BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00011114
         (842 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008346277.1| PREDICTED: replication factor A protein 1-li...    48   7e-07
gb|AFW88907.1| hypothetical protein ZEAMMB73_503872 [Zea mays]         50   4e-06
ref|XP_008660314.1| PREDICTED: replication factor A protein 1-li...    50   4e-06
ref|NP_001152059.1| retrotransposon protein [Zea mays] gi|195652...    49   8e-06

>ref|XP_008346277.1| PREDICTED: replication factor A protein 1-like [Malus domestica]
          Length = 495

 Score = 48.1 bits (113), Expect(3) = 7e-07
 Identities = 32/116 (27%), Positives = 53/116 (45%)
 Frame = -2

Query: 535 RELTLENISCMRIKATLWGDSTSELTRNLEAHELNPQPXXXXXXXXXVKEYLGKASLSST 356
           R+L L+N    ++  TLW ++ +      +A +    P         VK+Y GK  L ST
Sbjct: 110 RDLKLQNTRGEQVTVTLWAETATSFQD--DALQSLSSPLFIVLTSLKVKKYKGKPVLGST 167

Query: 355 NATKAYFDLDIPEVLHTRERSSHRTPPFEITVPARVGYNQATQSIADTRKSIFQLL 188
            +T   F+ DIP++   +++  H   P EI   +   Y +        +K+I QLL
Sbjct: 168 GSTVCIFNPDIPQLSEYKQQFEHLKTPIEILQTSAEKYGKGAVIADSEQKTIEQLL 223



 Score = 29.6 bits (65), Expect(3) = 7e-07
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 755 KFDICPKKKMFRPTQNDYRAYFNWNTDITPLETTGASMPRHKFTFTEFEDL 603
           KF +   +K  +   +      N NT I P+E     +P H F   EF++L
Sbjct: 23  KFRLINNRKSNKIVPHXAMVELNKNTTIVPVEKPNQLIPMHWFNLIEFDEL 73



 Score = 22.7 bits (47), Expect(3) = 7e-07
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -1

Query: 146 VCSAKAIGISTEKGWYYLGRHNCTTKLVGNT 54
           VC A  +     KGW+Y     C  K V NT
Sbjct: 236 VCQATIVDYDLTKGWWYKSCPYC-HKSVKNT 265


>gb|AFW88907.1| hypothetical protein ZEAMMB73_503872 [Zea mays]
          Length = 553

 Score = 49.7 bits (117), Expect(2) = 4e-06
 Identities = 27/78 (34%), Positives = 41/78 (52%)
 Frame = -2

Query: 550 NIYFMRELTLENISCMRIKATLWGDSTSELTRNLEAHELNPQPXXXXXXXXXVKEYLGKA 371
           N   +R++ +EN S M +K TLWG+  S  + +   ++ N QP          K + G+ 
Sbjct: 188 NSTIIRDIFIENTSDMSLKITLWGNQASSFSISDVYNQSNNQPIVILLVGFLAKRFKGQP 247

Query: 370 SLSSTNATKAYFDLDIPE 317
            LSST A+  YF+  IPE
Sbjct: 248 YLSSTTASSWYFNPGIPE 265



 Score = 29.3 bits (64), Expect(2) = 4e-06
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = -1

Query: 755 KFDICPKKKMFRPTQNDYRAYFNWNTDITPLETTGASMPRHKFTFTEFEDL 603
           +F + P +  F+P  N++   F   T    ++      PR+ +  T FE++
Sbjct: 108 RFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYKLTCFENI 158


>ref|XP_008660314.1| PREDICTED: replication factor A protein 1-like [Zea mays]
          Length = 525

 Score = 49.7 bits (117), Expect(2) = 4e-06
 Identities = 27/78 (34%), Positives = 41/78 (52%)
 Frame = -2

Query: 550 NIYFMRELTLENISCMRIKATLWGDSTSELTRNLEAHELNPQPXXXXXXXXXVKEYLGKA 371
           N   +R++ +EN S M +K TLWG+  S  + +   ++ N QP          K + G+ 
Sbjct: 158 NSTIIRDIFIENTSDMSLKITLWGNQASSFSISDVYNQSNNQPIVILLVGFLAKRFKGQP 217

Query: 370 SLSSTNATKAYFDLDIPE 317
            LSST A+  YF+  IPE
Sbjct: 218 YLSSTTASSWYFNPGIPE 235



 Score = 29.3 bits (64), Expect(2) = 4e-06
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = -1

Query: 755 KFDICPKKKMFRPTQNDYRAYFNWNTDITPLETTGASMPRHKFTFTEFEDL 603
           +F + P +  F+P  N++   F   T    ++      PR+ +  T FE++
Sbjct: 78  RFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYKLTCFENI 128


>ref|NP_001152059.1| retrotransposon protein [Zea mays] gi|195652219|gb|ACG45577.1|
           retrotransposon protein [Zea mays]
          Length = 525

 Score = 48.5 bits (114), Expect(2) = 8e-06
 Identities = 27/78 (34%), Positives = 40/78 (51%)
 Frame = -2

Query: 550 NIYFMRELTLENISCMRIKATLWGDSTSELTRNLEAHELNPQPXXXXXXXXXVKEYLGKA 371
           N   +R++ ++N S M +K TLWG+  S  + N    + N QP          K + G+ 
Sbjct: 158 NSTIIRDIFIKNTSDMSLKITLWGNQASGFSINDVYSQSNNQPIVILLVGFLAKRFKGQP 217

Query: 370 SLSSTNATKAYFDLDIPE 317
            LSST A+  YF+  IPE
Sbjct: 218 YLSSTTASSWYFNPGIPE 235



 Score = 29.3 bits (64), Expect(2) = 8e-06
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = -1

Query: 755 KFDICPKKKMFRPTQNDYRAYFNWNTDITPLETTGASMPRHKFTFTEFEDL 603
           +F + P +  F+P  N++   F   T    ++      PR+ +  T FE++
Sbjct: 78  RFRVTPSRNYFKPVDNNFMIQFTLYTQAKVVKDPPQVFPRYIYKLTCFENI 128