BLASTX nr result

ID: Papaver29_contig00008620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00008620
         (452 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008237595.1| PREDICTED: eukaryotic translation initiation...    57   7e-06

>ref|XP_008237595.1| PREDICTED: eukaryotic translation initiation factor 5B [Prunus
           mume]
          Length = 1367

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 60/161 (37%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
 Frame = -1

Query: 452 DILDEGDAETKEESKLDEEDEPVISFTGXXXXXXXXXXXS--NLFSAALLDE--DDNTTN 285
           D LD+ D E K+E K  ++D P I+F+G           S  N FSAALLDE  D+NT+ 
Sbjct: 222 DALDDAD-EDKDEEKDADDDVPQITFSGKKKKSSKASKKSGGNAFSAALLDEGNDENTSV 280

Query: 284 S----LGDDAIVEDEDVPAITFXXXXXXXXXXXXXXSLVNELSSSAGIGEDNT---EMEQ 126
           S    +GDD  VEDED   I F              S++   S    +G +NT   E EQ
Sbjct: 281 SESTRVGDDG-VEDEDASVIAF--TGKKKSSKKKGNSVITASSEETKVGAENTDVVEPEQ 337

Query: 125 HSLKDDTREADVKASVKLSDVPPSETXXXXXXXXXSGRTAQ 3
            S +    EAD     K  +VP  ET         SGRTAQ
Sbjct: 338 PSKETSKIEADDAKVNKSKEVP--ETSKSKKKKKKSGRTAQ 376


Top