEPASFK 25
           +N I++R  K  RT +FSAT TEAVEELA+AGLR           ++ D   + + AS K
Sbjct: 188 LNDIMSRLPKLRRTGLFSATQTEAVEELARAGLRNPVRVEVRAETKSXDSALRKKLASSK 247

Query: 24  TPLGLEME 1
           TP GL +E
Sbjct: 248 TPSGLALE 255



 Score = 31.2 bits (69), Expect(2) = 4e-07
 Identities = 16/22 (72%), Positives = 19/22 (86%), Gaps = 2/22 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIND 194
           +ILILDEADRLL  G +KQ+ND
Sbjct: 169 EILILDEADRLLDMGFQKQLND 190


>ref|XP_006399006.1| hypothetical protein EUTSA_v10013039mg [Eutrema salsugineum]
           gi|557100096|gb|ESQ40459.1| hypothetical protein
           EUTSA_v10013039mg [Eutrema salsugineum]
          Length = 595

 Score = 51.2 bits (121), Expect(2) = 6e-07
 Identities = 28/65 (43%), Positives = 38/65 (58%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKLEPASFKTPL 16
           +N I++R  KQ RT +FSAT TE VEELAKAGLR           +++   +  + K P 
Sbjct: 188 VNSIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAESKSEPSQQLTNSKIPS 247

Query: 15  GLEME 1
           GL +E
Sbjct: 248 GLHLE 252



 Score = 28.9 bits (63), Expect(2) = 6e-07
 Identities = 14/21 (66%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIN 197
           +IL+LDEADRLL  G +KQ+N
Sbjct: 169 EILVLDEADRLLEMGFQKQVN 189


>ref|XP_008233812.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18 [Prunus mume]
          Length = 595

 Score = 48.1 bits (113), Expect(2) = 6e-07
 Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKL---EPASFK 25
           IN I++R  K  RT +FSAT TEAVEELA+AGLR           ++ +     + AS K
Sbjct: 192 INDIMSRLPKLRRTGLFSATQTEAVEELARAGLRNPVRVEVRAETKSNNSALSQQLASSK 251

Query: 24  TPLGLEME 1
           TP GL +E
Sbjct: 252 TPSGLAIE 259



 Score = 32.0 bits (71), Expect(2) = 6e-07
 Identities = 17/22 (77%), Positives = 19/22 (86%), Gaps = 2/22 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIND 194
           +ILILDEADRLL  G +KQIND
Sbjct: 173 EILILDEADRLLDMGFQKQIND 194


>ref|XP_010558064.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18 [Tarenaya
           hassleriana]
          Length = 592

 Score = 50.8 bits (120), Expect(2) = 6e-07
 Identities = 30/65 (46%), Positives = 37/65 (56%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKLEPASFKTPL 16
           +N IV+R  K  RT +FSAT TE V ELAKAGLR           +A    + A+ KTP 
Sbjct: 189 VNYIVSRLPKLRRTGLFSATQTEGVAELAKAGLRNPVRVEVRAESKANSSQQLANSKTPS 248

Query: 15  GLEME 1
           GL +E
Sbjct: 249 GLHLE 253



 Score = 29.3 bits (64), Expect(2) = 6e-07
 Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIN 197
           +ILILDEADRLL  G +KQ+N
Sbjct: 170 EILILDEADRLLEMGFQKQVN 190


>ref|XP_007220555.1| hypothetical protein PRUPE_ppa003226mg [Prunus persica]
           gi|462417017|gb|EMJ21754.1| hypothetical protein
           PRUPE_ppa003226mg [Prunus persica]
          Length = 591

 Score = 48.1 bits (113), Expect(2) = 6e-07
 Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKL---EPASFK 25
           IN I++R  K  RT +FSAT TEAVEELA+AGLR           ++ +     + AS K
Sbjct: 188 INDIMSRLPKLRRTGLFSATQTEAVEELARAGLRNPVRVEVRAETKSNNSALSQQLASSK 247

Query: 24  TPLGLEME 1
           TP GL +E
Sbjct: 248 TPSGLAIE 255



 Score = 32.0 bits (71), Expect(2) = 6e-07
 Identities = 17/22 (77%), Positives = 19/22 (86%), Gaps = 2/22 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIND 194
           +ILILDEADRLL  G +KQIND
Sbjct: 169 EILILDEADRLLDMGFQKQIND 190


>dbj|BAF00189.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
          Length = 520

 Score = 53.1 bits (126), Expect(2) = 2e-06
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXEAKDKLEPASFKTPL 16
           +N I++R  KQ RT +FSAT TE VEELAKAGLR           +++   +  + KTP 
Sbjct: 188 VNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPS 247

Query: 15  GLEME 1
           GL +E
Sbjct: 248 GLHLE 252



 Score = 25.4 bits (54), Expect(2) = 2e-06
 Identities = 13/21 (61%), Positives = 17/21 (80%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLLGS--EKQIN 197
           +ILILDEADRLL    ++Q+N
Sbjct: 169 EILILDEADRLLEMRFQRQVN 189


>ref|XP_009764877.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18 isoform X1
           [Nicotiana sylvestris]
          Length = 594

 Score = 47.4 bits (111), Expect(2) = 2e-06
 Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGL----RYXXXXXXXXXXEAKDKLEPASF 28
           IN I++R  K  RT +FSAT TEAVEEL+KAGL    R            +      AS 
Sbjct: 185 INSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKQLNGSASSGNSASS 244

Query: 27  KTPLGLEME 1
           KTP GL +E
Sbjct: 245 KTPSGLHIE 253



 Score = 30.8 bits (68), Expect(2) = 2e-06
 Identities = 17/21 (80%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIN 197
           +ILILDEADRLL  G EKQIN
Sbjct: 166 EILILDEADRLLEMGFEKQIN 186


>ref|XP_009764878.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18 isoform X2
           [Nicotiana sylvestris]
          Length = 365

 Score = 47.4 bits (111), Expect(2) = 2e-06
 Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
 Frame = -3

Query: 195 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGL----RYXXXXXXXXXXEAKDKLEPASF 28
           IN I++R  K  RT +FSAT TEAVEEL+KAGL    R            +      AS 
Sbjct: 185 INSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKQLNGSASSGNSASS 244

Query: 27  KTPLGLEME 1
           KTP GL +E
Sbjct: 245 KTPSGLHIE 253



 Score = 30.8 bits (68), Expect(2) = 2e-06
 Identities = 17/21 (80%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
 Frame = -2

Query: 253 QILILDEADRLL--GSEKQIN 197
           +ILILDEADRLL  G EKQIN
Sbjct: 166 EILILDEADRLLEMGFEKQIN 186


Top