BLASTX nr result

ID: Papaver29_contig00014324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00014324
         (709 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010258199.1| PREDICTED: uncharacterized protein LOC104598...    66   2e-08
ref|XP_012448256.1| PREDICTED: uncharacterized protein LOC105771...    64   1e-07
ref|XP_012448253.1| PREDICTED: uncharacterized protein LOC105771...    64   1e-07
gb|KHG05113.1| DNA-directed RNA polymerase subunit beta [Gossypi...    64   1e-07

>ref|XP_010258199.1| PREDICTED: uncharacterized protein LOC104598027 [Nelumbo nucifera]
          Length = 1077

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
 Frame = -2

Query: 543  VIIDGEAKNENRPLGLPWLRGKLTCENGPTLGKGHPNITGLSS---SNQATIKAVEAVXX 373
            VIIDGE K+E+    LPWLRGK  C +     +G+    GL     ++Q     VEA   
Sbjct: 595  VIIDGERKHEDPSAVLPWLRGKPACNDMTPKARGNSERMGLDFLQVNHQHFSDKVEA--- 651

Query: 372  XXXXXXXXXXXXXXXXXXXSLRGGDGQDIRNILGVPMFDKSHSSKYQNVFA-SPAKCQ-F 199
                               S++  D    + ILGVP+F+K  +S   + F  SPA+   +
Sbjct: 652  ----GNGPSLHYVHDTEPKSVKVADRLGDKKILGVPIFEKPCASNNHSSFQLSPARINHY 707

Query: 198  PPKVEETQNSGKVL---FDINLXXXXXXXXXXXXSHNL---KGLDMNRSGYRNDFNLNLS 37
            P +VE+ +N+GK      D++             + NL   KG +   +  RN  NLN  
Sbjct: 708  PSRVEDVENNGKATVLHIDLSCDPILPNLGDHFATQNLMVEKGSNNTLAASRNHINLNSC 767

Query: 36   LDEEENSAVPY 4
             DE+++S+V Y
Sbjct: 768  ADEDDSSSVVY 778


>ref|XP_012448256.1| PREDICTED: uncharacterized protein LOC105771361 isoform X2 [Gossypium
            raimondii]
          Length = 982

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
 Frame = -2

Query: 558  IRQHPVIIDGEAKNENRPLGLPWLRGKLTCEN-----GPTLGKGHPNITGLSSSNQATIK 394
            + QH   IDG  K+E+ P GLPWLR K  C+N     G  L  G  + T  SS +Q+TIK
Sbjct: 488  VLQHGYQIDGGRKHEDHPPGLPWLRAKPACKNESPIAGMDLNVGELSFT-QSSPDQSTIK 546

Query: 393  AVEAVXXXXXXXXXXXXXXXXXXXXXSLRGGDGQDIRN--ILGVPMFDKSHSSKYQNVFA 220
              E+                      + R    + + N  ILG+P+F++ + SK ++ F 
Sbjct: 547  N-ESGNGFNQILIQDMKSVPFSNNIGASRSEINECLHNKKILGIPIFERCYISKNESSFT 605

Query: 219  SPAKCQFPPKVEETQNSGK-VLFDINL--XXXXXXXXXXXXSHNL---KGLDMNRSGYRN 58
            SP      P   E +N G+  L DINL              + N    K ++   S +R 
Sbjct: 606  SPHVSVSQPAEGEAENKGRNRLLDINLPCDATIPDVGQDTVAENSVIEKKVNTKFSSFRP 665

Query: 57   DFNLNLSLDEEENSAVPYI 1
            + +LN  +DE + S +P +
Sbjct: 666  EIDLNSCVDENDASFIPSV 684


>ref|XP_012448253.1| PREDICTED: uncharacterized protein LOC105771361 isoform X1 [Gossypium
            raimondii] gi|823231086|ref|XP_012448254.1| PREDICTED:
            uncharacterized protein LOC105771361 isoform X1
            [Gossypium raimondii] gi|823231088|ref|XP_012448255.1|
            PREDICTED: uncharacterized protein LOC105771361 isoform
            X1 [Gossypium raimondii] gi|763793793|gb|KJB60789.1|
            hypothetical protein B456_009G325900 [Gossypium
            raimondii] gi|763793794|gb|KJB60790.1| hypothetical
            protein B456_009G325900 [Gossypium raimondii]
            gi|763793795|gb|KJB60791.1| hypothetical protein
            B456_009G325900 [Gossypium raimondii]
            gi|763793796|gb|KJB60792.1| hypothetical protein
            B456_009G325900 [Gossypium raimondii]
          Length = 1074

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
 Frame = -2

Query: 558  IRQHPVIIDGEAKNENRPLGLPWLRGKLTCEN-----GPTLGKGHPNITGLSSSNQATIK 394
            + QH   IDG  K+E+ P GLPWLR K  C+N     G  L  G  + T  SS +Q+TIK
Sbjct: 580  VLQHGYQIDGGRKHEDHPPGLPWLRAKPACKNESPIAGMDLNVGELSFT-QSSPDQSTIK 638

Query: 393  AVEAVXXXXXXXXXXXXXXXXXXXXXSLRGGDGQDIRN--ILGVPMFDKSHSSKYQNVFA 220
              E+                      + R    + + N  ILG+P+F++ + SK ++ F 
Sbjct: 639  N-ESGNGFNQILIQDMKSVPFSNNIGASRSEINECLHNKKILGIPIFERCYISKNESSFT 697

Query: 219  SPAKCQFPPKVEETQNSGK-VLFDINL--XXXXXXXXXXXXSHNL---KGLDMNRSGYRN 58
            SP      P   E +N G+  L DINL              + N    K ++   S +R 
Sbjct: 698  SPHVSVSQPAEGEAENKGRNRLLDINLPCDATIPDVGQDTVAENSVIEKKVNTKFSSFRP 757

Query: 57   DFNLNLSLDEEENSAVPYI 1
            + +LN  +DE + S +P +
Sbjct: 758  EIDLNSCVDENDASFIPSV 776


>gb|KHG05113.1| DNA-directed RNA polymerase subunit beta [Gossypium arboreum]
          Length = 1073

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 13/197 (6%)
 Frame = -2

Query: 552  QHPVIIDGEAKNENRPLGLPWLRGKLTCEN-----GPTLGKGHPNITGLSSSNQATIKAV 388
            QH   IDG  K+E+ P GLPWLR K  C+N     G  L  G  + T  SS  Q+TIK  
Sbjct: 581  QHGYQIDGGRKHEDHPPGLPWLRAKPACKNDAPNAGMDLNVGELSFT-QSSPKQSTIKN- 638

Query: 387  EAVXXXXXXXXXXXXXXXXXXXXXSLRGGDGQDIRN--ILGVPMFDKSHSSKYQNVFASP 214
            E                       + R    + + N  ILG+P+F++ + SK ++ F SP
Sbjct: 639  ETGNGFNQILIQDMKSVPFSNNIGASRSEINECLHNKKILGIPIFERCYISKNESSFTSP 698

Query: 213  AKCQFPPKVEETQNSGK-VLFDINL---XXXXXXXXXXXXSHNLKGLDMNR--SGYRNDF 52
                  P   E +N G+  L DINL                +++   D+N   S +R + 
Sbjct: 699  HVSVSQPAEGEAENKGRNRLLDINLPCDATIPDVGQDTVAENSVIEKDVNTKLSSFRPEI 758

Query: 51   NLNLSLDEEENSAVPYI 1
            +LN  +DE + S +P +
Sbjct: 759  DLNSCVDENDVSFIPSV 775


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