BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00011272
         (3982 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007044250.1| DNA/RNA polymerases superfamily protein [The...   724   0.0  
ref|XP_007213082.1| hypothetical protein PRUPE_ppa021229mg [Prun...   721   0.0  
ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prun...   707   0.0  
gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   683   0.0  
emb|CAH66139.1| H0616A11.3 [Oryza sativa Indica Group]                678   0.0  
gb|ABC94893.1| polyprotein [Oryza australiensis]                      673   0.0  
ref|XP_007224141.1| hypothetical protein PRUPE_ppa016115mg [Prun...   670   0.0  
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]   669   0.0  
gb|AAV31274.1| putative polyprotein [Oryza sativa Japonica Group...   667   0.0  
dbj|BAH79971.1| hypothetical protein [Oryza sativa Indica Group]      666   0.0  
gb|ABA95022.1| retrotransposon protein, putative, Ty3-gypsy subc...   665   0.0  
gb|ABA98266.1| retrotransposon protein, putative, Ty3-gypsy subc...   665   0.0  
gb|AAS98511.1| putative polyprotein [Oryza sativa Japonica Group]     665   0.0  
gb|AAN09852.1| putative polyprotein [Oryza sativa Japonica Group]     664   0.0  
gb|ABG65971.1| retrotransposon protein, putative, Ty3-gypsy subc...   664   0.0  
gb|ABA96087.1| retrotransposon protein, putative, Ty3-gypsy subc...   664   0.0  
gb|AAX96433.1| retrotransposon protein, putative, Ty3-gypsy sub-...   664   0.0  
gb|AAM93458.1| putative polyprotein [Oryza sativa Japonica Group...   664   0.0  
gb|AAQ56454.1| putative polyprotein [Oryza sativa Japonica Group...   664   0.0  
emb|CAD40208.2| OSJNBa0019J05.6 [Oryza sativa Japonica Group]         664   0.0  

>ref|XP_007044250.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
            gi|508708185|gb|EOY00082.1| DNA/RNA polymerases
            superfamily protein [Theobroma cacao]
          Length = 1515

 Score =  724 bits (1868), Expect(3) = 0.0
 Identities = 357/554 (64%), Positives = 431/554 (77%), Gaps = 2/554 (0%)
 Frame = -2

Query: 3309 RSCIVRVGDQELSGDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFCFD 3130
            R C VRVG++E  GDLI L +  FD+ILGMDW   +RA VDC+RK I   +  G    F 
Sbjct: 439  RDCGVRVGEEEFRGDLIPLEILDFDLILGMDWLTAHRANVDCFRKEIVLRNSEGAEIVFV 498

Query: 3129 AVRYSPDILSSIILCGRQSKLCRN--LSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDD 2956
              R    + S +I   + SKL +    ++L+++   SK     +E++ IV ++ DVFPDD
Sbjct: 499  GKRRV--LPSCVISAIKASKLVQKGYSTYLAYVIDTSKGEP-KLEDVSIVSEFPDVFPDD 555

Query: 2955 LPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGA 2776
            LP +PP RE+EF IDLLPGT PIS+ PYRMA  ELKEL  QL EL +KGF + S SPWGA
Sbjct: 556  LPGLPPDRELEFPIDLLPGTAPISIPPYRMAPTELKELKVQLQELVDKGFIRPSISPWGA 615

Query: 2775 PVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQL 2596
            P+LFVKKKDG+L LCID R+LN +T+KN+YPLPRID LFDQL+GA  FSK+DLRSGYHQL
Sbjct: 616  PILFVKKKDGTLRLCIDCRQLNRMTIKNKYPLPRIDDLFDQLQGATVFSKVDLRSGYHQL 675

Query: 2595 LIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLI 2416
             I+ +D+PKTAFRTRYGH+EF VMPFGLTNAPA+FMDLM+RVF P LDKF++VFIDD+L+
Sbjct: 676  RIKEQDVPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFHPYLDKFVIVFIDDILV 735

Query: 2415 YSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAV 2236
            YS+   EHA HLRI ++TLR  QLYAKFSKCEFW+ EV FLGH+V++ GI VDP K+EA+
Sbjct: 736  YSRDNDEHAAHLRIVLQTLRERQLYAKFSKCEFWLQEVVFLGHIVSRTGIYVDPKKVEAI 795

Query: 2235 LKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLK 2056
            L+WE+PK V EIRSFLGLA Y RRFV+GFS +AAPLT+LTRKGVKFVW   CE  FQ LK
Sbjct: 796  LQWEQPKTVTEIRSFLGLAGYYRRFVQGFSLVAAPLTRLTRKGVKFVWDDVCENRFQELK 855

Query: 2055 EKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLE 1876
             +LTSAPVL  P +G G++++SD S  GLGCVLMQ  +VV YASRQLK HE NYPTHDLE
Sbjct: 856  NRLTSAPVLTLPVNGKGFIVYSDASKLGLGCVLMQDEKVVAYASRQLKRHEANYPTHDLE 915

Query: 1875 LAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHP 1696
            LAA+VFALKIWRHYLY E   IF+DHKSL+Y+ TQ++LNLRQ RW+E IKDY+  + YH 
Sbjct: 916  LAAVVFALKIWRHYLYGEHCRIFTDHKSLKYLLTQKELNLRQRRWLELIKDYDLVIDYHL 975

Query: 1695 GKANVVADALSRKS 1654
            GKANVVADALSRKS
Sbjct: 976  GKANVVADALSRKS 989



 Score =  286 bits (732), Expect(3) = 0.0
 Identities = 143/287 (49%), Positives = 189/287 (65%), Gaps = 2/287 (0%)
 Frame = -1

Query: 1555 NIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVP--SVL 1382
            N +V+P L+ +I + Q++ D+L +  +K  DG G        D  L +  R+ VP  + L
Sbjct: 1025 NFIVRPSLLNQIKDIQRSDDELRKEIQKLTDG-GVSEFRFGEDNVLMFKDRVCVPEGNQL 1083

Query: 1381 KRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPS 1202
            ++ +M+EAH S Y++HPG +KMY+ +R  +WW GMK+D+AE++++CL CQQV  EH+   
Sbjct: 1084 RQAIMEEAHSSAYALHPGSTKMYRTIRENYWWPGMKRDVAEFIAKCLVCQQVKAEHQRLV 1143

Query: 1201 GLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLS 1022
              LQ L V EWKWEH+TM F+ GLPRT  G D +W IVDRLTKSAHFL +  T ++  L+
Sbjct: 1144 DTLQSLPVPEWKWEHVTMDFILGLPRTQRGKDAIWVIVDRLTKSAHFLAVHSTYSIEKLA 1203

Query: 1021 QLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQ 842
            QLY+ EIVRLHGV +SIVSDRDPRFTS FW  FQ+A+ T L FSTAFHPQTDG+SER IQ
Sbjct: 1204 QLYIDEIVRLHGVSVSIVSDRDPRFTSRFWPKFQEALGTKLKFSTAFHPQTDGQSERTIQ 1263

Query: 841  ILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
             LED+                          +Q+SIGMAP+ ALYGR
Sbjct: 1264 TLEDI--------------------------FQSSIGMAPYEALYGR 1284



 Score =  193 bits (491), Expect(3) = 0.0
 Identities = 86/171 (50%), Positives = 123/171 (71%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+CWDEVGE  L+  E +  T +KI++I++RL  +Q RQKSYAD +R  L F + + 
Sbjct: 1286 CRTPLCWDEVGERKLVSVELIELTNDKIKVIRERLKVAQDRQKSYADKRRKGLEFEIDDK 1345

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            +FL+V P KG++RF  +G L PRYIGPFRII+R+G V+Y LELP ++ ++HNVFH+S+L+
Sbjct: 1346 VFLKVYPWKGMIRFAKRGKLNPRYIGPFRIIERIGPVAYRLELPPELDRIHNVFHVSMLK 1405

Query: 338  LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLWK 186
             Y PD SH+++   IE+ D   +E  P+ ILD K+ VLR K+   VK LWK
Sbjct: 1406 KYVPDPSHVLEAPPIELHDDLKFEVQPVSILDRKDLVLRNKSISMVKVLWK 1456


>ref|XP_007213082.1| hypothetical protein PRUPE_ppa021229mg [Prunus persica]
            gi|462408947|gb|EMJ14281.1| hypothetical protein
            PRUPE_ppa021229mg [Prunus persica]
          Length = 1194

 Score =  721 bits (1860), Expect(3) = 0.0
 Identities = 353/549 (64%), Positives = 436/549 (79%), Gaps = 3/549 (0%)
 Frame = -2

Query: 3291 VGDQELSGDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITF--LSEYGVSFCFDAVRY 3118
            VG+  L  DLI LGM   DVILGMDW A++RA VDC+RK + F  L +  V+F +   R 
Sbjct: 133  VGNVFLEADLIPLGMVDLDVILGMDWLARHRASVDCFRKEVVFHSLGQPEVTF-YGERRV 191

Query: 3117 SPDILSSIILCGRQ-SKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDDLPDIP 2941
             P  L S +   R   K C    +++H+  D++ +G+ +E+IP+++D+ DVFP+DLP +P
Sbjct: 192  LPSCLISAMTAKRLLRKGCSG--YIAHV-IDTRDNGLRLEDIPVIQDFPDVFPEDLPGLP 248

Query: 2940 PKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGAPVLFV 2761
            P REIEF I+L PGT PIS  PYRMA AEL+EL  QL EL +KGF + S SPWGAPVLFV
Sbjct: 249  PHREIEFVIELAPGTNPISQAPYRMAPAELRELKTQLQELVDKGFIRPSFSPWGAPVLFV 308

Query: 2760 KKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQLLIRYE 2581
            KKKDG++ LC+DYR+LN +TV+NRYPLPRID LFDQLKGA+ FSKIDLRSGYHQL +R E
Sbjct: 309  KKKDGTMRLCVDYRQLNKITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRVREE 368

Query: 2580 DIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLIYSKTK 2401
            D+PKTAFRTRYGH+EF VMPFGLTNAPA+FMDLM+RVF   LD+F++VFIDD+L+YSK++
Sbjct: 369  DMPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFRRYLDRFVIVFIDDILVYSKSQ 428

Query: 2400 QEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAVLKWEK 2221
            + H +HL + + TLR  QLYAKFSKC+FW+  V FLGHV++ +GI VDP KIEAV+ W +
Sbjct: 429  KAHMKHLNLVLRTLRRRQLYAKFSKCQFWLDRVSFLGHVISAEGIYVDPQKIEAVVNWLR 488

Query: 2220 PKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLKEKLTS 2041
            P +V EIRSFLGLA Y RRFVEGFS++AAPLT LTRKGVKFVW  +CE SF  LK +LT+
Sbjct: 489  PTSVTEIRSFLGLAGYYRRFVEGFSTIAAPLTYLTRKGVKFVWSDKCEESFIELKTRLTT 548

Query: 2040 APVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLELAAIV 1861
            APVL  P+    +VI+SD S +GLGCVLMQHGRV+ YASRQLK HE NYP HDLELAA+V
Sbjct: 549  APVLALPDDSGNFVIYSDASQQGLGCVLMQHGRVIAYASRQLKKHELNYPVHDLELAAVV 608

Query: 1860 FALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHPGKANV 1681
            FALKIWRHYLY E  +IF+DHKSL+Y+FTQ++LNLRQ RW+E IKDY+  +++HPG+ANV
Sbjct: 609  FALKIWRHYLYGETCQIFTDHKSLKYLFTQKELNLRQRRWLELIKDYDCTIEHHPGRANV 668

Query: 1680 VADALSRKS 1654
            VADALSRKS
Sbjct: 669  VADALSRKS 677



 Score =  333 bits (855), Expect(3) = 0.0
 Identities = 166/301 (55%), Positives = 216/301 (71%), Gaps = 2/301 (0%)
 Frame = -1

Query: 1597 GLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GL 1418
            GL ++++G+ + + +  V+PVL++ I+  Q     +  +  +  +G   D   +++D  L
Sbjct: 701  GLDVDNQGALLATLH--VRPVLVERILAAQSQDPLICTLRVEVANGDRTDC-SVRNDGAL 757

Query: 1417 RYSRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRC 1244
                RL VP+   LKR++++EAH+S +++HPG +KMY  LR  +WW  MKK IAEYV RC
Sbjct: 758  MVGNRLYVPNDEALKREILEEAHESAFAMHPGSTKMYHTLREHYWWPFMKKQIAEYVRRC 817

Query: 1243 LTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAH 1064
            L CQQV  E + PSGLLQPL + EWKWE ITM FV  LP+T S  D VW IVDRLTKSAH
Sbjct: 818  LICQQVKAERQKPSGLLQPLPIPEWKWERITMDFVFKLPQTQSKHDGVWVIVDRLTKSAH 877

Query: 1063 FLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTA 884
            FLP++   +L  L+++++ EIVRLHGVP+SIVSDRDPRFTS FW    +A  T L FSTA
Sbjct: 878  FLPVRANYSLNKLAKIFIDEIVRLHGVPVSIVSDRDPRFTSRFWTKLNEAFGTQLQFSTA 937

Query: 883  FHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYG 704
            FHPQTDG+SER IQ LE MLRACAL F+G W ++LPL+EF+YNNSYQ SIGM+PF ALYG
Sbjct: 938  FHPQTDGQSERTIQTLEHMLRACALQFRGDWDEKLPLMEFAYNNSYQVSIGMSPFDALYG 997

Query: 703  R 701
            R
Sbjct: 998  R 998



 Score =  184 bits (466), Expect(3) = 0.0
 Identities = 87/175 (49%), Positives = 126/175 (72%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P  WDEVGE  L+  E V  T +++QII++RL  +Q RQKSYADN+R  L F VG+ 
Sbjct: 1000 CRTPFYWDEVGEHRLVVSEDVELTKKQVQIIRERLKTAQDRQKSYADNRRKDLQFEVGDW 1059

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            +FL+++P KGVVRFG +G L+PRYIGP+ II+ VG V+Y L LP+ + ++H+VFH+S+LR
Sbjct: 1060 VFLKLSPWKGVVRFGKRGKLSPRYIGPYEIIECVGPVAYRLTLPSDLARLHDVFHVSMLR 1119

Query: 338  LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLWKYRMV 174
             Y  D SH+++ + +E++   TY E P++ILD K QVLR++    VK LW+   V
Sbjct: 1120 KYISDPSHVLEEQPVELEADFTYVEQPVQILDWKTQVLRSREIPLVKVLWRSHTV 1174


>ref|XP_007200265.1| hypothetical protein PRUPE_ppa015000mg [Prunus persica]
            gi|462395665|gb|EMJ01464.1| hypothetical protein
            PRUPE_ppa015000mg [Prunus persica]
          Length = 1493

 Score =  707 bits (1826), Expect(3) = 0.0
 Identities = 347/556 (62%), Positives = 430/556 (77%), Gaps = 1/556 (0%)
 Frame = -2

Query: 3318 RICRSCIVRVGDQELSGDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSF 3139
            R+ R+C V+V D  L  +LI L +   D+ILGMDW  K+ A VDC+RK +T  S      
Sbjct: 422  RVFRNCFVQVDDAWLEANLIPLDLVDLDIILGMDWLEKHHASVDCFRKEVTLRSPGQPKV 481

Query: 3138 CFDAVR-YSPDILSSIILCGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFP 2962
             F   R   P  L S I   +  K      +L+H+  D++   + +E+IP+V ++ ++FP
Sbjct: 482  TFRGERRVLPTCLISAITAKKLLKKGYE-GYLAHI-IDTREITLNLEDIPVVCEFPNIFP 539

Query: 2961 DDLPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPW 2782
            DDLP +PPKREIEFTID LPGT PI  TPYRMA AEL+EL  QL EL +  F + S SPW
Sbjct: 540  DDLPGLPPKREIEFTIDFLPGTNPIYQTPYRMAPAELRELKIQLQELVDLRFIRPSVSPW 599

Query: 2781 GAPVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYH 2602
            GAPVLFV+K+DG++ LCIDYR+LN VT++NRYPLPRID LFDQLKGA++FSKIDLRSGYH
Sbjct: 600  GAPVLFVRKQDGTMRLCIDYRQLNKVTIRNRYPLPRIDDLFDQLKGAKYFSKIDLRSGYH 659

Query: 2601 QLLIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDV 2422
            QL IR EDIP TA RTRYGH+EF VMPFGLTNAPA+FMDLM+RVF P LD F++VFIDD+
Sbjct: 660  QLRIREEDIPNTALRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFRPYLDHFVIVFIDDI 719

Query: 2421 LIYSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIE 2242
            L+YS+T + H +HLR+ + TLR  QLYAKFSKC+FW+  V FLGHV++ +GI VDP K+E
Sbjct: 720  LVYSQTLEGHKKHLRVVLRTLRRKQLYAKFSKCQFWLDIVVFLGHVISAEGIYVDPQKVE 779

Query: 2241 AVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQT 2062
            A++ W +  +V EIRSFLGLA Y RRFVEGFSS+AAPLT+LTRK + F W  ECE SFQ 
Sbjct: 780  AIVNWVQSTSVTEIRSFLGLAGYYRRFVEGFSSIAAPLTRLTRKDIAFEWTEECEQSFQE 839

Query: 2061 LKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHD 1882
            LK++LT+APVL  P++   +VI+SD SL+GLGCVLMQH RV+ YASRQLK HEQNYP HD
Sbjct: 840  LKKRLTTAPVLALPDNAGNFVIYSDASLQGLGCVLMQHDRVIAYASRQLKKHEQNYPVHD 899

Query: 1881 LELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQY 1702
            LELAA+VFALKIWRHYLY E  +IF+DHKSL+Y FTQR+LN+RQ RW+E IKDY+  ++Y
Sbjct: 900  LELAAVVFALKIWRHYLYGETCQIFTDHKSLKYFFTQRELNMRQRRWLELIKDYDCTIEY 959

Query: 1701 HPGKANVVADALSRKS 1654
            +PG+ANVVADALSRK+
Sbjct: 960  YPGRANVVADALSRKT 975



 Score =  322 bits (825), Expect(3) = 0.0
 Identities = 168/302 (55%), Positives = 207/302 (68%), Gaps = 2/302 (0%)
 Frame = -1

Query: 1600 EGLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*G 1421
            +G+ LE         ++ V+P+L++ I+  Q     L  I  +   G+  D   I+ D  
Sbjct: 996  DGVELEMTQQGGILASLHVRPILVERIIVAQLGDPTLCRIRGEVESGSRKDY-AIRGDGA 1054

Query: 1420 LRYSRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSR 1247
            L    RL VP    LKR++++EAH S Y++HPG +KMY+ LR  + W  MK DIA+YVSR
Sbjct: 1055 LVTGTRLHVPKNDYLKREILEEAHCSTYTMHPGSTKMYRTLREYYSWPHMKGDIAKYVSR 1114

Query: 1246 CLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSA 1067
            CL CQQV  E + PSGL+QPL + EWKWE ITM FV  LPRT+ G D +W IVDRLTKS 
Sbjct: 1115 CLICQQVKAERQKPSGLMQPLPIPEWKWERITMDFVFKLPRTSKGHDGIWVIVDRLTKST 1174

Query: 1066 HFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFST 887
            HFLPIK+T +L  L++L+V EIVRLHG P+SIVSDRD RFTS FW   Q+AM T L FST
Sbjct: 1175 HFLPIKETYSLTKLAKLFVDEIVRLHGAPVSIVSDRDARFTSRFWKCLQEAMGTRLQFST 1234

Query: 886  AFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALY 707
            AFHPQTDG+SER IQ LEDMLR+C L  K SW   L L+EF+YNNSY ASI MAP+ ALY
Sbjct: 1235 AFHPQTDGQSERTIQTLEDMLRSCVLQMKDSWDTHLALVEFAYNNSYHASIKMAPYEALY 1294

Query: 706  GR 701
            GR
Sbjct: 1295 GR 1296



 Score =  196 bits (497), Expect(3) = 0.0
 Identities = 85/175 (48%), Positives = 135/175 (77%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+CW+EVG++ L   + ++ TTEK+++I+++L  +Q RQKSYADN+   L F VG+ 
Sbjct: 1298 CRTPICWNEVGDKKLEKVDSIQATTEKVKMIKEKLKIAQDRQKSYADNRSKDLEFAVGDW 1357

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            +FL+++P KGV+RFG +G L+PRYIGP+ I +R+G V+Y L LPA++ +VH+VFH+S+LR
Sbjct: 1358 VFLKLSPWKGVMRFGKRGKLSPRYIGPYEITERIGPVAYRLALPAELSQVHDVFHVSMLR 1417

Query: 338  LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLWKYRMV 174
             Y  D SHI++++ +EV++  +YEE P++ILD KEQ+LR++    VK LW+ + V
Sbjct: 1418 KYMSDPSHILEYQPVEVEEDLSYEEQPVQILDRKEQMLRSRFIPVVKVLWRSQTV 1472


>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  683 bits (1763), Expect(3) = 0.0
 Identities = 333/558 (59%), Positives = 414/558 (74%), Gaps = 10/558 (1%)
 Frame = -2

Query: 3297 VRVGDQELSGDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFCFDAVRY 3118
            +++G+     DLI   +++ D+ILGMDW  KY A +DC  + +      G    +  +  
Sbjct: 458  LKIGEGYFPSDLIEFNLSNLDIILGMDWLGKYMARIDCDAQKVELKDPSGKRVSYRRIPR 517

Query: 3117 SPDILSSIILCGRQSKLCRNLSFLSHMDSD----------SKSSGVTIEEIPIVRDYVDV 2968
             P I           K+   L   +++D             +   +  E++PIVR++ DV
Sbjct: 518  EPGI-----------KVINALQLKNYVDKGWPLFMCSVRRVEDDPLRPEDVPIVREFQDV 566

Query: 2967 FPDDLPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTS 2788
            FP+++P +PP+R++EFT+DL+PGT PIS   YRMA AE+ EL  QL EL +KG+ + S S
Sbjct: 567  FPEEIPGMPPRRDVEFTVDLVPGTGPISKATYRMAPAEMNELKNQLEELLDKGYIRPSMS 626

Query: 2787 PWGAPVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSG 2608
            PWGAPVLFVKKKDGSL LCIDYR+LN VTVKN+YPLPRID LFDQL+GA  FSKIDLRSG
Sbjct: 627  PWGAPVLFVKKKDGSLRLCIDYRELNNVTVKNKYPLPRIDDLFDQLQGAGMFSKIDLRSG 686

Query: 2607 YHQLLIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFID 2428
            YHQL I   DIPKTAFRTRYGH+EF VMPFGLTNAPA FMDLM+R+F P LDKF+VVFID
Sbjct: 687  YHQLRIVDHDIPKTAFRTRYGHYEFTVMPFGLTNAPAVFMDLMNRIFRPYLDKFVVVFID 746

Query: 2427 DVLIYSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVK 2248
            D+LIYSK K+EH +HLR+ ++TLR++QLYAKFSKCEFW+  V FLGH ++K+G+ VDP K
Sbjct: 747  DILIYSKNKEEHEDHLRVILQTLRDNQLYAKFSKCEFWLERVSFLGHFISKEGVLVDPAK 806

Query: 2247 IEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSF 2068
            I+AV +W  PKNV +IRSFLGLA Y RRFV+ FS +A P+T L +K  +F W  + E +F
Sbjct: 807  IKAVSEWPTPKNVTDIRSFLGLAGYYRRFVKDFSKIAKPMTNLMKKDCRFTWNEDSEKAF 866

Query: 2067 QTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPT 1888
            QTLKE+LTSAPVL  P    GY ++SD S  GLGCVLMQ+G+V+ YASRQLK +E NYPT
Sbjct: 867  QTLKERLTSAPVLTLPNGNEGYDVYSDASKNGLGCVLMQNGKVIAYASRQLKPYEVNYPT 926

Query: 1887 HDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNL 1708
            HDLELAAIVFALKIWRHYLY     IF+DHKSL+YIFTQ+DLN+RQ RW+E IKDY+ ++
Sbjct: 927  HDLELAAIVFALKIWRHYLYGVTCRIFTDHKSLKYIFTQKDLNMRQRRWLELIKDYDLDI 986

Query: 1707 QYHPGKANVVADALSRKS 1654
            QYH GKANVVADALSRKS
Sbjct: 987  QYHEGKANVVADALSRKS 1004



 Score =  317 bits (811), Expect(3) = 0.0
 Identities = 152/287 (52%), Positives = 199/287 (69%), Gaps = 3/287 (1%)
 Frame = -1

Query: 1552 IVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV---L 1382
            + ++P  ++EI  +Q     L  +  K  +G   +G  I  D  +RY  R  VP     L
Sbjct: 1041 LTIEPNFLEEIRASQPGDVKLERVKAKLKEGKA-EGFAIHEDGSIRYKGRWCVPQKCEEL 1099

Query: 1381 KRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPS 1202
            K+K+M E H + Y +HPG  K+YKDL++ FWW GMK+ +AE+VS+CLTCQ+V  EH+ P 
Sbjct: 1100 KQKIMSEGHNTTYYVHPGGDKLYKDLKKMFWWPGMKRAVAEFVSKCLTCQKVKSEHKRPQ 1159

Query: 1201 GLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLS 1022
            G +QPL +  WKW+ I+M FV  LPR+  G +T+W IVDRLTK+A F+P+K T ++  L+
Sbjct: 1160 GKIQPLDIPTWKWDSISMDFVVALPRSRGGNNTIWVIVDRLTKTARFIPMKDTWSMEALA 1219

Query: 1021 QLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQ 842
            + YVK ++RLHGVP SIVSD+D RF S FW   Q+A  + L  STAFHP TDG++ER IQ
Sbjct: 1220 KAYVKNVIRLHGVPTSIVSDQDSRFLSNFWKKVQEAFGSELLMSTAFHPATDGQTERTIQ 1279

Query: 841  ILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
             LEDMLRACAL+++GSW D L LIEFSYNNSY ASI MAPF ALYGR
Sbjct: 1280 TLEDMLRACALEYQGSWEDHLDLIEFSYNNSYHASIKMAPFEALYGR 1326



 Score =  194 bits (492), Expect(3) = 0.0
 Identities = 82/171 (47%), Positives = 128/171 (74%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C+SP+CW+++ E  +LGP+ ++ET +++++IQ+++  +Q RQKSYAD KR   +F VGE 
Sbjct: 1328 CRSPLCWNDISETVVLGPDMIQETMDQVRVIQEKIKTAQDRQKSYADQKRRDENFEVGEK 1387

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            + L+V+P KGV+RFG KG L+P++IGP+ I+ RVG+V+Y L+LP  + +VHNVFH+S LR
Sbjct: 1388 VLLKVSPMKGVMRFGKKGKLSPKFIGPYEILARVGKVAYRLDLPNDLERVHNVFHVSQLR 1447

Query: 338  LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLWK 186
             Y PD SH+++ + +E+ +  +YEE P++ILD K +  R K  R VK LW+
Sbjct: 1448 RYVPDASHVLEPENVEIDETLSYEEKPVQILDRKVRSTRNKDVRIVKVLWR 1498


>emb|CAH66139.1| H0616A11.3 [Oryza sativa Indica Group]
          Length = 1451

 Score =  678 bits (1750), Expect(4) = 0.0
 Identities = 335/584 (57%), Positives = 422/584 (72%)
 Frame = -2

Query: 3405 SGCSKFGFAL*TIRKTVHVIKPVASVSLGRICRSCIVRVGDQELSGDLIVLGMTSFDVIL 3226
            S  SK G  + ++ + + V  P   V   R C S  + + +      LI+L     DVIL
Sbjct: 399  SFASKHGMEVVSLGRPLLVNTPGNQVFSTRYCPSVTIEIEEVPFPSSLILLESKDLDVIL 458

Query: 3225 GMDWFAKYRALVDCYRKGITFLSEYGVSFCFDAVRYSPDILSSIILCGRQSKLCRNLSFL 3046
            GMDW +++R ++DC  + +T  +  G +  F A   SP  L  ++               
Sbjct: 459  GMDWLSRHRGVIDCANRKVTLTNSNGETVSFFAS--SPKSLGGVL--------------- 501

Query: 3045 SHMDSDSKSSGVTIEEIPIVRDYVDVFPDDLPDIPPKREIEFTIDLLPGTTPISVTPYRM 2866
                     + V ++EIPIV+DY DVFP+DLP +PPKR+IEF IDL+PGT PI   PYRM
Sbjct: 502  ---------NQVALQEIPIVQDYPDVFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRM 552

Query: 2865 ASAELKELDKQLSELQEKGFTQTSTSPWGAPVLFVKKKDGSLLLCIDYRKLNVVTVKNRY 2686
            A+ EL E+ KQ+ +L +KG+ + STSPWGAPV+FV+KKD +  +C+DYR LN VT+KN+Y
Sbjct: 553  AANELAEVKKQVDDLLQKGYIRPSTSPWGAPVIFVEKKDHTQRMCVDYRALNEVTIKNKY 612

Query: 2685 PLPRIDYLFDQLKGAQFFSKIDLRSGYHQLLIRYEDIPKTAFRTRYGHFEFHVMPFGLTN 2506
            PLPRID LFDQL+GA  FSKIDLRSGYHQL IR EDIPKTAF TRYG FE  VM FGLTN
Sbjct: 613  PLPRIDDLFDQLEGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTN 672

Query: 2505 APASFMDLMHRVF*PLLDKFIVVFIDDVLIYSKTKQEHAEHLRITMETLRNHQLYAKFSK 2326
            APA FM+LM++VF   LDKF+VVFIDD+LIYSKTK+EH EHLR+ +E LR HQLYAKFSK
Sbjct: 673  APAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSK 732

Query: 2325 CEFWIHEVQFLGHVVTKDGICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFS 2146
            CEFW+ EV+FLGHV++  G+  DP  +E+VL W++PK V E+RSFLGLA Y RRF+E FS
Sbjct: 733  CEFWLSEVKFLGHVISSGGVAEDPSNVESVLSWKQPKTVSEVRSFLGLAGYYRRFIENFS 792

Query: 2145 SLAAPLTKLTRKGVKFVWGTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLG 1966
             +A P+T+L +K VK+ W  +CE SFQ LK++L +APVL+ P+S  G+ ++ D S  GLG
Sbjct: 793  KIARPMTRLLQKEVKYKWTEDCEQSFQELKKRLVTAPVLILPDSRKGFQVYCDASRLGLG 852

Query: 1965 CVLMQHGRVVDYASRQLKSHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLR 1786
            CVLMQ G+VV YASRQL+ HE NYPTHDLELAA+V ALKIWRHYLY  + EI++DHKSL+
Sbjct: 853  CVLMQEGKVVAYASRQLRPHENNYPTHDLELAAVVHALKIWRHYLYGNRTEIYTDHKSLK 912

Query: 1785 YIFTQRDLNLRQLRWMEFIKDYEFNLQYHPGKANVVADALSRKS 1654
            YIFTQ DLN+RQ RW+E IKDY+  + YHPGKANVVADALSRKS
Sbjct: 913  YIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRKS 956



 Score =  312 bits (799), Expect(4) = 0.0
 Identities = 159/310 (51%), Positives = 210/310 (67%), Gaps = 3/310 (0%)
 Frame = -1

Query: 1621 WKLYEAVEGLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG* 1442
            W+L +  E L+L    S+     +  +P L  +I E Q N  D+ EI +    G      
Sbjct: 968  WELCQEFEKLNLGIV-SKGFVATLEAKPTLFDQIREAQVNDPDIQEIKKNMRRGKAIG-- 1024

Query: 1441 EIQSD*GLRY-SRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKK 1271
             ++ + G  +   R+ VP    LK  +M EAH++ YSIHPG +KMY+DL++QFWW+ M++
Sbjct: 1025 YVEDEQGTVWLGERICVPENKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRR 1084

Query: 1270 DIAEYVSRCLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAI 1091
            +IAEYV+ C  CQ+V  EH+  +GLLQPL + EWKWE I M F++GLPRT++G D++W +
Sbjct: 1085 EIAEYVALCDVCQRVKAEHQKSAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVV 1144

Query: 1090 VDRLTKSAHFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAM 911
            VDRLTK AHF+P+K T T   L++LY+  +V LHGVP  IVSDR  +FTS FW   Q  +
Sbjct: 1145 VDRLTKVAHFIPVKTTYTGHKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQSEL 1204

Query: 910  STTLSFSTAFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIG 731
             T L+FSTA+HPQTDG++ERV QILEDMLRAC LDF GSW   LP  EFSYNNSYQAS+ 
Sbjct: 1205 GTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQ 1264

Query: 730  MAPF*ALYGR 701
            M+P  ALYGR
Sbjct: 1265 MSPNEALYGR 1274



 Score =  123 bits (308), Expect(4) = 0.0
 Identities = 67/170 (39%), Positives = 96/170 (56%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ WD+ GE  + G + +RE  EK++IIQ+RL  +QSRQKSYADN+R  L+F  G+ 
Sbjct: 1276 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRQKSYADNRRRDLAFEEGDY 1335

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++LRV P +GV  F +KG LAPR++GPF+I          L +P +              
Sbjct: 1336 VYLRVTPLRGVHHFQTKGKLAPRFVGPFKIKC--------LRVPTEEAN----------- 1376

Query: 338  LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 189
               PD         IE+Q+  TY E P+RIL+  E+  R +  RF K  W
Sbjct: 1377 ---PD--------CIELQEDLTYVEKPVRILEVSERKTRNRVVRFCKVQW 1415



 Score = 39.7 bits (91), Expect(4) = 0.0
 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
 Frame = -3

Query: 3680 CYECNKPGHLRRNCPLFNGQRFQHGNRSNNAQHXXXXXXXXXXXXXXQGKVFATVETTGD 3501
            C+ C  PGH    CP    +R ++ +  NN+                  K         +
Sbjct: 320  CFNCGDPGHYADKCP--KPRRVKNASAPNNSN-------------VPAPKARVNHVAAAE 364

Query: 3500 ADNA--VVEGTLLLFNSWVKVLFDPGATHSFIS 3408
            A NA  VV GT  + +    VLFD GATHSF+S
Sbjct: 365  AQNAPDVVLGTFPVNSIPATVLFDSGATHSFLS 397


>gb|ABC94893.1| polyprotein [Oryza australiensis]
          Length = 1469

 Score =  673 bits (1736), Expect(4) = 0.0
 Identities = 330/573 (57%), Positives = 423/573 (73%)
 Frame = -2

Query: 3369 IRKTVHVIKPVASVSLGRICRSCIVRVGDQELSGDLIVLGMTSFDVILGMDWFAKYRALV 3190
            +++ + V  P   +++   C +  +R+ D     +L+VL   + DVILGMDW  K   ++
Sbjct: 404  LKRPMLVHSPGGDITVPHACINVPIRIRDVVFLSNLMVLSPQTIDVILGMDWLTKNNGII 463

Query: 3189 DCYRKGITFLSEYGVSFCFDAVRYSPDILSSIILCGRQSKLCRNLSFLSHMDSDSKSSGV 3010
            DC R+ +T  + +G          SP      I   +  KLC   + +  M        +
Sbjct: 464  DCSRREVTVSTPWG----------SP----MSITMDQNPKLCEQAAGVFTM--------L 501

Query: 3009 TIEEIPIVRDYVDVFPDDLPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQL 2830
             +  +P+V++Y DVFP++LP +PP R+IEF IDL+PGT PIS  PYRM + EL+EL KQ+
Sbjct: 502  PLGGMPVVQEYPDVFPEELPGMPPDRDIEFIIDLMPGTAPISKRPYRMPANELEELKKQI 561

Query: 2829 SELQEKGFTQTSTSPWGAPVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQL 2650
             ELQEKGF + S+SPWGAPVLFVKKKDGS+ +C+DYR LN VT+KN+YPLPRID LFDQL
Sbjct: 562  RELQEKGFVRPSSSPWGAPVLFVKKKDGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQL 621

Query: 2649 KGAQFFSKIDLRSGYHQLLIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRV 2470
            KGAQ FSKIDLRSGYHQL IR  DIPKTAF TRYG +EF VM FGLTNAPA FM+LM++V
Sbjct: 622  KGAQVFSKIDLRSGYHQLKIRAGDIPKTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKV 681

Query: 2469 F*PLLDKFIVVFIDDVLIYSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLG 2290
            F   LDKF+VVFIDD+LIYSK  +EHAEHLR+ +E LR H+LYAKFSKCEFW+ EV FLG
Sbjct: 682  FMEYLDKFVVVFIDDILIYSKNDEEHAEHLRLVLEKLREHRLYAKFSKCEFWLKEVAFLG 741

Query: 2289 HVVTKDGICVDPVKIEAVLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRK 2110
            HVV+  G+ VDP K+EAV++W+ PK+V E+RSFLGLA Y RRF+EGFS++A P+T+L +K
Sbjct: 742  HVVSAGGVAVDPAKVEAVMEWKAPKSVTEVRSFLGLAGYYRRFIEGFSTVARPMTQLLKK 801

Query: 2109 GVKFVWGTECETSFQTLKEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDY 1930
              KF W  +C+ +F  LKEKLT+AP+L  P++   +V++ D S +GLG VLMQ G+VV Y
Sbjct: 802  EKKFEWNEKCQKAFDQLKEKLTTAPILTLPDNRKDFVMYCDASRQGLGGVLMQDGKVVAY 861

Query: 1929 ASRQLKSHEQNYPTHDLELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQ 1750
            ASRQL+ HE+NYPTHDLELAA+V ALKIWRHYL     ++++DHKSL+Y FTQ DLNLRQ
Sbjct: 862  ASRQLRPHEENYPTHDLELAAVVHALKIWRHYLIGNHCDVYTDHKSLKYFFTQPDLNLRQ 921

Query: 1749 LRWMEFIKDYEFNLQYHPGKANVVADALSRKSR 1651
             RW+E IKDY+  + YHPGKANVVADALSRK++
Sbjct: 922  RRWLELIKDYDLGIHYHPGKANVVADALSRKAQ 954



 Score =  293 bits (751), Expect(4) = 0.0
 Identities = 141/287 (49%), Positives = 197/287 (68%), Gaps = 2/287 (0%)
 Frame = -1

Query: 1555 NIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--L 1382
            ++ V+P+L  +I E Q+ +++  EI  +   G   +   +     L Y +R+ VP    L
Sbjct: 986  SLEVRPLLRTQIEEAQRGNEETQEIKERMAAGRAQEF-SVDDKGILWYKKRICVPERGGL 1044

Query: 1381 KRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPS 1202
            +  ++ EAH+S YS+HPG +KMY+DL+ ++WW  MK+D+AEYV+ C  CQ+V  EH+ P+
Sbjct: 1045 RELILKEAHESAYSLHPGSTKMYQDLKGEYWWPNMKRDVAEYVAVCDVCQRVKAEHQRPA 1104

Query: 1201 GLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLS 1022
            GLLQPL + EWKW+ I M F+ GLP+T +G D++W IVDRLTK+A F+ +K       L+
Sbjct: 1105 GLLQPLKIPEWKWDEIGMDFIVGLPKTATGYDSIWVIVDRLTKTARFITVKTNYNSAKLA 1164

Query: 1021 QLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQ 842
            +LY+  IV LHGVP  I+SDR  +FTS FW    +A+ + L+FSTA+HPQTDG++ER  Q
Sbjct: 1165 ELYMSRIVCLHGVPKRIISDRGTQFTSHFWSKVHEALGSHLAFSTAYHPQTDGQTERTNQ 1224

Query: 841  ILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
            +LEDMLRACALDF   W   LP  EFSYNNSYQAS+ M+P  AL+GR
Sbjct: 1225 VLEDMLRACALDFTKDWEKCLPYAEFSYNNSYQASLKMSPNEALFGR 1271



 Score =  161 bits (408), Expect(4) = 0.0
 Identities = 80/172 (46%), Positives = 113/172 (65%), Gaps = 2/172 (1%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ W E GE ++ GP+ ++E  EK+++I+ RL A+QSRQKSYAD +R  L F  G+ 
Sbjct: 1273 CRTPLMWSETGERAVFGPDIIKEAEEKVRLIRDRLQAAQSRQKSYADTRRRELEFKEGDY 1332

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++L+V+P +G  RF  KG LAPRY+GPF I  R GEV+Y+LELP  +  VH VFH+S L+
Sbjct: 1333 VYLKVSPLRGTQRFKVKGKLAPRYVGPFLISARRGEVAYQLELPEHLSDVHPVFHVSQLK 1392

Query: 338  --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 189
              L  P+E   ++   I V    TY E P++ILD  E+  RTK+ R  K  W
Sbjct: 1393 KCLRVPEEQAPLE--AIHVHSDLTYPEHPIKILDEAEKKTRTKSWRMYKVQW 1442



 Score = 38.9 bits (89), Expect(4) = 0.0
 Identities = 20/46 (43%), Positives = 29/46 (63%)
 Frame = -3

Query: 3497 DNAVVEGTLLLFNSWVKVLFDPGATHSFISDRVVLSLDLHYEPLEK 3360
            D +V+ G   + ++ VKVLFD GA+HSFIS +V     LH   L++
Sbjct: 361  DQSVLMGMFSINSTLVKVLFDSGASHSFISSQVSKQHHLHQVALKR 406


>ref|XP_007224141.1| hypothetical protein PRUPE_ppa016115mg [Prunus persica]
            gi|462421077|gb|EMJ25340.1| hypothetical protein
            PRUPE_ppa016115mg [Prunus persica]
          Length = 1269

 Score =  670 bits (1729), Expect(3) = 0.0
 Identities = 331/540 (61%), Positives = 413/540 (76%)
 Frame = -2

Query: 3276 LSGDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFCFDAVRYSPDILSS 3097
            +S DLI LGM   DVILGMDW A++RA VDC+R  + F S       F    Y   + + 
Sbjct: 258  ISADLIPLGMVDLDVILGMDWLARHRASVDCFRNEVVFRSPGRPKVTF----YGEPMTAK 313

Query: 3096 IILCGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDDLPDIPPKREIEFT 2917
             +L     K C   S+++++  D++ +G+ +E+I +V+D+ DVFP+DLP +P  REIEF 
Sbjct: 314  RLL----RKGCS--SYIAYV-IDTRDNGLRLEDIRVVQDFPDVFPEDLPGLPHHREIEFV 366

Query: 2916 IDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGAPVLFVKKKDGSLL 2737
            I+L PGT PIS  PYRMA AEL+EL  QL EL +KGF + S SPWGAPVLFVKKKDG++ 
Sbjct: 367  IELAPGTNPISQAPYRMAPAELRELKIQLQELVDKGFIRLSFSPWGAPVLFVKKKDGTMR 426

Query: 2736 LCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQLLIRYEDIPKTAFR 2557
            LCIDYR+LN +TV+NRYPLPRID LFDQLKGA+ FSKIDLRSGYHQL +R ED+ KTAFR
Sbjct: 427  LCIDYRQLNKITVRNRYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRVREEDVTKTAFR 486

Query: 2556 TRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLIYSKTKQEHAEHLR 2377
            TRYGH+EF VMPFGLTNAPA+FMDLM+RVF   LD+F++VF+DD+L+YSK+++ H +HL 
Sbjct: 487  TRYGHYEFLVMPFGLTNAPAAFMDLMNRVFRRYLDRFVIVFVDDILVYSKSQKAHMKHLN 546

Query: 2376 ITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAVLKWEKPKNVFEIR 2197
            + + TLR  QLYAKFSKC+FW+  V FLGHV++ +GI VDP KIEAV+ W +P +V EIR
Sbjct: 547  LVLRTLRRRQLYAKFSKCQFWLDIVSFLGHVISAEGIYVDPQKIEAVVNWLRPTSVTEIR 606

Query: 2196 SFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLKEKLTSAPVLVTPE 2017
            SFLGLARY RRFVEGFS++AAPLT LTRKGVKFVW  +CE +F               P+
Sbjct: 607  SFLGLARYYRRFVEGFSTIAAPLTYLTRKGVKFVWSDKCEETF---------------PD 651

Query: 2016 SGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLELAAIVFALKIWRH 1837
                +VI+SD S +GLGCVLMQHGRV+ YASRQLK HE NYP HDLELAA+VFALKIWRH
Sbjct: 652  DSGNFVIYSDASQQGLGCVLMQHGRVIAYASRQLKKHELNYPVHDLELAAVVFALKIWRH 711

Query: 1836 YLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHPGKANVVADALSRK 1657
            YLY E  +IF+ HKSL+Y+FTQ++LNLRQ RW+E IKDY+  +++HPG+ANVVADAL  +
Sbjct: 712  YLYGETCQIFTYHKSLKYLFTQKELNLRQRRWLELIKDYDCTIEHHPGRANVVADALKMR 771



 Score =  328 bits (841), Expect(3) = 0.0
 Identities = 164/301 (54%), Positives = 216/301 (71%), Gaps = 2/301 (0%)
 Frame = -1

Query: 1597 GLSLEDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GL 1418
            GL ++++G+ + + +  V+PVL++ I+  Q     +  +  +  +G   D   +++D  L
Sbjct: 776  GLDVDNQGALLATLH--VRPVLVERILAAQSQDPLICTLRVEVANGDRTDC-SVRNDGAL 832

Query: 1417 RYSRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRC 1244
                +L VP+   LKR++++EAH+S +++HPG +KMY  LR  +WW  MKK+IAEYV RC
Sbjct: 833  MVGNKLYVPNDEALKREILEEAHESAFAMHPGSTKMYHTLREHYWWPFMKKEIAEYVRRC 892

Query: 1243 LTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAH 1064
            L CQQV  E + PSGLLQPL + EWKWE ITM FV  LPRT S  D VW IVDRLTKSA+
Sbjct: 893  LICQQVKAERQKPSGLLQPLPIPEWKWERITMDFVFKLPRTQSKHDGVWVIVDRLTKSAY 952

Query: 1063 FLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTA 884
            FLP++   +L  L++L++ EIVRLH VP+SIVSDRDPRFTS FW    +A  T L FSTA
Sbjct: 953  FLPVRANYSLNKLAKLFIDEIVRLHRVPISIVSDRDPRFTSRFWTKLNEAFGTQLQFSTA 1012

Query: 883  FHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYG 704
            FH QTDG+SER IQ LE+MLRACAL F+G W ++LPL+EF+YNNSYQ SIGM+PF ALYG
Sbjct: 1013 FHSQTDGQSERTIQTLENMLRACALQFRGDWDEKLPLMEFAYNNSYQVSIGMSPFNALYG 1072

Query: 703  R 701
            R
Sbjct: 1073 R 1073



 Score =  181 bits (458), Expect(3) = 0.0
 Identities = 87/175 (49%), Positives = 125/175 (71%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P  WDEVGE  L+  E V  T +++QII++RL  +Q RQKSYADN+R  L F V + 
Sbjct: 1075 CRTPFYWDEVGEHRLVVSEDVELTKKQVQIIRERLKTAQDRQKSYADNRRKDLQFEVRDW 1134

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            +FL+++P KGVVRFG +G L+ RYIGP+ II+RVG V+Y L LP+ + ++H+VFHIS+LR
Sbjct: 1135 VFLKLSPWKGVVRFGKQGKLSSRYIGPYEIIERVGPVAYRLALPSDLARLHDVFHISMLR 1194

Query: 338  LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLWKYRMV 174
             Y  D SH+++ + +E++   TY E P++ILD K QVLR++    VK LW+   V
Sbjct: 1195 KYISDPSHVLEEQPVELEADFTYVEQPVQILDWKTQVLRSREIPLVKVLWRSHTV 1249


>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
          Length = 1573

 Score =  669 bits (1726), Expect(3) = 0.0
 Identities = 335/555 (60%), Positives = 413/555 (74%)
 Frame = -2

Query: 3318 RICRSCIVRVGDQELSGDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSF 3139
            RIC+ C++ + D+ L+ DL +L MT +DVILGMDW A YRA++DC+R+ I F    G   
Sbjct: 576  RICKGCVITLADRALNVDLRILDMTGYDVILGMDWLAVYRAVIDCHRRRIIFCLPEG--- 632

Query: 3138 CFDAVRYSPDILSSIILCGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPD 2959
                  +  D       C R      +++FL+ +    K+    I EIP+VR + DVFPD
Sbjct: 633  ------FESDP------CYRYVLRKGSINFLACLRGKEKAQK-DITEIPVVRKFQDVFPD 679

Query: 2958 DLPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWG 2779
            +LP +PP RE +F+I++ PGT PISV+PYRMA  ELKEL  QL EL  KGF + STSPWG
Sbjct: 680  ELPGLPPHREFDFSIEVYPGTDPISVSPYRMAPLELKELKTQLDELLGKGFIRPSTSPWG 739

Query: 2778 APVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQ 2599
            APVLFVKKKD +L LCI+YRKLN VTVKN+YPLPRID               DLR+GYHQ
Sbjct: 740  APVLFVKKKDDTLRLCIEYRKLNRVTVKNKYPLPRID---------------DLRTGYHQ 784

Query: 2598 LLIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVL 2419
            L +R +D+ KTAFRTRYG++EF VMPFGLTNAPA+FMDLM+RVF   LD+F++VF+DD+L
Sbjct: 785  LRVREDDVSKTAFRTRYGNYEFLVMPFGLTNAPAAFMDLMNRVFRAYLDRFVIVFVDDIL 844

Query: 2418 IYSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEA 2239
            IYS++ +EH +HL  T+ TLR HQLY K  K EFW+ EV FLGHVV++ GI VD  K+EA
Sbjct: 845  IYSRSLEEHKQHLVTTLGTLRRHQLYGKLDKSEFWLTEVNFLGHVVSEAGIAVDHSKVEA 904

Query: 2238 VLKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTL 2059
            + +W++P NVFE+RSFLGLA Y RRFVE FS +AAP+T+LTRK VKF W  ECE +FQ L
Sbjct: 905  IQEWQRPTNVFEVRSFLGLAGYYRRFVEDFSRIAAPMTQLTRKWVKFDWNEECENAFQEL 964

Query: 2058 KEKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDL 1879
            K+KLT+APVL  P SG  ++I+ D S  GLGCVLMQ G+VV YASRQLK HE+NY  HDL
Sbjct: 965  KQKLTTAPVLTAPISGELFMIYCDASTVGLGCVLMQQGKVVAYASRQLKQHERNYLAHDL 1024

Query: 1878 ELAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYH 1699
            ELAA+VFALK W HYLY EKFE++SDHKSL+YIFTQ+DLN RQ RWME ++DY+F L YH
Sbjct: 1025 ELAAMVFALKTWIHYLYGEKFEVYSDHKSLKYIFTQKDLNSRQRRWMETLEDYDFALHYH 1084

Query: 1698 PGKANVVADALSRKS 1654
            PGKANVVADALSRKS
Sbjct: 1085 PGKANVVADALSRKS 1099



 Score =  362 bits (930), Expect(3) = 0.0
 Identities = 178/322 (55%), Positives = 239/322 (74%), Gaps = 6/322 (1%)
 Frame = -1

Query: 1645 LACLGLHTWKLYEAVEGLSL----EDKGSEVHSCNIVVQPVLIQEIVETQKNSDDLNEIC 1478
            L  LGL  +++Y  +E   L    E +G  ++S  I  +P++IQ IVE Q + + L ++ 
Sbjct: 1103 LFSLGLREFEMYAVIEDFELCLVQEGRGPCLYS--ISARPMVIQRIVEAQVHDEFLEKVK 1160

Query: 1477 RKFFDGTGPDG*EIQSD*GLRYSRRLVVPS--VLKRKVMDEAHKSKYSIHPGDSKMYKDL 1304
             +   G   +   +  D  +R+  RL VP    L+ +++ +AH++KY+IHPG++KMY+DL
Sbjct: 1161 AQLVAGEIDENWSMYEDGSVRFKGRLCVPKDVELRNELLADAHRAKYTIHPGNTKMYQDL 1220

Query: 1303 RRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQPLSVAEWKWEHITMGFVSGLPR 1124
            +RQF WSGMK+DIA++V+ C  CQQV  EH+ P+ LLQPL + +WKW++ITM FV GLPR
Sbjct: 1221 KRQFXWSGMKRDIAQFVANCQICQQVKAEHQRPAELLQPLPIPKWKWDNITMDFVIGLPR 1280

Query: 1123 TTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYVKEIVRLHGVPLSIVSDRDPRFT 944
            T S  + VW IVDRLTKSAHFL +K TD++ +L++LY++EIVRLHG+P+SIVSDRDP+FT
Sbjct: 1281 TRSKKNGVWVIVDRLTKSAHFLAMKTTDSMNSLAKLYIQEIVRLHGIPVSIVSDRDPKFT 1340

Query: 943  SMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILEDMLRACALDFKGSWIDQLPLIEF 764
            S FW S Q+A+ T L+FST FHPQTDG+SERVIQILEDMLRAC LDF G+W D LPL EF
Sbjct: 1341 SQFWQSLQRALGTQLNFSTVFHPQTDGQSERVIQILEDMLRACVLDFGGNWADYLPLAEF 1400

Query: 763  SYNNSYQASIGMAPF*ALYGRP 698
            +YNN YQ+SIGMAP+ ALYGRP
Sbjct: 1401 AYNNXYQSSIGMAPYEALYGRP 1422



 Score =  182 bits (463), Expect(3) = 0.0
 Identities = 81/151 (53%), Positives = 117/151 (77%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C+SP+CW E+GE  LLGPE V+ETTEKIQ+I+++L  +Q RQK+YAD +R PL F  G+ 
Sbjct: 1423 CRSPLCWIEMGESHLLGPEIVQETTEKIQLIKEKLKTAQDRQKNYADKRRRPLEFEEGDW 1482

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            +F++V+PR+G+ RFG KG LAPR++GPF+I KRVG V+Y+L LP Q+  VH+VFH+S+LR
Sbjct: 1483 VFVKVSPRRGIFRFGKKGKLAPRFVGPFQIDKRVGPVTYKLILPQQLSLVHDVFHVSMLR 1542

Query: 338  LYKPDESHIIDWKGIEVQDGATYEEAPLRIL 246
               PD + ++D + +++ +  +Y E PLRIL
Sbjct: 1543 KCTPDPTWVVDLQDVQISEDTSYVEEPLRIL 1573



 Score = 66.6 bits (161), Expect = 2e-07
 Identities = 45/132 (34%), Positives = 57/132 (43%), Gaps = 22/132 (16%)
 Frame = -3

Query: 3686 RKCYECNKPGHLRRNCPLFNGQRFQ-------------------HGNRS---NNAQHXXX 3573
            R CY C    HL R CPL   Q  Q                    G R+   N+      
Sbjct: 430  RVCYGCGAGDHLWRACPLRGAQXAQPQSQGSSQQQPMPQLPPAAQGTRTTTMNSQTRSSQ 489

Query: 3572 XXXXXXXXXXXQGKVFATVETTGDADNAVVEGTLLLFNSWVKVLFDPGATHSFISDRVVL 3393
                        G+VFA   T  D D  +VEG +L++++WV+VLFD GATHSFIS     
Sbjct: 490  GSNARGRGRPAAGRVFALTPTEPDKDALLVEGMILVYSTWVRVLFDTGATHSFISASCAN 549

Query: 3392 SLDLHYEPLEKL 3357
            +L L  E +E L
Sbjct: 550  ALGLKSERVENL 561


>gb|AAV31274.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|54287634|gb|AAV31378.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1400

 Score =  667 bits (1721), Expect(4) = 0.0
 Identities = 328/553 (59%), Positives = 410/553 (74%), Gaps = 2/553 (0%)
 Frame = -2

Query: 3309 RSCIVRVGDQELS--GDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFC 3136
            RS  VR+  Q +    +LI+L     DVILGMDW A+++ ++DC  + +T +S  G    
Sbjct: 421  RSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKVTLISNDGRVVT 480

Query: 3135 FDAVRYSPDILSSIILCGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDD 2956
              A                          LS     S+ + +T+EEIPIVR+Y DVFPDD
Sbjct: 481  VHA--------------------------LSSESLRSRLNQITLEEIPIVREYPDVFPDD 514

Query: 2955 LPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGA 2776
            LP +PPKR+IEF IDL+PGTTPI   PYRMA+ EL E+ +Q+ +L +KG+ + S+SPWGA
Sbjct: 515  LPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGA 574

Query: 2775 PVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQL 2596
            PV+FV+KKD +  +C+DYR LN VT+KN+YPLPRID LFDQLKGA  FSKIDLRSGYHQL
Sbjct: 575  PVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQL 634

Query: 2595 LIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLI 2416
             I+ EDIPKTAF TRYG FE  VM FGLTNAPA FM+LM++VF   LDKF+VVFIDD+LI
Sbjct: 635  RIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILI 694

Query: 2415 YSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAV 2236
            YS+TK+EH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++  G+ VDP  +E+V
Sbjct: 695  YSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESV 754

Query: 2235 LKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLK 2056
              W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W  ECE SFQ LK
Sbjct: 755  TNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELK 814

Query: 2055 EKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLE 1876
             +L SAP+L+ P+   G+ ++ D S  GLGCVLMQ G+VV YASRQL+ HE+NYPTHDLE
Sbjct: 815  NRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLE 874

Query: 1875 LAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHP 1696
            LAA+V ALKIWRHYL+  + E+++DHKSL+YIFTQ DLN+RQ RW+E IKDY+  + YHP
Sbjct: 875  LAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHP 934

Query: 1695 GKANVVADALSRK 1657
            GKANVVADALSRK
Sbjct: 935  GKANVVADALSRK 947



 Score =  313 bits (803), Expect(4) = 0.0
 Identities = 157/283 (55%), Positives = 199/283 (70%), Gaps = 2/283 (0%)
 Frame = -1

Query: 1543 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1370
            +P LI ++ E Q N  D+ EI +    G      E +    +    R+ VP    LK  +
Sbjct: 985  KPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQG-TVWLGERICVPDNKDLKDVI 1043

Query: 1369 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1190
            + EAH + YSIHPG +KMY+DL+ +FWW+ MK++IAEYV+ C  CQ+V  EH+ P+GLLQ
Sbjct: 1044 LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1103

Query: 1189 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1010
            PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T +   L++LY+
Sbjct: 1104 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1163

Query: 1009 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 830
              IV  HGVP  IVSDR  +FTS FW   Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1164 ARIVCSHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1223

Query: 829  MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
            MLRACALDF GSW   LP  EFSYNNSYQASI MAP+ ALYGR
Sbjct: 1224 MLRACALDFGGSWDKNLPYAEFSYNNSYQASIQMAPYEALYGR 1266



 Score =  145 bits (365), Expect(4) = 0.0
 Identities = 64/120 (53%), Positives = 91/120 (75%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ WD+ GE  + G + +RE  EK++IIQ+RL  +QSR KSYADN+R  LSF  G+ 
Sbjct: 1268 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1327

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++LRV P +GV RF +KG LAPR++GP++I+ R GEV+Y+LELP  +  VHNVFH+S L+
Sbjct: 1328 VYLRVTPFRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1387



 Score = 33.5 bits (75), Expect(4) = 0.0
 Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
 Frame = -3

Query: 3680 CYECNKPGHLRRNCPLFNGQRFQHGNRSNNAQHXXXXXXXXXXXXXXQGKVFATVETTGD 3501
            C+ C  PGH    CP     +      ++ A                  K         +
Sbjct: 312  CFNCGDPGHYADKCPKPRRVKVVPAQSNSTAP---------------ASKARVNHVAAAE 356

Query: 3500 ADNA--VVEGTLLLFNSWVKVLFDPGATHSFIS 3408
            A +A  V+ GT  + +    VLFD GATHSF+S
Sbjct: 357  AQDAPDVILGTFSVNSVPATVLFDSGATHSFLS 389


>dbj|BAH79971.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 1477

 Score =  666 bits (1719), Expect(3) = 0.0
 Identities = 328/553 (59%), Positives = 408/553 (73%), Gaps = 2/553 (0%)
 Frame = -2

Query: 3309 RSCIVRVGDQELS--GDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFC 3136
            RS  VR+  Q +    +LI+L     DVILGMDW  +++ ++DC  K +T  S  G    
Sbjct: 425  RSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLTRHKGVIDCANKKVTLTSNDGRVVT 484

Query: 3135 FDAVRYSPDILSSIILCGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDD 2956
              A                          LS     S+ + +T+EEIPIVR+Y DVFPDD
Sbjct: 485  VQA--------------------------LSSESLRSRLNQITLEEIPIVREYPDVFPDD 518

Query: 2955 LPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGA 2776
            LP +PPKR+IEF IDL+PGTTPI   PYRMA+ EL E+ +Q+ +L +KG+ + S+SPWGA
Sbjct: 519  LPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGA 578

Query: 2775 PVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQL 2596
            PV+FV+KKD +  +C+DYR LN VT+KN+YPLPRID LFDQLKGA  FSKIDLRSGYHQL
Sbjct: 579  PVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQL 638

Query: 2595 LIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLI 2416
             I+ EDIPKTAF TRYG FE  VM FGLTNAPA FM+LM++VF   LDKF+VVFIDD+LI
Sbjct: 639  RIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILI 698

Query: 2415 YSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAV 2236
            YS+TK+EH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++  G+ VDP  +E+V
Sbjct: 699  YSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESV 758

Query: 2235 LKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLK 2056
              W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W  ECE SFQ LK
Sbjct: 759  TNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSQECEQSFQELK 818

Query: 2055 EKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLE 1876
             +L SAP+L+ P+   G+ ++ D S  GLGCVLMQ G+VV YASRQL+ HE+NYPTHDLE
Sbjct: 819  SRLVSAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLE 878

Query: 1875 LAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHP 1696
            LAA+V ALKIWRHYL+  + E+++DHKSL+YIFTQ DLN+RQ RW+E IKDY+  + YHP
Sbjct: 879  LAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHP 938

Query: 1695 GKANVVADALSRK 1657
            GKANVVADALSRK
Sbjct: 939  GKANVVADALSRK 951



 Score =  314 bits (805), Expect(3) = 0.0
 Identities = 157/283 (55%), Positives = 199/283 (70%), Gaps = 2/283 (0%)
 Frame = -1

Query: 1543 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1370
            +P LI ++ E Q N  D+ EI +    G      E +    +    R+ VP    LK  +
Sbjct: 989  KPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQG-TVWLGERICVPDNKDLKDAI 1047

Query: 1369 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1190
            + EAH + YSIHPG +KMY+DL+ +FWW+ MK+ IAEYV+ C  CQ+V  EH+ P+GLLQ
Sbjct: 1048 LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKRKIAEYVAVCDVCQRVKAEHQKPAGLLQ 1107

Query: 1189 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1010
            PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T +   L++LY+
Sbjct: 1108 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1167

Query: 1009 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 830
              IV LHGVP  IVSDR  +FTS FW   Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1168 ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1227

Query: 829  MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
            MLRACALDF GSW   LP  EFSYNNSYQAS+ MAP+ ALYGR
Sbjct: 1228 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1270



 Score =  171 bits (434), Expect(3) = 0.0
 Identities = 85/172 (49%), Positives = 118/172 (68%), Gaps = 2/172 (1%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ WD+ GE  + G + +RE  EK++IIQ+RL  +QSR KSYADN+R  LSF  G+ 
Sbjct: 1272 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1331

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++LRV P +GV RF +KG LAPR++GP++I+ R GEV+Y+LELP  +  VHNV H+S L+
Sbjct: 1332 VYLRVTPLRGVHRFRTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVSHVSQLK 1391

Query: 338  --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 189
              L  P E   I+   IEVQ+  TY E P+RIL+T E+  R +  RF K  W
Sbjct: 1392 KCLRVPTEEANIE--QIEVQEDLTYVEKPIRILETSERRTRNRVIRFCKVQW 1441


>gb|ABA95022.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1473

 Score =  665 bits (1717), Expect(3) = 0.0
 Identities = 323/537 (60%), Positives = 401/537 (74%)
 Frame = -2

Query: 3267 DLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFCFDAVRYSPDILSSIIL 3088
            +LI+L     DVILGMDW A+++ ++DC  + +T  S  G      A             
Sbjct: 437  NLILLESKDLDVILGMDWLARHKGVIDCANRKVTLTSNDGQVVTVHA------------- 483

Query: 3087 CGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDDLPDIPPKREIEFTIDL 2908
                         LS     S+ + +T+EEIPIVR+Y DVFPDDLP +PPKR+IEF IDL
Sbjct: 484  -------------LSSESLRSRLNQITLEEIPIVREYSDVFPDDLPGMPPKRDIEFRIDL 530

Query: 2907 LPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGAPVLFVKKKDGSLLLCI 2728
            +PGTTPI   PYRMA+ EL E+ +Q+ +L +KG+ + S+SPWGAPV+FV+KKD +  +C+
Sbjct: 531  VPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCV 590

Query: 2727 DYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQLLIRYEDIPKTAFRTRY 2548
            DYR LN VT+KN+YPLPRID LFDQLKGA  FSKIDLRSGYHQL I+ EDIPKTAF TRY
Sbjct: 591  DYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRY 650

Query: 2547 GHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLIYSKTKQEHAEHLRITM 2368
            G FE  VM FGLTNAPA FM+LM++VF   LDKF+VVFIDD+LIYS+TK+EH EHLR+ +
Sbjct: 651  GLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLAL 710

Query: 2367 ETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAVLKWEKPKNVFEIRSFL 2188
            E LR HQLYAKFSKCEFW+ EV+FLGHV++  G+ VDP  +E+V  W++PK V EIRSFL
Sbjct: 711  EKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFL 770

Query: 2187 GLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLKEKLTSAPVLVTPESGV 2008
            GLA Y RRF+E FS +A P+T+L +K VK+ W  ECE SFQ LK +L SAP+L+ P    
Sbjct: 771  GLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLVSAPILILPNPKK 830

Query: 2007 GYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLELAAIVFALKIWRHYLY 1828
            G+ ++ D S  GLGCVLMQ G+VV YASRQL+ HE+NYPTHDLELAA+V ALKIWRHYL+
Sbjct: 831  GFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLF 890

Query: 1827 DEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHPGKANVVADALSRK 1657
              + E+++DHKSL+YIFTQ DLN+RQ RW+E IKDY+  + YHPGKANVVADALSRK
Sbjct: 891  GTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRK 947



 Score =  313 bits (802), Expect(3) = 0.0
 Identities = 156/283 (55%), Positives = 199/283 (70%), Gaps = 2/283 (0%)
 Frame = -1

Query: 1543 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1370
            +P LI ++ E Q N  D+ EI +    G      E +    +    R+ VP    LK  +
Sbjct: 985  KPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQG-TVWLGERICVPDNKDLKDAI 1043

Query: 1369 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1190
            + EAH + YSIHPG +KMY+DL+ +FWW+ MK++IAEYV+ C  CQ+V  EH+ P+GLLQ
Sbjct: 1044 LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1103

Query: 1189 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1010
            PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T +   L++LY+
Sbjct: 1104 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1163

Query: 1009 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 830
              IV LHGVP  IVSDR  +FTS FW   Q+ M + L+FS A+HPQTDG++ERV QILED
Sbjct: 1164 ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSIAYHPQTDGQTERVNQILED 1223

Query: 829  MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
            MLRACALDF GSW   LP  EFSYNNSYQAS+ MAP+ ALYGR
Sbjct: 1224 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1266



 Score =  175 bits (444), Expect(3) = 0.0
 Identities = 86/172 (50%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ WD+ GE  + G + +RE  EK+++IQ+RL  +QSR KSYADN+R  LSF  GE 
Sbjct: 1268 CRTPLLWDQTGERQVFGTDILREAEEKVKVIQERLRVAQSRHKSYADNRRRDLSFEEGEY 1327

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++LRV P +GV RF +KG LAPR++GP++I+ R GEV+Y+LELP  +  VHNVFH+S L+
Sbjct: 1328 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1387

Query: 338  --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 189
              L  P E   I+   IEVQ+  TY E P+RIL+T E+  R +  RF K  W
Sbjct: 1388 KCLRVPTEEANIE--QIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQW 1437


>gb|ABA98266.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1473

 Score =  665 bits (1716), Expect(3) = 0.0
 Identities = 329/553 (59%), Positives = 412/553 (74%), Gaps = 2/553 (0%)
 Frame = -2

Query: 3309 RSCIVRVGDQELS--GDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFC 3136
            RS  VR+  Q +    +LI+L     DVILGMDW A+++ ++DC  K +T  S       
Sbjct: 421  RSPSVRIEIQGVPFLANLILLKSKDLDVILGMDWLARHKGVIDCANKKVTLNS------- 473

Query: 3135 FDAVRYSPDILSSIILCGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDD 2956
            +D    +   LSS  L  R ++                   +T+EEIPIVR+Y DVFPDD
Sbjct: 474  YDGRVVTVHALSSESLRSRLNQ-------------------ITLEEIPIVREYPDVFPDD 514

Query: 2955 LPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGA 2776
            LP +PPKR+IEF IDL+PGTTPI   PYRMA+ EL E+ +Q+ +L +KG+ + S+SPWGA
Sbjct: 515  LPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGA 574

Query: 2775 PVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQL 2596
            PV+FV+KKD +  +C+DYR LN VT+KN+YPLPRID LFDQLKGA  FSKIDLRSGYHQL
Sbjct: 575  PVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQL 634

Query: 2595 LIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLI 2416
             I+ EDIPKTAF TRYG FE  VM FGLTNAPA FM+LM++VF   LDKF+VVFIDD+LI
Sbjct: 635  RIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILI 694

Query: 2415 YSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAV 2236
            YS+TK+EH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++  G+ VDP  +E+V
Sbjct: 695  YSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESV 754

Query: 2235 LKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLK 2056
              W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W  ECE SFQ LK
Sbjct: 755  TNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECERSFQELK 814

Query: 2055 EKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLE 1876
             +L SAP+L+ P+   G+ ++ D S  GLGCVLMQ G+VV YASRQL+ HE+NYPTHD+E
Sbjct: 815  SRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIE 874

Query: 1875 LAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHP 1696
            LAA+V ALKIWRHYL+  + E+++DHKSL+YIFTQ DLN+RQ RW+E IKDY+  + YHP
Sbjct: 875  LAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHP 934

Query: 1695 GKANVVADALSRK 1657
            GKANVVADALSRK
Sbjct: 935  GKANVVADALSRK 947



 Score =  313 bits (803), Expect(3) = 0.0
 Identities = 156/283 (55%), Positives = 200/283 (70%), Gaps = 2/283 (0%)
 Frame = -1

Query: 1543 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1370
            +P LI ++ E Q N  D+ +I +    G      E +    +    R+ VP    LK  +
Sbjct: 985  KPTLIDQVREAQINDPDIQKIKKNMRRGKAIGFLEDEHG-TVWLGERICVPDNKDLKDAI 1043

Query: 1369 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1190
            + EAH + YSIHPG +KMY+DL+ +FWW+ MK++IAEYV+ C  CQ+V  EH+ P+GLLQ
Sbjct: 1044 LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1103

Query: 1189 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1010
            PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T +   L++LY+
Sbjct: 1104 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1163

Query: 1009 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 830
              IV LHGVP  IVSDR  +FTS FW   Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1164 ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1223

Query: 829  MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
            MLRACALDF GSW   LP  EFSYNNSYQAS+ MAP+ ALYGR
Sbjct: 1224 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1266



 Score =  174 bits (441), Expect(3) = 0.0
 Identities = 86/172 (50%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ WD+ GE  + G + +RE  EK++IIQ+RL  +QSR KSYADN+R  LSF  G+ 
Sbjct: 1268 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1327

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++LRV P +GV RF +KG LAPR++GP++I+ R GEV+Y+LELP  +  VHNVFH+S L+
Sbjct: 1328 VYLRVTPFRGVHRFRTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1387

Query: 338  --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 189
              L  P E   I+   IEVQ+  TY E P+RIL+T E+  R +  RF K  W
Sbjct: 1388 KCLRVPTEEANIE--QIEVQEDLTYVEKPIRILETSERRTRNRVIRFCKVQW 1437


>gb|AAS98511.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1678

 Score =  665 bits (1715), Expect(3) = 0.0
 Identities = 328/553 (59%), Positives = 411/553 (74%), Gaps = 2/553 (0%)
 Frame = -2

Query: 3309 RSCIVRVGDQELS--GDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFC 3136
            RS  VR+  Q +    +LI+L     DVILGMDW A+++ ++DC  + +T  S       
Sbjct: 626  RSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKVTLNS------- 678

Query: 3135 FDAVRYSPDILSSIILCGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDD 2956
            +D    +   LSS  L  R ++                   +T+EEIPIVR+Y DVFPDD
Sbjct: 679  YDGRVVTVHALSSEFLRSRLNQ-------------------ITLEEIPIVREYPDVFPDD 719

Query: 2955 LPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGA 2776
            LP +PPKR+IEF IDL+PGTTPI   PYRMA+ EL E+ +Q+ +L +KG+ + S+SPWGA
Sbjct: 720  LPGMPPKRDIEFRIDLVPGTTPIHTRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGA 779

Query: 2775 PVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQL 2596
            PV+FV+KKD +  +C+DYR LN VT+KN YPLPRID LFDQLKGA  FSKIDLRSGYHQL
Sbjct: 780  PVIFVEKKDHTQRMCVDYRALNDVTIKNEYPLPRIDDLFDQLKGATVFSKIDLRSGYHQL 839

Query: 2595 LIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLI 2416
             I+ EDIPKTAF TRYG FE  VM FGLTNAPA FM+LM++VF   LDKF+VVFIDD+LI
Sbjct: 840  RIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILI 899

Query: 2415 YSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAV 2236
            YS+TK+EH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++  G+ VDP  +E+V
Sbjct: 900  YSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESV 959

Query: 2235 LKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLK 2056
              W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W  ECE SFQ LK
Sbjct: 960  TNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELK 1019

Query: 2055 EKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLE 1876
             +L SAP+L+ P+   G+ ++ D S  GLGCVLMQ G+VV YASRQL+ HE+NYPTHD+E
Sbjct: 1020 SRLISAPILILPDPKKGFQVYCDASKFGLGCVLMQEGKVVAYASRQLRPHEKNYPTHDIE 1079

Query: 1875 LAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHP 1696
            LAA+V ALKIWRHYL+  + E+++DHKSL+YIFTQ DLN+RQ RW+E IKDY+  + YHP
Sbjct: 1080 LAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHP 1139

Query: 1695 GKANVVADALSRK 1657
            GKANVVADALSRK
Sbjct: 1140 GKANVVADALSRK 1152



 Score =  315 bits (806), Expect(3) = 0.0
 Identities = 157/283 (55%), Positives = 200/283 (70%), Gaps = 2/283 (0%)
 Frame = -1

Query: 1543 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1370
            +P LI ++ E Q N  D+ EI +K   G      E +    +    R+ VP    LK  +
Sbjct: 1190 KPTLIDQVREAQINDPDIQEIKKKMRRGKAIGFLEDEHG-TVWLGERICVPDNKDLKDAI 1248

Query: 1369 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1190
            + EAH + YSIHPG +KMY+DL+ +FWW+ MK++IAEYV+ C  CQ+V  EH+ P+GLLQ
Sbjct: 1249 LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1308

Query: 1189 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1010
            PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T +   L++LY+
Sbjct: 1309 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1368

Query: 1009 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 830
              IV LHGVP  IVSDR  +FTS FW   Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1369 ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1428

Query: 829  MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
            MLRACALDF GSW   LP  EF YNNSYQAS+ MAP+ ALYGR
Sbjct: 1429 MLRACALDFGGSWDKNLPYAEFLYNNSYQASLQMAPYEALYGR 1471



 Score =  174 bits (442), Expect(3) = 0.0
 Identities = 86/172 (50%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ WD+ GE  + G + +RE  EK++IIQ+RL  +QSR KSYADN+R  LSF  G+ 
Sbjct: 1473 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1532

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++LRV P +GV RF +KG LAPR++GP++I+ R GEV+Y+LELP  +  VHNVFH+S L+
Sbjct: 1533 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1592

Query: 338  --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 189
              L  P E   I+   IEVQ+  TY E P+RIL+T E+  R +  RF K  W
Sbjct: 1593 KCLRVPTEEANIE--QIEVQEDLTYVEKPIRILETSERRTRNRVIRFCKVQW 1642


>gb|AAN09852.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1715

 Score =  664 bits (1713), Expect(3) = 0.0
 Identities = 327/553 (59%), Positives = 412/553 (74%), Gaps = 2/553 (0%)
 Frame = -2

Query: 3309 RSCIVRVGDQELS--GDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFC 3136
            RS  VR+  Q +    +LI+L     DVILGMDW A+++ ++DC  + +T  S       
Sbjct: 663  RSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKVTLNS------- 715

Query: 3135 FDAVRYSPDILSSIILCGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDD 2956
            +D    +   LSS  L  R ++                   +T+EEIPIVR+Y DVFPDD
Sbjct: 716  YDGRVVTVHALSSESLRSRLNQ-------------------ITLEEIPIVREYPDVFPDD 756

Query: 2955 LPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGA 2776
            LP +PPKR+IEF IDL+PGTTPI   PYRMA+ EL E+ +Q+ +L +KG+ + S+SPWGA
Sbjct: 757  LPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGA 816

Query: 2775 PVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQL 2596
            PV+FV+KKD +  +C+DYR LN VT+KN+YPLPRID LFDQLKGA  FSKIDLRSGYHQL
Sbjct: 817  PVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQL 876

Query: 2595 LIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLI 2416
             I+ EDIPKTAF TRYG FE  VM FGLTNAPA FM+LM++VF   LDKF+VVFIDD+LI
Sbjct: 877  RIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILI 936

Query: 2415 YSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAV 2236
            YS+TK+EH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGH+++  G+ VDP  +E+V
Sbjct: 937  YSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHIISAGGVAVDPSNVESV 996

Query: 2235 LKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLK 2056
              W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W  ECE SFQ LK
Sbjct: 997  TNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELK 1056

Query: 2055 EKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLE 1876
             +L SAP+L+ P+   G+ ++ D S  GLGCVLMQ G+VV YASRQL+ HE+NYPTHD+E
Sbjct: 1057 SRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIE 1116

Query: 1875 LAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHP 1696
            LAA+V ALKIWRHYL+  + E+++DHKSL+YIFTQ DLN+RQ RW+E IKDY+  + YHP
Sbjct: 1117 LAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQSDLNMRQRRWLELIKDYDMGIHYHP 1176

Query: 1695 GKANVVADALSRK 1657
            GKANVVADALSRK
Sbjct: 1177 GKANVVADALSRK 1189



 Score =  315 bits (807), Expect(3) = 0.0
 Identities = 157/283 (55%), Positives = 200/283 (70%), Gaps = 2/283 (0%)
 Frame = -1

Query: 1543 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1370
            +P LI ++ E Q N  D+ EI +    G      E +    +    R+ VP    LK  +
Sbjct: 1227 KPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEHG-TVWLGERICVPDNKDLKDAI 1285

Query: 1369 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1190
            + EAH + YSIHPG +KMY+DL+ +FWW+ MK++IAEYV+ C  CQ+V  EH+ P+GLLQ
Sbjct: 1286 LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1345

Query: 1189 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1010
            PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T +   L++LY+
Sbjct: 1346 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1405

Query: 1009 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 830
              IV LHGVP  IVSDR  +FTS FW   Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1406 ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1465

Query: 829  MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
            MLRACALDF GSW   LP  EFSYNNSYQAS+ MAP+ ALYGR
Sbjct: 1466 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1508



 Score =  174 bits (442), Expect(3) = 0.0
 Identities = 86/172 (50%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ WD+ GE  + G + +RE  EK++IIQ+RL  +QSR KSYADN+R  LSF  G+ 
Sbjct: 1510 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1569

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++LRV P +GV RF +KG LAPR++GP++I+ R GEV+Y+LELP  +  VHNVFH+S L+
Sbjct: 1570 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1629

Query: 338  --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 189
              L  P E   I+   IEVQ+  TY E P+RIL+T E+  R +  RF K  W
Sbjct: 1630 KCLRVPTEEANIE--QIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQW 1679


>gb|ABG65971.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1475

 Score =  664 bits (1713), Expect(3) = 0.0
 Identities = 327/553 (59%), Positives = 412/553 (74%), Gaps = 2/553 (0%)
 Frame = -2

Query: 3309 RSCIVRVGDQELS--GDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFC 3136
            RS  VR+  Q +    +LI+L     DVILGMDW A+++ ++DC  + +T  S       
Sbjct: 423  RSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKVTLNS------- 475

Query: 3135 FDAVRYSPDILSSIILCGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDD 2956
            +D    +   LSS  L  R ++                   +T+EEIPIVR+Y DVFPDD
Sbjct: 476  YDGRVVTVHALSSESLRSRLNQ-------------------ITLEEIPIVREYPDVFPDD 516

Query: 2955 LPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGA 2776
            LP +PPKR+IEF IDL+PGTTPI   PYRMA+ EL E+ +Q+ +L +KG+ + S+SPWGA
Sbjct: 517  LPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGA 576

Query: 2775 PVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQL 2596
            PV+FV+KKD +  +C+DYR LN VT+KN+YPLPRID LFDQLKGA  FSKIDLRSGYHQL
Sbjct: 577  PVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQL 636

Query: 2595 LIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLI 2416
             I+ EDIPKTAF TRYG FE  VM FGLTNAPA FM+LM++VF   LDKF+VVFIDD+LI
Sbjct: 637  RIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILI 696

Query: 2415 YSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAV 2236
            YS+TK+EH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGH+++  G+ VDP  +E+V
Sbjct: 697  YSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHIISAGGVAVDPSNVESV 756

Query: 2235 LKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLK 2056
              W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W  ECE SFQ LK
Sbjct: 757  TNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELK 816

Query: 2055 EKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLE 1876
             +L SAP+L+ P+   G+ ++ D S  GLGCVLMQ G+VV YASRQL+ HE+NYPTHD+E
Sbjct: 817  SRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIE 876

Query: 1875 LAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHP 1696
            LAA+V ALKIWRHYL+  + E+++DHKSL+YIFTQ DLN+RQ RW+E IKDY+  + YHP
Sbjct: 877  LAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQSDLNMRQRRWLELIKDYDMGIHYHP 936

Query: 1695 GKANVVADALSRK 1657
            GKANVVADALSRK
Sbjct: 937  GKANVVADALSRK 949



 Score =  315 bits (807), Expect(3) = 0.0
 Identities = 157/283 (55%), Positives = 200/283 (70%), Gaps = 2/283 (0%)
 Frame = -1

Query: 1543 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1370
            +P LI ++ E Q N  D+ EI +    G      E +    +    R+ VP    LK  +
Sbjct: 987  KPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEHG-TVWLGERICVPDNKDLKDAI 1045

Query: 1369 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1190
            + EAH + YSIHPG +KMY+DL+ +FWW+ MK++IAEYV+ C  CQ+V  EH+ P+GLLQ
Sbjct: 1046 LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1105

Query: 1189 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1010
            PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T +   L++LY+
Sbjct: 1106 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1165

Query: 1009 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 830
              IV LHGVP  IVSDR  +FTS FW   Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1166 ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1225

Query: 829  MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
            MLRACALDF GSW   LP  EFSYNNSYQAS+ MAP+ ALYGR
Sbjct: 1226 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1268



 Score =  174 bits (442), Expect(3) = 0.0
 Identities = 86/172 (50%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ WD+ GE  + G + +RE  EK++IIQ+RL  +QSR KSYADN+R  LSF  G+ 
Sbjct: 1270 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1329

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++LRV P +GV RF +KG LAPR++GP++I+ R GEV+Y+LELP  +  VHNVFH+S L+
Sbjct: 1330 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1389

Query: 338  --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 189
              L  P E   I+   IEVQ+  TY E P+RIL+T E+  R +  RF K  W
Sbjct: 1390 KCLRVPTEEANIE--QIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQW 1439


>gb|ABA96087.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1111

 Score =  664 bits (1712), Expect(3) = 0.0
 Identities = 328/553 (59%), Positives = 411/553 (74%), Gaps = 2/553 (0%)
 Frame = -2

Query: 3309 RSCIVRVGDQELS--GDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFC 3136
            RS  VR+  Q +    +LI+L     DVILGMDW A+++ ++DC  K +T  S       
Sbjct: 59   RSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANKKVTLTS------- 111

Query: 3135 FDAVRYSPDILSSIILCGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDD 2956
            +D    +   LSS  L  R ++                   +T+EEIPIVR+Y DVFPDD
Sbjct: 112  YDGRVVTVHALSSESLRSRLNQ-------------------ITLEEIPIVREYPDVFPDD 152

Query: 2955 LPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGA 2776
            LP +PPKR+IEF IDL+PGTTPI   PYRMA+ EL E+ +Q+ +L +KG+ + S+SPWGA
Sbjct: 153  LPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGA 212

Query: 2775 PVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQL 2596
            PV+FV+KKD +  +C+DYR LN VT+KN+YPLPRID LFDQLKGA  F KIDLRSGYHQL
Sbjct: 213  PVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFFKIDLRSGYHQL 272

Query: 2595 LIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLI 2416
             I+ EDIPKTAF TRYG FE  VM FGLTNAPA FM+LM++VF   LDKF+VVFIDD+LI
Sbjct: 273  RIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILI 332

Query: 2415 YSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAV 2236
            YS+TK+EH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++  G+ VDP  +E+V
Sbjct: 333  YSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESV 392

Query: 2235 LKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLK 2056
              W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W  ECE SFQ LK
Sbjct: 393  TNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELK 452

Query: 2055 EKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLE 1876
             +L SAP+L+ P+   G+ ++ D S  GLGCVLMQ G+VV YASRQL+ HE+NYPTHD+E
Sbjct: 453  SRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIE 512

Query: 1875 LAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHP 1696
            LAA+V ALKIWRHYL+  + E+++DHKSL+YIFTQ DLN+RQ RW+E IKDY+  + YHP
Sbjct: 513  LAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHP 572

Query: 1695 GKANVVADALSRK 1657
            GKANVVADALSRK
Sbjct: 573  GKANVVADALSRK 585



 Score =  311 bits (798), Expect(3) = 0.0
 Identities = 155/283 (54%), Positives = 198/283 (69%), Gaps = 2/283 (0%)
 Frame = -1

Query: 1543 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1370
            +P LI ++ E Q N  D+ EI +    G      E +    +    R+ VP    LK  V
Sbjct: 623  KPTLIDQVREAQNNDPDIQEIKKNMRRGKAIGFLEDEQG-TVWLGERICVPDNKDLKDAV 681

Query: 1369 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1190
            + EAH + YSIHPG +KMY+DL+ +FWW+ MK++IAEYV+ C  CQ+V  EH+ P+GLLQ
Sbjct: 682  LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 741

Query: 1189 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1010
            PL + EWKWE I M F++GLPRT+ G D++W IVDRLTK AHF+P+K T +   L++LY+
Sbjct: 742  PLKIPEWKWEEIGMDFITGLPRTSLGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 801

Query: 1009 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 830
              IV LHGVP  IVSDR  +FTS FW   Q+ M + L+FSTA+HP+TDG++ERV QILED
Sbjct: 802  ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPRTDGQTERVNQILED 861

Query: 829  MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
            MLRACALDF GSW   LP  EFSYNNSYQ S+ MAP+ ALYGR
Sbjct: 862  MLRACALDFGGSWDKNLPYAEFSYNNSYQTSLQMAPYEALYGR 904



 Score =  175 bits (443), Expect(3) = 0.0
 Identities = 86/172 (50%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ WD+ GE  + G + +RE  EK++IIQ+RL  +QSR KSYADN+R  LSF  G+ 
Sbjct: 906  CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 965

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++LRV P +GV RF +KG LAPR++GP++I+ R GEV+Y+LELP  +  VHNVFH+S L+
Sbjct: 966  VYLRVTPFRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1025

Query: 338  --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 189
              L  P E   +D   IEVQ+  TY E P+RIL+T E+  R +  RF K  W
Sbjct: 1026 KCLRVPTEEANLD--QIEVQEDLTYVEKPIRILETSERRTRNRVIRFCKVQW 1075


>gb|AAX96433.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77550058|gb|ABA92855.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1636

 Score =  664 bits (1712), Expect(3) = 0.0
 Identities = 328/553 (59%), Positives = 409/553 (73%), Gaps = 2/553 (0%)
 Frame = -2

Query: 3309 RSCIVRVGDQELS--GDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFC 3136
            RS  VR+  QE+    +LI+L     DVILGMDW A+Y+ ++DC  + +T  S  G    
Sbjct: 584  RSPSVRIEIQEVPFLANLILLESKDLDVILGMDWLARYKGVIDCANRKVTLTSNDGRVVT 643

Query: 3135 FDAVRYSPDILSSIILCGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDD 2956
              A                          LS     S+ + +T+EEIPIVR+Y DVFPDD
Sbjct: 644  VHA--------------------------LSSESLRSRLNQMTLEEIPIVREYPDVFPDD 677

Query: 2955 LPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGA 2776
            LP +PPKR+IEF IDL+PGTTPI   PYRMA+ EL E+ +Q+ +L +KG+ + S+SPWGA
Sbjct: 678  LPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGA 737

Query: 2775 PVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQL 2596
            PV+FV+KKD +  +C+DYR LN VT+KN+YPLPRID LFDQLKGA  FSKIDLRSGYHQL
Sbjct: 738  PVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQL 797

Query: 2595 LIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLI 2416
             I+ EDIPKTAF TRYG FE  VM FGLTNAPA FM+LM++VF   LDKF+VVFIDD+LI
Sbjct: 798  RIKEEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILI 857

Query: 2415 YSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAV 2236
            YS+TK+EH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++  G+ VDP  +E+V
Sbjct: 858  YSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLFEVKFLGHVISAGGVAVDPSNVESV 917

Query: 2235 LKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLK 2056
              W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W  ECE SFQ LK
Sbjct: 918  TNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELK 977

Query: 2055 EKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLE 1876
             +L SAP+L+ P+   G+ ++ D S  GLGCVLMQ G+VV YASRQL+ HE+N PTHDLE
Sbjct: 978  NRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNNPTHDLE 1037

Query: 1875 LAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHP 1696
            LAA+V ALKIWRHYL+  + E+++DHKSL+YIFTQ DLN+RQ RW+E IKDY+  + YHP
Sbjct: 1038 LAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHP 1097

Query: 1695 GKANVVADALSRK 1657
            GKANVVA+ALSRK
Sbjct: 1098 GKANVVANALSRK 1110



 Score =  315 bits (806), Expect(3) = 0.0
 Identities = 156/283 (55%), Positives = 200/283 (70%), Gaps = 2/283 (0%)
 Frame = -1

Query: 1543 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1370
            +P LI ++ E Q N  D+ EI +    G      E +    +   +R+ VP    LK  +
Sbjct: 1148 KPTLIDQVREAQINDPDIQEIKKNMRRGKAISFLEDEQG-TVWLGKRICVPDNKDLKDAI 1206

Query: 1369 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1190
            + EAH + YSIHPG +KMY+DL+ +FWW+ MK++IAEYV+ C  CQ+V  EH+ P+GLLQ
Sbjct: 1207 LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1266

Query: 1189 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1010
            PL + EWKWE I M F++GLPRT+ G D++W IVDRLTK AHF+P+K T +   L++LY+
Sbjct: 1267 PLKIPEWKWEEIGMDFITGLPRTSLGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1326

Query: 1009 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 830
              IV LHGVP  IVSDR  +FTS FW   Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1327 ARIVCLHGVPKKIVSDRGSQFTSKFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1386

Query: 829  MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
            MLRACALDF GSW   LP  EFSYNNSYQAS+ MAP+ ALYGR
Sbjct: 1387 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1429



 Score =  166 bits (420), Expect(3) = 0.0
 Identities = 78/170 (45%), Positives = 113/170 (66%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ WD+ GE  + G + +RE  EK++IIQ+RL  +QSR KSYADN+R  LSF  G+ 
Sbjct: 1431 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFDEGDY 1490

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++LRV P +GV RF + G LAPR++GP++I+ R GEV+Y+LELP  +  +HNVFH+S L+
Sbjct: 1491 VYLRVTPLRGVHRFHTNGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGIHNVFHVSQLK 1550

Query: 338  LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 189
                  +   + + IEVQ+  TY E P+RIL   E+  R +   F K  W
Sbjct: 1551 KCLRVPTEEANLEQIEVQEDLTYVEKPIRILKIDERRTRNRVIHFCKVQW 1600


>gb|AAM93458.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|31430677|gb|AAP52558.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1406

 Score =  664 bits (1712), Expect(3) = 0.0
 Identities = 328/553 (59%), Positives = 412/553 (74%), Gaps = 2/553 (0%)
 Frame = -2

Query: 3309 RSCIVRVGDQELS--GDLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFC 3136
            RS  VR+  Q +    +LI+L     DVILGMDW A+++ ++DC  + +T  S       
Sbjct: 354  RSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKVTLNS------- 406

Query: 3135 FDAVRYSPDILSSIILCGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDD 2956
            +D    +   LSS  L  R ++                   +T+EEIPIVR+Y DVFPDD
Sbjct: 407  YDGRVVTVHALSSESLRSRLNQ-------------------ITLEEIPIVREYPDVFPDD 447

Query: 2955 LPDIPPKREIEFTIDLLPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGA 2776
            LP +PPKR+IEF IDL+PGTTPI   PYRMA+ EL E+ +Q+ +L +KG+ + S+SPWGA
Sbjct: 448  LPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGA 507

Query: 2775 PVLFVKKKDGSLLLCIDYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQL 2596
            PV+FV+KKD +  +C+DYR LN VT+KN+YPLPRID LFDQLKGA  FSKIDLRSGYHQL
Sbjct: 508  PVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQL 567

Query: 2595 LIRYEDIPKTAFRTRYGHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLI 2416
             I+ EDIPKTAF TRYG FE  VM FGLTNAPA FM+LM++VF   LDKF+VVFIDD+LI
Sbjct: 568  RIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILI 627

Query: 2415 YSKTKQEHAEHLRITMETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAV 2236
            YS+TK+EH EHLR+ +E LR HQLYAKFSKCEFW+ EV+FLGHV++  G+ VDP  +E+V
Sbjct: 628  YSQTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESV 687

Query: 2235 LKWEKPKNVFEIRSFLGLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLK 2056
              W++PK V EIRSFLGLA Y RRF+E FS +A P+T+L +K VK+ W  ECE SFQ LK
Sbjct: 688  TNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECERSFQELK 747

Query: 2055 EKLTSAPVLVTPESGVGYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLE 1876
             +L SAP+L+ P+   G+ ++ D S  GLGCVLMQ G+VV YASRQL+ HE+NYPTHD+E
Sbjct: 748  SRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIE 807

Query: 1875 LAAIVFALKIWRHYLYDEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHP 1696
            LAA+V ALKIWRHYL+  + E+++DHKSL+YIFTQ DLN+RQ RW+E IKDY+  + YHP
Sbjct: 808  LAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHP 867

Query: 1695 GKANVVADALSRK 1657
            GKANVVADALSRK
Sbjct: 868  GKANVVADALSRK 880



 Score =  315 bits (807), Expect(3) = 0.0
 Identities = 157/283 (55%), Positives = 200/283 (70%), Gaps = 2/283 (0%)
 Frame = -1

Query: 1543 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1370
            +P LI ++ E Q N  D+ EI +    G      E +    +    R+ VP    LK  +
Sbjct: 918  KPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEHG-TVWLGERICVPDNKDLKDAI 976

Query: 1369 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1190
            + EAH + YSIHPG +KMY+DL+ +FWW+ MK++IAEYV+ C  CQ+V  EH+ P+GLLQ
Sbjct: 977  LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1036

Query: 1189 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1010
            PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T +   L++LY+
Sbjct: 1037 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1096

Query: 1009 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 830
              IV LHGVP  IVSDR  +FTS FW   Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1097 ARIVCLHGVPKKIVSDRGSQFTSNFWEKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1156

Query: 829  MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
            MLRACALDF GSW   LP  EFSYNNSYQAS+ MAP+ ALYGR
Sbjct: 1157 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1199



 Score =  176 bits (445), Expect(3) = 0.0
 Identities = 87/172 (50%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ WD+ GE  + G + +RE  EK++IIQ+RL  +QSR KSYADN+R  LSF  G+ 
Sbjct: 1201 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRYKSYADNRRRDLSFEEGDY 1260

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++LRV P +GV RF +KG LAPR++GP++I+ R GEV+Y+LELP  +  VHNVFH+S L+
Sbjct: 1261 VYLRVTPLRGVHRFQTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1320

Query: 338  --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 189
              L  P E   ID   IEVQ+  TY E P+RIL+T E+  R +  RF K  W
Sbjct: 1321 KCLRVPTEEANID--QIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQW 1370


>gb|AAQ56454.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|34015280|gb|AAQ56471.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1735

 Score =  664 bits (1712), Expect(3) = 0.0
 Identities = 323/537 (60%), Positives = 401/537 (74%)
 Frame = -2

Query: 3267 DLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFCFDAVRYSPDILSSIIL 3088
            +LI+L     DVILGMDW A++R ++DC  + +T  S  G      A             
Sbjct: 699  NLILLESKDLDVILGMDWLARHRGVIDCANRKVTLTSNDGRVVTVHA------------- 745

Query: 3087 CGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDDLPDIPPKREIEFTIDL 2908
                         LS     S+ + +T+EEIPIVR+Y DVFPDDLP +PPKR+IEF IDL
Sbjct: 746  -------------LSSESLRSRLNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDL 792

Query: 2907 LPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGAPVLFVKKKDGSLLLCI 2728
            +PGTTPI   PYRMA+ EL E+ +Q+ +L +KG+ + S+SPWGAPV+FV+KKD +  +C+
Sbjct: 793  VPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCV 852

Query: 2727 DYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQLLIRYEDIPKTAFRTRY 2548
            DYR LN VT+KN+YPLPRID LFDQLKGA  FSKIDLRSGYHQL I+ EDIPKTAF TRY
Sbjct: 853  DYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRY 912

Query: 2547 GHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLIYSKTKQEHAEHLRITM 2368
            G FE  VM FGLTNAPA FM+LM++VF   LDKF+VVFIDD+LIYS+TK+EH EHLR+ +
Sbjct: 913  GLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLAL 972

Query: 2367 ETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAVLKWEKPKNVFEIRSFL 2188
            E LR HQLYAKFSKCEFW+ EV+FLGHV++  G+ VDP  +E+V  W++PK V EIRSFL
Sbjct: 973  EKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFL 1032

Query: 2187 GLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLKEKLTSAPVLVTPESGV 2008
            GLA Y RRF+E FS +A P+T+L +K VK+ W  ECE SFQ LK +L SAP+L+ P+   
Sbjct: 1033 GLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKK 1092

Query: 2007 GYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLELAAIVFALKIWRHYLY 1828
            G+ ++ D S  GLGCVLMQ G+VV YASRQL+ HE+NYPTHDLELAA+V ALKIW HYL+
Sbjct: 1093 GFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWCHYLF 1152

Query: 1827 DEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHPGKANVVADALSRK 1657
              + E+++DHKSL+YIFTQ DLN+RQ RW+E IKDY+  + YHPGKANVVADALSRK
Sbjct: 1153 GTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRK 1209



 Score =  313 bits (802), Expect(3) = 0.0
 Identities = 156/283 (55%), Positives = 200/283 (70%), Gaps = 2/283 (0%)
 Frame = -1

Query: 1543 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1370
            +P LI ++ E Q N  D+ EI +    G      E +    +    R+ VP    LK  +
Sbjct: 1247 KPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQG-TVWLGERICVPDNKDLKDAI 1305

Query: 1369 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1190
            + EAH + YSIHPG +K+Y+DL+ +FWW+ MK++IAEYV+ C  CQ+V  EH+ P+GLLQ
Sbjct: 1306 LKEAHDTLYSIHPGSTKVYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1365

Query: 1189 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1010
            PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T +   L++LY+
Sbjct: 1366 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1425

Query: 1009 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 830
              IV LHGVP  IVSDR  +FTS FW   Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1426 ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMVSKLNFSTAYHPQTDGQTERVNQILED 1485

Query: 829  MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
            MLRACALDF GSW   LP  EFSYNNSYQAS+ MAP+ ALYGR
Sbjct: 1486 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1528



 Score =  172 bits (436), Expect(3) = 0.0
 Identities = 82/170 (48%), Positives = 116/170 (68%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ WD+ GE  + G + +RE  EK++IIQ+RL  +QSR KSYADN+R  LSF  G+ 
Sbjct: 1530 CRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1589

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++LRV P +GV RF +KG LAPR++GP++I+ R GEV+Y+LELP  +  VHNVFH+S L+
Sbjct: 1590 VYLRVTPFRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLK 1649

Query: 338  LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 189
                  +   + + IEVQ+  TY E P+RIL T E+  R +  RF K  W
Sbjct: 1650 KCLRVPTEEANLEQIEVQEDLTYVEKPIRILATSERRTRNRVIRFCKVQW 1699


>emb|CAD40208.2| OSJNBa0019J05.6 [Oryza sativa Japonica Group]
          Length = 1616

 Score =  664 bits (1712), Expect(3) = 0.0
 Identities = 323/537 (60%), Positives = 406/537 (75%)
 Frame = -2

Query: 3267 DLIVLGMTSFDVILGMDWFAKYRALVDCYRKGITFLSEYGVSFCFDAVRYSPDILSSIIL 3088
            +LI+L     DVILGMDW A+++ ++DC  + +T  S       +D    +   LSS  L
Sbjct: 580  NLILLKSKDLDVILGMDWLARHKGVIDCANRKVTLNS-------YDGRVVTVHALSSESL 632

Query: 3087 CGRQSKLCRNLSFLSHMDSDSKSSGVTIEEIPIVRDYVDVFPDDLPDIPPKREIEFTIDL 2908
              R ++                   +T+EEIPIVR+Y DVFPDDLP +PPKR+IEF IDL
Sbjct: 633  RSRLNQ-------------------ITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDL 673

Query: 2907 LPGTTPISVTPYRMASAELKELDKQLSELQEKGFTQTSTSPWGAPVLFVKKKDGSLLLCI 2728
            +PGTTPI   PYRMA+ EL E+ +Q+ +L +KG+ + S+SPWGAPV+FV+KKD +  +C+
Sbjct: 674  VPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPVIFVEKKDHTQRMCV 733

Query: 2727 DYRKLNVVTVKNRYPLPRIDYLFDQLKGAQFFSKIDLRSGYHQLLIRYEDIPKTAFRTRY 2548
            DYR LN VT+KN+YPLPRID LFDQLKGA  FSKIDLRSGYHQL I+ EDIPKTAF TRY
Sbjct: 734  DYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRY 793

Query: 2547 GHFEFHVMPFGLTNAPASFMDLMHRVF*PLLDKFIVVFIDDVLIYSKTKQEHAEHLRITM 2368
            G F+  VM FGLTNAPA FM+LM++VF   LDKF+VVFIDD+LIYS+TK+EH EHLR+ +
Sbjct: 794  GLFKCTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLAL 853

Query: 2367 ETLRNHQLYAKFSKCEFWIHEVQFLGHVVTKDGICVDPVKIEAVLKWEKPKNVFEIRSFL 2188
            E LR HQLYAKFSKCEFW+ EV+FLGHV++  G+ VDP  +E+V  W++PK V EIRSFL
Sbjct: 854  EKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFL 913

Query: 2187 GLARY*RRFVEGFSSLAAPLTKLTRKGVKFVWGTECETSFQTLKEKLTSAPVLVTPESGV 2008
            GLA Y RRF+E FS +A P+T+L +K VK+ W  ECE SFQ LK +L SAP+L+ P+   
Sbjct: 914  GLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKSRLISAPILILPDPKK 973

Query: 2007 GYVIFSDVSLKGLGCVLMQHGRVVDYASRQLKSHEQNYPTHDLELAAIVFALKIWRHYLY 1828
            G+ ++ DVS  GLGCVLMQ G+VV YASRQL+ HE+NYPTHD+ELAA+V ALKIWRHYL+
Sbjct: 974  GFQVYCDVSKLGLGCVLMQDGKVVAYASRQLRPHEKNYPTHDIELAAVVHALKIWRHYLF 1033

Query: 1827 DEKFEIFSDHKSLRYIFTQRDLNLRQLRWMEFIKDYEFNLQYHPGKANVVADALSRK 1657
              + E+++DHKSL+YIFTQ DLN+RQ RW+E IKDY+  + YHPGKANVVADALSRK
Sbjct: 1034 GTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRK 1090



 Score =  317 bits (813), Expect(3) = 0.0
 Identities = 158/283 (55%), Positives = 201/283 (71%), Gaps = 2/283 (0%)
 Frame = -1

Query: 1543 QPVLIQEIVETQKNSDDLNEICRKFFDGTGPDG*EIQSD*GLRYSRRLVVPSV--LKRKV 1370
            +P LI ++ E Q N  D+ EI +    G      E +    +   +R+ VP    LK  +
Sbjct: 1128 KPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQG-TVWLGKRICVPDNKDLKDAI 1186

Query: 1369 MDEAHKSKYSIHPGDSKMYKDLRRQFWWSGMKKDIAEYVSRCLTCQQVNIEHRSPSGLLQ 1190
            + EAH + YSIHPG +KMY+DLR +FWW+ MK++IAEYV+ C  CQ+V  EH+ P+GLLQ
Sbjct: 1187 LKEAHDTLYSIHPGSTKMYQDLRERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1246

Query: 1189 PLSVAEWKWEHITMGFVSGLPRTTSGCDTVWAIVDRLTKSAHFLPIKKTDTLGTLSQLYV 1010
            PL + EWKWE I M F++GLPRT+SG D++W IVDRLTK AHF+P+K T +   L++LY+
Sbjct: 1247 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1306

Query: 1009 KEIVRLHGVPLSIVSDRDPRFTSMFW*SFQKAMSTTLSFSTAFHPQTDGKSERVIQILED 830
              IV LHGVP  IVSDR  +FTS FW   Q+ M + L+FSTA+HPQTDG++ERV QILED
Sbjct: 1307 ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1366

Query: 829  MLRACALDFKGSWIDQLPLIEFSYNNSYQASIGMAPF*ALYGR 701
            MLRACALDF GSW   LP  EFSYNNSYQAS+ MAP+ ALYGR
Sbjct: 1367 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1409



 Score =  172 bits (437), Expect(3) = 0.0
 Identities = 85/172 (49%), Positives = 118/172 (68%), Gaps = 2/172 (1%)
 Frame = -3

Query: 698  CKSPVCWDEVGEESLLGPEYVRETTEKIQIIQKRLLASQSRQKSYADNKRSPLSFFVGES 519
            C++P+ WD+ GE  + G + +RE  EK+++IQ+RL  +QSR KSYADN+R  LSF  G+ 
Sbjct: 1411 CRTPLLWDQTGERQVFGTDILREAEEKVKVIQERLRVAQSRHKSYADNRRRDLSFEEGDY 1470

Query: 518  IFLRVNPRKGVVRFGSKGNLAPRYIGPFRIIKRVGEVSYELELPAQMGKVHNVFHISVLR 339
            ++LRV P +GV RF +KG LAPR++GP++I  R GEV+Y+LELP  +  VHNVFH+S L+
Sbjct: 1471 VYLRVTPLRGVHRFHTKGKLAPRFVGPYKIASRRGEVAYQLELPQSLAGVHNVFHVSQLK 1530

Query: 338  --LYKPDESHIIDWKGIEVQDGATYEEAPLRILDTKEQVLRTKTTRFVKFLW 189
              L  P E   I+   IEVQ+  TY E P+RIL+T E+  R +  RF K  W
Sbjct: 1531 KCLRVPTEEANIE--QIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQW 1580