BLASTX nr result

ID: Papaver29_contig00006329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00006329
         (1165 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010490137.1| PREDICTED: F-box protein At1g11270-like [Cam...    62   9e-07
ref|XP_010468500.1| PREDICTED: F-box protein At1g11270-like [Cam...    62   1e-06

>ref|XP_010490137.1| PREDICTED: F-box protein At1g11270-like [Camelina sativa]
          Length = 383

 Score = 62.0 bits (149), Expect = 9e-07
 Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
 Frame = -2

Query: 1062 EVLTVGENTWRRIDAVPPYRVGIGREELAKPVYVNGNIYWRFRYVRKGEVIMGFDFGTES 883
            EV     N WR +    PYR+        KPVY++G++YW F   ++ EV + F+  TE+
Sbjct: 201  EVFDFSTNAWRFVVPTSPYRINAHH----KPVYLDGSLYW-FTECKEPEV-LSFNLHTET 254

Query: 882  FRVIPIPEFYTGEDPEDDFKSFQPIELMEFHGRIAVLDRVWGYESALWAMQEDAGGNIEW 703
            F+V+    F    DP         + +   H R+ V ++ W  +  +W+      GN  W
Sbjct: 255  FQVVCKAPFAYRCDP-------LQLTMCVLHDRLCVSEKKWPTQ-VIWSFDSSGSGNKTW 306

Query: 702  KDE-EIYIPYTWNVRRDPSVA----ALTGTSHIFIQ-PEYTDSIFYYNLDTKKY 559
            K    I +  T +  + P++A    A+     + +Q P++ + +  YNL +K Y
Sbjct: 307  KKLCSIDLTLTLSWFKKPALALSPIAILEKKRLLLQGPDWVEPLVTYNLRSKCY 360


>ref|XP_010468500.1| PREDICTED: F-box protein At1g11270-like [Camelina sativa]
          Length = 346

 Score = 61.6 bits (148), Expect = 1e-06
 Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
 Frame = -2

Query: 1062 EVLTVGENTWRRIDAVPPYRVGIGREELAKPVYVNGNIYWRFRYVRKGEVIMGFDFGTES 883
            EV     N WR +    PYR+        KPVY++G++YW      +  +++ F+  TE+
Sbjct: 126  EVFDFCSNAWRFVVPASPYRINAHH----KPVYLDGSLYWFTEC--EEPMVLSFNLHTET 179

Query: 882  FRVIPIPEFYTGEDPEDDFKSFQPIELMEFHGRIAVLDRVWGYESALWAMQEDAGGNIEW 703
            F+V+    F    DP         + +   + R+ V ++ W  +  +W+      GN  W
Sbjct: 180  FQVVCKAPFAYRCDP-------LQLTMCVLNNRLCVSEKKWPTQ-VIWSFDSSGSGNKTW 231

Query: 702  KDE-EIYIPYTWNVRRDPSVA----ALTGTSHIFIQ-PEYTDSIFYYNLDTK--KYLRFP 547
            K    I +  T +  ++P++A    A+     + +Q P++ D +  YNL +K  K L  P
Sbjct: 232  KKLCSIDLTLTVSYFKEPALALSPIAILEKKRLLLQGPDWVDPLVTYNLHSKCYKLLYKP 291

Query: 546  ISP 538
            I P
Sbjct: 292  IKP 294


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