BLASTX nr result

ID: Papaver29_contig00008446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00008446
         (959 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007021323.1| F-box and associated interaction domains-con...    60   2e-06
ref|XP_009609767.1| PREDICTED: F-box protein CPR30-like [Nicotia...    59   7e-06

>ref|XP_007021323.1| F-box and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|590608658|ref|XP_007021324.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao] gi|590608661|ref|XP_007021325.1|
           F-box and associated interaction domains-containing
           protein, putative isoform 1 [Theobroma cacao]
           gi|508720951|gb|EOY12848.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao] gi|508720952|gb|EOY12849.1| F-box
           and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|508720953|gb|EOY12850.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao]
          Length = 398

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 61/204 (29%), Positives = 86/204 (42%), Gaps = 4/204 (1%)
 Frame = -3

Query: 957 FFNLEKDGSDEYNFKLLH-KHESQGRSIEPVGNCNGLSCFQRMGISPGSEEIIIVNPFRR 781
           F + + D  DEY  K LH   +S       VG+CNGL C Q       S E+I+ NP  +
Sbjct: 71  FLHFDNDDFDEY--KQLHFPFKSNSPWFRLVGSCNGLVCLQDGFFPLDSVELILWNPSIQ 128

Query: 780 ETLNLICLIPKIGGG--GGSLKYLCHGFGFDLLSQEYKVVLIYTTSTSEGDRGFICMVL- 610
           + + L    PK G     G       GFGFD  + +YK++ + + S  E       + L 
Sbjct: 129 KYITL----PKPGVTCLSGRAYNSTLGFGFDSRTNDYKLLNVVSMSVGEEAETLTEVYLF 184

Query: 609 TLGVRSWRKVVTSTCDILPPPGCSPFPSQMVTTMWKKDHRSAAICGGDLLWRITHTGSLD 430
           +L   SW++V      I P  G              + H  +A   G + W + +    D
Sbjct: 185 SLDGNSWKRVTA----ISPKYGI-------------EGHEFSAFVNGAVHW-LGYQRGKD 226

Query: 429 GNKIEMLLSFDIHNEKIQFIGLPE 358
           G    M+L FDI  EK   I LPE
Sbjct: 227 GGFRNMVLGFDISTEKFNVIRLPE 250


>ref|XP_009609767.1| PREDICTED: F-box protein CPR30-like [Nicotiana tomentosiformis]
          Length = 320

 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
 Frame = -3

Query: 870 VGNCNGLSCFQRMGISPGSEEIIIVNPFRRETLNLICLIPKIGGGGGSLKYLCHGFGFDL 691
           VG+ +GL C  RM    G +++ I NP  RE + L    P++ G       + +GFG D 
Sbjct: 113 VGSIHGLVCLFRMHCDSGLDDVYIFNPTTREYITL----PEVKGLRKYPNLVTYGFGLDP 168

Query: 690 LSQEYKVVLIYTTSTSEGDRGFI----CMVLTLGVRSWRKV 580
           +  EYKVV IY   T +  +G        V TLG  SWR +
Sbjct: 169 VRMEYKVVRIYQVETHDPAKGAYYTSEVQVYTLGTGSWRSI 209


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