BLASTX nr result
ID: Papaver29_contig00009484
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00009484
(514 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012091573.1| PREDICTED: mediator of RNA polymerase II tra... 77 1e-20
ref|XP_012091574.1| PREDICTED: mediator of RNA polymerase II tra... 77 1e-20
ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm... 71 1e-18
ref|XP_008225051.1| PREDICTED: mediator of RNA polymerase II tra... 74 2e-18
ref|XP_007214550.1| hypothetical protein PRUPE_ppa000947mg [Prun... 74 3e-18
ref|XP_007025672.1| Sensitive to freezing 6 [Theobroma cacao] gi... 70 4e-18
ref|XP_012454340.1| PREDICTED: mediator of RNA polymerase II tra... 70 5e-18
ref|XP_012454343.1| PREDICTED: mediator of RNA polymerase II tra... 70 5e-18
ref|XP_010241989.1| PREDICTED: mediator of RNA polymerase II tra... 72 8e-18
ref|XP_010241990.1| PREDICTED: mediator of RNA polymerase II tra... 72 8e-18
ref|XP_010054346.1| PREDICTED: mediator of RNA polymerase II tra... 68 1e-17
gb|KCW76269.1| hypothetical protein EUGRSUZ_D00642 [Eucalyptus g... 68 1e-17
gb|KCW76268.1| hypothetical protein EUGRSUZ_D00642 [Eucalyptus g... 68 1e-17
gb|KHG23063.1| Putative mediator of RNA polymerase II transcript... 68 2e-17
ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II tra... 72 2e-17
ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citr... 72 2e-17
ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II tra... 72 2e-17
gb|KDO75885.1| hypothetical protein CISIN_1g0008482mg, partial [... 72 2e-17
ref|XP_009596704.1| PREDICTED: mediator of RNA polymerase II tra... 67 3e-17
ref|XP_009596705.1| PREDICTED: mediator of RNA polymerase II tra... 67 3e-17
>ref|XP_012091573.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Jatropha curcas] gi|643703880|gb|KDP20944.1|
hypothetical protein JCGZ_21415 [Jatropha curcas]
Length = 1249
Score = 77.4 bits (189), Expect(3) = 1e-20
Identities = 37/63 (58%), Positives = 43/63 (68%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F +Q S+ S ARWPNFL CSVF S SVQLHWS WP SQN+AT KWF+T
Sbjct: 233 FEEKFLSQQSQTS--------ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNNATPKWFST 284
Query: 242 SNG 234
S G
Sbjct: 285 SKG 287
Score = 46.6 bits (109), Expect(3) = 1e-20
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLVHPLLH 17
G Q AKTS + GVPPSLNPP W+ F A YL + ++ L+ H
Sbjct: 332 GPGFQAIAKTSTSNGVPPSLNPPTWSGFAPLAAYLFSWQEYLISEAKH 379
Score = 22.3 bits (46), Expect(3) = 1e-20
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV 157
++ DAI+T G VPIVN T+V EV
Sbjct: 296 IMAADAIVTDSGAMHVAGVPIVNPSTVVVWEV 327
>ref|XP_012091574.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Jatropha curcas]
Length = 1164
Score = 77.4 bits (189), Expect(3) = 1e-20
Identities = 37/63 (58%), Positives = 43/63 (68%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F +Q S+ S ARWPNFL CSVF S SVQLHWS WP SQN+AT KWF+T
Sbjct: 148 FEEKFLSQQSQTS--------ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNNATPKWFST 199
Query: 242 SNG 234
S G
Sbjct: 200 SKG 202
Score = 46.6 bits (109), Expect(3) = 1e-20
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLVHPLLH 17
G Q AKTS + GVPPSLNPP W+ F A YL + ++ L+ H
Sbjct: 247 GPGFQAIAKTSTSNGVPPSLNPPTWSGFAPLAAYLFSWQEYLISEAKH 294
Score = 22.3 bits (46), Expect(3) = 1e-20
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV 157
++ DAI+T G VPIVN T+V EV
Sbjct: 211 IMAADAIVTDSGAMHVAGVPIVNPSTVVVWEV 242
>ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis]
gi|223541698|gb|EEF43246.1| conserved hypothetical
protein [Ricinus communis]
Length = 1255
Score = 71.2 bits (173), Expect(3) = 1e-18
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F +Q S+ S ARWPNFL CSVF S SVQLHWS WP S+ +AT +WF T
Sbjct: 240 FEEKFLSQQSQTS--------ARWPNFLCVCSVFSSGSVQLHWSQWPPSRTNATPEWFCT 291
Query: 242 SNG 234
S G
Sbjct: 292 SKG 294
Score = 45.8 bits (107), Expect(3) = 1e-18
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q KTSI+ GVPPSLNPP W+ F A YL + ++ L+
Sbjct: 339 GHGFQATPKTSISNGVPPSLNPPNWSGFAPLAAYLFSWQEYLI 381
Score = 22.3 bits (46), Expect(3) = 1e-18
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV 157
++ DAI+T G VPIVN T+V EV
Sbjct: 303 IMAADAIVTDSGAMHVAGVPIVNPSTVVVWEV 334
>ref|XP_008225051.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Prunus mume]
Length = 1243
Score = 73.9 bits (180), Expect(3) = 2e-18
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F +Q S+ S ARWPNFL CSVF S SVQLHWS WP +QNSA KWF T
Sbjct: 228 FEEKFLSQQSQNS--------ARWPNFLCVCSVFSSGSVQLHWSQWPPNQNSAAPKWFQT 279
Query: 242 SNG 234
S G
Sbjct: 280 SKG 282
Score = 41.2 bits (95), Expect(3) = 2e-18
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G QV K S + GVPPSLNPP W F A YL + + L+
Sbjct: 327 GNGFQVTPKISTSNGVPPSLNPPNWAGFSPLAAYLFSWQDYLI 369
Score = 23.5 bits (49), Expect(3) = 2e-18
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 11/40 (27%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV-----NGF 148
++ DAIIT G VPIVN T+V EV NGF
Sbjct: 291 IMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGLGNGF 330
>ref|XP_007214550.1| hypothetical protein PRUPE_ppa000947mg [Prunus persica]
gi|462410415|gb|EMJ15749.1| hypothetical protein
PRUPE_ppa000947mg [Prunus persica]
Length = 953
Score = 73.9 bits (180), Expect(3) = 3e-18
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F +Q S+ S ARWPNFL CSVF S SVQLHWS WP +QNSA KWF T
Sbjct: 228 FEEKFLSQQSQNS--------ARWPNFLCVCSVFSSGSVQLHWSQWPPNQNSAAPKWFQT 279
Query: 242 SNG 234
S G
Sbjct: 280 SKG 282
Score = 40.8 bits (94), Expect(3) = 3e-18
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q+ K S + GVPPSLNPP W F A YL + + L+
Sbjct: 327 GNGFQITPKISTSNGVPPSLNPPNWAGFSPLAAYLFSWQDYLI 369
Score = 23.5 bits (49), Expect(3) = 3e-18
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 11/40 (27%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV-----NGF 148
++ DAIIT G VPIVN T+V EV NGF
Sbjct: 291 IMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGLGNGF 330
>ref|XP_007025672.1| Sensitive to freezing 6 [Theobroma cacao]
gi|508781038|gb|EOY28294.1| Sensitive to freezing 6
[Theobroma cacao]
Length = 1249
Score = 70.1 bits (170), Expect(3) = 4e-18
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F +Q S+ S ARWPNFL CSVF S SVQLHWS WP +Q S KWF T
Sbjct: 238 FEEKFLSQQSQNS--------ARWPNFLCVCSVFSSGSVQLHWSQWPPTQGSTARKWFCT 289
Query: 242 SNG 234
S G
Sbjct: 290 SKG 292
Score = 44.3 bits (103), Expect(3) = 4e-18
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q AKTS + G+PPS+NPP W F A YL + ++ L+
Sbjct: 337 GNGFQATAKTSTSSGIPPSVNPPNWAGFAPLAAYLFSWQEYLI 379
Score = 23.5 bits (49), Expect(3) = 4e-18
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 11/40 (27%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV-----NGF 148
++ DAIIT G VPIVN T+V EV NGF
Sbjct: 301 IMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGF 340
>ref|XP_012454340.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Gossypium raimondii]
gi|823243381|ref|XP_012454341.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 16 isoform X1
[Gossypium raimondii] gi|823243383|ref|XP_012454342.1|
PREDICTED: mediator of RNA polymerase II transcription
subunit 16 isoform X2 [Gossypium raimondii]
gi|763802550|gb|KJB69488.1| hypothetical protein
B456_011G026100 [Gossypium raimondii]
Length = 1248
Score = 70.1 bits (170), Expect(3) = 5e-18
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F +Q S+ S ARWPNFL CSVF S SVQLHWS WP +Q S KWF T
Sbjct: 238 FEEKFLSQQSQNS--------ARWPNFLCVCSVFSSGSVQLHWSQWPPTQGSVARKWFCT 289
Query: 242 SNG 234
S G
Sbjct: 290 SKG 292
Score = 43.9 bits (102), Expect(3) = 5e-18
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q AKTS + G+PPS+NPP W F A YL + ++ L+
Sbjct: 337 GNGFQATAKTSTSNGIPPSVNPPNWAGFAPLAAYLFSWQEYLI 379
Score = 23.5 bits (49), Expect(3) = 5e-18
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 11/40 (27%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV-----NGF 148
++ DAIIT G VPIVN T+V EV NGF
Sbjct: 301 IMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGTGNGF 340
>ref|XP_012454343.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X3 [Gossypium raimondii]
Length = 1025
Score = 70.1 bits (170), Expect(3) = 5e-18
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F +Q S+ S ARWPNFL CSVF S SVQLHWS WP +Q S KWF T
Sbjct: 238 FEEKFLSQQSQNS--------ARWPNFLCVCSVFSSGSVQLHWSQWPPTQGSVARKWFCT 289
Query: 242 SNG 234
S G
Sbjct: 290 SKG 292
Score = 43.9 bits (102), Expect(3) = 5e-18
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q AKTS + G+PPS+NPP W F A YL + ++ L+
Sbjct: 337 GNGFQATAKTSTSNGIPPSVNPPNWAGFAPLAAYLFSWQEYLI 379
Score = 23.5 bits (49), Expect(3) = 5e-18
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 11/40 (27%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV-----NGF 148
++ DAIIT G VPIVN T+V EV NGF
Sbjct: 301 IMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGTGNGF 340
>ref|XP_010241989.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Nelumbo nucifera]
Length = 1231
Score = 71.6 bits (174), Expect(3) = 8e-18
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F +Q + S ARWPNFL CSVF S SVQLHWS WP +Q A SKWF+T
Sbjct: 226 FEEKFLSQQPQTS--------ARWPNFLCVCSVFSSGSVQLHWSQWPPNQTGAASKWFST 277
Query: 242 SNG 234
S G
Sbjct: 278 SKG 280
Score = 42.7 bits (99), Expect(3) = 8e-18
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKL 35
G +Q KT+ T GVPPS+NPP W F A YL + ++ L
Sbjct: 325 GNGIQATPKTTTTNGVPPSVNPPSWAGFAPLAAYLFSWQEYL 366
Score = 22.3 bits (46), Expect(3) = 8e-18
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV 157
++ DAIIT G VPIVN T+V EV
Sbjct: 289 IMAADAIITEAGTMHVAGVPIVNPSTVVVWEV 320
>ref|XP_010241990.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Nelumbo nucifera]
Length = 998
Score = 71.6 bits (174), Expect(3) = 8e-18
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F +Q + S ARWPNFL CSVF S SVQLHWS WP +Q A SKWF+T
Sbjct: 226 FEEKFLSQQPQTS--------ARWPNFLCVCSVFSSGSVQLHWSQWPPNQTGAASKWFST 277
Query: 242 SNG 234
S G
Sbjct: 278 SKG 280
Score = 42.7 bits (99), Expect(3) = 8e-18
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKL 35
G +Q KT+ T GVPPS+NPP W F A YL + ++ L
Sbjct: 325 GNGIQATPKTTTTNGVPPSVNPPSWAGFAPLAAYLFSWQEYL 366
Score = 22.3 bits (46), Expect(3) = 8e-18
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV 157
++ DAIIT G VPIVN T+V EV
Sbjct: 289 IMAADAIITEAGTMHVAGVPIVNPSTVVVWEV 320
>ref|XP_010054346.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Eucalyptus grandis]
Length = 1303
Score = 67.8 bits (164), Expect(3) = 1e-17
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F +Q S+ S ARWPNFL CSVF S SVQL+WS WP SQ+ KWF T
Sbjct: 291 FEEKFLSQQSQTS--------ARWPNFLCVCSVFSSGSVQLNWSQWPPSQSGVAPKWFHT 342
Query: 242 SNG 234
S G
Sbjct: 343 SKG 345
Score = 44.7 bits (104), Expect(3) = 1e-17
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q K S TPGVPPS+NPP W F A YL + ++ L+
Sbjct: 390 GNGFQATPKVSATPGVPPSVNPPNWAGFAPLAAYLFSWQEYLL 432
Score = 23.5 bits (49), Expect(3) = 1e-17
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 11/40 (27%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV-----NGF 148
++ DAIIT G VPIVN T+V EV NGF
Sbjct: 354 IMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGF 393
>gb|KCW76269.1| hypothetical protein EUGRSUZ_D00642 [Eucalyptus grandis]
Length = 1164
Score = 67.8 bits (164), Expect(3) = 1e-17
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F +Q S+ S ARWPNFL CSVF S SVQL+WS WP SQ+ KWF T
Sbjct: 152 FEEKFLSQQSQTS--------ARWPNFLCVCSVFSSGSVQLNWSQWPPSQSGVAPKWFHT 203
Query: 242 SNG 234
S G
Sbjct: 204 SKG 206
Score = 44.7 bits (104), Expect(3) = 1e-17
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q K S TPGVPPS+NPP W F A YL + ++ L+
Sbjct: 251 GNGFQATPKVSATPGVPPSVNPPNWAGFAPLAAYLFSWQEYLL 293
Score = 23.5 bits (49), Expect(3) = 1e-17
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 11/40 (27%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV-----NGF 148
++ DAIIT G VPIVN T+V EV NGF
Sbjct: 215 IMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGF 254
>gb|KCW76268.1| hypothetical protein EUGRSUZ_D00642 [Eucalyptus grandis]
Length = 1153
Score = 67.8 bits (164), Expect(3) = 1e-17
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F +Q S+ S ARWPNFL CSVF S SVQL+WS WP SQ+ KWF T
Sbjct: 152 FEEKFLSQQSQTS--------ARWPNFLCVCSVFSSGSVQLNWSQWPPSQSGVAPKWFHT 203
Query: 242 SNG 234
S G
Sbjct: 204 SKG 206
Score = 44.7 bits (104), Expect(3) = 1e-17
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q K S TPGVPPS+NPP W F A YL + ++ L+
Sbjct: 251 GNGFQATPKVSATPGVPPSVNPPNWAGFAPLAAYLFSWQEYLL 293
Score = 23.5 bits (49), Expect(3) = 1e-17
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 11/40 (27%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV-----NGF 148
++ DAIIT G VPIVN T+V EV NGF
Sbjct: 215 IMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGF 254
>gb|KHG23063.1| Putative mediator of RNA polymerase II transcription subunit 16
[Gossypium arboreum]
Length = 1258
Score = 68.2 bits (165), Expect(3) = 2e-17
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = -3
Query: 422 FRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTT 243
F ++F + S+ S ARWPNFL CSVF S SVQLHWS WP +Q S KWF T
Sbjct: 238 FEEKFLSHQSQNS--------ARWPNFLCVCSVFSSGSVQLHWSQWPPTQGSVARKWFCT 289
Query: 242 SNG 234
S G
Sbjct: 290 SKG 292
Score = 43.9 bits (102), Expect(3) = 2e-17
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q AKTS + G+PPS+NPP W F A YL + ++ L+
Sbjct: 337 GNGFQATAKTSTSNGIPPSVNPPNWAGFAPLAAYLFSWQEYLI 379
Score = 23.5 bits (49), Expect(3) = 2e-17
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 11/40 (27%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV-----NGF 148
++ DAIIT G VPIVN T+V EV NGF
Sbjct: 301 IMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGIGNGF 340
>ref|XP_006467828.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Citrus sinensis]
Length = 1255
Score = 72.0 bits (175), Expect(3) = 2e-17
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = -3
Query: 425 IFRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFT 246
IF ++F +Q S+ S RWPNFL CSVF S SVQL+WS WP SQN A SKWF
Sbjct: 240 IFEEKFLSQNSQTS--------DRWPNFLCVCSVFSSGSVQLNWSQWPPSQNGAASKWFP 291
Query: 245 TSNG 234
T+ G
Sbjct: 292 TAKG 295
Score = 41.6 bits (96), Expect(3) = 2e-17
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q A KT+ + GVPPSL+PP W F A YL + ++ L+
Sbjct: 340 GNGFQAAPKTTTSNGVPPSLSPPKWAGFAPLAAYLFSWQEYLL 382
Score = 21.9 bits (45), Expect(3) = 2e-17
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 5/23 (21%)
Frame = -2
Query: 201 GVPIVNQFTIVS*EV-----NGF 148
GVPIVN T+V EV NGF
Sbjct: 321 GVPIVNPSTVVVWEVTPGPGNGF 343
>ref|XP_006449306.1| hypothetical protein CICLE_v10014062mg [Citrus clementina]
gi|557551917|gb|ESR62546.1| hypothetical protein
CICLE_v10014062mg [Citrus clementina]
Length = 1252
Score = 72.0 bits (175), Expect(3) = 2e-17
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = -3
Query: 425 IFRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFT 246
IF ++F +Q S+ S RWPNFL CSVF S SVQL+WS WP SQN A SKWF
Sbjct: 237 IFEEKFLSQNSQTS--------DRWPNFLCVCSVFSSGSVQLNWSQWPPSQNGAASKWFP 288
Query: 245 TSNG 234
T+ G
Sbjct: 289 TAKG 292
Score = 41.6 bits (96), Expect(3) = 2e-17
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q A KT+ + GVPPSL+PP W F A YL + ++ L+
Sbjct: 337 GNGFQAAPKTTTSNGVPPSLSPPKWAGFAPLAAYLFSWQEYLL 379
Score = 21.9 bits (45), Expect(3) = 2e-17
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 5/23 (21%)
Frame = -2
Query: 201 GVPIVNQFTIVS*EV-----NGF 148
GVPIVN T+V EV NGF
Sbjct: 318 GVPIVNPSTVVVWEVTPGPGNGF 340
>ref|XP_006467829.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Citrus sinensis]
Length = 1057
Score = 72.0 bits (175), Expect(3) = 2e-17
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = -3
Query: 425 IFRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFT 246
IF ++F +Q S+ S RWPNFL CSVF S SVQL+WS WP SQN A SKWF
Sbjct: 42 IFEEKFLSQNSQTS--------DRWPNFLCVCSVFSSGSVQLNWSQWPPSQNGAASKWFP 93
Query: 245 TSNG 234
T+ G
Sbjct: 94 TAKG 97
Score = 41.6 bits (96), Expect(3) = 2e-17
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q A KT+ + GVPPSL+PP W F A YL + ++ L+
Sbjct: 142 GNGFQAAPKTTTSNGVPPSLSPPKWAGFAPLAAYLFSWQEYLL 184
Score = 21.9 bits (45), Expect(3) = 2e-17
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 5/23 (21%)
Frame = -2
Query: 201 GVPIVNQFTIVS*EV-----NGF 148
GVPIVN T+V EV NGF
Sbjct: 123 GVPIVNPSTVVVWEVTPGPGNGF 145
>gb|KDO75885.1| hypothetical protein CISIN_1g0008482mg, partial [Citrus sinensis]
gi|641857120|gb|KDO75886.1| hypothetical protein
CISIN_1g0008482mg, partial [Citrus sinensis]
gi|641857121|gb|KDO75887.1| hypothetical protein
CISIN_1g0008482mg, partial [Citrus sinensis]
gi|641857122|gb|KDO75888.1| hypothetical protein
CISIN_1g0008482mg, partial [Citrus sinensis]
gi|641857123|gb|KDO75889.1| hypothetical protein
CISIN_1g0008482mg, partial [Citrus sinensis]
Length = 452
Score = 72.0 bits (175), Expect(3) = 2e-17
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = -3
Query: 425 IFRDEFQAQTSKAS**ALIVIQARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFT 246
IF ++F +Q S+ S RWPNFL CSVF S SVQL+WS WP SQN A SKWF
Sbjct: 240 IFEEKFLSQNSQTS--------DRWPNFLCVCSVFSSGSVQLNWSQWPPSQNGAASKWFP 291
Query: 245 TSNG 234
T+ G
Sbjct: 292 TAKG 295
Score = 41.6 bits (96), Expect(3) = 2e-17
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q A KT+ + GVPPSL+PP W F A YL + ++ L+
Sbjct: 340 GNGFQAAPKTTTSNGVPPSLSPPKWAGFAPLAAYLFSWQEYLL 382
Score = 21.9 bits (45), Expect(3) = 2e-17
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 5/23 (21%)
Frame = -2
Query: 201 GVPIVNQFTIVS*EV-----NGF 148
GVPIVN T+V EV NGF
Sbjct: 321 GVPIVNPSTVVVWEVTPGPGNGF 343
>ref|XP_009596704.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Nicotiana tomentosiformis]
Length = 1247
Score = 67.4 bits (163), Expect(3) = 3e-17
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = -3
Query: 359 ARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTTSNG 234
A WPNFL CSVF S SVQLHWS WP +QN SKWF TS G
Sbjct: 258 AGWPNFLCVCSVFSSGSVQLHWSQWPPNQNGTPSKWFCTSKG 299
Score = 43.9 bits (102), Expect(3) = 3e-17
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q KTS++ G+PPSLNPP W F A YL + ++ L+
Sbjct: 344 GNGFQATPKTSVSNGIPPSLNPPSWDGFAPLAAYLFSWQEYLL 386
Score = 23.5 bits (49), Expect(3) = 3e-17
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 11/40 (27%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV-----NGF 148
++ DAIIT G VPIVN T+V EV NGF
Sbjct: 308 IMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGF 347
>ref|XP_009596705.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Nicotiana tomentosiformis]
Length = 1043
Score = 67.4 bits (163), Expect(3) = 3e-17
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = -3
Query: 359 ARWPNFLYACSVFLSSSVQLHWSWWPLSQNSATSKWFTTSNG 234
A WPNFL CSVF S SVQLHWS WP +QN SKWF TS G
Sbjct: 54 AGWPNFLCVCSVFSSGSVQLHWSQWPPNQNGTPSKWFCTSKG 95
Score = 43.9 bits (102), Expect(3) = 3e-17
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = -1
Query: 160 GQWLQVAAKTSITPGVPPSLNPPPWTWFVH*AVYLLALEKKLV 32
G Q KTS++ G+PPSLNPP W F A YL + ++ L+
Sbjct: 140 GNGFQATPKTSVSNGIPPSLNPPSWDGFAPLAAYLFSWQEYLL 182
Score = 23.5 bits (49), Expect(3) = 3e-17
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 11/40 (27%)
Frame = -2
Query: 234 LLDVDAIIT*EG------VPIVNQFTIVS*EV-----NGF 148
++ DAIIT G VPIVN T+V EV NGF
Sbjct: 104 IMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGF 143