BLASTX nr result

ID: Papaver29_contig00008335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00008335
         (1377 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012066094.1| PREDICTED: psbP domain-containing protein 4,...    68   2e-08
ref|XP_011074779.1| PREDICTED: psbP domain-containing protein 4,...    65   1e-07
gb|ABK96683.1| unknown [Populus trichocarpa x Populus deltoides]       65   2e-07
ref|XP_009360718.1| PREDICTED: psbP domain-containing protein 4,...    64   2e-07
ref|XP_002300943.1| hypothetical protein POPTR_0002s07330g [Popu...    64   2e-07
ref|XP_011027385.1| PREDICTED: psbP domain-containing protein 4,...    64   4e-07
ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4,...    62   9e-07
ref|XP_004290590.1| PREDICTED: psbP domain-containing protein 4,...    62   2e-06
ref|XP_009377705.1| PREDICTED: psbP domain-containing protein 4,...    61   2e-06
ref|XP_009610844.1| PREDICTED: psbP domain-containing protein 4,...    60   6e-06
ref|XP_004237726.1| PREDICTED: psbP domain-containing protein 4,...    59   8e-06
ref|XP_002526176.1| Thylakoid lumenal 29.8 kDa protein, chloropl...    59   1e-05

>ref|XP_012066094.1| PREDICTED: psbP domain-containing protein 4, chloroplastic
           [Jatropha curcas] gi|643736789|gb|KDP43060.1|
           hypothetical protein JCGZ_25246 [Jatropha curcas]
          Length = 262

 Score = 67.8 bits (164), Expect = 2e-08
 Identities = 35/71 (49%), Positives = 45/71 (63%)
 Frame = -2

Query: 236 SRTKASLDSNEDRYCVNVNEKNNGFLKRREALXXXXXXXVLMGSFPSDGLAVIKQGLLAG 57
           SRTKA+ +  +  +    NEK +GF KR   +         +  FP DGLAV+KQGLLAG
Sbjct: 23  SRTKATAEPRDGGFFDGENEKLSGFSKRSVLVSGLSLLSSSVLGFPRDGLAVVKQGLLAG 82

Query: 56  RVPGLSDPDEQ 24
           R+PGLS+PDEQ
Sbjct: 83  RIPGLSEPDEQ 93


>ref|XP_011074779.1| PREDICTED: psbP domain-containing protein 4, chloroplastic [Sesamum
           indicum]
          Length = 276

 Score = 65.1 bits (157), Expect = 1e-07
 Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = -2

Query: 236 SRTKASLDSNEDRYCVNVNEKNNGFLKRREALXXXXXXXV-LMGSFPSDGLAVIKQGLLA 60
           SR +AS  S ++  C   NE+ +G + RR A+          +  FP DGLA++KQGLLA
Sbjct: 36  SRIRASAGSTQNWCCTVENEEFSGLMSRRAAMASGVALVSSAVVGFPGDGLALVKQGLLA 95

Query: 59  GRVPGLSDPDEQ 24
           GR+PGLS+PDEQ
Sbjct: 96  GRIPGLSEPDEQ 107


>gb|ABK96683.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 119

 Score = 64.7 bits (156), Expect = 2e-07
 Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
 Frame = -2

Query: 242 YSSRTKASLDSNEDRYCVNVNEKNNGFLKRREALXXXXXXXV--LMGSFPSDGLAVIKQG 69
           +SSR K + +S ++ +    NEK+  FLKRR  L          ++GS   +GLAV+KQG
Sbjct: 34  FSSRAKITAESRKNGFLDGENEKSAWFLKRRSVLVSGVSLVSTSVLGS-AGEGLAVVKQG 92

Query: 68  LLAGRVPGLSDPDEQDR 18
           LLAGR+PGLS+PD+Q R
Sbjct: 93  LLAGRIPGLSEPDDQGR 109


>ref|XP_009360718.1| PREDICTED: psbP domain-containing protein 4, chloroplastic [Pyrus x
           bretschneideri] gi|694426635|ref|XP_009340985.1|
           PREDICTED: psbP domain-containing protein 4,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 267

 Score = 64.3 bits (155), Expect = 2e-07
 Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
 Frame = -2

Query: 233 RTKASLDSNEDRYCVNVNEKNNGFLKRREALXXXXXXXVLMGS----FPSDGLAVIKQGL 66
           RTKA+  S E+ +     +K +G LKRR  L        L+ S    FP +GLAV+KQGL
Sbjct: 27  RTKAASSSTENGFVEGEADKFSGILKRRSVLLSAGVS--LLSSQVFGFPREGLAVVKQGL 84

Query: 65  LAGRVPGLSDPDEQ 24
           LAGR+PGLS+PDEQ
Sbjct: 85  LAGRIPGLSEPDEQ 98


>ref|XP_002300943.1| hypothetical protein POPTR_0002s07330g [Populus trichocarpa]
           gi|222842669|gb|EEE80216.1| hypothetical protein
           POPTR_0002s07330g [Populus trichocarpa]
          Length = 276

 Score = 64.3 bits (155), Expect = 2e-07
 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = -2

Query: 242 YSSRTKASLDSNEDRYCVNVNEKNNGFLKRREALXXXXXXXV--LMGSFPSDGLAVIKQG 69
           + SR K + +S ++ +    NEK+ GFLKRR  L          ++GS   +GLAV+KQG
Sbjct: 34  FPSRAKITAESRKNGFLDGENEKSAGFLKRRSVLVSGVSLVSTSVLGS-AGEGLAVVKQG 92

Query: 68  LLAGRVPGLSDPDEQ 24
           LLAGR+PGLS+PD+Q
Sbjct: 93  LLAGRIPGLSEPDDQ 107


>ref|XP_011027385.1| PREDICTED: psbP domain-containing protein 4, chloroplastic [Populus
           euphratica]
          Length = 276

 Score = 63.5 bits (153), Expect = 4e-07
 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = -2

Query: 242 YSSRTKASLDSNEDRYCVNVNEKNNGFLKRREALXXXXXXXV--LMGSFPSDGLAVIKQG 69
           + SR K + +S ++ +    NEK+ GFLKRR  L          ++GS   +GLAV+KQG
Sbjct: 34  FPSRAKITAESRKNGFPDGENEKSAGFLKRRSVLVSGVSLVSTSVLGS-AGEGLAVVKQG 92

Query: 68  LLAGRVPGLSDPDEQ 24
           LLAGR+PGLS+PD+Q
Sbjct: 93  LLAGRIPGLSEPDDQ 107


>ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4, chloroplastic [Vitis
           vinifera] gi|302142754|emb|CBI19957.3| unnamed protein
           product [Vitis vinifera]
          Length = 279

 Score = 62.4 bits (150), Expect = 9e-07
 Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 6/77 (7%)
 Frame = -2

Query: 236 SRTKASLDSNEDRYCVNV----NEKNNGFLKRREALXXXXXXXV--LMGSFPSDGLAVIK 75
           S  KA++D+ ++  CV       EK +GFLKRR A+          ++G FP +GLAV+K
Sbjct: 36  SVAKAAVDTRQNG-CVEFVDEETEKFSGFLKRRSAIVSGVSLISSAVLG-FPREGLAVVK 93

Query: 74  QGLLAGRVPGLSDPDEQ 24
           QGLLAGRVPGLS+PDEQ
Sbjct: 94  QGLLAGRVPGLSEPDEQ 110


>ref|XP_004290590.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 276

 Score = 61.6 bits (148), Expect = 2e-06
 Identities = 37/70 (52%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
 Frame = -2

Query: 230 TKASLDSNEDRYCVNVNEKNNGFLKRREA-LXXXXXXXVLMGSFPSDGLAVIKQGLLAGR 54
           TK+   S E        EK +G LKRR   L         +  FP DGLAVIKQGLLAGR
Sbjct: 38  TKSEASSREYGVLNGEAEKVSGILKRRSVVLSGASLVSSAVLGFPGDGLAVIKQGLLAGR 97

Query: 53  VPGLSDPDEQ 24
           VPGLS+PDEQ
Sbjct: 98  VPGLSEPDEQ 107


>ref|XP_009377705.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
           [Pyrus x bretschneideri]
          Length = 277

 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
 Frame = -2

Query: 239 SSRTKASLDSNEDRYCVNVNEKNNGFLKRREALXXXXXXXV---LMGSFPSDGLAVIKQG 69
           +SRTK    S E        E  +G LKRR  L           ++G FP +GLAV+KQG
Sbjct: 35  NSRTKVGSSSTESGLVDGEAENFSGILKRRSVLLSAGASLFSSQVLG-FPGEGLAVVKQG 93

Query: 68  LLAGRVPGLSDPDEQ 24
           LLAGR+PGLS+PDEQ
Sbjct: 94  LLAGRIPGLSEPDEQ 108


>ref|XP_009610844.1| PREDICTED: psbP domain-containing protein 4, chloroplastic isoform
           X1 [Nicotiana tomentosiformis]
          Length = 278

 Score = 59.7 bits (143), Expect = 6e-06
 Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = -2

Query: 236 SRTKASLDSNEDRYCVNVNEKNNGFLKRREALXXXXXXXV--LMGSFPSDGLAVIKQGLL 63
           SR KA+  S ED +     EK+ G L RR  +          L+G FP +G AV+KQGLL
Sbjct: 38  SRIKAAACSKEDVHVSQDCEKSAGSLNRRSTIVSGVSLISSVLLG-FPGEGSAVVKQGLL 96

Query: 62  AGRVPGLSDPDEQ 24
           AGRVPGLS+PDE+
Sbjct: 97  AGRVPGLSEPDEE 109


>ref|XP_004237726.1| PREDICTED: psbP domain-containing protein 4, chloroplastic [Solanum
           lycopersicum]
          Length = 276

 Score = 59.3 bits (142), Expect = 8e-06
 Identities = 34/71 (47%), Positives = 43/71 (60%)
 Frame = -2

Query: 236 SRTKASLDSNEDRYCVNVNEKNNGFLKRREALXXXXXXXVLMGSFPSDGLAVIKQGLLAG 57
           SR K+++ S ED       E + G L RR A+         +  FP +G AVIKQGLLAG
Sbjct: 37  SRIKSAVCSKEDARMNRDCEISAGSLNRRSAIISGASLISSVLLFPGEGSAVIKQGLLAG 96

Query: 56  RVPGLSDPDEQ 24
           RVPGLS+PDE+
Sbjct: 97  RVPGLSEPDEE 107


>ref|XP_002526176.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223534553|gb|EEF36252.1| Thylakoid
           lumenal 29.8 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 270

 Score = 58.9 bits (141), Expect = 1e-05
 Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = -2

Query: 236 SRTKASLDSNEDRYCVNVNEKNNGFLKRREALXXXXXXXV--LMGSFPSDGLAVIKQGLL 63
           SR +A+++  E        EK  G LKRR AL          ++G FP DGLA +KQGLL
Sbjct: 37  SRIRATIEPREF-------EKPIGLLKRRSALVSGISLASSTILG-FPGDGLAAVKQGLL 88

Query: 62  AGRVPGLSDPDEQ 24
           AGR+PGLS+PDEQ
Sbjct: 89  AGRIPGLSEPDEQ 101