BLASTX nr result

ID: Papaver29_contig00011314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00011314
         (501 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297705.1| hypothetical protein POPTR_0001s07280g [Popu...    57   5e-06
ref|XP_006368650.1| hypothetical protein POPTR_0001s07280g [Popu...    57   5e-06
ref|XP_011034645.1| PREDICTED: F-box protein CPR30-like isoform ...    56   9e-06
ref|XP_011034644.1| PREDICTED: F-box protein CPR30-like isoform ...    56   9e-06

>ref|XP_002297705.1| hypothetical protein POPTR_0001s07280g [Populus trichocarpa]
           gi|566147699|ref|XP_006368651.1| S haplotype-specific
           F-box protein 1 [Populus trichocarpa]
           gi|222844963|gb|EEE82510.1| hypothetical protein
           POPTR_0001s07280g [Populus trichocarpa]
           gi|550346725|gb|ERP65220.1| S haplotype-specific F-box
           protein 1 [Populus trichocarpa]
          Length = 408

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 6/171 (3%)
 Frame = +2

Query: 2   YNASTREATPWVISTLLAEENDKLMENESTTKIKSHSIPSYRFGFDPEKSEHKVFCFWRL 181
           YN STRE     +S L      +L  +   +K+ S     Y FG DP   ++KV  F   
Sbjct: 113 YNPSTREKKMIPVSPL------ELPNDLDDSKVSS-LFNFYGFGHDPINEDYKVVRFI-- 163

Query: 182 VARSEQHRYNSLEQPD-YESWEVLTVG-RDTKWRRINVVPNENNQIRIKEVLPP-VHSSC 352
                 H Y   + PD +   EV     +   W+RI+  P +     ++ +LPP  H  C
Sbjct: 164 ------HFYG--DSPDGFFHCEVKVYSLKSNSWKRIDDYPYD-----LRFILPPDYHPRC 210

Query: 353 RQ---VYADGTIYWSNKEYYSDEWGKTNPNDPDVIVAFDVGSEKYRLIPIP 496
           R+   V+A+  ++W      +   GK   N  D+IVAFD+G+E++++IP P
Sbjct: 211 RRGYGVFANSAVHWK-----ATVVGKGKENGSDLIVAFDLGAEEFKIIPQP 256


>ref|XP_006368650.1| hypothetical protein POPTR_0001s07280g [Populus trichocarpa]
           gi|550346724|gb|ERP65219.1| hypothetical protein
           POPTR_0001s07280g [Populus trichocarpa]
          Length = 420

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 6/171 (3%)
 Frame = +2

Query: 2   YNASTREATPWVISTLLAEENDKLMENESTTKIKSHSIPSYRFGFDPEKSEHKVFCFWRL 181
           YN STRE     +S L      +L  +   +K+ S     Y FG DP   ++KV  F   
Sbjct: 113 YNPSTREKKMIPVSPL------ELPNDLDDSKVSS-LFNFYGFGHDPINEDYKVVRFI-- 163

Query: 182 VARSEQHRYNSLEQPD-YESWEVLTVG-RDTKWRRINVVPNENNQIRIKEVLPP-VHSSC 352
                 H Y   + PD +   EV     +   W+RI+  P +     ++ +LPP  H  C
Sbjct: 164 ------HFYG--DSPDGFFHCEVKVYSLKSNSWKRIDDYPYD-----LRFILPPDYHPRC 210

Query: 353 RQ---VYADGTIYWSNKEYYSDEWGKTNPNDPDVIVAFDVGSEKYRLIPIP 496
           R+   V+A+  ++W      +   GK   N  D+IVAFD+G+E++++IP P
Sbjct: 211 RRGYGVFANSAVHWK-----ATVVGKGKENGSDLIVAFDLGAEEFKIIPQP 256


>ref|XP_011034645.1| PREDICTED: F-box protein CPR30-like isoform X2 [Populus euphratica]
           gi|743874359|ref|XP_011034646.1| PREDICTED: F-box
           protein CPR30-like isoform X2 [Populus euphratica]
          Length = 412

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 6/171 (3%)
 Frame = +2

Query: 2   YNASTREATPWVISTLLAEENDKLMENESTTKIKSHSIPSYRFGFDPEKSEHKVFCFWRL 181
           YN STRE     +S L      +L  +   +K+ S     Y FG DP   ++KV  F   
Sbjct: 117 YNPSTREKKMIPVSPL------ELPNDLDDSKVSS-LFNFYGFGHDPVNEDYKVVRFI-- 167

Query: 182 VARSEQHRYNSLEQPD-YESWEVLTVG-RDTKWRRINVVPNENNQIRIKEVLPP-VHSSC 352
                 H Y   + PD +   EV     +   W+RI+  P +     ++ +LPP  H  C
Sbjct: 168 ------HFYG--DSPDGFFHCEVKVYSLKSNSWKRIDDYPYD-----LRFILPPDYHPRC 214

Query: 353 RQ---VYADGTIYWSNKEYYSDEWGKTNPNDPDVIVAFDVGSEKYRLIPIP 496
           R+   V+A+  ++W      +   GK   N  D+I+AFD+G+E++++IP P
Sbjct: 215 RRGYGVFANSAVHWK-----ATVVGKGKENGSDLILAFDLGAEEFKIIPQP 260


>ref|XP_011034644.1| PREDICTED: F-box protein CPR30-like isoform X1 [Populus euphratica]
          Length = 448

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 6/171 (3%)
 Frame = +2

Query: 2   YNASTREATPWVISTLLAEENDKLMENESTTKIKSHSIPSYRFGFDPEKSEHKVFCFWRL 181
           YN STRE     +S L      +L  +   +K+ S     Y FG DP   ++KV  F   
Sbjct: 117 YNPSTREKKMIPVSPL------ELPNDLDDSKVSS-LFNFYGFGHDPVNEDYKVVRFI-- 167

Query: 182 VARSEQHRYNSLEQPD-YESWEVLTVG-RDTKWRRINVVPNENNQIRIKEVLPP-VHSSC 352
                 H Y   + PD +   EV     +   W+RI+  P +     ++ +LPP  H  C
Sbjct: 168 ------HFYG--DSPDGFFHCEVKVYSLKSNSWKRIDDYPYD-----LRFILPPDYHPRC 214

Query: 353 RQ---VYADGTIYWSNKEYYSDEWGKTNPNDPDVIVAFDVGSEKYRLIPIP 496
           R+   V+A+  ++W      +   GK   N  D+I+AFD+G+E++++IP P
Sbjct: 215 RRGYGVFANSAVHWK-----ATVVGKGKENGSDLILAFDLGAEEFKIIPQP 260


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