BLASTX nr result
ID: Papaver29_contig00015548
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00015548
(1583 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008803030.1| PREDICTED: DNA-directed RNA polymerase III s... 213 2e-93
ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III s... 214 7e-93
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 214 9e-92
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 214 9e-92
ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s... 215 2e-91
ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III s... 215 8e-91
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 202 7e-89
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 207 2e-88
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 213 2e-88
gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria ital... 213 2e-88
ref|XP_011005565.1| PREDICTED: DNA-directed RNA polymerase III s... 213 2e-88
ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 207 2e-88
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 204 5e-87
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 204 5e-87
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 208 5e-87
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 208 5e-87
gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sin... 204 5e-87
ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III s... 199 1e-86
ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III s... 199 1e-86
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 206 2e-85
>ref|XP_008803030.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Phoenix
dactylifera]
Length = 1018
Score = 213 bits (543), Expect(2) = 2e-93
Identities = 108/158 (68%), Positives = 124/158 (78%)
Frame = +3
Query: 942 YEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMSI 1121
Y + VEGTNL AV+GT G++G T SNH+IEVQ+TLG Q+ M+ + MSI
Sbjct: 860 YNLLVEGTNLLAVIGTPGINGSKTKSNHVIEVQQTLGIEAARQCIINEIQYTMRNHGMSI 919
Query: 1122 DVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIEG 1301
D RHMMLLAD+MT +GEVLGITRFGI KMK+SVLMLASFEKT +HLFN S NGR D IEG
Sbjct: 920 DARHMMLLADLMTYRGEVLGITRFGISKMKDSVLMLASFEKTAEHLFNASYNGRNDQIEG 979
Query: 1302 VSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIM 1415
VSECIIMGIPMQLGTGILKVRQRVE LP+L Y +PI+
Sbjct: 980 VSECIIMGIPMQLGTGILKVRQRVEQLPELTYRPDPII 1017
Score = 159 bits (401), Expect(2) = 2e-93
Identities = 87/159 (54%), Positives = 111/159 (69%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIIN AKNISTPII A L DRDV SARMVK S+EKTVLGE+A+++KIVL+S
Sbjct: 704 TLGVPRIKEIINAAKNISTPIITATLVSDRDVISARMVKSSLEKTVLGEVAKAIKIVLKS 763
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
YI VKLDME I ++IS+ SVQQ +++ VL + +LK
Sbjct: 764 SQPYIAVKLDMERIEALHMRISSQSVQQ--------AILNHPKIKLKPEHIRVLGNNNLK 815
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVS 909
I PE DR+K+ F LHSLK++LP+V+V G+ TVER +++
Sbjct: 816 IYPPEADRSKLQFELHSLKAVLPKVIVKGIATVERAVIN 854
>ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Elaeis
guineensis]
Length = 1369
Score = 214 bits (546), Expect(2) = 7e-93
Identities = 109/158 (68%), Positives = 124/158 (78%)
Frame = +3
Query: 942 YEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMSI 1121
Y + VEGTNL AVMGT G+DG T SNHIIEVQ+T+G Q+ M+ + MSI
Sbjct: 1211 YNLLVEGTNLLAVMGTPGIDGSKTKSNHIIEVQQTIGIEAARQCIINEIQYTMRNHGMSI 1270
Query: 1122 DVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIEG 1301
D RHMMLLAD+MT +GEVLGITRFGI KMK+SVLMLASFEKT +HLFN S +GR D IEG
Sbjct: 1271 DARHMMLLADLMTYRGEVLGITRFGISKMKDSVLMLASFEKTAEHLFNASYSGRNDQIEG 1330
Query: 1302 VSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIM 1415
VSECIIMGIPMQLGTGILKVRQRVE LP+L Y +PI+
Sbjct: 1331 VSECIIMGIPMQLGTGILKVRQRVEQLPELKYRPDPII 1368
Score = 156 bits (394), Expect(2) = 7e-93
Identities = 85/159 (53%), Positives = 110/159 (69%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIIN AKNISTPII A L DRDV SARMV+ S++KTVLGE+A+++KIVL+S
Sbjct: 1055 TLGVPRIKEIINAAKNISTPIITATLVSDRDVLSARMVRSSLQKTVLGEVAKAIKIVLKS 1114
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
YI VKLDME I ++IS+ SVQQ +++ VL + LK
Sbjct: 1115 SQPYIVVKLDMERIEALHMRISSQSVQQ--------AILNHPKTKLKPEHIRVLGNNKLK 1166
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVS 909
I PE DR+K+ F LHSLK++LP+V+V G+ TVER +++
Sbjct: 1167 IYPPEADRSKLQFELHSLKAVLPKVIVKGIATVERAVIN 1205
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 214 bits (544), Expect(2) = 9e-92
Identities = 109/160 (68%), Positives = 127/160 (79%)
Frame = +3
Query: 939 EYEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMS 1118
+Y + VEGT L+ VMGT GV G TTSNHIIEVQ+TLG Q+ M + MS
Sbjct: 1660 KYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMS 1719
Query: 1119 IDVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIE 1298
ID+RHMMLLAD+MT +GEVLGITRFGIQKM +SVLMLASFEKT DHLFN S++GR D IE
Sbjct: 1720 IDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIE 1779
Query: 1299 GVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
GVSECIIMGIPMQLGTGILKVRQR++ +P+L YG +PI+S
Sbjct: 1780 GVSECIIMGIPMQLGTGILKVRQRLQQVPELSYGLDPIIS 1819
Score = 153 bits (386), Expect(2) = 9e-92
Identities = 84/163 (51%), Positives = 114/163 (69%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIINGAK ISTPII A LEC+ +V++ARMVKG IE+T LG++A+S+KIVL S
Sbjct: 1505 TLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTS 1564
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
R A I V LDME I+ SQL I + V++ +Q+++VLD L+
Sbjct: 1565 RLALIAVALDMEGIQASQLSIDSNIVRE--------SILRNRRIKLKQQHIKVLDAGKLE 1616
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENRK 921
+ P+ DR+ IHF LH+LK++LP VVV G+ TVER +++++ K
Sbjct: 1617 VH-PQGDRSTIHFELHALKNLLPTVVVKGIETVERAVINKDNK 1658
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Vitis
vinifera]
Length = 1383
Score = 214 bits (544), Expect(2) = 9e-92
Identities = 109/160 (68%), Positives = 127/160 (79%)
Frame = +3
Query: 939 EYEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMS 1118
+Y + VEGT L+ VMGT GV G TTSNHIIEVQ+TLG Q+ M + MS
Sbjct: 1224 KYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMS 1283
Query: 1119 IDVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIE 1298
ID+RHMMLLAD+MT +GEVLGITRFGIQKM +SVLMLASFEKT DHLFN S++GR D IE
Sbjct: 1284 IDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIE 1343
Query: 1299 GVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
GVSECIIMGIPMQLGTGILKVRQR++ +P+L YG +PI+S
Sbjct: 1344 GVSECIIMGIPMQLGTGILKVRQRLQQVPELSYGLDPIIS 1383
Score = 153 bits (386), Expect(2) = 9e-92
Identities = 84/163 (51%), Positives = 114/163 (69%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIINGAK ISTPII A LEC+ +V++ARMVKG IE+T LG++A+S+KIVL S
Sbjct: 1069 TLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTS 1128
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
R A I V LDME I+ SQL I + V++ +Q+++VLD L+
Sbjct: 1129 RLALIAVALDMEGIQASQLSIDSNIVRE--------SILRNRRIKLKQQHIKVLDAGKLE 1180
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENRK 921
+ P+ DR+ IHF LH+LK++LP VVV G+ TVER +++++ K
Sbjct: 1181 VH-PQGDRSTIHFELHALKNLLPTVVVKGIETVERAVINKDNK 1222
>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
nucifera]
Length = 1392
Score = 215 bits (548), Expect(2) = 2e-91
Identities = 111/160 (69%), Positives = 124/160 (77%)
Frame = +3
Query: 939 EYEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMS 1118
+Y + VEGTNL VMGT GVDGC TTSNHIIEVQ TLG Q+ M ++ M
Sbjct: 1233 KYNLLVEGTNLLGVMGTPGVDGCKTTSNHIIEVQGTLGIEAARRCIIDEIQYTMGKHGMD 1292
Query: 1119 IDVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIE 1298
ID+RHMMLLAD+MT KGEVLGITR GIQKMKESVLMLASFEKT DHLFN S+NGR D IE
Sbjct: 1293 IDIRHMMLLADLMTYKGEVLGITRTGIQKMKESVLMLASFEKTADHLFNASVNGRDDKIE 1352
Query: 1299 GVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
GVSECII+GIPMQ+GTGILKV QR +PQL Y +PI+S
Sbjct: 1353 GVSECIILGIPMQIGTGILKVIQRYPQVPQLSYKPDPIIS 1392
Score = 150 bits (380), Expect(2) = 2e-91
Identities = 82/164 (50%), Positives = 113/164 (68%), Gaps = 2/164 (1%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIINGAKNISTPII A LECD +V+SAR+VKG IEKTVLGE+A+S+KIV+
Sbjct: 1078 TLGVPRIKEIINGAKNISTPIITATLECDDNVKSARIVKGCIEKTVLGEVAKSIKIVMTQ 1137
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
R A I + LDM I +QLKISA SV++ +++ D+ K
Sbjct: 1138 RQASIVISLDMARIEAAQLKISADSVKESILKHLNPKFKP-----------KIVVDKGYK 1186
Query: 793 --IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENR 918
+ E DR+K+HF LH+LK++LP+V+V G+ TV+R ++++++
Sbjct: 1187 LIVIPTESDRSKLHFELHNLKAVLPQVIVKGISTVQRAVINKSK 1230
>ref|XP_009402242.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Musa
acuminata subsp. malaccensis]
Length = 1372
Score = 215 bits (547), Expect(2) = 8e-91
Identities = 111/159 (69%), Positives = 122/159 (76%)
Frame = +3
Query: 942 YEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMSI 1121
Y + VEGTNL AVMGT G+D T SNH+IEVQ TLG Q+ M+ + MSI
Sbjct: 1214 YNLLVEGTNLLAVMGTPGIDASKTRSNHVIEVQRTLGIEAARQCIINEIQYTMRGHGMSI 1273
Query: 1122 DVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIEG 1301
D RHMMLLAD+MT KGEVLGITRFGI KMKESVLMLASFEKT +HLFN S GR D IEG
Sbjct: 1274 DTRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYGGRDDQIEG 1333
Query: 1302 VSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
VSECIIMGIPMQLGTGILKVRQRVE LP+L Y +PI+S
Sbjct: 1334 VSECIIMGIPMQLGTGILKVRQRVEKLPELKYAPDPIIS 1372
Score = 149 bits (375), Expect(2) = 8e-91
Identities = 81/160 (50%), Positives = 106/160 (66%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIIN +KNISTPI+ A L RDV SAR+VK IEKTVLGE+A+++KIVL+S
Sbjct: 1058 TLGVPRIKEIINASKNISTPIVTATLLNGRDVLSARVVKSCIEKTVLGEVAKALKIVLKS 1117
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
YI VKLDM+LI +++SA SV +++ + LK
Sbjct: 1118 SRPYIVVKLDMDLIEALHMRVSAESV--------CHSILNHPKIKLKSEHINNIGSDKLK 1169
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSE 912
I PE DR K+ F +HSLK+MLP+V+V G+PTVER +++E
Sbjct: 1170 IYPPEADRRKLQFEMHSLKAMLPKVIVKGIPTVERAVINE 1209
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 202 bits (513), Expect(2) = 7e-89
Identities = 103/160 (64%), Positives = 119/160 (74%)
Frame = +3
Query: 939 EYEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMS 1118
+Y + VEGTNL+AVMGT GVDG TTSNHI E E LG Q+ M + MS
Sbjct: 1234 KYNLLVEGTNLKAVMGTEGVDGRETTSNHIFETVEVLGIEAARNGIIKEIQYTMGSHGMS 1293
Query: 1119 IDVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIE 1298
ID RHMMLLADVMT +GE+LGITRFG+ KMK+SVLMLASFEKT DHLF S++GR D IE
Sbjct: 1294 IDQRHMMLLADVMTYRGEILGITRFGMAKMKDSVLMLASFEKTTDHLFAASVHGRTDQIE 1353
Query: 1299 GVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
GVSECIIMGIPM LGTG+ KVRQ+V +P+L YG P+ S
Sbjct: 1354 GVSECIIMGIPMPLGTGLFKVRQKVGRIPKLIYGPPPLFS 1393
Score = 155 bits (392), Expect(2) = 7e-89
Identities = 82/162 (50%), Positives = 113/162 (69%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIIN +K ISTPII AKL + DV++AR+VKG IEKT LG++A+S+KIVL
Sbjct: 1076 TLGVPRIKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGDVAKSIKIVLRP 1135
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
A++ +KLDM+ I QL I A +V + EQ+V+V DDRS+
Sbjct: 1136 GQAFVSIKLDMDRIYSLQLDIRAETVAE-----AVLKFPKIKSMKLKEQHVKVNDDRSIS 1190
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENR 918
+ +PE DR K+ FALHSL++MLP+V+V G+PTVER ++++ +
Sbjct: 1191 LTTPESDRKKMLFALHSLQNMLPKVIVKGIPTVERAVINQEK 1232
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Cucumis
sativus]
Length = 1400
Score = 207 bits (528), Expect(2) = 2e-88
Identities = 106/160 (66%), Positives = 123/160 (76%)
Frame = +3
Query: 939 EYEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMS 1118
++ + VEGT L+AVMGT GVDGCNT SNHIIEVQ+ LG ++ M+ + MS
Sbjct: 1241 KFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMS 1300
Query: 1119 IDVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIE 1298
ID+RHMMLL D+MT +GEVLGITRFGIQKM +SVLMLASFEKT DHLFN S+NGR D IE
Sbjct: 1301 IDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIE 1360
Query: 1299 GVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
GVSEC+IMGIPM LGTG+LKVRQRV QL YG I+S
Sbjct: 1361 GVSECVIMGIPMPLGTGMLKVRQRVSVPQQLPYGPPAILS 1400
Score = 148 bits (374), Expect(2) = 2e-88
Identities = 82/166 (49%), Positives = 107/166 (64%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIINGAK ISTPI+ A L D +V ARMVK IEKT LG+IA+ ++IV+ S
Sbjct: 1080 TLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSS 1139
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
R A I +KLDME IR ++L + A V+Q +++ VLDDR L+
Sbjct: 1140 RSALIEIKLDMEKIRDAELYVDANVVKQ--------AILVTPKLKLKHEHINVLDDRKLR 1191
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENRKRAR 930
+ + DR K+HF LH LK+MLP VVV G+ TV R ++ E + +AR
Sbjct: 1192 VLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDKAR 1237
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Setaria
italica]
Length = 1397
Score = 213 bits (542), Expect(2) = 2e-88
Identities = 109/160 (68%), Positives = 125/160 (78%)
Frame = +3
Query: 939 EYEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMS 1118
+Y + VEGTNL AVMGT GVD NT SNHI+E+ TLG Q+ MK + M+
Sbjct: 1238 KYNLLVEGTNLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMN 1297
Query: 1119 IDVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIE 1298
IDVRHMMLLAD+MT KGEVLGITR+GI KMK SVLMLASFEKT +HLFN S +GR D IE
Sbjct: 1298 IDVRHMMLLADLMTYKGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIE 1357
Query: 1299 GVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
GVSECIIMGIPMQLGTGILKVRQR++HLP+L Y +PI+S
Sbjct: 1358 GVSECIIMGIPMQLGTGILKVRQRLDHLPELKYQPDPILS 1397
Score = 143 bits (360), Expect(2) = 2e-88
Identities = 79/167 (47%), Positives = 108/167 (64%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIIN AK ISTPII +L +DV SAR+VKG++EK VLGE+A ++KIVL+S
Sbjct: 1078 TLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKS 1137
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
+ VKLDM+LI + ISA SVQ ++V V+D L+
Sbjct: 1138 SQPNLVVKLDMQLIEALHMGISADSVQ--------LSILNHPKIKLKSEHVRVIDRAKLR 1189
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENRKRARV 933
I D++K+ LH+LK+MLP+V+V G+PTVERV++ E +K ++
Sbjct: 1190 IYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKL 1236
>gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria italica]
Length = 1394
Score = 213 bits (542), Expect(2) = 2e-88
Identities = 109/160 (68%), Positives = 125/160 (78%)
Frame = +3
Query: 939 EYEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMS 1118
+Y + VEGTNL AVMGT GVD NT SNHI+E+ TLG Q+ MK + M+
Sbjct: 1235 KYNLLVEGTNLLAVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMN 1294
Query: 1119 IDVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIE 1298
IDVRHMMLLAD+MT KGEVLGITR+GI KMK SVLMLASFEKT +HLFN S +GR D IE
Sbjct: 1295 IDVRHMMLLADLMTYKGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIE 1354
Query: 1299 GVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
GVSECIIMGIPMQLGTGILKVRQR++HLP+L Y +PI+S
Sbjct: 1355 GVSECIIMGIPMQLGTGILKVRQRLDHLPELKYQPDPILS 1394
Score = 143 bits (360), Expect(2) = 2e-88
Identities = 79/167 (47%), Positives = 108/167 (64%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIIN AK ISTPII +L +DV SAR+VKG++EK VLGE+A ++KIVL+S
Sbjct: 1075 TLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKS 1134
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
+ VKLDM+LI + ISA SVQ ++V V+D L+
Sbjct: 1135 SQPNLVVKLDMQLIEALHMGISADSVQ--------LSILNHPKIKLKSEHVRVIDRAKLR 1186
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENRKRARV 933
I D++K+ LH+LK+MLP+V+V G+PTVERV++ E +K ++
Sbjct: 1187 IYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKL 1233
>ref|XP_011005565.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Populus
euphratica]
Length = 1410
Score = 213 bits (542), Expect(2) = 2e-88
Identities = 108/160 (67%), Positives = 127/160 (79%)
Frame = +3
Query: 939 EYEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMS 1118
+Y +FVEGT L+AVMGT GVDG T SNHIIEVQETLG + M+ + MS
Sbjct: 1251 KYNMFVEGTGLQAVMGTDGVDGRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESHGMS 1310
Query: 1119 IDVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIE 1298
ID+RHMMLLADVMTS+G VLGITRFGIQKM +SVLMLASFEKT DHLFN S+ G+ D IE
Sbjct: 1311 IDIRHMMLLADVMTSRGVVLGITRFGIQKMDKSVLMLASFEKTSDHLFNASVKGKDDKIE 1370
Query: 1299 GVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
GVSECIIMGIP+ +GTG+LK++QRV+ LP LDYG +PI+S
Sbjct: 1371 GVSECIIMGIPVAIGTGVLKIQQRVDPLPMLDYGLDPIIS 1410
Score = 142 bits (359), Expect(2) = 2e-88
Identities = 79/162 (48%), Positives = 109/162 (67%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
T GVPRIKEIINGAK ISTPII +LE + +V +AR++KG I+KTVLG++A+S+KIV+ S
Sbjct: 1087 TQGVPRIKEIINGAKRISTPIITVELEHNSNVNAARIIKGRIQKTVLGQVAKSIKIVMTS 1146
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
R A + V LDM+ IR +QL + A V++ Q + VL+D L+
Sbjct: 1147 RSASVKVTLDMKTIREAQLSLDANIVRELILETPKIKRKL--------QRINVLEDGKLE 1198
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENR 918
+ P DR K+HF LHSLK+MLP VVV G+ TVERV++++ +
Sbjct: 1199 V-FPGGDRNKLHFELHSLKNMLPAVVVKGIKTVERVVIAQKK 1239
>ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit rpc1 [Cucumis melo]
Length = 1400
Score = 207 bits (527), Expect(2) = 2e-88
Identities = 106/160 (66%), Positives = 123/160 (76%)
Frame = +3
Query: 939 EYEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMS 1118
++ + VEGT L+AVMGT GVDGCNT SNHIIEVQ+ LG ++ M+ + MS
Sbjct: 1241 KFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMS 1300
Query: 1119 IDVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIE 1298
ID+RHMMLL D+MT +GEVLGITRFGIQKM +SVLMLASFEKT DHLFN S+NGR D IE
Sbjct: 1301 IDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIE 1360
Query: 1299 GVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
GVSEC+IMGIPM LGTG+LKVRQRV QL YG I+S
Sbjct: 1361 GVSECVIMGIPMPLGTGMLKVRQRVSVPRQLPYGPPAILS 1400
Score = 148 bits (374), Expect(2) = 2e-88
Identities = 82/166 (49%), Positives = 107/166 (64%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIINGAK ISTPI+ A L D +V ARMVK IEKT LG+IA+ ++IV+ S
Sbjct: 1080 TLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSS 1139
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
R A I +KLDME IR ++L + A V+Q +++ VLDDR L+
Sbjct: 1140 RSALIEIKLDMEKIRDAELYVDANVVKQ--------AILVTPKLKLKHEHINVLDDRKLR 1191
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENRKRAR 930
+ + DR K+HF LH LK+MLP VVV G+ TV R ++ E + +AR
Sbjct: 1192 VLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDKAR 1237
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 204 bits (520), Expect(2) = 5e-87
Identities = 108/161 (67%), Positives = 120/161 (74%), Gaps = 1/161 (0%)
Frame = +3
Query: 939 EYEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMS 1118
+Y + VEGT L+AVMG G+DGC T SNHI EVQ+TLG MK + MS
Sbjct: 1244 KYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMS 1303
Query: 1119 IDVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIE 1298
ID RHMMLLAD+MT +GEVLGITRFGIQKM +SVLMLASFEKT DHLFN S+NGR D IE
Sbjct: 1304 IDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIE 1363
Query: 1299 GVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYG-KEPIMS 1418
GVSECIIMGIPM LGTGILK+RQR P L YG +PIMS
Sbjct: 1364 GVSECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDPIMS 1404
Score = 146 bits (369), Expect(2) = 5e-87
Identities = 83/166 (50%), Positives = 115/166 (69%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
T GVPRIKEIINGAK ISTPII A+LEC+ + +AR+VKG IEKT+LG++A+S+KIV+ S
Sbjct: 1078 TQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTS 1137
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
R A I + LDME I+ + L I+A V++ +Q+++VLD R L+
Sbjct: 1138 RLASIVIALDMETIQDAHLCINADIVKE--------SIVQTPKIKLKQQHIKVLDFRKLE 1189
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENRKRAR 930
I P D++KIHF L+SLK++LP V+V G+ TVERV+++E K R
Sbjct: 1190 I-FPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKR 1234
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 204 bits (520), Expect(2) = 5e-87
Identities = 108/161 (67%), Positives = 120/161 (74%), Gaps = 1/161 (0%)
Frame = +3
Query: 939 EYEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMS 1118
+Y + VEGT L+AVMG G+DGC T SNHI EVQ+TLG MK + MS
Sbjct: 1237 KYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMS 1296
Query: 1119 IDVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIE 1298
ID RHMMLLAD+MT +GEVLGITRFGIQKM +SVLMLASFEKT DHLFN S+NGR D IE
Sbjct: 1297 IDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIE 1356
Query: 1299 GVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYG-KEPIMS 1418
GVSECIIMGIPM LGTGILK+RQR P L YG +PIMS
Sbjct: 1357 GVSECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDPIMS 1397
Score = 146 bits (369), Expect(2) = 5e-87
Identities = 83/166 (50%), Positives = 115/166 (69%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
T GVPRIKEIINGAK ISTPII A+LEC+ + +AR+VKG IEKT+LG++A+S+KIV+ S
Sbjct: 1071 TQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTS 1130
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
R A I + LDME I+ + L I+A V++ +Q+++VLD R L+
Sbjct: 1131 RLASIVIALDMETIQDAHLCINADIVKE--------SIVQTPKIKLKQQHIKVLDFRKLE 1182
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENRKRAR 930
I P D++KIHF L+SLK++LP V+V G+ TVERV+++E K R
Sbjct: 1183 I-FPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKR 1227
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
gi|937914934|dbj|BAS89853.1| Os04g0492300 [Oryza sativa
Japonica Group]
Length = 1383
Score = 208 bits (529), Expect(2) = 5e-87
Identities = 105/159 (66%), Positives = 122/159 (76%)
Frame = +3
Query: 942 YEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMSI 1121
Y++ VEGTNL AVMGT GVD T SNHI+EV TLG Q+ MK + M+I
Sbjct: 1225 YKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNI 1284
Query: 1122 DVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIEG 1301
D RHMMLLAD+MT KGE+LGITR+GI KMK SVLMLASFEKT +HLFN S +GR D IEG
Sbjct: 1285 DSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEG 1344
Query: 1302 VSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
VSECIIMGIPMQLGTGILKVRQR++HLP+ Y +PI++
Sbjct: 1345 VSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQPDPILA 1383
Score = 143 bits (360), Expect(2) = 5e-87
Identities = 81/160 (50%), Positives = 106/160 (66%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIIN AK ISTPII A+L ++DV SAR+VKGS+EK VLGE+AE++KIVL+S
Sbjct: 1065 TLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKS 1124
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
+ VKLDM+ I + ISA SVQ ++V V+D L+
Sbjct: 1125 SQPNLVVKLDMQRIEALHMGISADSVQ--------LSILNHPKIKLKSEHVRVIDKSKLR 1176
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSE 912
I D++K+ + LH LKSMLP+V+V G+PTVER ++SE
Sbjct: 1177 IYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVISE 1216
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 208 bits (529), Expect(2) = 5e-87
Identities = 105/159 (66%), Positives = 122/159 (76%)
Frame = +3
Query: 942 YEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMSI 1121
Y++ VEGTNL AVMGT GVD T SNHI+EV TLG Q+ MK + M+I
Sbjct: 1163 YKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNI 1222
Query: 1122 DVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIEG 1301
D RHMMLLAD+MT KGE+LGITR+GI KMK SVLMLASFEKT +HLFN S +GR D IEG
Sbjct: 1223 DSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEG 1282
Query: 1302 VSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
VSECIIMGIPMQLGTGILKVRQR++HLP+ Y +PI++
Sbjct: 1283 VSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQPDPILA 1321
Score = 143 bits (360), Expect(2) = 5e-87
Identities = 81/160 (50%), Positives = 106/160 (66%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIIN AK ISTPII A+L ++DV SAR+VKGS+EK VLGE+AE++KIVL+S
Sbjct: 1003 TLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKS 1062
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
+ VKLDM+ I + ISA SVQ ++V V+D L+
Sbjct: 1063 SQPNLVVKLDMQRIEALHMGISADSVQ--------LSILNHPKIKLKSEHVRVIDKSKLR 1114
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSE 912
I D++K+ + LH LKSMLP+V+V G+PTVER ++SE
Sbjct: 1115 IYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERAVISE 1154
>gb|KDO73040.1| hypothetical protein CISIN_1g000828mg [Citrus sinensis]
gi|641854233|gb|KDO73041.1| hypothetical protein
CISIN_1g000828mg [Citrus sinensis]
Length = 1265
Score = 204 bits (520), Expect(2) = 5e-87
Identities = 108/161 (67%), Positives = 120/161 (74%), Gaps = 1/161 (0%)
Frame = +3
Query: 939 EYEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMS 1118
+Y + VEGT L+AVMG G+DGC T SNHI EVQ+TLG MK + MS
Sbjct: 1105 KYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMS 1164
Query: 1119 IDVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIE 1298
ID RHMMLLAD+MT +GEVLGITRFGIQKM +SVLMLASFEKT DHLFN S+NGR D IE
Sbjct: 1165 IDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIE 1224
Query: 1299 GVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYG-KEPIMS 1418
GVSECIIMGIPM LGTGILK+RQR P L YG +PIMS
Sbjct: 1225 GVSECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDPIMS 1265
Score = 146 bits (369), Expect(2) = 5e-87
Identities = 83/166 (50%), Positives = 115/166 (69%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
T GVPRIKEIINGAK ISTPII A+LEC+ + +AR+VKG IEKT+LG++A+S+KIV+ S
Sbjct: 939 TQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTS 998
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
R A I + LDME I+ + L I+A V++ +Q+++VLD R L+
Sbjct: 999 RLASIVIALDMETIQDAHLCINADIVKE--------SIVQTPKIKLKQQHIKVLDFRKLE 1050
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENRKRAR 930
I P D++KIHF L+SLK++LP V+V G+ TVERV+++E K R
Sbjct: 1051 I-FPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKR 1095
>ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
[Gossypium raimondii] gi|763752836|gb|KJB20224.1|
hypothetical protein B456_003G139100 [Gossypium
raimondii]
Length = 1398
Score = 199 bits (506), Expect(2) = 1e-86
Identities = 100/159 (62%), Positives = 119/159 (74%)
Frame = +3
Query: 942 YEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMSI 1121
Y++FVEG L+ VMG G+DG T SNH++E+ + LG M + MSI
Sbjct: 1240 YQLFVEGMGLQTVMGVEGIDGRKTMSNHVMEMLQILGIEAARSCIINEIAATMASHGMSI 1299
Query: 1122 DVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIEG 1301
D+RHMMLL DVMT +GEVLGITRFGIQKM +S+LMLASFEKT DHLFN S+NGR D IEG
Sbjct: 1300 DIRHMMLLGDVMTFRGEVLGITRFGIQKMDKSILMLASFEKTGDHLFNASVNGRDDKIEG 1359
Query: 1302 VSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
V+ECIIMGIPMQLGTGILKV QRV+ LP L YG +P++S
Sbjct: 1360 VTECIIMGIPMQLGTGILKVMQRVDPLPLLQYGADPVLS 1398
Score = 150 bits (380), Expect(2) = 1e-86
Identities = 86/163 (52%), Positives = 113/163 (69%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
T GVPRIKEIIN AK ISTPII A+LE D +V ARMVKG IEKTVLG++A+S+KIV+ S
Sbjct: 1074 TQGVPRIKEIINAAKKISTPIITAELEFDSNVNVARMVKGRIEKTVLGQVAKSIKIVMTS 1133
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
R A + + LDME I+ +QL I A V++ EQ+V+VLD + L+
Sbjct: 1134 RLASVVISLDMERIQDAQLHIDANVVKE--------SILQTPKLKLKEQHVKVLDVKKLE 1185
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENRK 921
+ P DR++IHF LHSLK++LP VVV G+ TVERV+++E +K
Sbjct: 1186 V-VPPADRSRIHFELHSLKNLLPLVVVKGIKTVERVVIAEKKK 1227
>ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
[Gossypium raimondii]
Length = 1395
Score = 199 bits (506), Expect(2) = 1e-86
Identities = 100/159 (62%), Positives = 119/159 (74%)
Frame = +3
Query: 942 YEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMSI 1121
Y++FVEG L+ VMG G+DG T SNH++E+ + LG M + MSI
Sbjct: 1237 YQLFVEGMGLQTVMGVEGIDGRKTMSNHVMEMLQILGIEAARSCIINEIAATMASHGMSI 1296
Query: 1122 DVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIEG 1301
D+RHMMLL DVMT +GEVLGITRFGIQKM +S+LMLASFEKT DHLFN S+NGR D IEG
Sbjct: 1297 DIRHMMLLGDVMTFRGEVLGITRFGIQKMDKSILMLASFEKTGDHLFNASVNGRDDKIEG 1356
Query: 1302 VSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
V+ECIIMGIPMQLGTGILKV QRV+ LP L YG +P++S
Sbjct: 1357 VTECIIMGIPMQLGTGILKVMQRVDPLPLLQYGADPVLS 1395
Score = 150 bits (380), Expect(2) = 1e-86
Identities = 86/163 (52%), Positives = 113/163 (69%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
T GVPRIKEIIN AK ISTPII A+LE D +V ARMVKG IEKTVLG++A+S+KIV+ S
Sbjct: 1071 TQGVPRIKEIINAAKKISTPIITAELEFDSNVNVARMVKGRIEKTVLGQVAKSIKIVMTS 1130
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
R A + + LDME I+ +QL I A V++ EQ+V+VLD + L+
Sbjct: 1131 RLASVVISLDMERIQDAQLHIDANVVKE--------SILQTPKLKLKEQHVKVLDVKKLE 1182
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSENRK 921
+ P DR++IHF LHSLK++LP VVV G+ TVERV+++E +K
Sbjct: 1183 V-VPPADRSRIHFELHSLKNLLPLVVVKGIKTVERVVIAEKKK 1224
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 206 bits (523), Expect(2) = 2e-85
Identities = 104/160 (65%), Positives = 121/160 (75%)
Frame = +3
Query: 939 EYEVFVEGTNLRAVMGTLGVDGCNTTSNHIIEVQETLGXXXXXXXXXXXXQHIMKEYRMS 1118
+Y + VEGTNL AVMGT GVD T SNHI+EV TLG Q+ M + M+
Sbjct: 1230 KYSLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMN 1289
Query: 1119 IDVRHMMLLADVMTSKGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLNGRVDMIE 1298
ID RHMMLLAD+MT KGE+LGITR+GI KMK SVLMLASFEKT +HLFN S +GR D IE
Sbjct: 1290 IDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIE 1349
Query: 1299 GVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGKEPIMS 1418
GVSECIIMGIPMQLGTGILKVRQR++HLP+ Y +PI++
Sbjct: 1350 GVSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQPDPILA 1389
Score = 140 bits (352), Expect(2) = 2e-85
Identities = 79/160 (49%), Positives = 105/160 (65%)
Frame = +1
Query: 433 TLGVPRIKEIINGAKNISTPIIAAKLECDRDVRSARMVKGSIEKTVLGEIAESMKIVLES 612
TLGVPRIKEIIN AK ISTPII A+L +DV SAR+VKGS+EK VLGE+AE +KIVL+S
Sbjct: 1075 TLGVPRIKEIINAAKKISTPIITAELLSGKDVLSARVVKGSMEKAVLGEVAEDIKIVLKS 1134
Query: 613 RGAYIPVKLDMELIRCSQLKISATSVQQXXXXXXXXXXXXXXXXXXXEQYVEVLDDRSLK 792
+ VKLDM+ I + ISA SVQ ++V V+D L+
Sbjct: 1135 SQPNLVVKLDMQRIEDLHMGISADSVQ--------LSILNHPRIKLKSEHVRVIDKAKLR 1186
Query: 793 IRSPEKDRTKIHFALHSLKSMLPEVVVMGVPTVERVIVSE 912
+ D++K+ + LH+LKSMLP+V+V G+PTVER ++S+
Sbjct: 1187 VYPTAIDKSKLLYELHNLKSMLPKVIVKGIPTVERAVISQ 1226