BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00009926
         (910 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002983424.1| hypothetical protein SELMODRAFT_180179 [Sela...    73   4e-21
ref|XP_002960614.1| hypothetical protein SELMODRAFT_75337 [Selag...    72   1e-20
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...    86   4e-14
ref|XP_007042502.1| DNA-directed RNA polymerase family protein [...    84   2e-13
ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, ...    83   3e-13
ref|XP_012065760.1| PREDICTED: DNA-directed RNA polymerases II, ...    83   3e-13
ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, ...    82   6e-13
gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -li...    82   6e-13
ref|XP_012065701.1| PREDICTED: DNA-directed RNA polymerases II, ...    82   6e-13
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr...    81   1e-12
gb|EMT28290.1| DNA-directed RNA polymerase II subunit RPB3-A [Ae...    81   1e-12
gb|EMS46394.1| DNA-directed RNA polymerase II subunit RPB3-A [Tr...    81   1e-12
gb|EMT18475.1| DNA-directed RNA polymerase II subunit RPB3-A [Ae...    80   3e-12
gb|KMZ68215.1| DNA-directed RNA polymerase [Zostera marina]            79   4e-12
gb|KMT01164.1| hypothetical protein BVRB_9g224160 [Beta vulgaris...    79   4e-12
ref|XP_010691712.1| PREDICTED: DNA-directed RNA polymerases II, ...    79   4e-12
ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, ...    79   4e-12
ref|XP_010241296.1| PREDICTED: DNA-directed RNA polymerases II, ...    79   4e-12
ref|XP_009418294.1| PREDICTED: DNA-directed RNA polymerases II, ...    79   4e-12
ref|XP_003607895.1| RPB3 DNA-directed RNA polymerase II subunit ...    79   5e-12

>ref|XP_002983424.1| hypothetical protein SELMODRAFT_180179 [Selaginella moellendorffii]
           gi|300149109|gb|EFJ15766.1| hypothetical protein
           SELMODRAFT_180179 [Selaginella moellendorffii]
          Length = 320

 Score = 73.2 bits (178), Expect(2) = 4e-21
 Identities = 33/46 (71%), Positives = 40/46 (86%)
 Frame = -3

Query: 695 YEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQVSHVLP 558
           YEPDIHINE++M TL+LEEK+ WV+SSPTKVF+I+P TQQV  V P
Sbjct: 190 YEPDIHINENLMETLSLEEKREWVDSSPTKVFEINPETQQVEVVDP 235



 Score = 56.6 bits (135), Expect(2) = 4e-21
 Identities = 26/34 (76%), Positives = 27/34 (79%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    EL+LRAIARKGI KDHAKWSP ATVTF Y
Sbjct: 157 LRKGQELKLRAIARKGIAKDHAKWSPAATVTFQY 190


>ref|XP_002960614.1| hypothetical protein SELMODRAFT_75337 [Selaginella moellendorffii]
           gi|300171553|gb|EFJ38153.1| hypothetical protein
           SELMODRAFT_75337 [Selaginella moellendorffii]
          Length = 320

 Score = 71.6 bits (174), Expect(2) = 1e-20
 Identities = 31/46 (67%), Positives = 40/46 (86%)
 Frame = -3

Query: 695 YEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQVSHVLP 558
           YEPDIHINE++M TL++EEK+ WV+SSPTKVF+I+P TQQV  + P
Sbjct: 190 YEPDIHINENLMETLSVEEKREWVDSSPTKVFEINPETQQVEVIDP 235



 Score = 56.6 bits (135), Expect(2) = 1e-20
 Identities = 26/34 (76%), Positives = 27/34 (79%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    EL+LRAIARKGI KDHAKWSP ATVTF Y
Sbjct: 157 LRKGQELKLRAIARKGIAKDHAKWSPAATVTFQY 190


>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
           gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
           II subunit, putative [Ricinus communis]
          Length = 318

 Score = 85.9 bits (211), Expect = 4e-14
 Identities = 44/66 (66%), Positives = 51/66 (77%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEPDIHINED+M +L+LEEKQSWVESSPTKVFDIDPNTQQ
Sbjct: 170 KGIGKDHAKWSPAATV-TFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQ 228

Query: 575 VSHVLP 558
           V  V P
Sbjct: 229 VVVVDP 234



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 156 LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 189


>ref|XP_007042502.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
           gi|508706437|gb|EOX98333.1| DNA-directed RNA polymerase
           family protein [Theobroma cacao]
          Length = 318

 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 44/66 (66%), Positives = 51/66 (77%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEP+IHINEDMM TLTLEEKQS+VESSPT+VFDIDPNTQQ
Sbjct: 170 KGIGKDHAKWSPAATV-TFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDIDPNTQQ 228

Query: 575 VSHVLP 558
           V  V P
Sbjct: 229 VVVVDP 234



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 156 LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 189


>ref|XP_010065975.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Eucalyptus grandis] gi|629097957|gb|KCW63722.1|
           hypothetical protein EUGRSUZ_G01370 [Eucalyptus grandis]
          Length = 321

 Score = 83.2 bits (204), Expect = 3e-13
 Identities = 42/66 (63%), Positives = 51/66 (77%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEP+IHINED++ TL+LEEKQSWVESSPTKVFDIDPNT+Q
Sbjct: 173 KGIGKDHAKWSPAATV-TFMYEPEIHINEDLVETLSLEEKQSWVESSPTKVFDIDPNTEQ 231

Query: 575 VSHVLP 558
           V  V P
Sbjct: 232 VLVVDP 237



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 159 LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 192


>ref|XP_012065760.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           isoform X2 [Jatropha curcas]
          Length = 231

 Score = 82.8 bits (203), Expect = 3e-13
 Identities = 43/64 (67%), Positives = 48/64 (75%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEPDIHINED+M TLTLEEKQSWVESSPTKVF IDP TQQ
Sbjct: 169 KGIGKDHAKWSPAATV-TFMYEPDIHINEDLMETLTLEEKQSWVESSPTKVFTIDPVTQQ 227

Query: 575 VSHV 564
           V  V
Sbjct: 228 VLEV 231



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 155 LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 188


>ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Gossypium raimondii] gi|763810754|gb|KJB77656.1|
           hypothetical protein B456_012G149200 [Gossypium
           raimondii]
          Length = 318

 Score = 82.0 bits (201), Expect = 6e-13
 Identities = 43/66 (65%), Positives = 51/66 (77%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEP+IHINEDMM TLTLEEKQS+V+SSPT+VFDIDPNTQQ
Sbjct: 170 KGIGKDHAKWSPAATV-TFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQ 228

Query: 575 VSHVLP 558
           V  V P
Sbjct: 229 VVVVDP 234



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 156 LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 189


>gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -like protein
           [Gossypium arboreum]
          Length = 318

 Score = 82.0 bits (201), Expect = 6e-13
 Identities = 43/66 (65%), Positives = 51/66 (77%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEP+IHINEDMM TLTLEEKQS+V+SSPT+VFDIDPNTQQ
Sbjct: 170 KGIGKDHAKWSPAATV-TFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQ 228

Query: 575 VSHVLP 558
           V  V P
Sbjct: 229 VVVVDP 234



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 156 LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 189


>ref|XP_012065701.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           isoform X1 [Jatropha curcas] gi|643741758|gb|KDP47129.1|
           hypothetical protein JCGZ_22125 [Jatropha curcas]
          Length = 317

 Score = 82.0 bits (201), Expect = 6e-13
 Identities = 42/61 (68%), Positives = 47/61 (77%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEPDIHINED+M TLTLEEKQSWVESSPTKVF IDP TQQ
Sbjct: 169 KGIGKDHAKWSPAATV-TFMYEPDIHINEDLMETLTLEEKQSWVESSPTKVFTIDPVTQQ 227

Query: 575 V 573
           V
Sbjct: 228 V 228



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 155 LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 188


>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
           gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 3-like [Citrus
           sinensis] gi|557524889|gb|ESR36195.1| hypothetical
           protein CICLE_v10028849mg [Citrus clementina]
           gi|641840877|gb|KDO59794.1| hypothetical protein
           CISIN_1g020936mg [Citrus sinensis]
           gi|641840878|gb|KDO59795.1| hypothetical protein
           CISIN_1g020936mg [Citrus sinensis]
          Length = 319

 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 40/61 (65%), Positives = 48/61 (78%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEP+IHINED+M +L+LEEKQSWVESSPTKVFDIDPNT Q
Sbjct: 171 KGIGKDHAKWSPAATV-TFMYEPEIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTGQ 229

Query: 575 V 573
           V
Sbjct: 230 V 230



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 157 LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 190


>gb|EMT28290.1| DNA-directed RNA polymerase II subunit RPB3-A [Aegilops tauschii]
          Length = 192

 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 42/66 (63%), Positives = 50/66 (75%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEPDI IN+++M TLTLEEKQSWVESSPTKVFDIDP TQQ
Sbjct: 48  KGIGKDHAKWSPAATV-TFMYEPDIRINQELMETLTLEEKQSWVESSPTKVFDIDPVTQQ 106

Query: 575 VSHVLP 558
           V+ V P
Sbjct: 107 VTIVDP 112



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 34  LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 67


>gb|EMS46394.1| DNA-directed RNA polymerase II subunit RPB3-A [Triticum urartu]
          Length = 315

 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 43/66 (65%), Positives = 50/66 (75%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEPDI INE++M TLTLEEKQSWVESSPTKVFDIDP TQQ
Sbjct: 171 KGIGKDHAKWSPAATV-TFMYEPDICINEELMETLTLEEKQSWVESSPTKVFDIDPVTQQ 229

Query: 575 VSHVLP 558
           V+ V P
Sbjct: 230 VTVVDP 235



 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 157 LRCGQELRLRAIARKGIGKDHAKWSPAATVTFMY 190


>gb|EMT18475.1| DNA-directed RNA polymerase II subunit RPB3-A [Aegilops tauschii]
          Length = 255

 Score = 79.7 bits (195), Expect = 3e-12
 Identities = 42/64 (65%), Positives = 49/64 (76%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEPDI INE++M TLTLEEKQSWVESSPTKVFDIDP TQQ
Sbjct: 111 KGIGKDHAKWSPAATV-TFMYEPDICINEELMETLTLEEKQSWVESSPTKVFDIDPVTQQ 169

Query: 575 VSHV 564
           V+ V
Sbjct: 170 VTIV 173



 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 97  LRCGQELRLRAIARKGIGKDHAKWSPAATVTFMY 130


>gb|KMZ68215.1| DNA-directed RNA polymerase [Zostera marina]
          Length = 325

 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 40/66 (60%), Positives = 49/66 (74%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEP+IHINE++M TLTL EK +W+ESSPTKVFDIDPNTQQ
Sbjct: 176 KGIGKDHAKWSPAATV-TFMYEPEIHINEELMETLTLTEKLNWIESSPTKVFDIDPNTQQ 234

Query: 575 VSHVLP 558
           V  V P
Sbjct: 235 VVVVDP 240



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 162 LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 195


>gb|KMT01164.1| hypothetical protein BVRB_9g224160 [Beta vulgaris subsp. vulgaris]
          Length = 1101

 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 41/66 (62%), Positives = 50/66 (75%)
 Frame = -3

Query: 755  KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
            KG+GK      P   + + +YEP+I INED+M TLTLE+K++WVESSPTKVFDIDPNTQQ
Sbjct: 954  KGIGKDHAKWSPAATV-TFMYEPEILINEDLMETLTLEQKKAWVESSPTKVFDIDPNTQQ 1012

Query: 575  VSHVLP 558
            V  V P
Sbjct: 1013 VVIVDP 1018



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = -2

Query: 798  LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
            L    EL+LRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 940  LRKGQELKLRAIARKGIGKDHAKWSPAATVTFMY 973


>ref|XP_010691712.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Beta vulgaris subsp. vulgaris]
           gi|731360257|ref|XP_010691713.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 3 [Beta vulgaris
           subsp. vulgaris]
          Length = 318

 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 41/66 (62%), Positives = 50/66 (75%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEP+I INED+M TLTLE+K++WVESSPTKVFDIDPNTQQ
Sbjct: 171 KGIGKDHAKWSPAATV-TFMYEPEILINEDLMETLTLEQKKAWVESSPTKVFDIDPNTQQ 229

Query: 575 VSHVLP 558
           V  V P
Sbjct: 230 VVIVDP 235



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    EL+LRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 157 LRKGQELKLRAIARKGIGKDHAKWSPAATVTFMY 190


>ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Gossypium raimondii] gi|728821384|gb|KHG04309.1|
           DNA-directed RNA polymerase II subunit RPB3-A -like
           protein [Gossypium arboreum] gi|763780305|gb|KJB47376.1|
           hypothetical protein B456_008G023500 [Gossypium
           raimondii]
          Length = 318

 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 42/66 (63%), Positives = 50/66 (75%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEP+IHINED+M +LTLEEK S+VESSPTKVFDIDPNTQQ
Sbjct: 170 KGIGKDHAKWSPAATV-TFMYEPEIHINEDLMESLTLEEKLSFVESSPTKVFDIDPNTQQ 228

Query: 575 VSHVLP 558
           V  V P
Sbjct: 229 VVVVDP 234



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 156 LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 189


>ref|XP_010241296.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Nelumbo nucifera]
          Length = 321

 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 39/66 (59%), Positives = 48/66 (72%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEP+ HINED+M TLTLEEK+ W+ESSPT+VFDIDPNT Q
Sbjct: 173 KGIGKDHAKWSPAATV-TFMYEPEFHINEDLMETLTLEEKRDWIESSPTRVFDIDPNTHQ 231

Query: 575 VSHVLP 558
           V  V P
Sbjct: 232 VVVVDP 237



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 159 LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 192


>ref|XP_009418294.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Musa acuminata subsp. malaccensis]
          Length = 330

 Score = 79.3 bits (194), Expect = 4e-12
 Identities = 39/61 (63%), Positives = 47/61 (77%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEP IHINED+M TLTLE+K+SWVESSPTKVF IDPNTQQ
Sbjct: 186 KGIGKDHAKWSPAATV-TFMYEPQIHINEDLMETLTLEDKRSWVESSPTKVFGIDPNTQQ 244

Query: 575 V 573
           +
Sbjct: 245 L 245



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 172 LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 205


>ref|XP_003607895.1| RPB3 DNA-directed RNA polymerase II subunit 3 [Medicago truncatula]
           gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation
           [Medicago truncatula] gi|355508950|gb|AES90092.1| RPB3
           DNA-directed RNA polymerase II subunit 3 [Medicago
           truncatula]
          Length = 318

 Score = 79.0 bits (193), Expect = 5e-12
 Identities = 40/66 (60%), Positives = 49/66 (74%)
 Frame = -3

Query: 755 KGLGKIMPNGHPRLLLHSCIYEPDIHINEDMMATLTLEEKQSWVESSPTKVFDIDPNTQQ 576
           KG+GK      P   + + +YEPDIHINED+M +LTLEEK+ WV+SSPT+VFDIDP TQQ
Sbjct: 170 KGIGKDHAKWSPAATV-TFMYEPDIHINEDLMESLTLEEKKEWVDSSPTRVFDIDPVTQQ 228

Query: 575 VSHVLP 558
           V  V P
Sbjct: 229 VMVVDP 234



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/34 (85%), Positives = 29/34 (85%)
 Frame = -2

Query: 798 LHLSSELRLRAIARKGIGKDHAKWSPTATVTFMY 697
           L    ELRLRAIARKGIGKDHAKWSP ATVTFMY
Sbjct: 156 LRRGQELRLRAIARKGIGKDHAKWSPAATVTFMY 189