BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00008920
         (868 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KMZ74766.1| ATP-dependent RNA helicase [Zostera marina]            231   4e-67
emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]   223   4e-66
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   223   4e-66
ref|XP_010245402.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   231   4e-66
ref|XP_010551750.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   220   7e-64
ref|XP_010546798.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   213   7e-64
ref|XP_008246347.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   221   4e-63
ref|XP_007208352.1| hypothetical protein PRUPE_ppa001778mg [Prun...   221   4e-63
ref|XP_010094933.1| DEAD-box ATP-dependent RNA helicase 3 [Morus...   217   6e-63
ref|XP_002874312.1| RNA helicase [Arabidopsis lyrata subsp. lyra...   213   6e-63
ref|XP_010932029.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   215   1e-62
ref|XP_008777792.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   214   2e-62
ref|XP_006382234.1| hypothetical protein POPTR_0005s00200g [Popu...   220   3e-62
ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Popu...   220   3e-62
ref|XP_009381386.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   213   3e-62
ref|XP_009381394.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   213   3e-62
ref|NP_001031943.1| DEAD-box ATP-dependent RNA helicase 3 [Arabi...   213   3e-62
gb|AAM91087.1| At5g26740 [Arabidopsis thaliana]                       213   3e-62
emb|CAA09196.1| RNA helicase [Arabidopsis thaliana]                   213   3e-62
ref|NP_680225.2| DEAD-box ATP-dependent RNA helicase 3 [Arabidop...   213   3e-62

>gb|KMZ74766.1| ATP-dependent RNA helicase [Zostera marina]
          Length = 783

 Score =  231 bits (589), Expect(2) = 4e-67
 Identities = 119/135 (88%), Positives = 125/135 (92%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           + +RAKTGTGKTLAFGIPIIKRLTVD EGR I RRSGR PRFLVLAPTRELA QVEKEI+
Sbjct: 144 LIARAKTGTGKTLAFGIPIIKRLTVDHEGREISRRSGRHPRFLVLAPTRELAKQVEKEIK 203

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSY+ QQNALSRGVDVVVGTPGRIIDLV GNSL+L EVEYLVLDEA
Sbjct: 204 ESAPYLSTVCVYGGVSYSIQQNALSRGVDVVVGTPGRIIDLVNGNSLQLGEVEYLVLDEA 263

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEEDVE I
Sbjct: 264 DQMLAVGFEEDVEVI 278



 Score = 52.4 bits (124), Expect(2) = 4e-67
 Identities = 37/90 (41%), Positives = 43/90 (47%)
 Frame = -2

Query: 666 VPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXXXXXXXXXXXXXXXXXXX 487
           V  AIAT +S+LSEEAFK               +   E                      
Sbjct: 49  VVSAIATSSSMLSEEAFKGVVGGFGKEDVESDYESEDE---------FDNEIDDGVVEEA 99

Query: 486 DGDVLALDNLGLPTPLVEALEKRGITHLFP 397
             DVLA+DNLGLP PLVE+L+KRGIT LFP
Sbjct: 100 SEDVLAIDNLGLPKPLVESLQKRGITDLFP 129


>emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]
          Length = 786

 Score =  223 bits (569), Expect(2) = 4e-66
 Identities = 115/135 (85%), Positives = 123/135 (91%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           + +RAKTGTGKTLAFGIPIIKRL+ DDE R   RRSGRLPR LVLAPTRELA QVEKEI+
Sbjct: 156 LIARAKTGTGKTLAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIK 215

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSY +QQNALSRGVDVVVGTPGRIIDL+KGNSLKL EV+ LVLDEA
Sbjct: 216 ESAPYLSTVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLIKGNSLKLGEVQNLVLDEA 275

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEEDVE I
Sbjct: 276 DQMLAVGFEEDVEVI 290



 Score = 56.6 bits (135), Expect(2) = 4e-66
 Identities = 43/104 (41%), Positives = 48/104 (46%)
 Frame = -2

Query: 708 VRRSCKQKLRIKHTVPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXXXXX 529
           +RRS KQ +     VP AIATPNSVLSEEAFK                   +        
Sbjct: 54  LRRSFKQGISF---VPSAIATPNSVLSEEAFKGLGGFS-------------KDPLDVTDT 97

Query: 528 XXXXXXXXXXXXXXDGDVLALDNLGLPTPLVEALEKRGITHLFP 397
                           D LAL  LGLP  LVE+LE+RGITHLFP
Sbjct: 98  DDDYDPEIEASAAAQEDELALAQLGLPPRLVESLEQRGITHLFP 141


>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
           protein product [Vitis vinifera]
          Length = 764

 Score =  223 bits (569), Expect(2) = 4e-66
 Identities = 115/135 (85%), Positives = 123/135 (91%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           + +RAKTGTGKTLAFGIPIIKRL+ DDE R   RRSGRLPR LVLAPTRELA QVEKEI+
Sbjct: 156 LIARAKTGTGKTLAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIK 215

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSY +QQNALSRGVDVVVGTPGRIIDL+KGNSLKL EV+ LVLDEA
Sbjct: 216 ESAPYLSTVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLIKGNSLKLGEVQNLVLDEA 275

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEEDVE I
Sbjct: 276 DQMLAVGFEEDVEVI 290



 Score = 56.6 bits (135), Expect(2) = 4e-66
 Identities = 43/104 (41%), Positives = 48/104 (46%)
 Frame = -2

Query: 708 VRRSCKQKLRIKHTVPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXXXXX 529
           +RRS KQ +     VP AIATPNSVLSEEAFK                   +        
Sbjct: 54  LRRSFKQGISF---VPSAIATPNSVLSEEAFKGLGGFS-------------KDPLDVTDT 97

Query: 528 XXXXXXXXXXXXXXDGDVLALDNLGLPTPLVEALEKRGITHLFP 397
                           D LAL  LGLP  LVE+LE+RGITHLFP
Sbjct: 98  DDDYDPEIEASAAAQEDELALAQLGLPPRLVESLEQRGITHLFP 141


>ref|XP_010245402.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Nelumbo nucifera]
          Length = 761

 Score =  231 bits (589), Expect(2) = 4e-66
 Identities = 117/135 (86%), Positives = 125/135 (92%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           + +RAKTGTGKTLAFGIPIIKR+TVDDEGR++ RRSG LPR LVLAPTRELA QVEKEI+
Sbjct: 157 LIARAKTGTGKTLAFGIPIIKRITVDDEGRSLSRRSGCLPRVLVLAPTRELAKQVEKEIK 216

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYLNTVCVYGGVSY SQQNALSRGVDVVVGTPGRIIDL+  NSLKL EV+YLVLDEA
Sbjct: 217 ESAPYLNTVCVYGGVSYNSQQNALSRGVDVVVGTPGRIIDLINSNSLKLGEVQYLVLDEA 276

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEEDVE I
Sbjct: 277 DQMLAVGFEEDVEII 291



 Score = 48.9 bits (115), Expect(2) = 4e-66
 Identities = 38/97 (39%), Positives = 44/97 (45%)
 Frame = -2

Query: 687 KLRIKHTVPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXXXXXXXXXXXX 508
           + R    VP AI TPNSVLSEEAFK               + V                 
Sbjct: 56  RTRTLMVVPSAIFTPNSVLSEEAFKGISSGLSKRSIEEKDNDVKYD---------SETDG 106

Query: 507 XXXXXXXDGDVLALDNLGLPTPLVEALEKRGITHLFP 397
                  +GD LA+ NL LP  LV++L KRGITHLFP
Sbjct: 107 SGAEEGAEGD-LAIANLDLPQQLVDSLAKRGITHLFP 142


>ref|XP_010551750.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Tarenaya hassleriana]
          Length = 756

 Score =  220 bits (560), Expect(2) = 7e-64
 Identities = 113/135 (83%), Positives = 123/135 (91%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           I +RAKTGTGKTLAFGIPIIKRLT D   ++  RRSGRLP+ LVLAPTRELA QVEKEI+
Sbjct: 148 IIARAKTGTGKTLAFGIPIIKRLTEDAVDQSSFRRSGRLPKVLVLAPTRELAKQVEKEIK 207

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSY +QQ+ALSRGVDVVVGTPGRIIDL++G SLKL EVEYLVLDEA
Sbjct: 208 ESAPYLSTVCVYGGVSYNTQQSALSRGVDVVVGTPGRIIDLIEGKSLKLGEVEYLVLDEA 267

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEEDVECI
Sbjct: 268 DQMLAVGFEEDVECI 282



 Score = 52.8 bits (125), Expect(2) = 7e-64
 Identities = 34/90 (37%), Positives = 40/90 (44%)
 Frame = -2

Query: 666 VPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXXXXXXXXXXXXXXXXXXX 487
           +P A+ATPNSV SEEAFK                 V +                      
Sbjct: 62  IPSAVATPNSVFSEEAFKGLGLSDDDHDHDENGLDVDDD------------------SGT 103

Query: 486 DGDVLALDNLGLPTPLVEALEKRGITHLFP 397
             D LA+  LGLP  L ++LEKRGITHLFP
Sbjct: 104 SSDELAVSQLGLPERLADSLEKRGITHLFP 133


>ref|XP_010546798.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Tarenaya hassleriana]
          Length = 739

 Score =  213 bits (542), Expect(2) = 7e-64
 Identities = 111/135 (82%), Positives = 120/135 (88%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           I +RAKTGTGKTLAFGIPIIKRLT D    +  RRSGRLP+ LVLAPTRELA QVEKEI+
Sbjct: 138 IIARAKTGTGKTLAFGIPIIKRLTEDAVDHSSFRRSGRLPKLLVLAPTRELAKQVEKEIK 197

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSY +QQ+ALSRGVDVVVGTPGRIIDL++G SLKL EVEYLVLDEA
Sbjct: 198 ESAPYLSTVCVYGGVSYNTQQSALSRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEA 257

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEE VE I
Sbjct: 258 DQMLAVGFEEAVESI 272



 Score = 59.7 bits (143), Expect(2) = 7e-64
 Identities = 40/104 (38%), Positives = 46/104 (44%)
 Frame = -2

Query: 708 VRRSCKQKLRIKHTVPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXXXXX 529
           +RR C   L     +P A+ATPNSVLSEEAFK                 VP         
Sbjct: 44  LRRPCVS-LSSSSVIPSAVATPNSVLSEEAFKGLGLSDDENALDEENGAVPSS------- 95

Query: 528 XXXXXXXXXXXXXXDGDVLALDNLGLPTPLVEALEKRGITHLFP 397
                           D LA+  LGLP  L ++LEKRGITHLFP
Sbjct: 96  ----------------DELAISKLGLPERLADSLEKRGITHLFP 123


>ref|XP_008246347.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Prunus mume]
          Length = 768

 Score =  221 bits (562), Expect(2) = 4e-63
 Identities = 113/135 (83%), Positives = 122/135 (90%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           I +RAKTGTGKTLAFGIPI+KRLT DDE R+  RR+G LPR LVLAPTRELA QVEKEI+
Sbjct: 155 IIARAKTGTGKTLAFGIPILKRLTEDDEQRSSHRRTGYLPRVLVLAPTRELAKQVEKEIK 214

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYLNTVCVYGGVSY +QQ+ALSRGVDVVVGTPGRIIDL+ GNSLKL EV+YLVLDEA
Sbjct: 215 ESAPYLNTVCVYGGVSYITQQSALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEA 274

Query: 47  DQMLAVGFEEDVECI 3
           D MLAVGFEEDVE I
Sbjct: 275 DSMLAVGFEEDVEVI 289



 Score = 49.3 bits (116), Expect(2) = 4e-63
 Identities = 40/109 (36%), Positives = 47/109 (43%)
 Frame = -2

Query: 723 PFLSLVRRSCKQKLRIKHTVPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLY 544
           P  + V R+    +R    V  AIATPNSVLSEEAFK                    +  
Sbjct: 47  PHFNSVLRAKSGLVRQSSLVASAIATPNSVLSEEAFKGLGGFSKDSLDSDSEYDSETE-- 104

Query: 543 XXXXXXXXXXXXXXXXXXXDGDVLALDNLGLPTPLVEALEKRGITHLFP 397
                              D D LAL  LGLP  LV++LEKRGI+ LFP
Sbjct: 105 -------------PASAASDDDELALSKLGLPQRLVDSLEKRGISSLFP 140


>ref|XP_007208352.1| hypothetical protein PRUPE_ppa001778mg [Prunus persica]
           gi|462403994|gb|EMJ09551.1| hypothetical protein
           PRUPE_ppa001778mg [Prunus persica]
          Length = 766

 Score =  221 bits (562), Expect(2) = 4e-63
 Identities = 113/135 (83%), Positives = 122/135 (90%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           I +RAKTGTGKTLAFGIPI+KRLT DDE R+  RR+G LPR LVLAPTRELA QVEKEI+
Sbjct: 155 IIARAKTGTGKTLAFGIPILKRLTEDDEQRSSHRRTGYLPRVLVLAPTRELAKQVEKEIK 214

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYLNTVCVYGGVSY +QQ+ALSRGVDVVVGTPGRIIDL+ GNSLKL EV+YLVLDEA
Sbjct: 215 ESAPYLNTVCVYGGVSYITQQSALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEA 274

Query: 47  DQMLAVGFEEDVECI 3
           D MLAVGFEEDVE I
Sbjct: 275 DSMLAVGFEEDVEVI 289



 Score = 49.3 bits (116), Expect(2) = 4e-63
 Identities = 40/109 (36%), Positives = 47/109 (43%)
 Frame = -2

Query: 723 PFLSLVRRSCKQKLRIKHTVPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLY 544
           P  + V R+    +R    V  AIATPNSVLSEEAFK                    +  
Sbjct: 47  PHFNSVLRAKSGLVRQSSLVASAIATPNSVLSEEAFKGLGGFSKDSLDSDSEYDSETE-- 104

Query: 543 XXXXXXXXXXXXXXXXXXXDGDVLALDNLGLPTPLVEALEKRGITHLFP 397
                              D D LAL  LGLP  LV++LEKRGI+ LFP
Sbjct: 105 -------------PASAAGDDDELALSKLGLPQRLVDSLEKRGISSLFP 140


>ref|XP_010094933.1| DEAD-box ATP-dependent RNA helicase 3 [Morus notabilis]
           gi|587868209|gb|EXB57576.1| DEAD-box ATP-dependent RNA
           helicase 3 [Morus notabilis]
          Length = 810

 Score =  217 bits (553), Expect(2) = 6e-63
 Identities = 111/135 (82%), Positives = 121/135 (89%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           + +RAKTGTGKTLAFGIPIIKRLT DDE R   RRS RLP+ LVLAPTRELA QVEKEI+
Sbjct: 150 LIARAKTGTGKTLAFGIPIIKRLTEDDEQRGSRRRSSRLPKGLVLAPTRELAKQVEKEIK 209

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAP+LNTVCVYGGVSY +QQNALSRGVDVVVGTPGR+IDL+ G SL+L EV+YLVLDEA
Sbjct: 210 ESAPHLNTVCVYGGVSYITQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVQYLVLDEA 269

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEEDVE I
Sbjct: 270 DQMLAVGFEEDVEVI 284



 Score = 52.4 bits (124), Expect(2) = 6e-63
 Identities = 37/90 (41%), Positives = 41/90 (45%)
 Frame = -2

Query: 666 VPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXXXXXXXXXXXXXXXXXXX 487
           V  AIATPNSVLSEEAFK                   +                      
Sbjct: 58  VASAIATPNSVLSEEAFKGLGDFSK------------DSFSGDEEDDYESEEGEPGEASV 105

Query: 486 DGDVLALDNLGLPTPLVEALEKRGITHLFP 397
           D D LA+  LGLP  LV++LEKRGITHLFP
Sbjct: 106 DDDELAISKLGLPQRLVDSLEKRGITHLFP 135


>ref|XP_002874312.1| RNA helicase [Arabidopsis lyrata subsp. lyrata]
           gi|297320149|gb|EFH50571.1| RNA helicase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 748

 Score =  213 bits (542), Expect(2) = 6e-63
 Identities = 111/135 (82%), Positives = 121/135 (89%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           I +RAKTGTGKTLAFGIPIIKRLT +    +  RRSGRLP+FLVLAPTRELA QVEKEI+
Sbjct: 142 IIARAKTGTGKTLAFGIPIIKRLTEEAGDYSAFRRSGRLPKFLVLAPTRELAKQVEKEIK 201

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSYT QQ+AL+RGVDVVVGTPGRIIDL++G SLKL EVEYLVLDEA
Sbjct: 202 ESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEA 261

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEE VE I
Sbjct: 262 DQMLAVGFEEAVESI 276



 Score = 56.6 bits (135), Expect(2) = 6e-63
 Identities = 45/114 (39%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
 Frame = -2

Query: 726 TPFLSLVRRSCKQKLRIKHT----VPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVV 559
           TP +SL RR+     R+ H+    VP A+ATPNSVLSEEAFK               + V
Sbjct: 40  TPPISLARRT-----RLIHSSSLLVPSAVATPNSVLSEEAFKSLGLSDHDEYDLDGDNNV 94

Query: 558 PEQLYXXXXXXXXXXXXXXXXXXXDGDVLALDNLGLPTPLVEALEKRGITHLFP 397
                                   DG+ LA+  L LP  L E+LEKRGITHLFP
Sbjct: 95  VAD---------------------DGEELAISKLSLPQRLEESLEKRGITHLFP 127


>ref|XP_010932029.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           3, chloroplastic [Elaeis guineensis]
          Length = 761

 Score =  215 bits (547), Expect(2) = 1e-62
 Identities = 112/135 (82%), Positives = 120/135 (88%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           + +RAKTGTGKTLAFGIPIIKRLT D++ R I RR GRLPR LVLAPTRELA QVEKEI+
Sbjct: 163 LIARAKTGTGKTLAFGIPIIKRLTEDNDDRRISRR-GRLPRVLVLAPTRELAKQVEKEIK 221

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL TVCVYGGVSY  QQNAL+RGVDVVVGTPGRIIDL+  NSL+L EVEYLVLDEA
Sbjct: 222 ESAPYLGTVCVYGGVSYNIQQNALARGVDVVVGTPGRIIDLINSNSLQLGEVEYLVLDEA 281

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEEDVE I
Sbjct: 282 DQMLAVGFEEDVEVI 296



 Score = 53.5 bits (127), Expect(2) = 1e-62
 Identities = 37/90 (41%), Positives = 43/90 (47%)
 Frame = -2

Query: 666 VPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXXXXXXXXXXXXXXXXXXX 487
           VP A+A+PNSVLSEEAFK               +   E+ Y                   
Sbjct: 65  VPSAVASPNSVLSEEAFKGLGDFSKSSLDGEEGE---EEYYGSEEEEEEDAEGSTVGSE- 120

Query: 486 DGDVLALDNLGLPTPLVEALEKRGITHLFP 397
             + LA+ NLGLP  LV  LEKRGITHLFP
Sbjct: 121 --EELAIANLGLPEQLVSTLEKRGITHLFP 148


>ref|XP_008777792.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Phoenix dactylifera]
          Length = 759

 Score =  214 bits (546), Expect(2) = 2e-62
 Identities = 108/135 (80%), Positives = 119/135 (88%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           + +RAKTGTGKTLAFGIPIIKRLT D+EGR I  + GRLPR LVLAPTRELA QVEKEI+
Sbjct: 162 LIARAKTGTGKTLAFGIPIIKRLTEDNEGRRISSKRGRLPRVLVLAPTRELAKQVEKEIK 221

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL TVCVYGGVSY  QQN L+RGVDVVVGTPGRIIDL+  NSL+L E++YLVLDEA
Sbjct: 222 ESAPYLGTVCVYGGVSYNIQQNTLARGVDVVVGTPGRIIDLIDSNSLQLGEIQYLVLDEA 281

Query: 47  DQMLAVGFEEDVECI 3
           D+MLAVGFEEDVE I
Sbjct: 282 DRMLAVGFEEDVEVI 296



 Score = 53.1 bits (126), Expect(2) = 2e-62
 Identities = 37/90 (41%), Positives = 44/90 (48%)
 Frame = -2

Query: 666 VPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXXXXXXXXXXXXXXXXXXX 487
           VP A+A+PNSVLSEEAFK               +   E+ Y                   
Sbjct: 65  VPLAVASPNSVLSEEAFKGLGDFSKSSLDGEEGE---EEYYGSEEEEEEAEGSTVGSK-- 119

Query: 486 DGDVLALDNLGLPTPLVEALEKRGITHLFP 397
             + LA+ NLGLP  LV ALE+RGITHLFP
Sbjct: 120 --EELAIANLGLPERLVSALEERGITHLFP 147


>ref|XP_006382234.1| hypothetical protein POPTR_0005s00200g [Populus trichocarpa]
           gi|550337585|gb|ERP60031.1| hypothetical protein
           POPTR_0005s00200g [Populus trichocarpa]
          Length = 774

 Score =  220 bits (560), Expect(2) = 3e-62
 Identities = 113/135 (83%), Positives = 122/135 (90%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           + +RAKTGTGKTLAFGIPIIKRLT D E R   RR+GRLP+ LVLAPTRELA QVEKEI+
Sbjct: 175 LIARAKTGTGKTLAFGIPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAKQVEKEIK 234

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSY +QQNALSRGVDVVVGTPGRIIDL+KGNSLKL EVEYLVLDEA
Sbjct: 235 ESAPYLSTVCVYGGVSYATQQNALSRGVDVVVGTPGRIIDLLKGNSLKLGEVEYLVLDEA 294

Query: 47  DQMLAVGFEEDVECI 3
           DQML+ GFEEDVE I
Sbjct: 295 DQMLSFGFEEDVEVI 309



 Score = 47.4 bits (111), Expect(2) = 3e-62
 Identities = 34/91 (37%), Positives = 38/91 (41%)
 Frame = -2

Query: 669 TVPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXXXXXXXXXXXXXXXXXX 490
           T P AIATPN +LSEEAFK               D V                       
Sbjct: 81  TPPSAIATPNPILSEEAFKGLDGFSDFEADADTDDAVDYD-----------SSETEPNSN 129

Query: 489 XDGDVLALDNLGLPTPLVEALEKRGITHLFP 397
              D L +  LGLP  LV+ L+ RGITHLFP
Sbjct: 130 TSEDELDISKLGLPQRLVQTLQNRGITHLFP 160


>ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Populus trichocarpa]
           gi|550337584|gb|ERP60030.1| hypothetical protein
           POPTR_0005s00200g [Populus trichocarpa]
          Length = 773

 Score =  220 bits (560), Expect(2) = 3e-62
 Identities = 113/135 (83%), Positives = 122/135 (90%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           + +RAKTGTGKTLAFGIPIIKRLT D E R   RR+GRLP+ LVLAPTRELA QVEKEI+
Sbjct: 175 LIARAKTGTGKTLAFGIPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAKQVEKEIK 234

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSY +QQNALSRGVDVVVGTPGRIIDL+KGNSLKL EVEYLVLDEA
Sbjct: 235 ESAPYLSTVCVYGGVSYATQQNALSRGVDVVVGTPGRIIDLLKGNSLKLGEVEYLVLDEA 294

Query: 47  DQMLAVGFEEDVECI 3
           DQML+ GFEEDVE I
Sbjct: 295 DQMLSFGFEEDVEVI 309



 Score = 47.4 bits (111), Expect(2) = 3e-62
 Identities = 34/91 (37%), Positives = 38/91 (41%)
 Frame = -2

Query: 669 TVPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXXXXXXXXXXXXXXXXXX 490
           T P AIATPN +LSEEAFK               D V                       
Sbjct: 81  TPPSAIATPNPILSEEAFKGLDGFSDFEADADTDDAVDYD-----------SSETEPNSN 129

Query: 489 XDGDVLALDNLGLPTPLVEALEKRGITHLFP 397
              D L +  LGLP  LV+ L+ RGITHLFP
Sbjct: 130 TSEDELDISKLGLPQRLVQTLQNRGITHLFP 160


>ref|XP_009381386.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 769

 Score =  213 bits (543), Expect(2) = 3e-62
 Identities = 110/135 (81%), Positives = 120/135 (88%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           I +RAKTGTGKTLAFGIPIIKRL+  DEGR   R+ GRLPR LVLAPTRELA QVEKEI+
Sbjct: 154 IIARAKTGTGKTLAFGIPIIKRLSEGDEGRRKSRQLGRLPRALVLAPTRELARQVEKEIK 213

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSY  Q+NALSRGVDVVVGTPGRIIDL+  NSL+L EV++LVLDEA
Sbjct: 214 ESAPYLSTVCVYGGVSYNIQKNALSRGVDVVVGTPGRIIDLINDNSLRLGEVQFLVLDEA 273

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEEDVE I
Sbjct: 274 DQMLAVGFEEDVEVI 288



 Score = 53.9 bits (128), Expect(2) = 3e-62
 Identities = 36/90 (40%), Positives = 41/90 (45%)
 Frame = -2

Query: 666 VPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXXXXXXXXXXXXXXXXXXX 487
           VP A+A+PNSVLSEEAFK               +      Y                   
Sbjct: 53  VPSAVASPNSVLSEEAFKGFRGLSKSPLEQGEEEEYGSDAYNSEEEEEGSSSAAAGQDK- 111

Query: 486 DGDVLALDNLGLPTPLVEALEKRGITHLFP 397
             D LA+ NL LP  LV +LEKRGITHLFP
Sbjct: 112 --DELAITNLDLPQQLVSSLEKRGITHLFP 139


>ref|XP_009381394.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 754

 Score =  213 bits (543), Expect(2) = 3e-62
 Identities = 110/135 (81%), Positives = 120/135 (88%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           I +RAKTGTGKTLAFGIPIIKRL+  DEGR   R+ GRLPR LVLAPTRELA QVEKEI+
Sbjct: 154 IIARAKTGTGKTLAFGIPIIKRLSEGDEGRRKSRQLGRLPRALVLAPTRELARQVEKEIK 213

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSY  Q+NALSRGVDVVVGTPGRIIDL+  NSL+L EV++LVLDEA
Sbjct: 214 ESAPYLSTVCVYGGVSYNIQKNALSRGVDVVVGTPGRIIDLINDNSLRLGEVQFLVLDEA 273

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEEDVE I
Sbjct: 274 DQMLAVGFEEDVEVI 288



 Score = 53.9 bits (128), Expect(2) = 3e-62
 Identities = 36/90 (40%), Positives = 41/90 (45%)
 Frame = -2

Query: 666 VPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXXXXXXXXXXXXXXXXXXX 487
           VP A+A+PNSVLSEEAFK               +      Y                   
Sbjct: 53  VPSAVASPNSVLSEEAFKGFRGLSKSPLEQGEEEEYGSDAYNSEEEEEGSSSAAAGQDK- 111

Query: 486 DGDVLALDNLGLPTPLVEALEKRGITHLFP 397
             D LA+ NL LP  LV +LEKRGITHLFP
Sbjct: 112 --DELAITNLDLPQQLVSSLEKRGITHLFP 139


>ref|NP_001031943.1| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana]
           gi|108861893|sp|Q8L7S8.2|RH3_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE
           1138; Flags: Precursor gi|19347898|gb|AAL85971.1|
           unknown protein [Arabidopsis thaliana]
           gi|20259537|gb|AAM13888.1| unknown protein [Arabidopsis
           thaliana] gi|20453225|gb|AAM19851.1| At5g26752
           [Arabidopsis thaliana] gi|21689779|gb|AAM67533.1|
           unknown protein [Arabidopsis thaliana]
           gi|23397145|gb|AAN31856.1| unknown protein [Arabidopsis
           thaliana] gi|25090432|gb|AAN72300.1| At5g26752/At5g26752
           [Arabidopsis thaliana] gi|27311701|gb|AAO00816.1|
           Unknown protein [Arabidopsis thaliana]
           gi|110739485|dbj|BAF01652.1| hypothetical protein
           [Arabidopsis thaliana] gi|332006182|gb|AED93565.1|
           DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis
           thaliana]
          Length = 748

 Score =  213 bits (541), Expect(2) = 3e-62
 Identities = 111/135 (82%), Positives = 120/135 (88%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           I +RAKTGTGKTLAFGIPIIKRLT +       RRSGRLP+FLVLAPTRELA QVEKEI+
Sbjct: 142 IIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIK 201

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSYT QQ+AL+RGVDVVVGTPGRIIDL++G SLKL EVEYLVLDEA
Sbjct: 202 ESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEA 261

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEE VE I
Sbjct: 262 DQMLAVGFEEAVESI 276



 Score = 54.7 bits (130), Expect(2) = 3e-62
 Identities = 43/107 (40%), Positives = 50/107 (46%)
 Frame = -2

Query: 717 LSLVRRSCKQKLRIKHTVPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXX 538
           LSLVRR+ ++       VP A+ATPNSVLSEEAFK                     L   
Sbjct: 42  LSLVRRT-RRIHSSSLLVPSAVATPNSVLSEEAFK--------------------SLGLS 80

Query: 537 XXXXXXXXXXXXXXXXXDGDVLALDNLGLPTPLVEALEKRGITHLFP 397
                            DG+ LA+  L LP  L E+LEKRGITHLFP
Sbjct: 81  DHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFP 127


>gb|AAM91087.1| At5g26740 [Arabidopsis thaliana]
          Length = 748

 Score =  213 bits (541), Expect(2) = 3e-62
 Identities = 111/135 (82%), Positives = 120/135 (88%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           I +RAKTGTGKTLAFGIPIIKRLT +       RRSGRLP+FLVLAPTRELA QVEKEI+
Sbjct: 142 IIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIK 201

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSYT QQ+AL+RGVDVVVGTPGRIIDL++G SLKL EVEYLVLDEA
Sbjct: 202 ESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEA 261

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEE VE I
Sbjct: 262 DQMLAVGFEEAVESI 276



 Score = 54.7 bits (130), Expect(2) = 3e-62
 Identities = 43/107 (40%), Positives = 50/107 (46%)
 Frame = -2

Query: 717 LSLVRRSCKQKLRIKHTVPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXX 538
           LSLVRR+ ++       VP A+ATPNSVLSEEAFK                     L   
Sbjct: 42  LSLVRRT-RRIHSSSLLVPSAVATPNSVLSEEAFK--------------------SLGLS 80

Query: 537 XXXXXXXXXXXXXXXXXDGDVLALDNLGLPTPLVEALEKRGITHLFP 397
                            DG+ LA+  L LP  L E+LEKRGITHLFP
Sbjct: 81  DHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFP 127


>emb|CAA09196.1| RNA helicase [Arabidopsis thaliana]
          Length = 748

 Score =  213 bits (541), Expect(2) = 3e-62
 Identities = 111/135 (82%), Positives = 120/135 (88%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           I +RAKTGTGKTLAFGIPIIKRLT +       RRSGRLP+FLVLAPTRELA QVEKEI+
Sbjct: 142 IIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIK 201

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSYT QQ+AL+RGVDVVVGTPGRIIDL++G SLKL EVEYLVLDEA
Sbjct: 202 ESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEA 261

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEE VE I
Sbjct: 262 DQMLAVGFEEAVESI 276



 Score = 54.7 bits (130), Expect(2) = 3e-62
 Identities = 43/107 (40%), Positives = 50/107 (46%)
 Frame = -2

Query: 717 LSLVRRSCKQKLRIKHTVPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXX 538
           LSLVRR+ ++       VP A+ATPNSVLSEEAFK                     L   
Sbjct: 42  LSLVRRT-RRIHSSSLLVPSAVATPNSVLSEEAFK--------------------SLGLS 80

Query: 537 XXXXXXXXXXXXXXXXXDGDVLALDNLGLPTPLVEALEKRGITHLFP 397
                            DG+ LA+  L LP  L E+LEKRGITHLFP
Sbjct: 81  DHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFP 127


>ref|NP_680225.2| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana]
           gi|20856975|gb|AAM26693.1| At5g26743 [Arabidopsis
           thaliana] gi|28416497|gb|AAO42779.1| At5g26743
           [Arabidopsis thaliana] gi|332006181|gb|AED93564.1|
           DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis
           thaliana]
          Length = 747

 Score =  213 bits (541), Expect(2) = 3e-62
 Identities = 111/135 (82%), Positives = 120/135 (88%)
 Frame = -3

Query: 407 IFSRAKTGTGKTLAFGIPIIKRLTVDDEGRNIPRRSGRLPRFLVLAPTRELASQVEKEIR 228
           I +RAKTGTGKTLAFGIPIIKRLT +       RRSGRLP+FLVLAPTRELA QVEKEI+
Sbjct: 142 IIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIK 201

Query: 227 ESAPYLNTVCVYGGVSYTSQQNALSRGVDVVVGTPGRIIDLVKGNSLKLTEVEYLVLDEA 48
           ESAPYL+TVCVYGGVSYT QQ+AL+RGVDVVVGTPGRIIDL++G SLKL EVEYLVLDEA
Sbjct: 202 ESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEA 261

Query: 47  DQMLAVGFEEDVECI 3
           DQMLAVGFEE VE I
Sbjct: 262 DQMLAVGFEEAVESI 276



 Score = 54.7 bits (130), Expect(2) = 3e-62
 Identities = 43/107 (40%), Positives = 50/107 (46%)
 Frame = -2

Query: 717 LSLVRRSCKQKLRIKHTVPCAIATPNSVLSEEAFKXXXXXXXXXXXXXXXDVVPEQLYXX 538
           LSLVRR+ ++       VP A+ATPNSVLSEEAFK                     L   
Sbjct: 42  LSLVRRT-RRIHSSSLLVPSAVATPNSVLSEEAFK--------------------SLGLS 80

Query: 537 XXXXXXXXXXXXXXXXXDGDVLALDNLGLPTPLVEALEKRGITHLFP 397
                            DG+ LA+  L LP  L E+LEKRGITHLFP
Sbjct: 81  DHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFP 127