BLASTX nr result
ID: Papaver29_contig00008114
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00008114
(1031 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010265125.1| PREDICTED: chloroplastic group IIA intron sp... 256 2e-65
ref|XP_002532154.1| conserved hypothetical protein [Ricinus comm... 236 2e-59
ref|XP_010663603.1| PREDICTED: chloroplastic group IIA intron sp... 233 2e-58
ref|XP_010663604.1| PREDICTED: chloroplastic group IIA intron sp... 233 2e-58
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera] 233 2e-58
ref|XP_010094746.1| Chloroplastic group IIA intron splicing faci... 231 5e-58
ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theob... 231 5e-58
ref|XP_008453396.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti... 230 1e-57
ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prun... 229 4e-57
ref|XP_004138244.2| PREDICTED: chloroplastic group IIA intron sp... 226 3e-56
ref|XP_008240263.1| PREDICTED: chloroplastic group IIA intron sp... 225 4e-56
ref|XP_009347186.1| PREDICTED: chloroplastic group IIA intron sp... 225 5e-56
ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron sp... 225 5e-56
gb|KHG01961.1| Chloroplastic group IIA intron splicing facilitat... 224 7e-56
ref|XP_012440292.1| PREDICTED: chloroplastic group IIA intron sp... 224 9e-56
ref|XP_012440291.1| PREDICTED: chloroplastic group IIA intron sp... 224 9e-56
ref|XP_012440290.1| PREDICTED: chloroplastic group IIA intron sp... 224 9e-56
ref|XP_011045860.1| PREDICTED: chloroplastic group IIA intron sp... 224 1e-55
ref|XP_011045859.1| PREDICTED: chloroplastic group IIA intron sp... 224 1e-55
ref|XP_008374754.1| PREDICTED: chloroplastic group IIA intron sp... 224 1e-55
>ref|XP_010265125.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Nelumbo nucifera]
Length = 838
Score = 256 bits (655), Expect = 2e-65
Identities = 152/283 (53%), Positives = 184/283 (65%), Gaps = 13/283 (4%)
Frame = -2
Query: 817 KSSAPS------WRTTNSPAG--KRKLDPDFKDVVENQSENR--NGDRGRGAIERIVHRL 668
KS PS W + N P G R D + + VE+ E+R +GD+GR AIERI HRL
Sbjct: 83 KSRTPSAPWLNKWPSVNPPIGAVNRIADSEKQRKVEDPVESRYFDGDKGRSAIERIAHRL 142
Query: 667 RNLGLGSXXXXXXXXXXXXVNA-YTGEEKLGDLLQRKWSRPDSYIXXXXXXXXXDRMLLP 491
RNLGLGS +GEEKLGDLL+R WSRPDS + +MLLP
Sbjct: 143 RNLGLGSDDEDEEVGGESNEEMPLSGEEKLGDLLKRTWSRPDSILHEDEDEKG--KMLLP 200
Query: 490 WERGEDERQVEEGG--VLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINIPKAGVT 317
WER ED++ EE G + KKKRVKAPT AELTIEDA R+NIPKAGVT
Sbjct: 201 WERDEDDQSEEEDGRGLKKKKRVKAPTLAELTIEDAELRRLRTLGMTLRERVNIPKAGVT 260
Query: 316 QLIVEKIHDQWRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVVYRGSTY 137
Q+I+EKIH++WRKSELVRLKFHE+LAHDM+TA IVE RT GLVIWRSGS+MVVYRGS Y
Sbjct: 261 QVILEKIHEKWRKSELVRLKFHETLAHDMKTALEIVERRTGGLVIWRSGSIMVVYRGSNY 320
Query: 136 QRPSSSKSVHKETVDFFVPDVSSAGHPIMKNDNNAVSASERRE 8
+ S K+V E FVPDVSS+ + I K +N+ +SA E+++
Sbjct: 321 EPFSRLKTVESEGNALFVPDVSSSANSISKINNDIMSAPEKKD 363
>ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
gi|223528164|gb|EEF30228.1| conserved hypothetical
protein [Ricinus communis]
Length = 745
Score = 236 bits (603), Expect = 2e-59
Identities = 147/312 (47%), Positives = 183/312 (58%), Gaps = 9/312 (2%)
Frame = -2
Query: 916 LLKPFSSISSALRTTEHXXXXXXXXXXXXNHYKKSSAPSWRTTNSPAGKRKLDPDFKDVV 737
L +PFSS SS+ ++ K W +SP K P
Sbjct: 35 LNRPFSSSSSSSSSSSSLGTNQNPKPNNP---KSPWLSKWAPHSSPPPTVKTSPKLAQDK 91
Query: 736 ENQSENRNGDRGRGAIERIVHRLRNLGLGSXXXXXXXXXXXXVN-----AYTGEEKLGDL 572
+ QS + D+G+ AIERIV RLRNLGLGS N A TGEE+L DL
Sbjct: 92 KIQSLTK--DKGQNAIERIVLRLRNLGLGSDDEEEEGDMEYKPNGGDSIAVTGEERLADL 149
Query: 571 LQRKWSRPDSYIXXXXXXXXXDRMLLPWERGEDER---QVEEGGVLKKKRVKAPTYAELT 401
LQR+W RPD+ D ++LPWER E R + EEG +++ VKAPT AELT
Sbjct: 150 LQREWVRPDTIFIKDDEEDDNDDLVLPWERKEKVRREGEKEEGERERRRVVKAPTLAELT 209
Query: 400 IEDAXXXXXXXXXXXXXXRINIPKAGVTQLIVEKIHDQWRKSELVRLKFHESLAHDMRTA 221
IED R+N+PKAG+T+ +VEKIHD+WRK+ELVRLKFHE LAHDM+TA
Sbjct: 210 IEDEELRRLRRMGMFLRERVNVPKAGLTKEVVEKIHDKWRKNELVRLKFHEVLAHDMKTA 269
Query: 220 HAIVEDRTRGLVIWRSGSVMVVYRGSTYQ-RPSSSKSVHKETVDFFVPDVSSAGHPIMKN 44
H I E RT GLVIWR+GSVMVVYRGS+Y+ PS ++ V++E F+PDVSSAG MK
Sbjct: 270 HEITERRTGGLVIWRAGSVMVVYRGSSYEGPPSKTQPVNREGDALFIPDVSSAGSETMKG 329
Query: 43 DNNAVSASERRE 8
DN A SA+E+RE
Sbjct: 330 DNVAPSAAEKRE 341
>ref|XP_010663603.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X1 [Vitis vinifera]
Length = 833
Score = 233 bits (593), Expect = 2e-58
Identities = 132/270 (48%), Positives = 160/270 (59%), Gaps = 2/270 (0%)
Frame = -2
Query: 817 KSSAPSWRTTNSPAGKRKLDPDFKDVVENQSENRNGDRGRGAIERIVHRLRNLGLGSXXX 638
KS W + N D K +S +G G AIERIV RLRNLGLGS
Sbjct: 76 KSWINKWPSPNPSIESEHKGIDSKGRDGTESRYFDGRSGTSAIERIVLRLRNLGLGSDDE 135
Query: 637 XXXXXXXXXVNAY--TGEEKLGDLLQRKWSRPDSYIXXXXXXXXXDRMLLPWERGEDERQ 464
+ TG+EKLGDLLQR W RPDS + M+LPWERGE+ ++
Sbjct: 136 DKNEGEVESGDTMPVTGDEKLGDLLQRDWVRPDSMLIEDEDEDD---MILPWERGEERQE 192
Query: 463 VEEGGVLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINIPKAGVTQLIVEKIHDQW 284
E G LK++ V+APT AELTIED RIN+PKAG+TQ ++ KIH++W
Sbjct: 193 EEGDGRLKRRAVRAPTLAELTIEDEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKW 252
Query: 283 RKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVVYRGSTYQRPSSSKSVHK 104
RK ELVRLKFHE+LAHDM+TAH IVE RT GLV WRSGSVMVV+RG+ Y+ P + V
Sbjct: 253 RKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGSVMVVFRGTNYEGPPKPQPVDG 312
Query: 103 ETVDFFVPDVSSAGHPIMKNDNNAVSASER 14
E FVPDVSS +P M+NDNN E+
Sbjct: 313 EGDSLFVPDVSSVDNPAMRNDNNGGPTLEK 342
>ref|XP_010663604.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X2 [Vitis vinifera]
gi|297734212|emb|CBI15459.3| unnamed protein product
[Vitis vinifera]
Length = 830
Score = 233 bits (593), Expect = 2e-58
Identities = 132/270 (48%), Positives = 160/270 (59%), Gaps = 2/270 (0%)
Frame = -2
Query: 817 KSSAPSWRTTNSPAGKRKLDPDFKDVVENQSENRNGDRGRGAIERIVHRLRNLGLGSXXX 638
KS W + N D K +S +G G AIERIV RLRNLGLGS
Sbjct: 76 KSWINKWPSPNPSIESEHKGIDSKGRDGTESRYFDGRSGTSAIERIVLRLRNLGLGSDDE 135
Query: 637 XXXXXXXXXVNAY--TGEEKLGDLLQRKWSRPDSYIXXXXXXXXXDRMLLPWERGEDERQ 464
+ TG+EKLGDLLQR W RPDS + M+LPWERGE+ ++
Sbjct: 136 DKNEGEVESGDTMPVTGDEKLGDLLQRDWVRPDSMLIEDEDEDD---MILPWERGEERQE 192
Query: 463 VEEGGVLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINIPKAGVTQLIVEKIHDQW 284
E G LK++ V+APT AELTIED RIN+PKAG+TQ ++ KIH++W
Sbjct: 193 EEGDGRLKRRAVRAPTLAELTIEDEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKW 252
Query: 283 RKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVVYRGSTYQRPSSSKSVHK 104
RK ELVRLKFHE+LAHDM+TAH IVE RT GLV WRSGSVMVV+RG+ Y+ P + V
Sbjct: 253 RKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGSVMVVFRGTNYEGPPKPQPVDG 312
Query: 103 ETVDFFVPDVSSAGHPIMKNDNNAVSASER 14
E FVPDVSS +P M+NDNN E+
Sbjct: 313 EGDSLFVPDVSSVDNPAMRNDNNGGPTLEK 342
>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
Length = 850
Score = 233 bits (593), Expect = 2e-58
Identities = 132/270 (48%), Positives = 160/270 (59%), Gaps = 2/270 (0%)
Frame = -2
Query: 817 KSSAPSWRTTNSPAGKRKLDPDFKDVVENQSENRNGDRGRGAIERIVHRLRNLGLGSXXX 638
KS W + N D K +S +G G AIERIV RLRNLGLGS
Sbjct: 76 KSWINKWPSPNPSIESEHKGIDSKGRDGTESRYFDGRSGTSAIERIVLRLRNLGLGSDDE 135
Query: 637 XXXXXXXXXVNAY--TGEEKLGDLLQRKWSRPDSYIXXXXXXXXXDRMLLPWERGEDERQ 464
+ TG+EKLGDLLQR W RPDS + M+LPWERGE+ ++
Sbjct: 136 DKNEGEVESGDTMPVTGDEKLGDLLQRDWVRPDSMLIEDEDEDD---MILPWERGEERQE 192
Query: 463 VEEGGVLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINIPKAGVTQLIVEKIHDQW 284
E G LK++ V+APT AELTIED RIN+PKAG+TQ ++ KIH++W
Sbjct: 193 EEGDGRLKRRAVRAPTLAELTIEDEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKW 252
Query: 283 RKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVVYRGSTYQRPSSSKSVHK 104
RK ELVRLKFHE+LAHDM+TAH IVE RT GLV WRSGSVMVV+RG+ Y+ P + V
Sbjct: 253 RKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGSVMVVFRGTNYEGPPKPQPVDG 312
Query: 103 ETVDFFVPDVSSAGHPIMKNDNNAVSASER 14
E FVPDVSS +P M+NDNN E+
Sbjct: 313 EGDSLFVPDVSSVDNPAMRNDNNGGPTLEK 342
>ref|XP_010094746.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis] gi|587867514|gb|EXB56911.1| Chloroplastic
group IIA intron splicing facilitator CRS1 [Morus
notabilis]
Length = 838
Score = 231 bits (590), Expect = 5e-58
Identities = 148/353 (41%), Positives = 194/353 (54%), Gaps = 21/353 (5%)
Frame = -2
Query: 1000 LISSIPLRSHCFTYNXXXXXXXXXXXXSLLKPFSSISSALRTT----EHXXXXXXXXXXX 833
L +S+PL SH + N +LK F S+ + R++ +
Sbjct: 14 LRNSLPLTSHSHSLNLLISSSSPNPSFHILKTFCSVKTTERSSYPWKDQNPKPSSSSSSS 73
Query: 832 XNHYKKSSAPSWRTTNSPAGKRKLDPDFKDVVENQSENRNG----------DRGRGAIER 683
+ +K SAP W P ++ + V E+ +R DRGR AIER
Sbjct: 74 SHRHKPPSAP-WLNKWPP-----VESSDRKVAESTDRDRTDRPDTVGYVDRDRGRNAIER 127
Query: 682 IVHRLRNLGLGSXXXXXXXXXXXXV------NAYTGEEKLGDLLQRKWSRPDSYIXXXXX 521
IV RLRNLGLGS TGEEKLGDLL+R+W RPD +
Sbjct: 128 IVLRLRNLGLGSDDEDEDDKEGDIGLDGQDAMPVTGEEKLGDLLRREWIRPDFVLEEEES 187
Query: 520 XXXXDRMLLPWERGEDERQVEEGG-VLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXR 344
+ LPWER E+E+ V+EG L+K+RV APT AELTIED R
Sbjct: 188 KDD---LTLPWEREEEEKGVDEGTRELRKRRVNAPTLAELTIEDEELRRLRRMGMFLRDR 244
Query: 343 INIPKAGVTQLIVEKIHDQWRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSV 164
I++PKAG+TQ ++EKIHD+WRK ELVRLKFHE LAHDM+TAH IVE RT GLV WRSGSV
Sbjct: 245 ISVPKAGLTQAVLEKIHDKWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVTWRSGSV 304
Query: 163 MVVYRGSTYQRPSSSKSVHKETVDFFVPDVSSAGHPIMKNDNNAVSASERRES 5
MVVYRGS Y+ P ++ V+KE F+PDVSSA + + ++ ++ S +E+ E+
Sbjct: 305 MVVYRGSNYEGPPKTQPVNKERDALFIPDVSSAENFLTRSGDSLTSNAEKSET 357
>ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theobroma cacao]
gi|508773778|gb|EOY21034.1| CRS1 / YhbY
domain-containing protein [Theobroma cacao]
Length = 919
Score = 231 bits (590), Expect = 5e-58
Identities = 137/274 (50%), Positives = 175/274 (63%), Gaps = 5/274 (1%)
Frame = -2
Query: 814 SSAPSWRTTNSPAGKR-KLDPDFKDVVENQSENRNGDRGRGAIERIVHRLRNLGLGSXXX 638
+S+ S + +SP+ K + D D K VE + +R D+ + AIERIV RLRNLGLGS
Sbjct: 145 ASSSSLQAWSSPSQKVIQSDGDDKTDVETRYFDR--DKSQSAIERIVLRLRNLGLGSDDE 202
Query: 637 XXXXXXXXXVNA--YTGEEKLGDLLQRKWSRPDSYIXXXXXXXXXDRMLLPWERGEDERQ 464
N+ TGEE+LGDLL+R+W RPD+ + +LPWER E E +
Sbjct: 203 DEGEDETDQYNSTPVTGEERLGDLLKREWVRPDTMLIEREKE----EAVLPWERDEAEVE 258
Query: 463 VEEGGVL--KKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINIPKAGVTQLIVEKIHD 290
V + GVL KK+RV+APT AELTIED RIN+PKAG+TQ ++EKIHD
Sbjct: 259 VVKEGVLGVKKRRVRAPTLAELTIEDEELRRLRRMGMYLRERINVPKAGITQAVLEKIHD 318
Query: 289 QWRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVVYRGSTYQRPSSSKSV 110
+WRK ELVRLKFHE LA DM+TAH IVE RT GLV+WRSGSVMVVYRGS Y+ PS S+S+
Sbjct: 319 KWRKEELVRLKFHEVLATDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYEGPSRSQSI 378
Query: 109 HKETVDFFVPDVSSAGHPIMKNDNNAVSASERRE 8
+E F+PDVSSA + + ++ S E+ E
Sbjct: 379 DREGEALFIPDVSSASNAVRGSETGKTSTPEKCE 412
>ref|XP_008453396.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic [Cucumis melo]
Length = 844
Score = 230 bits (587), Expect = 1e-57
Identities = 133/255 (52%), Positives = 161/255 (63%), Gaps = 8/255 (3%)
Frame = -2
Query: 754 DFKDVVENQSENRNGDRGRGAIERIVHRLRNLGLGSXXXXXXXXXXXXVNAY-------T 596
D D ENQ+E + D+G+ AIERIV RLRNLG+GS Y T
Sbjct: 105 DRTDRAENQTEYLDKDKGQTAIERIVLRLRNLGIGSDDEDEDEEDGDDNGLYSREARLVT 164
Query: 595 GEEKLGDLLQRKWSRPDSYIXXXXXXXXXDRMLLPWERGEDERQVEE-GGVLKKKRVKAP 419
GEE LGDLLQR+W RPD+ + M+LPWER E+ + EE G K++++KAP
Sbjct: 165 GEETLGDLLQREWIRPDASLYSNEDGEDG--MVLPWEREEERGEEEECGRGSKRRKMKAP 222
Query: 418 TYAELTIEDAXXXXXXXXXXXXXXRINIPKAGVTQLIVEKIHDQWRKSELVRLKFHESLA 239
T AELTIED RIN+PKAG+TQ ++EKIH +WRK ELVRLKFHE LA
Sbjct: 223 TLAELTIEDEELRRLRRMGMFIRERINVPKAGITQAVLEKIHGKWRKEELVRLKFHEELA 282
Query: 238 HDMRTAHAIVEDRTRGLVIWRSGSVMVVYRGSTYQRPSSSKSVHKETVDFFVPDVSSAGH 59
HDM+TAH IVE RT GLV+WRSGSVMVVYRGS Y+ PS +K V +E F+PDVSSA
Sbjct: 283 HDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYEGPSKTKPVTREGDGVFIPDVSSAA- 341
Query: 58 PIMKNDNNAVSASER 14
+DN A SA E+
Sbjct: 342 -TSTSDNVAASAPEK 355
>ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prunus persica]
gi|462407043|gb|EMJ12507.1| hypothetical protein
PRUPE_ppa001468mg [Prunus persica]
Length = 820
Score = 229 bits (583), Expect = 4e-57
Identities = 152/350 (43%), Positives = 194/350 (55%), Gaps = 17/350 (4%)
Frame = -2
Query: 1000 LISSIPLRSHCFTYNXXXXXXXXXXXXSLLKPFSSISSALRTTEHXXXXXXXXXXXXNHY 821
L SS+PL SH + + LLKPFSS L+ TEH
Sbjct: 13 LRSSLPLTSHSSS-SLNFLFSASKPSFRLLKPFSS----LKATEHSGNPNAKPSHKS--- 64
Query: 820 KKSSAP---SWRTTNSPAGK--RKLDPDFKD-------VVENQSENRNGDRGRGAIERIV 677
K SAP +W NSPA +K++ + V N + + ++G+ AIERIV
Sbjct: 65 KPPSAPWLNTWPPRNSPAELPCQKVNEKVNESHGRDQAVKANTTRYFDKNKGQSAIERIV 124
Query: 676 HRLRNLGLGSXXXXXXXXXXXXVN-----AYTGEEKLGDLLQRKWSRPDSYIXXXXXXXX 512
RLRNLGLGS A +GEEKLGDLLQR+W RPD +
Sbjct: 125 LRLRNLGLGSDDEEEDDGLGLDGQDSMQPAESGEEKLGDLLQREWVRPDYVLAEQKSND- 183
Query: 511 XDRMLLPWERGEDERQVEEGGVLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINIP 332
+ LPWE+ ++ + EE L+K+RVKAP+ AELTIED RI++P
Sbjct: 184 --EVALPWEKEDEISEEEEVKGLRKRRVKAPSLAELTIEDEELKRLRRMGMVLRERISVP 241
Query: 331 KAGVTQLIVEKIHDQWRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVVY 152
KAG+TQ ++EKIHD WRK ELVRLKFHE LA DM+TAH IVE RT GLV+WRSGSVMVVY
Sbjct: 242 KAGITQAVLEKIHDTWRKEELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRSGSVMVVY 301
Query: 151 RGSTYQRPSSSKSVHKETVDFFVPDVSSAGHPIMKNDNNAVSASERRESS 2
RGS Y+ PS S++V +E F+PDVSSA ++ N+A S + E +
Sbjct: 302 RGSNYKGPSKSQTVDREGGALFIPDVSSAETSATRSGNDATSGPDNNEKA 351
>ref|XP_004138244.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Cucumis sativus]
gi|700208727|gb|KGN63823.1| hypothetical protein
Csa_1G023600 [Cucumis sativus]
Length = 841
Score = 226 bits (575), Expect = 3e-56
Identities = 153/350 (43%), Positives = 187/350 (53%), Gaps = 23/350 (6%)
Frame = -2
Query: 994 SSIPLRSHCFTYNXXXXXXXXXXXXSLLKPFSSISSALRT-TEHXXXXXXXXXXXXNHYK 818
+S PL SH T +L FSS LRT TEH
Sbjct: 15 NSFPLSSHSRTL----LSNHPNFSLQILNTFSS----LRTHTEHSGKRIPKTSHNSAPPS 66
Query: 817 KSSAPSWRTTNSPAGKRKLDP------------DFKDVVENQSENRNGDRGRGAIERIVH 674
SS+ S + P+G + D D D ENQSE + D+G+ AIERIV
Sbjct: 67 SSSSSSSWISKWPSGSSRNDRKVEKKVVRPSRHDRTDRAENQSEYLDKDKGQTAIERIVL 126
Query: 673 RLRNLGLGSXXXXXXXXXXXXVN---------AYTGEEKLGDLLQRKWSRPDSYIXXXXX 521
RLRNLG+GS + TGEE+LGDLLQR+W RPD+ +
Sbjct: 127 RLRNLGIGSDDEDEDEDEEDGEDDGLDSLKARPVTGEERLGDLLQREWIRPDASLVSNED 186
Query: 520 XXXXDRMLLPWERGEDERQVEE-GGVLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXR 344
M+LPWER E+ + EE G LK++ +KAPT AELTIED R
Sbjct: 187 GEDG--MVLPWEREEERGEEEECGRGLKRRNMKAPTLAELTIEDEELRRLRRMGMSIRER 244
Query: 343 INIPKAGVTQLIVEKIHDQWRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSV 164
IN+PKAG TQ ++EKIH +WRK ELVRLKFHE LAHDM+TAH IVE RT GLV+WRSGSV
Sbjct: 245 INVPKAGTTQAVLEKIHGKWRKEELVRLKFHEELAHDMKTAHEIVERRTGGLVLWRSGSV 304
Query: 163 MVVYRGSTYQRPSSSKSVHKETVDFFVPDVSSAGHPIMKNDNNAVSASER 14
MVVYRGS Y+ PS K + ++ F+PDVSSA +DN A S E+
Sbjct: 305 MVVYRGSNYEGPSKIKPLTRDGDGVFIPDVSSA--TTSTSDNVAASVPEK 352
>ref|XP_008240263.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Prunus mume]
Length = 820
Score = 225 bits (574), Expect = 4e-56
Identities = 147/351 (41%), Positives = 193/351 (54%), Gaps = 18/351 (5%)
Frame = -2
Query: 1000 LISSIPLRSHCFTYNXXXXXXXXXXXXSLLKPFSSISSALRTTEHXXXXXXXXXXXXNHY 821
L SS+PL SH + + LLKPFSS L+ TEH H
Sbjct: 13 LRSSLPLTSHSSS-SLNFLFSASKPSFRLLKPFSS----LKATEHSGNPNAKPS----HK 63
Query: 820 KKSSAPSW------RTTNSPAGKRKLDPDFKD-------VVENQSENRNGDRGRGAIERI 680
++ + W R +++ ++K++ + V N + + ++G+ AIERI
Sbjct: 64 SRTPSAPWLNKWPPRNSSAELPRQKVNEKVNESHGRDQAVKANTTRYFDKNKGQSAIERI 123
Query: 679 VHRLRNLGLGSXXXXXXXXXXXXVN-----AYTGEEKLGDLLQRKWSRPDSYIXXXXXXX 515
V RLRNLGLGS A +GEEKLGDLLQR+W RPD +
Sbjct: 124 VLRLRNLGLGSDDEEEDDGLELDGQDSMQPAASGEEKLGDLLQREWVRPDYVLAEQKSND 183
Query: 514 XXDRMLLPWERGEDERQVEEGGVLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINI 335
+ LPWE+ E+ + EE L+K+RVKAP+ AELTIED RI++
Sbjct: 184 ---EVALPWEKEEEISEEEEVKGLRKRRVKAPSLAELTIEDEELKRLRRMGMVLRERISV 240
Query: 334 PKAGVTQLIVEKIHDQWRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVV 155
PKAG+TQ ++EKIHD WRK ELVRLKFHE LA DM+TAH IVE RT GLV+WRSGSVMVV
Sbjct: 241 PKAGITQAVLEKIHDTWRKEELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRSGSVMVV 300
Query: 154 YRGSTYQRPSSSKSVHKETVDFFVPDVSSAGHPIMKNDNNAVSASERRESS 2
YRGS Y+ PS S++V E F+PDVSSA ++ N+A S + E +
Sbjct: 301 YRGSNYKGPSKSQTVDGEGGALFIPDVSSAETSATRSGNDATSGPDNTEKA 351
>ref|XP_009347186.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Pyrus x bretschneideri]
Length = 832
Score = 225 bits (573), Expect = 5e-56
Identities = 141/320 (44%), Positives = 184/320 (57%), Gaps = 21/320 (6%)
Frame = -2
Query: 898 SISSALRTTEHXXXXXXXXXXXXNHYKKSSAPS-----WRTTNSPAGKRKLDPDFKDVVE 734
+ SS++RTTEH H + ++P+ W +SPA + + + K V E
Sbjct: 43 TFSSSVRTTEHGGNPNAKPPQ---HKSRPASPAPWLNKWPNRSSPAELPRQNVNNK-VNE 98
Query: 733 NQSENRNG----------DRGRGAIERIVHRLRNLGLGSXXXXXXXXXXXXVN----AYT 596
+Q ++G D+G+ AIERIV RLRNLGLGS +
Sbjct: 99 SQGREKDGKADSTRYFDKDKGQNAIERIVFRLRNLGLGSDDEGEDDGIGLDGQDSVPVAS 158
Query: 595 GEEKLGDLLQRKWSRPDSYIXXXXXXXXXDRMLLPWERGEDER--QVEEGGVLKKKRVKA 422
GEEKLGDLLQR+W RPD + + LPWE+ E+E EE L+K+R KA
Sbjct: 159 GEEKLGDLLQREWVRPDYVLEEEKSAD---EVALPWEKEEEEEVNDKEEVKGLRKRRGKA 215
Query: 421 PTYAELTIEDAXXXXXXXXXXXXXXRINIPKAGVTQLIVEKIHDQWRKSELVRLKFHESL 242
P+ AELTIED RI++PKAG+TQ ++EKIHD WRK+ELVRLKFHE L
Sbjct: 216 PSLAELTIEDEELKRLRRMGMVLRERISVPKAGITQAVLEKIHDTWRKTELVRLKFHEVL 275
Query: 241 AHDMRTAHAIVEDRTRGLVIWRSGSVMVVYRGSTYQRPSSSKSVHKETVDFFVPDVSSAG 62
A DM+TAH IVE RT GLV+WRSGSVMVVYRGS Y+ PS S++V E F+PDVSSA
Sbjct: 276 ALDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYKGPSQSQTVDGERGGLFIPDVSSAE 335
Query: 61 HPIMKNDNNAVSASERRESS 2
+ ++ N+A S + E +
Sbjct: 336 TSVTRSGNDATSGPDNTEQA 355
>ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Fragaria vesca subsp. vesca]
Length = 820
Score = 225 bits (573), Expect = 5e-56
Identities = 148/351 (42%), Positives = 190/351 (54%), Gaps = 18/351 (5%)
Frame = -2
Query: 1000 LISSIPLRSHCFTYNXXXXXXXXXXXXSLLKPFSSISSALRTTEHXXXXXXXXXXXXNHY 821
L +S+PL SH + +LKPFS ALRTTEH +
Sbjct: 13 LRNSLPLTSH----SPSSLHLLLKPSFRILKPFS----ALRTTEHGGNPNARHKSKPS-- 62
Query: 820 KKSSAPSWRTTNSPAGKRKLDPD---FKDVVE----------NQSENRNGDRGRGAIERI 680
SS W G+ +P F D V+ N + + D+G+ AIERI
Sbjct: 63 SSSSTAPWLNKWPSRGQAPAEPPRQKFSDRVKESDGREKPSSNAARYVDKDKGQSAIERI 122
Query: 679 VHRLRNLGLGSXXXXXXXXXXXXVN---AYTGEEKLGDLLQRKWSRPDSYIXXXXXXXXX 509
V RLRNLGLG ++ A +G EKLGDLLQR+W RPD +
Sbjct: 123 VFRLRNLGLGDDEEEEESGDGVELDSMPAASGAEKLGDLLQREWVRPDYILAEEKGDDD- 181
Query: 508 DRMLLPWERGEDERQVEEG--GVLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINI 335
+ LPWE+ E+E +E G+ K +R KAP+ AELTIED RI++
Sbjct: 182 --VALPWEKEEEELSEDEEVKGMRKARRSKAPSLAELTIEDEELRRLRRLGMVLRERISV 239
Query: 334 PKAGVTQLIVEKIHDQWRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVV 155
PKAG+TQ ++EKIHD+WRK ELVRLKFHE LAHDM+TAH IVE RT GLV+WRSGSVMVV
Sbjct: 240 PKAGITQAVLEKIHDKWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVLWRSGSVMVV 299
Query: 154 YRGSTYQRPSSSKSVHKETVDFFVPDVSSAGHPIMKNDNNAVSASERRESS 2
YRGS Y+ PS S+ + F+PDVSSA + + N+A SA ++ E +
Sbjct: 300 YRGSNYKGPSKSEPAGRGGDALFIPDVSSAETSVTRGGNDATSAPDKTEQA 350
>gb|KHG01961.1| Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Gossypium arboreum]
Length = 823
Score = 224 bits (572), Expect = 7e-56
Identities = 138/273 (50%), Positives = 175/273 (64%), Gaps = 4/273 (1%)
Frame = -2
Query: 814 SSAPSWRTTNSPAGKRKLDPDFKDVVENQSENRNGDRGRGAIERIVHRLRNLGLGSXXXX 635
SS+ S + +SP+ K + D V+ SE R ++G+ AI+RIV RLRNLGLGS
Sbjct: 76 SSSSSLQAWSSPSEK-VIQSDGNGKVD--SETRYLNKGQSAIDRIVLRLRNLGLGSDDED 132
Query: 634 XXXXXXXXVNA--YTGEEKLGDLLQRKWSRPDSYIXXXXXXXXXDRMLLPWERGED--ER 467
N+ GEE+LGDLL+R+W RPD+ + +LPWER E E
Sbjct: 133 EEDDGTDDYNSTPVIGEERLGDLLKREWVRPDTRLIEKEKE----EAVLPWEREEAVVEV 188
Query: 466 QVEEGGVLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINIPKAGVTQLIVEKIHDQ 287
V+EGG+LKK+ VKAPT AELTIED RIN+PKAG+T++++EKIHD+
Sbjct: 189 VVKEGGLLKKRTVKAPTLAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDK 248
Query: 286 WRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVVYRGSTYQRPSSSKSVH 107
WRK ELVRLKFHE LA DMRTAH IVE RT GLVIWRSGSVMVVYRGS Y+ PS S+S
Sbjct: 249 WRKEELVRLKFHEFLAVDMRTAHEIVERRTGGLVIWRSGSVMVVYRGSNYEGPSKSQSGE 308
Query: 106 KETVDFFVPDVSSAGHPIMKNDNNAVSASERRE 8
E + F+PDVSSAG +++ + S SE+ +
Sbjct: 309 GEAL--FIPDVSSAGK--RESETGSASTSEKSD 337
>ref|XP_012440292.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X3 [Gossypium raimondii]
Length = 854
Score = 224 bits (571), Expect = 9e-56
Identities = 138/273 (50%), Positives = 175/273 (64%), Gaps = 4/273 (1%)
Frame = -2
Query: 814 SSAPSWRTTNSPAGKRKLDPDFKDVVENQSENRNGDRGRGAIERIVHRLRNLGLGSXXXX 635
SS+ S + +SP+ K + D + SE R ++G+ AI+RIV RLRNLGLGS
Sbjct: 75 SSSSSLQAWSSPSEK-VIQSDGNGKAD--SETRYLNKGQSAIDRIVLRLRNLGLGSDDED 131
Query: 634 XXXXXXXXVNA--YTGEEKLGDLLQRKWSRPDSYIXXXXXXXXXDRMLLPWERGED--ER 467
N+ TGEE+LGDLL+R+W RPD+ + +LPWER E E
Sbjct: 132 EEDDGTDDYNSTPVTGEERLGDLLKREWVRPDTRLIEKEKE----EAVLPWEREEAVVEV 187
Query: 466 QVEEGGVLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINIPKAGVTQLIVEKIHDQ 287
V+EGG+LKK+ VKAPT AELTIED RIN+PKAG+T++++EKIHD+
Sbjct: 188 VVKEGGLLKKRTVKAPTLAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDK 247
Query: 286 WRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVVYRGSTYQRPSSSKSVH 107
WRK ELVRLKFHE LA DMRTAH IVE RT GLVIWRSGSVMVVYRGS Y+ PS S+S
Sbjct: 248 WRKEELVRLKFHEFLAVDMRTAHEIVERRTGGLVIWRSGSVMVVYRGSNYEGPSKSQSGE 307
Query: 106 KETVDFFVPDVSSAGHPIMKNDNNAVSASERRE 8
E + F+PDVSSAG +++ + S SE+ +
Sbjct: 308 GEAL--FIPDVSSAGK--RESETGSGSTSEKSD 336
>ref|XP_012440291.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X2 [Gossypium raimondii]
Length = 854
Score = 224 bits (571), Expect = 9e-56
Identities = 138/273 (50%), Positives = 175/273 (64%), Gaps = 4/273 (1%)
Frame = -2
Query: 814 SSAPSWRTTNSPAGKRKLDPDFKDVVENQSENRNGDRGRGAIERIVHRLRNLGLGSXXXX 635
SS+ S + +SP+ K + D + SE R ++G+ AI+RIV RLRNLGLGS
Sbjct: 75 SSSSSLQAWSSPSEK-VIQSDGNGKAD--SETRYLNKGQSAIDRIVLRLRNLGLGSDDED 131
Query: 634 XXXXXXXXVNA--YTGEEKLGDLLQRKWSRPDSYIXXXXXXXXXDRMLLPWERGED--ER 467
N+ TGEE+LGDLL+R+W RPD+ + +LPWER E E
Sbjct: 132 EEDDGTDDYNSTPVTGEERLGDLLKREWVRPDTRLIEKEKE----EAVLPWEREEAVVEV 187
Query: 466 QVEEGGVLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINIPKAGVTQLIVEKIHDQ 287
V+EGG+LKK+ VKAPT AELTIED RIN+PKAG+T++++EKIHD+
Sbjct: 188 VVKEGGLLKKRTVKAPTLAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDK 247
Query: 286 WRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVVYRGSTYQRPSSSKSVH 107
WRK ELVRLKFHE LA DMRTAH IVE RT GLVIWRSGSVMVVYRGS Y+ PS S+S
Sbjct: 248 WRKEELVRLKFHEFLAVDMRTAHEIVERRTGGLVIWRSGSVMVVYRGSNYEGPSKSQSGE 307
Query: 106 KETVDFFVPDVSSAGHPIMKNDNNAVSASERRE 8
E + F+PDVSSAG +++ + S SE+ +
Sbjct: 308 GEAL--FIPDVSSAGK--RESETGSGSTSEKSD 336
>ref|XP_012440290.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X1 [Gossypium raimondii]
gi|763785914|gb|KJB52985.1| hypothetical protein
B456_008G286900 [Gossypium raimondii]
Length = 868
Score = 224 bits (571), Expect = 9e-56
Identities = 138/273 (50%), Positives = 175/273 (64%), Gaps = 4/273 (1%)
Frame = -2
Query: 814 SSAPSWRTTNSPAGKRKLDPDFKDVVENQSENRNGDRGRGAIERIVHRLRNLGLGSXXXX 635
SS+ S + +SP+ K + D + SE R ++G+ AI+RIV RLRNLGLGS
Sbjct: 75 SSSSSLQAWSSPSEK-VIQSDGNGKAD--SETRYLNKGQSAIDRIVLRLRNLGLGSDDED 131
Query: 634 XXXXXXXXVNA--YTGEEKLGDLLQRKWSRPDSYIXXXXXXXXXDRMLLPWERGED--ER 467
N+ TGEE+LGDLL+R+W RPD+ + +LPWER E E
Sbjct: 132 EEDDGTDDYNSTPVTGEERLGDLLKREWVRPDTRLIEKEKE----EAVLPWEREEAVVEV 187
Query: 466 QVEEGGVLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINIPKAGVTQLIVEKIHDQ 287
V+EGG+LKK+ VKAPT AELTIED RIN+PKAG+T++++EKIHD+
Sbjct: 188 VVKEGGLLKKRTVKAPTLAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDK 247
Query: 286 WRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVVYRGSTYQRPSSSKSVH 107
WRK ELVRLKFHE LA DMRTAH IVE RT GLVIWRSGSVMVVYRGS Y+ PS S+S
Sbjct: 248 WRKEELVRLKFHEFLAVDMRTAHEIVERRTGGLVIWRSGSVMVVYRGSNYEGPSKSQSGE 307
Query: 106 KETVDFFVPDVSSAGHPIMKNDNNAVSASERRE 8
E + F+PDVSSAG +++ + S SE+ +
Sbjct: 308 GEAL--FIPDVSSAGK--RESETGSGSTSEKSD 336
>ref|XP_011045860.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X2 [Populus euphratica]
Length = 802
Score = 224 bits (570), Expect = 1e-55
Identities = 143/334 (42%), Positives = 182/334 (54%), Gaps = 7/334 (2%)
Frame = -2
Query: 994 SSIPLRSHCFTYNXXXXXXXXXXXXSLLKPFS-SISSALRTTEHXXXXXXXXXXXXNHYK 818
S++PL SH L KPFS + SS+LRT +
Sbjct: 17 STLPLSSHSLLSKIAAFQS-------LKKPFSIATSSSLRTNKTPKT------------- 56
Query: 817 KSSAPSWRTTNSPAGKRKLDPDFKDVVENQSENRNGDRGRGAIERIVHRLRNLGLGSXXX 638
+ P+W + P+ + V + + + D+G+ AIERIV RLRNLGLGS
Sbjct: 57 QQKNPNWISKWKPSQNHSIKNPPSKVSQEKPHYFSNDKGQNAIERIVLRLRNLGLGSDDE 116
Query: 637 XXXXXXXXXV---NAYTGEEKLGDLLQRKWSRPDSYIXXXXXXXXXDRMLLPWERGEDER 467
TGEE+LGDLL+R+W RPD+ + D +LPWER E
Sbjct: 117 DELEGLEGSEINGGGLTGEERLGDLLKREWVRPDTVVFSNDEGSDSDESVLPWEREESGA 176
Query: 466 QVEEGGVL--KKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINIPKAGVTQLIVEKIH 293
EGG+ +K+RVKAPT AELTIED RI+IPKAG+T ++E IH
Sbjct: 177 VEMEGGIESGRKRRVKAPTLAELTIEDEELRRLRRMGMFIRERISIPKAGITNAVLENIH 236
Query: 292 DQWRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVVYRGSTYQRPSSS-K 116
D+WRK ELVRLKFHE LAHDM+TAH IVE RT GLVIWR+GSVMVV+RG+ YQ P S +
Sbjct: 237 DRWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVIWRAGSVMVVFRGTNYQGPPSKLQ 296
Query: 115 SVHKETVDFFVPDVSSAGHPIMKNDNNAVSASER 14
+E FVPDVSS I ++ N A S+SE+
Sbjct: 297 PADREGDALFVPDVSSTDSVITRSSNIATSSSEK 330
>ref|XP_011045859.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic isoform X1 [Populus euphratica]
Length = 806
Score = 224 bits (570), Expect = 1e-55
Identities = 143/334 (42%), Positives = 182/334 (54%), Gaps = 7/334 (2%)
Frame = -2
Query: 994 SSIPLRSHCFTYNXXXXXXXXXXXXSLLKPFS-SISSALRTTEHXXXXXXXXXXXXNHYK 818
S++PL SH L KPFS + SS+LRT +
Sbjct: 17 STLPLSSHSLLSKIAAFQS-------LKKPFSIATSSSLRTNKTPKT------------- 56
Query: 817 KSSAPSWRTTNSPAGKRKLDPDFKDVVENQSENRNGDRGRGAIERIVHRLRNLGLGSXXX 638
+ P+W + P+ + V + + + D+G+ AIERIV RLRNLGLGS
Sbjct: 57 QQKNPNWISKWKPSQNHSIKNPPSKVSQEKPHYFSNDKGQNAIERIVLRLRNLGLGSDDE 116
Query: 637 XXXXXXXXXV---NAYTGEEKLGDLLQRKWSRPDSYIXXXXXXXXXDRMLLPWERGEDER 467
TGEE+LGDLL+R+W RPD+ + D +LPWER E
Sbjct: 117 DELEGLEGSEINGGGLTGEERLGDLLKREWVRPDTVVFSNDEGSDSDESVLPWEREESGA 176
Query: 466 QVEEGGVL--KKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXRINIPKAGVTQLIVEKIH 293
EGG+ +K+RVKAPT AELTIED RI+IPKAG+T ++E IH
Sbjct: 177 VEMEGGIESGRKRRVKAPTLAELTIEDEELRRLRRMGMFIRERISIPKAGITNAVLENIH 236
Query: 292 DQWRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSVMVVYRGSTYQRPSSS-K 116
D+WRK ELVRLKFHE LAHDM+TAH IVE RT GLVIWR+GSVMVV+RG+ YQ P S +
Sbjct: 237 DRWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVIWRAGSVMVVFRGTNYQGPPSKLQ 296
Query: 115 SVHKETVDFFVPDVSSAGHPIMKNDNNAVSASER 14
+E FVPDVSS I ++ N A S+SE+
Sbjct: 297 PADREGDALFVPDVSSTDSVITRSSNIATSSSEK 330
>ref|XP_008374754.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Malus domestica]
Length = 827
Score = 224 bits (570), Expect = 1e-55
Identities = 149/354 (42%), Positives = 197/354 (55%), Gaps = 21/354 (5%)
Frame = -2
Query: 1000 LISSIPLRSHCFTYNXXXXXXXXXXXXSLLKPFSSISSALRTTEHXXXXXXXXXXXXNHY 821
L +S+PL SH + ++K FSS ++RTTEH H
Sbjct: 13 LRNSLPLTSH----SPSSFSLAPKPSFRIVKTFSS---SVRTTEHGGNPNAKPPQ---HK 62
Query: 820 KKSSAPS-----WRTTNSPAGKRKLDPDFKDVVENQSENRNG----------DRGRGAIE 686
+ ++P+ W +SPA + + K V E+Q ++G ++G+ AIE
Sbjct: 63 SRPASPAPWLNKWPNRSSPAELPRQKVNEK-VNESQGREQDGKADSTRYFDKNKGQSAIE 121
Query: 685 RIVHRLRNLGLGSXXXXXXXXXXXXVN----AYTGEEKLGDLLQRKWSRPDSYIXXXXXX 518
RIV RLRNL LGS A +GEEKLGDLLQR+W RPD +
Sbjct: 122 RIVFRLRNLRLGSDDEEEDDGIGLDGQDSVPAASGEEKLGDLLQREWVRPDYVLEEEKSA 181
Query: 517 XXXDRMLLPWERGEDER--QVEEGGVLKKKRVKAPTYAELTIEDAXXXXXXXXXXXXXXR 344
+ LPWE+ E+E EE L+K+R KAP+ AELTIED R
Sbjct: 182 D---EVALPWEKEEEEEVNDKEEVKGLRKRRGKAPSLAELTIEDEELKRLRRMGMVLRER 238
Query: 343 INIPKAGVTQLIVEKIHDQWRKSELVRLKFHESLAHDMRTAHAIVEDRTRGLVIWRSGSV 164
I++PKAG+TQ ++EKIHD WRK+ELVRLKFHE LA DM+TAH IVE RT GLV+WRSGSV
Sbjct: 239 ISVPKAGITQAVLEKIHDTWRKTELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRSGSV 298
Query: 163 MVVYRGSTYQRPSSSKSVHKETVDFFVPDVSSAGHPIMKNDNNAVSASERRESS 2
MVVYRGS Y+ PS S++V E F+PDVSSA +M++ N+A S ++ E +
Sbjct: 299 MVVYRGSNYKGPSQSQTVDGERGGLFIPDVSSAETSVMRSGNDATSGPDKTEQA 352