BLASTX nr result
ID: Papaver29_contig00008764
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00008764
(2003 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010248008.1| PREDICTED: replication factor C subunit 1 is... 263 e-129
ref|XP_010248015.1| PREDICTED: replication factor C subunit 1 is... 263 e-129
ref|XP_010031591.1| PREDICTED: replication factor C subunit 1 [E... 247 e-119
gb|KCW50954.1| hypothetical protein EUGRSUZ_J00591 [Eucalyptus g... 247 e-119
ref|XP_012066371.1| PREDICTED: replication factor C subunit 1 [J... 239 e-117
gb|KDP42975.1| hypothetical protein JCGZ_23917 [Jatropha curcas] 239 e-117
gb|KJB75074.1| hypothetical protein B456_012G023000 [Gossypium r... 228 e-115
ref|XP_008790175.1| PREDICTED: replication factor C subunit 1 is... 226 e-115
ref|XP_008790185.1| PREDICTED: replication factor C subunit 1 is... 226 e-115
ref|XP_008790193.1| PREDICTED: replication factor C subunit 1 is... 226 e-115
ref|XP_008790189.1| PREDICTED: replication factor C subunit 1 is... 224 e-115
ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma ca... 221 e-113
ref|XP_010917922.1| PREDICTED: replication factor C subunit 1 is... 218 e-113
ref|XP_010917920.1| PREDICTED: replication factor C subunit 1 is... 218 e-113
ref|XP_010917923.1| PREDICTED: replication factor C subunit 1 is... 218 e-113
ref|XP_008375618.1| PREDICTED: replication factor C subunit 1 [M... 228 e-112
gb|KDO48946.1| hypothetical protein CISIN_1g003867mg [Citrus sin... 225 e-112
ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-li... 225 e-112
ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citr... 222 e-112
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi... 219 e-111
>ref|XP_010248008.1| PREDICTED: replication factor C subunit 1 isoform X1 [Nelumbo
nucifera]
Length = 975
Score = 263 bits (671), Expect(3) = e-129
Identities = 158/312 (50%), Positives = 188/312 (60%), Gaps = 17/312 (5%)
Frame = +3
Query: 513 ESSGRRKTSRYFATKADKSKDEQEVEKTVTKRKPQESSKALD---EPPPVKKLHKAKEEK 683
E SGRRKTS+YFAT + K KDE+E+E T KRK ++S + L+ +PP K++HK E++
Sbjct: 52 EGSGRRKTSKYFATDSQKPKDEKEIECTPAKRKTEKSREELNCDVKPPSAKRVHKGDEDE 111
Query: 684 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGV-KKSVEIDKNDDEV----- 845
+ KKLKS KG+ +KSV+ D++D+EV
Sbjct: 112 DFVLPSLKKNSAKDTP-------------TKKLKSGSGKGIAQKSVDSDESDEEVPDDKT 158
Query: 846 ------GCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHKGEKEVPEGVPDCLV 1007
FMNFGER+DPPHKGEKE+PEG PDCL
Sbjct: 159 VKSPFKAAGRGAGGRGAAAAPAGGRGRGGGRGGFMNFGERKDPPHKGEKEIPEGAPDCLA 218
Query: 1008 GKTFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIEGRKSEIAKELGTA 1187
G TFVISGTL+SLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDI GRKS AKELGTA
Sbjct: 219 GLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIGGRKSTKAKELGTA 278
Query: 1188 FLTEDGLFALIHKSKPTKTPPQD--LKNTKDKGATSQPKGSPLKVVKGNEVSPSLEKKTP 1361
FLTEDGLF LI SKP K P ++ K T DK S PK SP KV + ++ +L +K
Sbjct: 279 FLTEDGLFDLIRASKPAKPPVREEPKKKTADKAVESLPKRSPKKVERKDQGGSALARKVG 338
Query: 1362 PKCSA*GVSPAK 1397
P SA GVS AK
Sbjct: 339 PTNSASGVSLAK 350
Score = 226 bits (575), Expect(3) = e-129
Identities = 110/157 (70%), Positives = 131/157 (83%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K PNDI+GNQ LVKQLH+WL++WN+ FLHT ++GKGKKQND G KKAVLISG+PGI
Sbjct: 365 KYRPKLPNDIIGNQSLVKQLHDWLANWNEQFLHTAKKGKGKKQNDGGAKKAVLISGTPGI 424
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GK+TSAK+VSQMLGFQ IEVNAS +RGKA++KI KGIGGS ANS+KELVSNE+LS ++R
Sbjct: 425 GKTTSAKVVSQMLGFQAIEVNASDNRGKADAKIFKGIGGSTANSVKELVSNEALSANLDR 484
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK KTVLIMDEVDGMS+ DRGG A + + S P
Sbjct: 485 SKHSKTVLIMDEVDGMSAGDRGGVADLIASIKISKIP 521
Score = 25.0 bits (53), Expect(3) = e-129
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 1412 SLTWPEKYKRRLP 1450
SLTW EKY+ +LP
Sbjct: 359 SLTWTEKYRPKLP 371
Score = 62.8 bits (151), Expect = 1e-06
Identities = 32/47 (68%), Positives = 33/47 (70%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK RKPTKQQ
Sbjct: 507 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLVLTFRKPTKQQ 553
>ref|XP_010248015.1| PREDICTED: replication factor C subunit 1 isoform X2 [Nelumbo
nucifera]
Length = 974
Score = 263 bits (671), Expect(3) = e-129
Identities = 158/312 (50%), Positives = 188/312 (60%), Gaps = 17/312 (5%)
Frame = +3
Query: 513 ESSGRRKTSRYFATKADKSKDEQEVEKTVTKRKPQESSKALD---EPPPVKKLHKAKEEK 683
E SGRRKTS+YFAT + K KDE+E+E T KRK ++S + L+ +PP K++HK E++
Sbjct: 51 EGSGRRKTSKYFATDSQKPKDEKEIECTPAKRKTEKSREELNCDVKPPSAKRVHKGDEDE 110
Query: 684 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGV-KKSVEIDKNDDEV----- 845
+ KKLKS KG+ +KSV+ D++D+EV
Sbjct: 111 DFVLPSLKKNSAKDTP-------------TKKLKSGSGKGIAQKSVDSDESDEEVPDDKT 157
Query: 846 ------GCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHKGEKEVPEGVPDCLV 1007
FMNFGER+DPPHKGEKE+PEG PDCL
Sbjct: 158 VKSPFKAAGRGAGGRGAAAAPAGGRGRGGGRGGFMNFGERKDPPHKGEKEIPEGAPDCLA 217
Query: 1008 GKTFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIEGRKSEIAKELGTA 1187
G TFVISGTL+SLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDI GRKS AKELGTA
Sbjct: 218 GLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIGGRKSTKAKELGTA 277
Query: 1188 FLTEDGLFALIHKSKPTKTPPQD--LKNTKDKGATSQPKGSPLKVVKGNEVSPSLEKKTP 1361
FLTEDGLF LI SKP K P ++ K T DK S PK SP KV + ++ +L +K
Sbjct: 278 FLTEDGLFDLIRASKPAKPPVREEPKKKTADKAVESLPKRSPKKVERKDQGGSALARKVG 337
Query: 1362 PKCSA*GVSPAK 1397
P SA GVS AK
Sbjct: 338 PTNSASGVSLAK 349
Score = 226 bits (575), Expect(3) = e-129
Identities = 110/157 (70%), Positives = 131/157 (83%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K PNDI+GNQ LVKQLH+WL++WN+ FLHT ++GKGKKQND G KKAVLISG+PGI
Sbjct: 364 KYRPKLPNDIIGNQSLVKQLHDWLANWNEQFLHTAKKGKGKKQNDGGAKKAVLISGTPGI 423
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GK+TSAK+VSQMLGFQ IEVNAS +RGKA++KI KGIGGS ANS+KELVSNE+LS ++R
Sbjct: 424 GKTTSAKVVSQMLGFQAIEVNASDNRGKADAKIFKGIGGSTANSVKELVSNEALSANLDR 483
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK KTVLIMDEVDGMS+ DRGG A + + S P
Sbjct: 484 SKHSKTVLIMDEVDGMSAGDRGGVADLIASIKISKIP 520
Score = 25.0 bits (53), Expect(3) = e-129
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 1412 SLTWPEKYKRRLP 1450
SLTW EKY+ +LP
Sbjct: 358 SLTWTEKYRPKLP 370
Score = 62.8 bits (151), Expect = 1e-06
Identities = 32/47 (68%), Positives = 33/47 (70%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK RKPTKQQ
Sbjct: 506 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLVLTFRKPTKQQ 552
>ref|XP_010031591.1| PREDICTED: replication factor C subunit 1 [Eucalyptus grandis]
gi|629084596|gb|KCW50953.1| hypothetical protein
EUGRSUZ_J00591 [Eucalyptus grandis]
Length = 966
Score = 247 bits (631), Expect(2) = e-119
Identities = 149/308 (48%), Positives = 175/308 (56%), Gaps = 11/308 (3%)
Frame = +3
Query: 510 QESSGRRKTSRYFATKADKSKDEQEVEKTVTKRKPQESSKALDEPPPVKKLHKAKEEKNX 689
QE+S RRKTS+YF + K KDE E E+ TKRKPQ+ ++ +PPP KK+H +++ +
Sbjct: 47 QENSARRKTSKYFPAEKQKPKDEIESEEVSTKRKPQKDTEGSLKPPPRKKMHTVEDDDDD 106
Query: 690 XXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGV-KKSVEIDKNDDE-------- 842
+KKLKS +GV KK V+I+++DD+
Sbjct: 107 DDDFVLPTPNKPSDVTP----------SKKLKSGSGRGVPKKPVDIEESDDDDHKCAKSP 156
Query: 843 --VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHKGEKEVPEGVPDCLVGKT 1016
G FMNFGER+DPPHKG+KEVPEG PDCL G T
Sbjct: 157 PKSGGRGRGGRGASAAPAGGRGRGGGGRGGFMNFGERKDPPHKGQKEVPEGAPDCLAGLT 216
Query: 1017 FVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIEGRKSEIAKELGTAFLT 1196
FVISGTL+SLEREEAEDLIKRHGGRVTGSVSKKTNYLL DEDIEGRKS AKELGT FLT
Sbjct: 217 FVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIEGRKSAKAKELGTTFLT 276
Query: 1197 EDGLFALIHKSKPTKTPPQDLKNTKDKGATSQPKGSPLKVVKGNEVSPSLEKKTPPKCSA 1376
EDGLF LI S TKTP Q+ + +K PSL KKTPPK
Sbjct: 277 EDGLFDLIRSSINTKTPVQEKSSRTEKAV------------------PSLTKKTPPKIDP 318
Query: 1377 *GVSPAKL 1400
VSP L
Sbjct: 319 KSVSPQGL 326
Score = 212 bits (539), Expect(2) = e-119
Identities = 107/157 (68%), Positives = 124/157 (78%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K PNDI+GNQ LV QLH WL+HWN+ FL TG++ KGKKQ D KKAVL+SG PGI
Sbjct: 350 KYRPKVPNDIIGNQSLVTQLHNWLAHWNEQFLDTGKKSKGKKQTDPSAKKAVLLSGPPGI 409
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GK+TSAK+V +MLGFQ +EVNAS SRGKA+SKI KGIGGS ANSIKELVSNESLSV M+
Sbjct: 410 GKTTSAKVVCKMLGFQAVEVNASDSRGKADSKISKGIGGSNANSIKELVSNESLSVNMDW 469
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK K+VLIMDEVDGMS+ DRGG A + + S P
Sbjct: 470 SKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIP 506
Score = 63.5 bits (153), Expect = 7e-07
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK + RKPTKQQ
Sbjct: 492 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQ 538
>gb|KCW50954.1| hypothetical protein EUGRSUZ_J00591 [Eucalyptus grandis]
Length = 899
Score = 247 bits (631), Expect(2) = e-119
Identities = 149/308 (48%), Positives = 175/308 (56%), Gaps = 11/308 (3%)
Frame = +3
Query: 510 QESSGRRKTSRYFATKADKSKDEQEVEKTVTKRKPQESSKALDEPPPVKKLHKAKEEKNX 689
QE+S RRKTS+YF + K KDE E E+ TKRKPQ+ ++ +PPP KK+H +++ +
Sbjct: 47 QENSARRKTSKYFPAEKQKPKDEIESEEVSTKRKPQKDTEGSLKPPPRKKMHTVEDDDDD 106
Query: 690 XXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGV-KKSVEIDKNDDE-------- 842
+KKLKS +GV KK V+I+++DD+
Sbjct: 107 DDDFVLPTPNKPSDVTP----------SKKLKSGSGRGVPKKPVDIEESDDDDHKCAKSP 156
Query: 843 --VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHKGEKEVPEGVPDCLVGKT 1016
G FMNFGER+DPPHKG+KEVPEG PDCL G T
Sbjct: 157 PKSGGRGRGGRGASAAPAGGRGRGGGGRGGFMNFGERKDPPHKGQKEVPEGAPDCLAGLT 216
Query: 1017 FVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIEGRKSEIAKELGTAFLT 1196
FVISGTL+SLEREEAEDLIKRHGGRVTGSVSKKTNYLL DEDIEGRKS AKELGT FLT
Sbjct: 217 FVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIEGRKSAKAKELGTTFLT 276
Query: 1197 EDGLFALIHKSKPTKTPPQDLKNTKDKGATSQPKGSPLKVVKGNEVSPSLEKKTPPKCSA 1376
EDGLF LI S TKTP Q+ + +K PSL KKTPPK
Sbjct: 277 EDGLFDLIRSSINTKTPVQEKSSRTEKAV------------------PSLTKKTPPKIDP 318
Query: 1377 *GVSPAKL 1400
VSP L
Sbjct: 319 KSVSPQGL 326
Score = 212 bits (539), Expect(2) = e-119
Identities = 107/157 (68%), Positives = 124/157 (78%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K PNDI+GNQ LV QLH WL+HWN+ FL TG++ KGKKQ D KKAVL+SG PGI
Sbjct: 350 KYRPKVPNDIIGNQSLVTQLHNWLAHWNEQFLDTGKKSKGKKQTDPSAKKAVLLSGPPGI 409
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GK+TSAK+V +MLGFQ +EVNAS SRGKA+SKI KGIGGS ANSIKELVSNESLSV M+
Sbjct: 410 GKTTSAKVVCKMLGFQAVEVNASDSRGKADSKISKGIGGSNANSIKELVSNESLSVNMDW 469
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK K+VLIMDEVDGMS+ DRGG A + + S P
Sbjct: 470 SKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIP 506
Score = 63.5 bits (153), Expect = 7e-07
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK + RKPTKQQ
Sbjct: 492 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQ 538
>ref|XP_012066371.1| PREDICTED: replication factor C subunit 1 [Jatropha curcas]
Length = 975
Score = 239 bits (609), Expect(2) = e-117
Identities = 151/308 (49%), Positives = 172/308 (55%), Gaps = 10/308 (3%)
Frame = +3
Query: 504 GGQESSGRRKTSRYFATKADKSKDEQEVEKTVTKRKPQESSKALDEPPPVKKLHKAKEEK 683
GG+E+SGRRKTS+YFA K K E+EV++ KRK Q + + PP+KK+HK +
Sbjct: 48 GGEENSGRRKTSKYFAKDKQKPKAEKEVDELPAKRKTQNDANESVKLPPLKKIHKVDDGG 107
Query: 684 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGVKKSVEIDKNDDE------- 842
+ +KKLK+V +GV K D +D E
Sbjct: 108 DDDDFVLPDKKKSVDATP-----------SKKLKTVSGRGVAKKAVDDDSDAEDDPKDES 156
Query: 843 --VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHKGEKEVPEGVPDCLVGKT 1016
FMNFGER+DPPHKGEKEVPEG PDCL G T
Sbjct: 157 PLKSGGRGRGGRGGSSALAGGRGRGSGRSGFMNFGERKDPPHKGEKEVPEGAPDCLAGLT 216
Query: 1017 FVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIEGRKSEIAKELGTAFLT 1196
FVISGTL+SLEREEAEDLIKRHGGRVTGSVSKKTNYLL DEDIEGRKS AKELGT FLT
Sbjct: 217 FVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIEGRKSSKAKELGTPFLT 276
Query: 1197 EDGLFALIHKSKPTKTPPQDLKNTKDKGATSQPKGSPLKV-VKGNEVSPSLEKKTPPKCS 1373
EDGLF +I SK K P + K SQPK SP K VK N S+ K K S
Sbjct: 277 EDGLFNMIRSSK-AKAPALNEAKESVKKVASQPKKSPEKAEVKCN----SITKNGSRKDS 331
Query: 1374 A*GVSPAK 1397
GVSPAK
Sbjct: 332 TSGVSPAK 339
Score = 214 bits (545), Expect(2) = e-117
Identities = 107/157 (68%), Positives = 126/157 (80%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K PNDI+GNQ LV QLH WL +W++ FL TG +GK KKQND+G KKAVL+SG+PGI
Sbjct: 355 KYRPKAPNDIIGNQSLVNQLHSWLKNWDEQFLGTGNKGKSKKQNDSGAKKAVLLSGTPGI 414
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GK+T+AKLVS+MLGFQ IEVNAS SRGKA++KI KGIGGS AN IKELVSNE+L V M+R
Sbjct: 415 GKTTAAKLVSRMLGFQAIEVNASDSRGKADNKISKGIGGSNANCIKELVSNEALGVNMDR 474
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK KTVLIMDEVDGMS+ DRGG A + + S P
Sbjct: 475 SKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIP 511
Score = 63.2 bits (152), Expect = 9e-07
Identities = 32/47 (68%), Positives = 33/47 (70%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK RKPTKQQ
Sbjct: 497 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQ 543
>gb|KDP42975.1| hypothetical protein JCGZ_23917 [Jatropha curcas]
Length = 966
Score = 239 bits (609), Expect(2) = e-117
Identities = 151/308 (49%), Positives = 172/308 (55%), Gaps = 10/308 (3%)
Frame = +3
Query: 504 GGQESSGRRKTSRYFATKADKSKDEQEVEKTVTKRKPQESSKALDEPPPVKKLHKAKEEK 683
GG+E+SGRRKTS+YFA K K E+EV++ KRK Q + + PP+KK+HK +
Sbjct: 39 GGEENSGRRKTSKYFAKDKQKPKAEKEVDELPAKRKTQNDANESVKLPPLKKIHKVDDGG 98
Query: 684 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGVKKSVEIDKNDDE------- 842
+ +KKLK+V +GV K D +D E
Sbjct: 99 DDDDFVLPDKKKSVDATP-----------SKKLKTVSGRGVAKKAVDDDSDAEDDPKDES 147
Query: 843 --VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHKGEKEVPEGVPDCLVGKT 1016
FMNFGER+DPPHKGEKEVPEG PDCL G T
Sbjct: 148 PLKSGGRGRGGRGGSSALAGGRGRGSGRSGFMNFGERKDPPHKGEKEVPEGAPDCLAGLT 207
Query: 1017 FVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIEGRKSEIAKELGTAFLT 1196
FVISGTL+SLEREEAEDLIKRHGGRVTGSVSKKTNYLL DEDIEGRKS AKELGT FLT
Sbjct: 208 FVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIEGRKSSKAKELGTPFLT 267
Query: 1197 EDGLFALIHKSKPTKTPPQDLKNTKDKGATSQPKGSPLKV-VKGNEVSPSLEKKTPPKCS 1373
EDGLF +I SK K P + K SQPK SP K VK N S+ K K S
Sbjct: 268 EDGLFNMIRSSK-AKAPALNEAKESVKKVASQPKKSPEKAEVKCN----SITKNGSRKDS 322
Query: 1374 A*GVSPAK 1397
GVSPAK
Sbjct: 323 TSGVSPAK 330
Score = 214 bits (545), Expect(2) = e-117
Identities = 107/157 (68%), Positives = 126/157 (80%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K PNDI+GNQ LV QLH WL +W++ FL TG +GK KKQND+G KKAVL+SG+PGI
Sbjct: 346 KYRPKAPNDIIGNQSLVNQLHSWLKNWDEQFLGTGNKGKSKKQNDSGAKKAVLLSGTPGI 405
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GK+T+AKLVS+MLGFQ IEVNAS SRGKA++KI KGIGGS AN IKELVSNE+L V M+R
Sbjct: 406 GKTTAAKLVSRMLGFQAIEVNASDSRGKADNKISKGIGGSNANCIKELVSNEALGVNMDR 465
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK KTVLIMDEVDGMS+ DRGG A + + S P
Sbjct: 466 SKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIP 502
Score = 63.2 bits (152), Expect = 9e-07
Identities = 32/47 (68%), Positives = 33/47 (70%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK RKPTKQQ
Sbjct: 488 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQ 534
>gb|KJB75074.1| hypothetical protein B456_012G023000 [Gossypium raimondii]
Length = 811
Score = 228 bits (581), Expect(2) = e-115
Identities = 143/303 (47%), Positives = 169/303 (55%), Gaps = 10/303 (3%)
Frame = +3
Query: 498 ISGGQESSGRRKTSRYFATKADKSKDEQEVEKTVTKRKPQESSKALDEPPPVKKLHKAKE 677
+ GGQE+SGRRKTS+YF + K KDEQE E+ KRK Q S ++ PP KK K
Sbjct: 37 VPGGQENSGRRKTSKYFPAEKQKPKDEQENEELPVKRKVQNESS--EKAPPSKKPSKVDV 94
Query: 678 EKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGV-KKSVEIDKNDDE---- 842
+ + +KKLKS KGV +K+V+ID++D++
Sbjct: 95 DDDFVLPKSKNSVDVTP--------------SKKLKSGSGKGVAQKAVDIDESDEDDVKD 140
Query: 843 -----VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHKGEKEVPEGVPDCLV 1007
FMNFGER+DPPHKGEKEVPEG PDCL
Sbjct: 141 LKSPVKPGGKVRGGRGASKGPAGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLT 200
Query: 1008 GKTFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIEGRKSEIAKELGTA 1187
G TFVISGTL+SLEREEAEDLIKR+GGRVTGSVSKKTNYLL DEDI GRKS AKELGT
Sbjct: 201 GLTFVISGTLDSLEREEAEDLIKRYGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTK 260
Query: 1188 FLTEDGLFALIHKSKPTKTPPQDLKNTKDKGATSQPKGSPLKVVKGNEVSPSLEKKTPPK 1367
FLTEDGLF +I S K P LK +K A + P K + EV +L K P
Sbjct: 261 FLTEDGLFDMIRASNHGKAP---LKGQSNKSAVTVAPSLPKKSPQQTEVKATLTKSPSPS 317
Query: 1368 CSA 1376
S+
Sbjct: 318 VSS 320
Score = 218 bits (556), Expect(2) = e-115
Identities = 110/157 (70%), Positives = 127/157 (80%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K PN+I GNQ LVKQLH+WL+ WN FL TG +GKGKKQND+G KKAVL+SG+PGI
Sbjct: 338 KYRPKVPNEITGNQSLVKQLHDWLTQWNKQFLGTGSKGKGKKQNDSGAKKAVLLSGTPGI 397
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GK+TSAKLVSQMLGFQ IEVNAS SRGKA++ + KGIGGS ANSIKELVSNE+L V M+R
Sbjct: 398 GKTTSAKLVSQMLGFQTIEVNASDSRGKADANVSKGIGGSNANSIKELVSNEALGVNMDR 457
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK KTVLIMDEVDGMS+ DRGG A + + S P
Sbjct: 458 SKHPKTVLIMDEVDGMSAGDRGGIADLIASIKISKIP 494
Score = 62.8 bits (151), Expect = 1e-06
Identities = 31/47 (65%), Positives = 33/47 (70%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
G+ADLIASIK SKIPIICICNDR+SQK RKPTKQQ
Sbjct: 480 GIADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSYRKPTKQQ 526
>ref|XP_008790175.1| PREDICTED: replication factor C subunit 1 isoform X1 [Phoenix
dactylifera]
Length = 986
Score = 226 bits (575), Expect(2) = e-115
Identities = 148/328 (45%), Positives = 179/328 (54%), Gaps = 26/328 (7%)
Frame = +3
Query: 492 K*ISGGQESSGRRKTSRYFATKA-------DKSKDEQEVEKTVTKRKPQESSKALDE--- 641
K + G QE+SGRRKTS+YFAT +KDE+ EK+ KRK Q+ ++ +
Sbjct: 42 KSVQGAQENSGRRKTSKYFATTTATESSSKKTTKDEKVTEKSPAKRKAQKITEDFQDDVK 101
Query: 642 PPPVKKLHKAKEEKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGVKKSVE 821
P P KK HK +++ +KKL S G+ K+
Sbjct: 102 PVPAKKFHKDEDDD--------------FVPSNDRKKAAEVKPSKKLNSRSSGGISKN-S 146
Query: 822 IDKND-----DE---------VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPP 959
+DKND DE V FMNFGER+DPP
Sbjct: 147 VDKNDVDYDEDELDDKYVETPVKAGGRGRGGRGAGAAAGGRGRGGGRGGFMNFGERKDPP 206
Query: 960 HKGEKEVPEGVPDCLVGKTFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADE 1139
HKGEKEVPEG P+CL G TFVISGTL+SLEREEAEDLIKRHGGRVTGS+SKKT++LLADE
Sbjct: 207 HKGEKEVPEGAPECLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSISKKTSFLLADE 266
Query: 1140 DIEGRKSEIAKELGTAFLTEDGLFALIHKSKPTKTPPQD--LKNTKDKGATSQPKGSPLK 1313
DI GRKS AKELG FLTEDGLF +I KSKP K P Q+ K T +K S K +PLK
Sbjct: 267 DIGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKAPVQEEQKKKTLEKVEKSPIKSTPLK 326
Query: 1314 VVKGNEVSPSLEKKTPPKCSA*GVSPAK 1397
V ++V S+ +K K SP K
Sbjct: 327 VEAKDQVG-SVGRKDAAKIVKSSTSPDK 353
Score = 220 bits (561), Expect(2) = e-115
Identities = 109/157 (69%), Positives = 130/157 (82%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K P+DI+GNQ LVKQLH+WL HWN+ FLHTGQ+GKGKKQ D+G KKAVL+SGSPGI
Sbjct: 369 KYRPKVPDDIIGNQSLVKQLHDWLVHWNEQFLHTGQKGKGKKQADSGSKKAVLLSGSPGI 428
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GKSTSAKLVSQMLGFQ IEVNAS +RGKA++KI+KG+GG+ +NSIKELVSNE+LS +
Sbjct: 429 GKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKELVSNEALSCRKNW 488
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK K+VLIMDEVDGMS+ DRGG A + + S P
Sbjct: 489 SKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIP 525
Score = 63.5 bits (153), Expect = 7e-07
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK + RKPTKQQ
Sbjct: 511 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQ 557
>ref|XP_008790185.1| PREDICTED: replication factor C subunit 1 isoform X2 [Phoenix
dactylifera]
Length = 985
Score = 226 bits (575), Expect(2) = e-115
Identities = 148/328 (45%), Positives = 179/328 (54%), Gaps = 26/328 (7%)
Frame = +3
Query: 492 K*ISGGQESSGRRKTSRYFATKA-------DKSKDEQEVEKTVTKRKPQESSKALDE--- 641
K + G QE+SGRRKTS+YFAT +KDE+ EK+ KRK Q+ ++ +
Sbjct: 42 KSVQGAQENSGRRKTSKYFATTTATESSSKKTTKDEKVTEKSPAKRKAQKITEDFQDDVK 101
Query: 642 PPPVKKLHKAKEEKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGVKKSVE 821
P P KK HK +++ +KKL S G+ K+
Sbjct: 102 PVPAKKFHKDEDDD--------------FVPSNDRKKAAEVKPSKKLNSRSSGGISKN-S 146
Query: 822 IDKND-----DE---------VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPP 959
+DKND DE V FMNFGER+DPP
Sbjct: 147 VDKNDVDYDEDELDDKYVETPVKAGGRGRGGRGAGAAAGGRGRGGGRGGFMNFGERKDPP 206
Query: 960 HKGEKEVPEGVPDCLVGKTFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADE 1139
HKGEKEVPEG P+CL G TFVISGTL+SLEREEAEDLIKRHGGRVTGS+SKKT++LLADE
Sbjct: 207 HKGEKEVPEGAPECLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSISKKTSFLLADE 266
Query: 1140 DIEGRKSEIAKELGTAFLTEDGLFALIHKSKPTKTPPQD--LKNTKDKGATSQPKGSPLK 1313
DI GRKS AKELG FLTEDGLF +I KSKP K P Q+ K T +K S K +PLK
Sbjct: 267 DIGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKAPVQEEQKKKTLEKVEKSPIKSTPLK 326
Query: 1314 VVKGNEVSPSLEKKTPPKCSA*GVSPAK 1397
V ++V S+ +K K SP K
Sbjct: 327 VEAKDQVG-SVGRKDAAKIVKSSTSPDK 353
Score = 220 bits (561), Expect(2) = e-115
Identities = 109/157 (69%), Positives = 130/157 (82%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K P+DI+GNQ LVKQLH+WL HWN+ FLHTGQ+GKGKKQ D+G KKAVL+SGSPGI
Sbjct: 369 KYRPKVPDDIIGNQSLVKQLHDWLVHWNEQFLHTGQKGKGKKQADSGSKKAVLLSGSPGI 428
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GKSTSAKLVSQMLGFQ IEVNAS +RGKA++KI+KG+GG+ +NSIKELVSNE+LS +
Sbjct: 429 GKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKELVSNEALSCRKNW 488
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK K+VLIMDEVDGMS+ DRGG A + + S P
Sbjct: 489 SKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIP 525
Score = 63.5 bits (153), Expect = 7e-07
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK + RKPTKQQ
Sbjct: 511 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQ 557
>ref|XP_008790193.1| PREDICTED: replication factor C subunit 1 isoform X4 [Phoenix
dactylifera]
Length = 955
Score = 226 bits (575), Expect(2) = e-115
Identities = 148/328 (45%), Positives = 179/328 (54%), Gaps = 26/328 (7%)
Frame = +3
Query: 492 K*ISGGQESSGRRKTSRYFATKA-------DKSKDEQEVEKTVTKRKPQESSKALDE--- 641
K + G QE+SGRRKTS+YFAT +KDE+ EK+ KRK Q+ ++ +
Sbjct: 42 KSVQGAQENSGRRKTSKYFATTTATESSSKKTTKDEKVTEKSPAKRKAQKITEDFQDDVK 101
Query: 642 PPPVKKLHKAKEEKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGVKKSVE 821
P P KK HK +++ +KKL S G+ K+
Sbjct: 102 PVPAKKFHKDEDDD--------------FVPSNDRKKAAEVKPSKKLNSRSSGGISKN-S 146
Query: 822 IDKND-----DE---------VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPP 959
+DKND DE V FMNFGER+DPP
Sbjct: 147 VDKNDVDYDEDELDDKYVETPVKAGGRGRGGRGAGAAAGGRGRGGGRGGFMNFGERKDPP 206
Query: 960 HKGEKEVPEGVPDCLVGKTFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADE 1139
HKGEKEVPEG P+CL G TFVISGTL+SLEREEAEDLIKRHGGRVTGS+SKKT++LLADE
Sbjct: 207 HKGEKEVPEGAPECLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSISKKTSFLLADE 266
Query: 1140 DIEGRKSEIAKELGTAFLTEDGLFALIHKSKPTKTPPQD--LKNTKDKGATSQPKGSPLK 1313
DI GRKS AKELG FLTEDGLF +I KSKP K P Q+ K T +K S K +PLK
Sbjct: 267 DIGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKAPVQEEQKKKTLEKVEKSPIKSTPLK 326
Query: 1314 VVKGNEVSPSLEKKTPPKCSA*GVSPAK 1397
V ++V S+ +K K SP K
Sbjct: 327 VEAKDQVG-SVGRKDAAKIVKSSTSPDK 353
Score = 220 bits (561), Expect(2) = e-115
Identities = 109/157 (69%), Positives = 130/157 (82%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K P+DI+GNQ LVKQLH+WL HWN+ FLHTGQ+GKGKKQ D+G KKAVL+SGSPGI
Sbjct: 369 KYRPKVPDDIIGNQSLVKQLHDWLVHWNEQFLHTGQKGKGKKQADSGSKKAVLLSGSPGI 428
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GKSTSAKLVSQMLGFQ IEVNAS +RGKA++KI+KG+GG+ +NSIKELVSNE+LS +
Sbjct: 429 GKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKELVSNEALSCRKNW 488
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK K+VLIMDEVDGMS+ DRGG A + + S P
Sbjct: 489 SKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIP 525
Score = 63.5 bits (153), Expect = 7e-07
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK + RKPTKQQ
Sbjct: 511 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQ 557
>ref|XP_008790189.1| PREDICTED: replication factor C subunit 1 isoform X3 [Phoenix
dactylifera]
Length = 980
Score = 224 bits (570), Expect(2) = e-115
Identities = 144/316 (45%), Positives = 175/316 (55%), Gaps = 27/316 (8%)
Frame = +3
Query: 492 K*ISGGQESSGRRKTSRYFATKA-------DKSKDEQEVEKTVTKRKPQESSKALDE--- 641
K + G QE+SGRRKTS+YFAT +KDE+ EK+ KRK Q+ ++ +
Sbjct: 42 KSVQGAQENSGRRKTSKYFATTTATESSSKKTTKDEKVTEKSPAKRKAQKITEDFQDDVK 101
Query: 642 PPPVKKLHKAKEEKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGVKKSVE 821
P P KK HK +++ +KKL S G+ K+
Sbjct: 102 PVPAKKFHKDEDDD--------------FVPSNDRKKAAEVKPSKKLNSRSSGGISKN-S 146
Query: 822 IDKND-----DE---------VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPP 959
+DKND DE V FMNFGER+DPP
Sbjct: 147 VDKNDVDYDEDELDDKYVETPVKAGGRGRGGRGAGAAAGGRGRGGGRGGFMNFGERKDPP 206
Query: 960 HKGEKEVPEGVPDCLVGKTFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADE 1139
HKGEKEVPEG P+CL G TFVISGTL+SLEREEAEDLIKRHGGRVTGS+SKKT++LLADE
Sbjct: 207 HKGEKEVPEGAPECLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSISKKTSFLLADE 266
Query: 1140 DIEGRKSEIAKELGTAFLTEDGLFALIHKSKPTKTPPQD--LKNTKDKGATSQPKGSPLK 1313
DI GRKS AKELG FLTEDGLF +I KSKP K P Q+ K T +K S K +PLK
Sbjct: 267 DIGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKAPVQEEQKKKTLEKVEKSPIKSTPLK 326
Query: 1314 V-VKGNEVSPSLEKKT 1358
V KG + + + K +
Sbjct: 327 VEAKGRKDAAKIVKSS 342
Score = 220 bits (561), Expect(2) = e-115
Identities = 109/157 (69%), Positives = 130/157 (82%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K P+DI+GNQ LVKQLH+WL HWN+ FLHTGQ+GKGKKQ D+G KKAVL+SGSPGI
Sbjct: 363 KYRPKVPDDIIGNQSLVKQLHDWLVHWNEQFLHTGQKGKGKKQADSGSKKAVLLSGSPGI 422
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GKSTSAKLVSQMLGFQ IEVNAS +RGKA++KI+KG+GG+ +NSIKELVSNE+LS +
Sbjct: 423 GKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKELVSNEALSCRKNW 482
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK K+VLIMDEVDGMS+ DRGG A + + S P
Sbjct: 483 SKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIP 519
Score = 63.5 bits (153), Expect = 7e-07
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK + RKPTKQQ
Sbjct: 505 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQ 551
>ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma cacao]
gi|508727448|gb|EOY19345.1| Replication factor C subunit
1 [Theobroma cacao]
Length = 1012
Score = 221 bits (563), Expect(2) = e-113
Identities = 112/157 (71%), Positives = 128/157 (81%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K PN++ GNQ LV QLH WL+HWN+ FL TG +GKGKKQND G KKAVL+SG+PGI
Sbjct: 343 KYRPKVPNEMTGNQSLVNQLHNWLAHWNEQFLGTGSKGKGKKQNDPGAKKAVLLSGTPGI 402
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GK+TSAKLVSQMLGFQ IEVNAS SRGKA++KI KGIGGS ANSIKELVSNE+LSV M+R
Sbjct: 403 GKTTSAKLVSQMLGFQTIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEALSVNMDR 462
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK KTVLIMDEVDGMS+ DRGG A + + S P
Sbjct: 463 SKHVKTVLIMDEVDGMSAGDRGGIADLIASIKISKIP 499
Score = 218 bits (556), Expect(2) = e-113
Identities = 134/300 (44%), Positives = 164/300 (54%), Gaps = 13/300 (4%)
Frame = +3
Query: 498 ISGGQESSGRRKTSRYFATKADKSKDEQEVEKTVTKRKPQESSKALDEPPPVKKLHKAKE 677
+ GG+E+SGRRKTS+YF + K EQ E+ KRK Q ++++++PPP KK K
Sbjct: 33 VPGGRENSGRRKTSKYFPAGKQQPKGEQGTEELPAKRKVQNENESVEKPPPSKKPSKVGI 92
Query: 678 EKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGVKKSVEIDKNDDE----- 842
+ + +KK KS +GV + E + DE
Sbjct: 93 DDDFVLPKSRNTVDVTP--------------SKKRKSGSGRGVAQKAEDNDESDEDDAKD 138
Query: 843 ------VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHKGEKEVPEGVPDCL 1004
G FMNFGER+DPPHKGEKEVPEG PDCL
Sbjct: 139 LESPVKSGGRGGRGGTGASVAPASGRGRGRGRGGFMNFGERKDPPHKGEKEVPEGAPDCL 198
Query: 1005 VGKTFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIEGRKSEIAKELGT 1184
G TFVISGTL+SLEREEAEDLIKRHGGR+T +VSKKTNYLL DEDIEGRKS AKELG
Sbjct: 199 AGLTFVISGTLDSLEREEAEDLIKRHGGRITTAVSKKTNYLLCDEDIEGRKSSKAKELGI 258
Query: 1185 AFLTEDGLFALIHKSKPTKT-PPQDLKNTKDKGATSQPKGSPLKV-VKGNEVSPSLEKKT 1358
FLTEDGLF +I S K ++ K + + A S PK SP K+ VK N S + K+
Sbjct: 259 PFLTEDGLFDMIRASNCGKAHSKEESKKSAESFAASLPKKSPQKMEVKSNSSSAKISGKS 318
Score = 62.8 bits (151), Expect = 1e-06
Identities = 31/47 (65%), Positives = 33/47 (70%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
G+ADLIASIK SKIPIICICNDR+SQK RKPTKQQ
Sbjct: 485 GIADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQ 531
>ref|XP_010917922.1| PREDICTED: replication factor C subunit 1 isoform X2 [Elaeis
guineensis]
Length = 981
Score = 218 bits (554), Expect(3) = e-113
Identities = 108/157 (68%), Positives = 128/157 (81%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K PNDI+GNQ LVKQLH+WL HWN+ FLHT Q+GKGKKQ D+G KKAVL+SGSPGI
Sbjct: 365 KYRPKVPNDIIGNQSLVKQLHDWLIHWNEQFLHTDQKGKGKKQADSGSKKAVLLSGSPGI 424
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GKSTSAKLVSQMLGFQ IEVNAS +RGKA++KI+KG+GG+ +NSIKEL+SNE+LS
Sbjct: 425 GKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKELISNEALSCGKNW 484
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK K+VLIMDEVDGMS+ DRGG A + + S P
Sbjct: 485 SKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIP 521
Score = 216 bits (550), Expect(3) = e-113
Identities = 142/324 (43%), Positives = 172/324 (53%), Gaps = 24/324 (7%)
Frame = +3
Query: 498 ISGGQESSGRRKTSRYFATKA-------DKSKDEQEVEKTVTKRKPQESSKALDE---PP 647
+ G QE+SGRRKTS+YFAT +KD + +K+ KRK Q+ + + P
Sbjct: 44 VQGAQENSGRRKTSKYFATTTATESGSKQTTKDGKVTQKSPAKRKAQKIREDFQDDVKPV 103
Query: 648 PVKKLHKAKEEKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGVKKSVEID 827
P KK HK +++ +KKLKS GV K+ +D
Sbjct: 104 PAKKFHKDEDDD--------------FVPSNDKKKAAEVKPSKKLKSGSGGGVSKN-SVD 148
Query: 828 KNDDE--------------VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHK 965
K+DD+ + FMNFGER+DPPHK
Sbjct: 149 KDDDDYDEDELDDKYVETPIKAGGRGRGGRGAGAAAGGRGRGGGRGGFMNFGERKDPPHK 208
Query: 966 GEKEVPEGVPDCLVGKTFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDI 1145
GEKEVPEG P+CL G TFVISGTL+SLEREEAEDLIK HGGRVTGSVSK+T++LLADEDI
Sbjct: 209 GEKEVPEGAPECLAGLTFVISGTLDSLEREEAEDLIKHHGGRVTGSVSKRTSFLLADEDI 268
Query: 1146 EGRKSEIAKELGTAFLTEDGLFALIHKSKPTKTPPQDLKNTKDKGATSQPKGSPLKVVKG 1325
GRKS AKELG FLTEDGLF +I KSKP K Q+ K K S K +PLKV
Sbjct: 269 GGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKAHVQE--EQKKKVEKSPIKSTPLKVEAK 326
Query: 1326 NEVSPSLEKKTPPKCSA*GVSPAK 1397
+ V S +K K G SP K
Sbjct: 327 DRVG-SGGRKDAAKIVKSGTSPGK 349
Score = 26.9 bits (58), Expect(3) = e-113
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 1394 QACGNSSLTWPEKYKRRLP 1450
Q+ SSLTW EKY+ ++P
Sbjct: 353 QSTDRSSLTWTEKYRPKVP 371
Score = 63.5 bits (153), Expect = 7e-07
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK + RKPTKQQ
Sbjct: 507 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQ 553
>ref|XP_010917920.1| PREDICTED: replication factor C subunit 1 isoform X1 [Elaeis
guineensis] gi|743775094|ref|XP_010917921.1| PREDICTED:
replication factor C subunit 1 isoform X1 [Elaeis
guineensis]
Length = 982
Score = 218 bits (554), Expect(3) = e-113
Identities = 108/157 (68%), Positives = 128/157 (81%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K PNDI+GNQ LVKQLH+WL HWN+ FLHT Q+GKGKKQ D+G KKAVL+SGSPGI
Sbjct: 366 KYRPKVPNDIIGNQSLVKQLHDWLIHWNEQFLHTDQKGKGKKQADSGSKKAVLLSGSPGI 425
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GKSTSAKLVSQMLGFQ IEVNAS +RGKA++KI+KG+GG+ +NSIKEL+SNE+LS
Sbjct: 426 GKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKELISNEALSCGKNW 485
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK K+VLIMDEVDGMS+ DRGG A + + S P
Sbjct: 486 SKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIP 522
Score = 216 bits (549), Expect(3) = e-113
Identities = 141/324 (43%), Positives = 171/324 (52%), Gaps = 24/324 (7%)
Frame = +3
Query: 498 ISGGQESSGRRKTSRYFATKA-------DKSKDEQEVEKTVTKRKPQESSKALDE---PP 647
+ G QE+SGRRKTS+YFAT +KD + +K+ KRK Q+ + + P
Sbjct: 44 VQGAQENSGRRKTSKYFATTTATESGSKQTTKDGKVTQKSPAKRKAQKIREDFQDDVKPV 103
Query: 648 PVKKLHKAKEEKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGVKKSVEID 827
P KK HK +++ +KKLKS GV K+ +D
Sbjct: 104 PAKKFHKDEDDD--------------FVPSNDKKKAAEVKPSKKLKSGSGGGVSKN-SVD 148
Query: 828 KNDDE--------------VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHK 965
K+DD+ + FMNFGER+DPPHK
Sbjct: 149 KDDDDYDEDELDDKYVETPIKAGGRGRGGRGAGAAAGGRGRGGGRGGFMNFGERKDPPHK 208
Query: 966 GEKEVPEGVPDCLVGKTFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDI 1145
GEKEVPEG P+CL G TFVISGTL+SLEREEAEDLIK HGGRVTGSVSK+T++LLADEDI
Sbjct: 209 GEKEVPEGAPECLAGLTFVISGTLDSLEREEAEDLIKHHGGRVTGSVSKRTSFLLADEDI 268
Query: 1146 EGRKSEIAKELGTAFLTEDGLFALIHKSKPTKTPPQDLKNTKDKGATSQPKGSPLKVVKG 1325
GRKS AKELG FLTEDGLF +I KSKP K Q+ K K S K +PLKV
Sbjct: 269 GGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKAHVQE--EQKKKVEKSPIKSTPLKVEAK 326
Query: 1326 NEVSPSLEKKTPPKCSA*GVSPAK 1397
+ S +K K G SP K
Sbjct: 327 VDRVGSGGRKDAAKIVKSGTSPGK 350
Score = 26.9 bits (58), Expect(3) = e-113
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 1394 QACGNSSLTWPEKYKRRLP 1450
Q+ SSLTW EKY+ ++P
Sbjct: 354 QSTDRSSLTWTEKYRPKVP 372
Score = 63.5 bits (153), Expect = 7e-07
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK + RKPTKQQ
Sbjct: 508 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQ 554
>ref|XP_010917923.1| PREDICTED: replication factor C subunit 1 isoform X3 [Elaeis
guineensis]
Length = 813
Score = 218 bits (554), Expect(3) = e-113
Identities = 108/157 (68%), Positives = 128/157 (81%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K PNDI+GNQ LVKQLH+WL HWN+ FLHT Q+GKGKKQ D+G KKAVL+SGSPGI
Sbjct: 366 KYRPKVPNDIIGNQSLVKQLHDWLIHWNEQFLHTDQKGKGKKQADSGSKKAVLLSGSPGI 425
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GKSTSAKLVSQMLGFQ IEVNAS +RGKA++KI+KG+GG+ +NSIKEL+SNE+LS
Sbjct: 426 GKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKELISNEALSCGKNW 485
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK K+VLIMDEVDGMS+ DRGG A + + S P
Sbjct: 486 SKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIP 522
Score = 216 bits (549), Expect(3) = e-113
Identities = 141/324 (43%), Positives = 171/324 (52%), Gaps = 24/324 (7%)
Frame = +3
Query: 498 ISGGQESSGRRKTSRYFATKA-------DKSKDEQEVEKTVTKRKPQESSKALDE---PP 647
+ G QE+SGRRKTS+YFAT +KD + +K+ KRK Q+ + + P
Sbjct: 44 VQGAQENSGRRKTSKYFATTTATESGSKQTTKDGKVTQKSPAKRKAQKIREDFQDDVKPV 103
Query: 648 PVKKLHKAKEEKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGVKKSVEID 827
P KK HK +++ +KKLKS GV K+ +D
Sbjct: 104 PAKKFHKDEDDD--------------FVPSNDKKKAAEVKPSKKLKSGSGGGVSKN-SVD 148
Query: 828 KNDDE--------------VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHK 965
K+DD+ + FMNFGER+DPPHK
Sbjct: 149 KDDDDYDEDELDDKYVETPIKAGGRGRGGRGAGAAAGGRGRGGGRGGFMNFGERKDPPHK 208
Query: 966 GEKEVPEGVPDCLVGKTFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDI 1145
GEKEVPEG P+CL G TFVISGTL+SLEREEAEDLIK HGGRVTGSVSK+T++LLADEDI
Sbjct: 209 GEKEVPEGAPECLAGLTFVISGTLDSLEREEAEDLIKHHGGRVTGSVSKRTSFLLADEDI 268
Query: 1146 EGRKSEIAKELGTAFLTEDGLFALIHKSKPTKTPPQDLKNTKDKGATSQPKGSPLKVVKG 1325
GRKS AKELG FLTEDGLF +I KSKP K Q+ K K S K +PLKV
Sbjct: 269 GGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKAHVQE--EQKKKVEKSPIKSTPLKVEAK 326
Query: 1326 NEVSPSLEKKTPPKCSA*GVSPAK 1397
+ S +K K G SP K
Sbjct: 327 VDRVGSGGRKDAAKIVKSGTSPGK 350
Score = 26.9 bits (58), Expect(3) = e-113
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 1394 QACGNSSLTWPEKYKRRLP 1450
Q+ SSLTW EKY+ ++P
Sbjct: 354 QSTDRSSLTWTEKYRPKVP 372
Score = 63.5 bits (153), Expect = 7e-07
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK + RKPTKQQ
Sbjct: 508 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQ 554
>ref|XP_008375618.1| PREDICTED: replication factor C subunit 1 [Malus domestica]
Length = 959
Score = 228 bits (582), Expect(2) = e-112
Identities = 139/294 (47%), Positives = 162/294 (55%), Gaps = 11/294 (3%)
Frame = +3
Query: 498 ISGGQESSGRRKTSRYFATKADKSKDEQEVEKTVTKRKPQESSKALDEPPPVKKLHKAKE 677
+ GGQE+SGRRKTS+YF T DK KDE+ + KRKP + +P P KK HK
Sbjct: 34 VQGGQENSGRRKTSKYFPT--DKPKDEKGTTEVPAKRKPHKDPDESIKPSPAKKAHKVDV 91
Query: 678 EKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGVKKSV----EIDKNDDEV 845
+ + +KKLKS G+ + V E D++V
Sbjct: 92 DDDDDFVSSNSKKKSVYATP-----------SKKLKSTSGTGIPQKVMANDEAGDEDEKV 140
Query: 846 G------CTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHKGEKEVPEGVPDCLV 1007
FMN+GER+DPPHKGEKEVPEG P+CL
Sbjct: 141 AESSLKPAGRGRGGRGASAVPAGGRGRGAGRGGFMNYGERKDPPHKGEKEVPEGAPNCLA 200
Query: 1008 GKTFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIEGRKSEIAKELGTA 1187
G TFVISGTL+SLEREEAEDLIKRHGGR+TGSVSKKTNYLL DEDIEGRKS AKELGTA
Sbjct: 201 GLTFVISGTLDSLEREEAEDLIKRHGGRITGSVSKKTNYLLCDEDIEGRKSSKAKELGTA 260
Query: 1188 FLTEDGLFALIHKSKPTKTPPQDL-KNTKDKGATSQPKGSPLKVVKGNEVSPSL 1346
FLTEDGLF I S K P Q+ K+ D A S P SP KV + + SL
Sbjct: 261 FLTEDGLFGKIRASIGAKVPVQEAKKSVDDAAAASLPSKSPKKVTLKKDCTGSL 314
Score = 208 bits (530), Expect(2) = e-112
Identities = 109/157 (69%), Positives = 125/157 (79%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K PNDI+GNQ LVKQLH+WLSHWN+ FL TG + KGK ++G KKAVL+SG+PGI
Sbjct: 348 KYRPKVPNDIVGNQSLVKQLHDWLSHWNEQFLDTGDKKKGKNPINSGAKKAVLLSGTPGI 407
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GK+TSAKLVSQMLGFQ IEVNAS SRGKA+SKI KGIGGS ANSIKELVSN+ LS M+
Sbjct: 408 GKTTSAKLVSQMLGFQAIEVNASDSRGKADSKIEKGIGGSNANSIKELVSNKGLS--MDG 465
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK KTVLIMDEVDGMS+ DRGG A + + S P
Sbjct: 466 SKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIP 502
Score = 63.2 bits (152), Expect = 9e-07
Identities = 32/47 (68%), Positives = 33/47 (70%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK RKPTKQQ
Sbjct: 488 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQ 534
>gb|KDO48946.1| hypothetical protein CISIN_1g003867mg [Citrus sinensis]
gi|641829841|gb|KDO48947.1| hypothetical protein
CISIN_1g003867mg [Citrus sinensis]
Length = 790
Score = 225 bits (574), Expect(2) = e-112
Identities = 144/309 (46%), Positives = 169/309 (54%), Gaps = 11/309 (3%)
Frame = +3
Query: 504 GGQESSGRRKTSRYFATKADKSKDEQEVEKTVTKRKPQESSKALDEPPPVKKLHKAKEEK 683
GG ES GRRKTS+YFAT K +D E E+ KRK ++ P+KK HKA ++
Sbjct: 41 GGHESMGRRKTSKYFATDKQKPEDGGEKEELPAKRKAEKDDGKSVRSSPLKKFHKADDDD 100
Query: 684 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGV-KKSVEIDKNDDE------ 842
+ +KKLKS + V +KSV+ID +++E
Sbjct: 101 DDFVPPSVKKNSVGATP------------SKKLKSGSGRAVAQKSVDIDDDEEEDVKKTE 148
Query: 843 ---VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHKGEKEVPEGVPDCLVGK 1013
FMNFGER+DPPHKGEKEVPEG PDCL G
Sbjct: 149 SPLKSSGRGRGGRGASGAPAVGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLGGL 208
Query: 1014 TFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIEGRKSEIAKELGTAFL 1193
TFVISGTL+SLEREEAEDLIKRHGGRVTGSVSKKTNYLL DEDI G KS AKELGT FL
Sbjct: 209 TFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIAGAKSTKAKELGTPFL 268
Query: 1194 TEDGLFALIHKSKPTKTPPQ-DLKNTKDKGATSQPKGSPLKVVKGNEVSPSLEKKTPPKC 1370
TEDGLF +I SKP K Q + K + +K A S PK SP + E + K P +
Sbjct: 269 TEDGLFDMIRASKPMKALAQAESKKSVEKVAASLPKKSPQNI----EAKSTSAPKAPIER 324
Query: 1371 SA*GVSPAK 1397
SPAK
Sbjct: 325 MKTVASPAK 333
Score = 211 bits (538), Expect(2) = e-112
Identities = 106/157 (67%), Positives = 125/157 (79%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + KTPN+I+GNQ LVKQLH WL+HWN+ FL TG + GKKQND +KA ++SGSPG+
Sbjct: 349 KYRPKTPNEIVGNQQLVKQLHTWLAHWNEKFLDTGTKRNGKKQNDASAEKAAILSGSPGM 408
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GK+T+AKLV QMLGFQ IEVNAS SRGKA++KI KGIGGS ANSIKELVSNE+LS M+R
Sbjct: 409 GKTTAAKLVCQMLGFQAIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEALSANMDR 468
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK KTVLIMDEVDGMS+ DRGG A + + S P
Sbjct: 469 SKHPKTVLIMDEVDGMSAGDRGGIADLIASIKISKIP 505
>ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Citrus
sinensis] gi|568869228|ref|XP_006487830.1| PREDICTED:
replication factor C subunit 1-like isoform X2 [Citrus
sinensis]
Length = 958
Score = 225 bits (573), Expect(2) = e-112
Identities = 144/309 (46%), Positives = 169/309 (54%), Gaps = 11/309 (3%)
Frame = +3
Query: 504 GGQESSGRRKTSRYFATKADKSKDEQEVEKTVTKRKPQESSKALDEPPPVKKLHKAKEEK 683
GG ES GRRKTS+YFAT K +D E E+ KRK ++ P+KK HKA ++
Sbjct: 41 GGHESMGRRKTSKYFATDKQKPEDGGEKEELPAKRKAKKDDGKSVRSSPLKKFHKADDDD 100
Query: 684 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGV-KKSVEIDKNDDE------ 842
+ +KKLKS + V +KSV+ID +++E
Sbjct: 101 DDFVPPSVKKNSVGATP------------SKKLKSGSGRAVAQKSVDIDDDEEEDVKKTE 148
Query: 843 ---VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHKGEKEVPEGVPDCLVGK 1013
FMNFGER+DPPHKGEKEVPEG PDCL G
Sbjct: 149 SPLKSSGRGRGGRGASGAPAVGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLGGL 208
Query: 1014 TFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIEGRKSEIAKELGTAFL 1193
TFVISGTL+SLEREEAEDLIKRHGGRVTGSVSKKTNYLL DEDI G KS AKELGT FL
Sbjct: 209 TFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIAGAKSTKAKELGTPFL 268
Query: 1194 TEDGLFALIHKSKPTKTPPQ-DLKNTKDKGATSQPKGSPLKVVKGNEVSPSLEKKTPPKC 1370
TEDGLF +I SKP K Q + K + +K A S PK SP + E + K P +
Sbjct: 269 TEDGLFDMIRASKPMKALAQAESKKSVEKVAASLPKKSPQNI----EAKSTSAPKAPIER 324
Query: 1371 SA*GVSPAK 1397
SPAK
Sbjct: 325 MKTVASPAK 333
Score = 211 bits (538), Expect(2) = e-112
Identities = 106/157 (67%), Positives = 125/157 (79%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + KTPN+I+GNQ LVKQLH WL+HWN+ FL TG + GKKQND +KA ++SGSPG+
Sbjct: 349 KYRPKTPNEIVGNQQLVKQLHTWLAHWNEKFLDTGTKRNGKKQNDASAEKAAILSGSPGM 408
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GK+T+AKLV QMLGFQ IEVNAS SRGKA++KI KGIGGS ANSIKELVSNE+LS M+R
Sbjct: 409 GKTTAAKLVCQMLGFQAIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEALSANMDR 468
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK KTVLIMDEVDGMS+ DRGG A + + S P
Sbjct: 469 SKHPKTVLIMDEVDGMSAGDRGGIADLIASIKISKIP 505
>ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citrus clementina]
gi|557525989|gb|ESR37295.1| hypothetical protein
CICLE_v10027762mg [Citrus clementina]
Length = 958
Score = 222 bits (565), Expect(2) = e-112
Identities = 142/309 (45%), Positives = 167/309 (54%), Gaps = 11/309 (3%)
Frame = +3
Query: 504 GGQESSGRRKTSRYFATKADKSKDEQEVEKTVTKRKPQESSKALDEPPPVKKLHKAKEEK 683
GG ES GRRKTS+YFAT K +D E E+ KRK ++ P+KK HKA ++
Sbjct: 41 GGHESMGRRKTSKYFATDKQKPEDGGEKEELPAKRKAEKDDGKSVRSSPLKKFHKADDDD 100
Query: 684 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGV-KKSVEIDKNDDE------ 842
+ +KKLKS + V +KSV+ID +++E
Sbjct: 101 DDFVPPSVKKNSVGATP------------SKKLKSGSGRAVAQKSVDIDDDEEEDVKKTE 148
Query: 843 ---VGCTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHKGEKEVPEGVPDCLVGK 1013
FMNFGER+DPPHKGEKEVPEG PDCL G
Sbjct: 149 SPLKSSGRGRGGRGASGAPAVGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGL 208
Query: 1014 TFVISGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIEGRKSEIAKELGTAFL 1193
TFVISGTL+SLEREEAEDLIKRHGGRVT SV KKTNYLL DEDI G KS AKELGT FL
Sbjct: 209 TFVISGTLDSLEREEAEDLIKRHGGRVTESVPKKTNYLLCDEDIGGAKSTKAKELGTPFL 268
Query: 1194 TEDGLFALIHKSKPTKTPPQ-DLKNTKDKGATSQPKGSPLKVVKGNEVSPSLEKKTPPKC 1370
TEDGLF +I SKP K Q + K + +K A S PK SP + E + K P +
Sbjct: 269 TEDGLFDMIRASKPMKALAQAESKKSVEKVAASLPKKSPQNI----EAKSTSAPKAPSER 324
Query: 1371 SA*GVSPAK 1397
SPAK
Sbjct: 325 MKTVASPAK 333
Score = 213 bits (542), Expect(2) = e-112
Identities = 108/163 (66%), Positives = 126/163 (77%)
Frame = +1
Query: 1411 LANMARKVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLI 1590
L K + KTPN+I+GNQ LVKQLH WL+HWN+ FL TG + GKKQND +KA L+
Sbjct: 343 LLTWTEKYRPKTPNEIVGNQQLVKQLHAWLAHWNEKFLDTGTKRNGKKQNDASAEKAALL 402
Query: 1591 SGSPGIGKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESL 1770
SGSPG+GK+T+AKLV QMLGFQ IEVNAS SRGKA++KI KGIGGS ANSIKELVSNE+L
Sbjct: 403 SGSPGMGKTTAAKLVCQMLGFQAIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEAL 462
Query: 1771 SVKMERSKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
S M+RSK KTVLIMDEVDGMS+ DRGG A + + S P
Sbjct: 463 SANMDRSKHPKTVLIMDEVDGMSAGDRGGIADLIASIKISKIP 505
>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
gi|75168909|sp|Q9C587.1|RFC1_ARATH RecName:
Full=Replication factor C subunit 1; Short=AtRFC1;
AltName: Full=Activator 1 large subunit; AltName:
Full=Activator 1 subunit 1 gi|13374860|emb|CAC34494.1|
replication factor C large subunit-like protein
[Arabidopsis thaliana] gi|48958527|gb|AAT47816.1|
At5g22010 [Arabidopsis thaliana]
gi|332005585|gb|AED92968.1| replication factor C1
[Arabidopsis thaliana]
Length = 956
Score = 219 bits (559), Expect(2) = e-111
Identities = 136/294 (46%), Positives = 163/294 (55%), Gaps = 10/294 (3%)
Frame = +3
Query: 513 ESSGRRKTSRYFATKADKSKDEQEVEKTVTKRKPQESSKALDEPPPVKKLHKAKEEKNXX 692
E++ RRKTS+YF K KDE+EVE KRK + S L +P P +K+ K ++ +
Sbjct: 49 ETADRRKTSKYFGKDKTKVKDEKEVEAIPAKRKLKTESDDLVKPRP-RKVTKVVDDDDDD 107
Query: 693 XXXXXXXXXXXXXXXXXXXXXXXXXXAKKLKSVPRKGVKKSVEIDKNDDEVG-------- 848
+KKLKS +G+ S +D +DD+ G
Sbjct: 108 FDVPISRKTRDTTP------------SKKLKSGSGRGIA-SKTVDNDDDDDGEDKETPLK 154
Query: 849 -CTXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERRDPPHKGEKEVPEGVPDCLVGKTFVI 1025
FMNFGER+DPPHKGEKEVPEG PDCL G TFVI
Sbjct: 155 SAGRGRGGRAAPGASTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGTPDCLAGLTFVI 214
Query: 1026 SGTLESLEREEAEDLIKRHGGRVTGSVSKKTNYLLADEDIEGRKSEIAKELGTAFLTEDG 1205
SGTL+SLEREEAEDLIKRHGGR+TGSVSKKT YLL DEDI GRKSE AKELGT FLTEDG
Sbjct: 215 SGTLDSLEREEAEDLIKRHGGRITGSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDG 274
Query: 1206 LFALIHKSKPTKTPPQDLKNTKDKGATSQPKGSPLK-VVKGNEVSPSLEKKTPP 1364
LF +I SKP K + N + + PK SP K +G ++ S KK PP
Sbjct: 275 LFDIIRSSKPVKKSLPERSNKGTEKICAPPKTSPQKEETRGKPLAKSSPKKVPP 328
Score = 213 bits (541), Expect(2) = e-111
Identities = 106/157 (67%), Positives = 124/157 (78%)
Frame = +1
Query: 1429 KVQTKTPNDILGNQLLVKQLHEWLSHWNDHFLHTGQQGKGKKQNDNGVKKAVLISGSPGI 1608
K + K PN+I+GNQ LV QLH WLSHW+D F TG +GKGKK ND G KKAVL+SG+PGI
Sbjct: 345 KYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGSKKAVLLSGTPGI 404
Query: 1609 GKSTSAKLVSQMLGFQGIEVNASVSRGKANSKILKGIGGSMANSIKELVSNESLSVKMER 1788
GK+TSAKLVSQMLGFQ +EVNAS SRGKANS I KGIGGS ANS+KELV+NE+++ +R
Sbjct: 405 GKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANSVKELVNNEAMAANFDR 464
Query: 1789 SKQQKTVLIMDEVDGMSSRDRGGTAGWLTLLPASNFP 1899
SK KTVLIMDEVDGMS+ DRGG A + + S P
Sbjct: 465 SKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIP 501
Score = 63.5 bits (153), Expect = 7e-07
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +3
Query: 1863 GVADLIASIKFSKIPIICICNDRHSQKXXXXXXXXXXXDCRKPTKQQ 2003
GVADLIASIK SKIPIICICNDR+SQK + RKPTKQQ
Sbjct: 487 GVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRKPTKQQ 533