BLASTX nr result
ID: Papaver29_contig00006198
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00006198
(1868 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-... 602 e-169
ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB ... 597 e-167
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-... 591 e-166
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-... 588 e-165
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr... 586 e-164
gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sin... 585 e-164
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ... 582 e-163
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ... 578 e-162
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac... 578 e-162
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ... 577 e-161
ref|XP_009377635.1| PREDICTED: RNA polymerase sigma factor sigB ... 567 e-158
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-... 562 e-157
gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arbor... 562 e-157
ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB ... 560 e-156
ref|XP_008392513.1| PREDICTED: RNA polymerase sigma factor sigB ... 560 e-156
gb|KDO49416.1| hypothetical protein CISIN_1g007404mg [Citrus sin... 559 e-156
ref|XP_010097670.1| RNA polymerase sigma factor rpoD [Morus nota... 558 e-156
ref|XP_009377636.1| PREDICTED: RNA polymerase sigma factor sigB ... 556 e-155
ref|XP_004154029.1| PREDICTED: RNA polymerase sigma factor sigB ... 554 e-154
ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-... 553 e-154
>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
Length = 572
Score = 602 bits (1553), Expect = e-169
Identities = 337/562 (59%), Positives = 393/562 (69%), Gaps = 6/562 (1%)
Frame = -1
Query: 1736 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS---AV 1566
MACLLPQF C+PD + K R +C R QC+L+TTTA+ V
Sbjct: 1 MACLLPQF-KCSPDTLSIHFKTHQHQHHYSNNSQLKARDLLCFRTQCILSTTTATMTTTV 59
Query: 1565 VDMENLQLPSLEAHLRSLAMDRSMSYVGSVGP-TKENIEDTVATETXXXXXXXXXXXXXX 1389
VD E L++PSLEAHL S+ DR ++Y+G++ P TK E T+ATE
Sbjct: 60 VDDEKLRMPSLEAHLISVPADRPLTYIGAIDPPTKAKFEATLATEPLITGDEALIAAAAV 119
Query: 1388 XXXXXXXXXXXXXXXA-FMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSLLGLQ 1212
A M N ++ D + + ++ T + E+ +
Sbjct: 120 EAVALAKAAVEIAKDAALMVSTNPSSKSDKWPPDIPSELDTYWHETAQLNEIEQVDMVHH 179
Query: 1211 PLQAESRTEEEEIIPVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXXXX 1032
L AESR +E D D L+PTDEEL+LLQ+QL+ IAVRSGRQTE
Sbjct: 180 SLGAESRPKE-------DSDYLDPTDEELKLLQMQLSKSIAVRSGRQTERRARRARAAEK 232
Query: 1031 XXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVXXX 855
K + +Q+VDY+DPLRYLRGTTS+SRLLTA EEL+ SEGIQ
Sbjct: 233 VAANVVAVKSGSSSRKKRSALQDVDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQDLLK 292
Query: 854 XXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKN 675
ER GG+PT AQWAAAAG+DQKTLRKRLNYGILCKDKMIKSNIRLVISIAKN
Sbjct: 293 LEKLYEELAERYGGQPTFAQWAAAAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKN 352
Query: 674 YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 495
YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 353 YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 412
Query: 494 FHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQKFGI 315
FHMVEATYRV+EARKQL++E GR PD++E+AEATGLSMKRL AVLLTPKAPRSLDQK GI
Sbjct: 413 FHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGI 472
Query: 314 NESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGRMKTL 135
N++LKPSE+I++PD ET+E++L+K+FM+QDLEKVL +LNPREKQV+RWRFGLEDGRMKTL
Sbjct: 473 NQNLKPSEVIADPDAETTEELLMKKFMKQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTL 532
Query: 134 QEIGELMGVSRERIRQIESCAF 69
QEIGELMGVSRERIRQIESCAF
Sbjct: 533 QEIGELMGVSRERIRQIESCAF 554
>ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB [Jatropha curcas]
gi|802585247|ref|XP_012070323.1| PREDICTED: RNA
polymerase sigma factor sigB [Jatropha curcas]
gi|643732514|gb|KDP39610.1| hypothetical protein
JCGZ_02630 [Jatropha curcas]
Length = 577
Score = 597 bits (1539), Expect = e-167
Identities = 336/562 (59%), Positives = 388/562 (69%), Gaps = 6/562 (1%)
Frame = -1
Query: 1736 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTT---TASAV 1566
M+CLLPQF C PD K+R+PVC RAQC+L+TT T++AV
Sbjct: 1 MSCLLPQF-KCQPDTFSIHFRTHYLQNSNFCQSA-KSREPVCFRAQCILSTTSPSTSTAV 58
Query: 1565 VDMENLQLPSLEAHLRSLAMDRSMSYVGSVGPTKENIEDTVATETXXXXXXXXXXXXXXX 1386
+D+E L+LPS EAH SL + +YVGS+GP KE T+ATET
Sbjct: 59 LDLEKLRLPSFEAHPDSLVANSPWTYVGSIGPPKETFGSTLATETLITGDDAVIAAAAAE 118
Query: 1385 XXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSLLGLQPL 1206
A + + + +E P + +T+ +R+ + +
Sbjct: 119 AVALARAAAKVAKDAAILVKSFPSSEAESKLEI-PSIADVSSRWPQFTETDRARIIGDSV 177
Query: 1205 QAESRTEEEEII--PVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXXXX 1032
AE+ + EE + P + D LEPT EELELLQ QL+ IAVRS RQTE
Sbjct: 178 TAETGSREEHPMQHPTKESDHLEPTHEELELLQKQLSEGIAVRSRRQTERKERRTRAAEK 237
Query: 1031 XXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVXXX 855
K P+QEVDY+DPLRYLRGTTS+S+LLTA EEL+LSEGIQ
Sbjct: 238 AAANVMSWKSGSTSKKKRGPLQEVDYSDPLRYLRGTTSTSKLLTATEELELSEGIQDLLK 297
Query: 854 XXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKN 675
ERCGG+PT QWAAAAGVDQKTLR RLNYGI CKD+MIKSNIRLVISIAKN
Sbjct: 298 LERLHEELAERCGGQPTFQQWAAAAGVDQKTLRTRLNYGISCKDRMIKSNIRLVISIAKN 357
Query: 674 YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 495
YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 358 YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 417
Query: 494 FHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQKFGI 315
FHMVEATYRVKEARKQL++E GR PDD+E+AEATGLSMKRL AVLLTPKAPRSLDQK GI
Sbjct: 418 FHMVEATYRVKEARKQLYSENGRYPDDEEVAEATGLSMKRLSAVLLTPKAPRSLDQKIGI 477
Query: 314 NESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGRMKTL 135
N LKPSEII++PD ET+ED+L+KQFM+QDLEKVL +L+PRE QV+RWRFGLEDGR+KTL
Sbjct: 478 NMDLKPSEIIADPDAETAEDLLMKQFMKQDLEKVLDSLSPRENQVIRWRFGLEDGRIKTL 537
Query: 134 QEIGELMGVSRERIRQIESCAF 69
QEIGE+MGVSRERIRQIES AF
Sbjct: 538 QEIGEIMGVSRERIRQIESSAF 559
>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
nucifera]
Length = 584
Score = 591 bits (1524), Expect = e-166
Identities = 331/567 (58%), Positives = 393/567 (69%), Gaps = 11/567 (1%)
Frame = -1
Query: 1736 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYL---FKTRQPVCIRAQCVLTTTTAS-- 1572
MACLLPQF C+PD K+R + + QCVL+TTT +
Sbjct: 1 MACLLPQF-KCSPDTISIHFRTHQLQHHKHHHCNNNHSKSRDLLSFQTQCVLSTTTTAMT 59
Query: 1571 -AVVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGP-TKENIEDTVATETXXXXXXXXXXX 1398
+VD+E L++PSLE+H S+A DR +SY+G+ GP TK + E T+A E+
Sbjct: 60 TTLVDVEKLRMPSLESHSISVASDRPLSYIGATGPPTKASFEATLAMESLITGDEALIAA 119
Query: 1397 XXXXXXXXXXXXXXXXXXA-FMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSLL 1221
A M D S + ++ +F ++ L T+ +
Sbjct: 120 AAAEAVALAKEAVEVAKDAALMVNDKSSSESENGPSDFSSESHIFRLEKAQLTETQEVGR 179
Query: 1220 GLQPLQAESRTEEEEIIPVT--DCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 1047
+ ESR EEE+ + + D D L+ +DEE +LLQ+QL IAVRSGRQTE
Sbjct: 180 IDHSVGLESRQEEEQSVQFSNKDSDGLDSSDEEFKLLQMQLLKSIAVRSGRQTERQARRA 239
Query: 1046 XXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 870
+ A +Q++DY+DPLRYLRGTTS+SRLLTA EEL+LSEGI
Sbjct: 240 RAMEKASTNVLSVKSGHSSRKRRAALQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGI 299
Query: 869 QVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 690
Q ERCGG+PT AQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI
Sbjct: 300 QDLLKLEKLHEELAERCGGQPTFAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 359
Query: 689 SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 510
SIAKNYQGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR
Sbjct: 360 SIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 419
Query: 509 TIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLD 330
TIRLPFHMVEATYRV+EA+KQL++E GR PD++E+AEATGLSMKRL AVLLTPKAP SLD
Sbjct: 420 TIRLPFHMVEATYRVREAKKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLD 479
Query: 329 QKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDG 150
QK G+N+ +KPSEII++PD ET+E++LIKQFM+QDLEKVL +LNPREKQV+RWRFG+EDG
Sbjct: 480 QKIGMNQDMKPSEIIADPDAETAEELLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDG 539
Query: 149 RMKTLQEIGELMGVSRERIRQIESCAF 69
RMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 540 RMKTLQEIGELMGVSRERIRQIESCAF 566
>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
sinensis]
Length = 605
Score = 588 bits (1517), Expect = e-165
Identities = 335/572 (58%), Positives = 394/572 (68%), Gaps = 11/572 (1%)
Frame = -1
Query: 1751 SLKVGMACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS 1572
S M+CLLPQF C PD + K+++P+C R CVL+TT+ S
Sbjct: 19 SFNKNMSCLLPQF-KCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSPS 76
Query: 1571 A------VVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGP-TKENIEDTVATETXXXXXX 1413
V+D+E L+LPSLEAH ++A +R +Y G+VGP T+EN+ ++ATET
Sbjct: 77 TSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEA 136
Query: 1412 XXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKH-VEFQPKTESIHLGTVHYTDA 1236
A M ++ A+ K + T + + T+
Sbjct: 137 VIAAASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQL--TER 194
Query: 1235 ERSLLGLQPLQAESRTEEE--EIIPVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEX 1062
ER+ + + E+ EEE E P+ LEPT EEL+LL+ Q++ IAVRS RQTE
Sbjct: 195 ERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTER 254
Query: 1061 XXXXXXXXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQ 885
K P +QEVDY+DPLRYLR TTSSSRLLTANEE+Q
Sbjct: 255 KARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQ 314
Query: 884 LSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSN 705
LS GIQ ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SN
Sbjct: 315 LSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSN 374
Query: 704 IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSL 525
IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSL
Sbjct: 375 IRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSL 434
Query: 524 SDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKA 345
SDQSRTIRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLLTPKA
Sbjct: 435 SDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKA 494
Query: 344 PRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRF 165
PRSLDQKFGIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRF
Sbjct: 495 PRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRF 554
Query: 164 GLEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
GLEDGRMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 555 GLEDGRMKTLQEIGELMGVSRERIRQIESSAF 586
>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
gi|557539534|gb|ESR50578.1| hypothetical protein
CICLE_v10030998mg [Citrus clementina]
Length = 605
Score = 586 bits (1510), Expect = e-164
Identities = 333/571 (58%), Positives = 391/571 (68%), Gaps = 10/571 (1%)
Frame = -1
Query: 1751 SLKVGMACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS 1572
S M+CLLPQF C PD + K+++P+C R CVL+TT+ S
Sbjct: 19 SFNKNMSCLLPQF-KCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSPS 76
Query: 1571 A------VVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGP-TKENIEDTVATETXXXXXX 1413
V+D+E L+LPSLEAH ++A +R +Y G+VGP T+EN+ ++ATET
Sbjct: 77 TSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEA 136
Query: 1412 XXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAE 1233
A M ++ A+ K S + T+ E
Sbjct: 137 VIAAASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTSTSMWA-QLTERE 195
Query: 1232 RSLLGLQPLQAESRTEEE--EIIPVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXX 1059
R+ + + E+ EEE E P+ LEPT EEL+LL+ Q++ IAVRS RQTE
Sbjct: 196 RASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERK 255
Query: 1058 XXXXXXXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQL 882
K P +QEVDY+DPLRYLR TTSSSRLLTANEE+QL
Sbjct: 256 ARRTRAAEKAAANVMSVKSGSTTRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQL 315
Query: 881 SEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNI 702
S GIQ ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNI
Sbjct: 316 SAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNI 375
Query: 701 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS 522
RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS
Sbjct: 376 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS 435
Query: 521 DQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAP 342
DQSRTIRLPFHMVEATYRVKEARKQL++E GR P+++E+A+ATGLSMKRL AVLL PKAP
Sbjct: 436 DQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAKATGLSMKRLHAVLLAPKAP 495
Query: 341 RSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFG 162
RSLDQKFGIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRFG
Sbjct: 496 RSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFG 555
Query: 161 LEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
LEDGRMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 556 LEDGRMKTLQEIGELMGVSRERIRQIESSAF 586
>gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
Length = 605
Score = 585 bits (1508), Expect = e-164
Identities = 332/571 (58%), Positives = 391/571 (68%), Gaps = 10/571 (1%)
Frame = -1
Query: 1751 SLKVGMACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS 1572
S M+CLLPQF C PD + K+++P+C R CVL+TT+ S
Sbjct: 19 SFNKNMSCLLPQF-KCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSPS 76
Query: 1571 A------VVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGP-TKENIEDTVATETXXXXXX 1413
V+D+E L+LPSLEAH ++A +R +Y G+VGP T+EN+ ++ATET
Sbjct: 77 TSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEA 136
Query: 1412 XXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAE 1233
A M ++ A+ K + + T+ E
Sbjct: 137 VIAAASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISSSADTNTSMWA-QLTERE 195
Query: 1232 RSLLGLQPLQAESRTEEE--EIIPVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXX 1059
R+ + + E+ EEE E P+ LEPT EEL+LL+ Q++ IAVRS RQTE
Sbjct: 196 RASIIGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERK 255
Query: 1058 XXXXXXXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQL 882
K P +QEVDY+DPLRYLR TTSSSRLLTANEE+QL
Sbjct: 256 ARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQL 315
Query: 881 SEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNI 702
S GIQ ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNI
Sbjct: 316 SAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNI 375
Query: 701 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS 522
RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS
Sbjct: 376 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS 435
Query: 521 DQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAP 342
DQSRTIRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLL+PKAP
Sbjct: 436 DQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLSPKAP 495
Query: 341 RSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFG 162
RSLDQK GIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRFG
Sbjct: 496 RSLDQKIGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFG 555
Query: 161 LEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
LEDGRMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 556 LEDGRMKTLQEIGELMGVSRERIRQIESSAF 586
>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
grandis] gi|629111779|gb|KCW76739.1| hypothetical protein
EUGRSUZ_D01094 [Eucalyptus grandis]
Length = 588
Score = 582 bits (1501), Expect = e-163
Identities = 337/568 (59%), Positives = 385/568 (67%), Gaps = 13/568 (2%)
Frame = -1
Query: 1733 ACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTASA----- 1569
+CLLPQF C PD + K R+ RAQC+L+ T+ S
Sbjct: 15 SCLLPQF-KCQPDTFSIQFRT----------HAQKNRETTYFRAQCLLSATSPSTLSSAA 63
Query: 1568 ---VVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGPTKE-NIEDTVATETXXXXXXXXXX 1401
V+DME L+LPSLE S +R +Y G+VGP E N+ T+ATET
Sbjct: 64 TAVVLDMEKLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIA 123
Query: 1400 XXXXXXXXXXXXXXXXXXXA-FMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSL 1224
A M + S + +D+K +E +T + + E S
Sbjct: 124 AAASEAVTLAKAALKSAKHAALMIRNESSSNIDNK-LELSSRTSTSLSKHAELLELEHSN 182
Query: 1223 LGLQPLQAESRTEEEEIIPVTD--CDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXX 1050
+ + ++ E E ++ + + LEPT EEL+LLQVQL IAVRS RQTE
Sbjct: 183 ILTELMEPEGGLREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIR 242
Query: 1049 XXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEG 873
K A +QEVDY+DPLRYLRGTTSSSRLLTA EE +LSEG
Sbjct: 243 ERAAEKAAANVVSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEG 302
Query: 872 IQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLV 693
IQ ERCGG+P AQWAAAAGVDQKTLRKRLNYG LCKDKMIKSNIRLV
Sbjct: 303 IQDLLKLERLQVELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLV 362
Query: 692 ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 513
ISIAKNYQGAGMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 363 ISIAKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 422
Query: 512 RTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSL 333
RTIRLPFHMVEATYRVKEARKQL++E GRQPD++E+AEATGLSMKRL AVL+TPKAPRSL
Sbjct: 423 RTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSL 482
Query: 332 DQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLED 153
DQK GIN++LKPSE+I++P+ ETSED+L+KQFMRQDLEKVL TLNPREKQVVRWRFGLED
Sbjct: 483 DQKIGINQNLKPSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLED 542
Query: 152 GRMKTLQEIGELMGVSRERIRQIESCAF 69
GRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 543 GRMKTLQEIGELMGVSRERIRQIESCAF 570
>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
gi|296090195|emb|CBI40014.3| unnamed protein product
[Vitis vinifera]
Length = 575
Score = 578 bits (1491), Expect = e-162
Identities = 330/567 (58%), Positives = 384/567 (67%), Gaps = 11/567 (1%)
Frame = -1
Query: 1736 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTT------A 1575
M+CLLPQF C PD L K R+ + R QC L+TT+
Sbjct: 1 MSCLLPQF-KCPPDTFSTHPKLHI---------LSKNREAIYFRVQCALSTTSPPLSTST 50
Query: 1574 SAVVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGP-TKENIEDTVATETXXXXXXXXXXX 1398
+AV+D+E L+LPSLE+H S+A R +Y+G VGP T+ N E T+A ET
Sbjct: 51 TAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAA 110
Query: 1397 XXXXXXXXXXXXXXXXXXAF-MGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAER-SL 1224
A + G N+ A+ + K F ++ + +T+ ER +
Sbjct: 111 AAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGI 170
Query: 1223 LGLQPLQAESRTEEEEIIPVT-DCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 1047
LG + + VT D D LEPT EELELL+ + + I VRS RQ E
Sbjct: 171 LGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRA 230
Query: 1046 XXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 870
K +QEVDY+DPLRYLRGTTS+SRLLTA EEL+LSEGI
Sbjct: 231 RAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGI 290
Query: 869 QVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 690
Q ER G KPT AQWAAAAGVDQKTLR+R NYGI CKDKMIKSNIRLVI
Sbjct: 291 QDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVI 350
Query: 689 SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 510
SIAKNYQGAGMN+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR
Sbjct: 351 SIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 410
Query: 509 TIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLD 330
TIRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLLTPKAPRSLD
Sbjct: 411 TIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLD 470
Query: 329 QKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDG 150
QK GIN++LKPSE+I++PD ET+E++LIKQFMR+DLEKVL +LNPREKQV+RWR+GLEDG
Sbjct: 471 QKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDG 530
Query: 149 RMKTLQEIGELMGVSRERIRQIESCAF 69
R KTLQEIGELMGVSRERIRQIESCAF
Sbjct: 531 RTKTLQEIGELMGVSRERIRQIESCAF 557
>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit 2
[Theobroma cacao]
Length = 623
Score = 578 bits (1491), Expect = e-162
Identities = 322/541 (59%), Positives = 383/541 (70%), Gaps = 18/541 (3%)
Frame = -1
Query: 1637 LFKTRQPVCIRAQCVLTTT------TASAVVDMENLQLPSLEAHLRSLAMDRSMSYVGSV 1476
L K ++ +C R QCVL+TT TA+AV+D+E L+LPS EAH S+A+DR +Y+G+
Sbjct: 62 LAKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWTYIGAT 121
Query: 1475 GPTKE-NIEDTVATETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHK 1299
GP E ++ T+AT+ A + +N +
Sbjct: 122 GPPSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENYNYAKTEM 181
Query: 1298 HVEFQPKTESIHLGTVHYTDAERS-LLGLQPL-QAESRTEEEEIIPVTDCDSLEPTDEEL 1125
T+S +T+AER+ ++G P ++E ++ E T+ D LEPT+EEL
Sbjct: 182 KSGVSFATDSFTSKWALFTEAERAGIIGDSPTDESEMEEDDSEQNSTTESDELEPTNEEL 241
Query: 1124 ELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADP 948
E L+ QL+ IAVRS RQTE + +Q+VDY+DP
Sbjct: 242 EHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVDYSDP 301
Query: 947 LRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQ 768
LRYLRGTTS+SRLLTANEEL+LSEGIQ ERCGG+PT AQWAAAAGVDQ
Sbjct: 302 LRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGVDQ 361
Query: 767 KTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDAS 588
KTLR RLNYG+ CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDAS
Sbjct: 362 KTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDAS 421
Query: 587 KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKE 408
KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++E GR PD++E
Sbjct: 422 KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDNEE 481
Query: 407 IAEATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPS--------EIISNPDDETSEDI 252
+AEATGLSMKRL AVLLTPKAPRSLDQK GIN++LKPS E+I++P+ ET+ED+
Sbjct: 482 VAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIADPEAETAEDM 541
Query: 251 LIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCA 72
LIKQFMR+DLEKVL +L+ RE+QV+RWRFG+EDGRMKTLQEIGELMGVSRERIRQIESCA
Sbjct: 542 LIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCA 601
Query: 71 F 69
F
Sbjct: 602 F 602
>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
grandis]
Length = 601
Score = 577 bits (1487), Expect = e-161
Identities = 328/534 (61%), Positives = 374/534 (70%), Gaps = 13/534 (2%)
Frame = -1
Query: 1631 KTRQPVCIRAQCVLTTTTASA--------VVDMENLQLPSLEAHLRSLAMDRSMSYVGSV 1476
K R+ RAQC+L+ T+ S V+DME L+LPSLE S +R +Y G+V
Sbjct: 51 KNRETTYFRAQCLLSATSPSTLSSAATAVVLDMEKLRLPSLEVLTDSPTSNRPWTYTGAV 110
Query: 1475 GPTKE-NIEDTVATETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-FMGGDNSDARLDH 1302
GP E N+ T+ATET A M + S + +D+
Sbjct: 111 GPPAEVNLGATLATETLLTSDEAVIAAAASEAVTLAKAALKSAKHAALMIRNESSSNIDN 170
Query: 1301 KHVEFQPKTESIHLGTVHYTDAERSLLGLQPLQAESRTEEEEIIPVTD--CDSLEPTDEE 1128
K +E +T + + E S + + ++ E E ++ + + LEPT EE
Sbjct: 171 K-LELSSRTSTSLSKHAELLELEHSNILTELMEPEGGLREGNVMQYSTDKSEDLEPTHEE 229
Query: 1127 LELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYAD 951
L+LLQVQL IAVRS RQTE K A +QEVDY+D
Sbjct: 230 LQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAAANVVSVKSGSLSKKKRAALQEVDYSD 289
Query: 950 PLRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVD 771
PLRYLRGTTSSSRLLTA EE +LSEGIQ ERCGG+P AQWAAAAGVD
Sbjct: 290 PLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERCGGEPAFAQWAAAAGVD 349
Query: 770 QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA 591
QKTLRKRLNYG LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG EKFDA
Sbjct: 350 QKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGCEKFDA 409
Query: 590 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDK 411
SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++E GRQPD++
Sbjct: 410 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNE 469
Query: 410 EIAEATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMR 231
E+AEATGLSMKRL AVL+TPKAPRSLDQK GIN++LKPSE+I++P+ ETSED+L+KQFMR
Sbjct: 470 EVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIADPNAETSEDVLLKQFMR 529
Query: 230 QDLEKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
QDLEKVL TLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 530 QDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 583
>ref|XP_009377635.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Pyrus x
bretschneideri]
Length = 643
Score = 567 bits (1462), Expect = e-158
Identities = 313/534 (58%), Positives = 374/534 (70%), Gaps = 13/534 (2%)
Frame = -1
Query: 1631 KTRQPVCIRAQCVLTTTTASA------VVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGP 1470
KTR P+C RAQ +L+TT+ S V+D+E L+LPSLE + SLA R +Y G++GP
Sbjct: 93 KTRDPLCFRAQYILSTTSHSTSTATTTVLDLERLRLPSLEVNSDSLASSRPWTYTGAIGP 152
Query: 1469 -TKENIEDTVATETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFM---GGDNSDARLDH 1302
T+ N T+ATET M N A+ +
Sbjct: 153 LTEANFGATLATETLLTSEEAVIEAAAAEAVTLAKAALKVAKDVAMLVSSSTNHSAKPES 212
Query: 1301 KHVEFQPKTESIHLGTVHYTDAERSLLGLQPLQAESRTEEEEIIP--VTDCDSLEPTDEE 1128
P+T+++H + + E+ + AE+ E+ I + + + +E T EE
Sbjct: 213 SS-PVSPETKALHFNWAQHMETEQVSRVGASMGAETAFVEDHFIQSAIKELEEVEQTYEE 271
Query: 1127 LELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYAD 951
ELLQ QL+ I +S RQTE K + +QE+D++D
Sbjct: 272 FELLQEQLSKGITAKSSRQTERKARRAKAAEKAAASVVSVKSGSATRKKRSSVQEIDHSD 331
Query: 950 PLRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVD 771
PLRYLR TT +SRLLTANEE++ SEGIQ +RCGG+PT+AQWAAAAGVD
Sbjct: 332 PLRYLRSTTHTSRLLTANEEIEFSEGIQELLKLEKLHEELAQRCGGQPTIAQWAAAAGVD 391
Query: 770 QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA 591
QKTLRKR+NYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
Sbjct: 392 QKTLRKRVNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA 451
Query: 590 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDK 411
SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA+KQL++ GR P+D+
Sbjct: 452 SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSLNGRHPNDE 511
Query: 410 EIAEATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMR 231
E+AEATGLSMKRL AVLLTPKAPRSL+QK GIN++LKPSE+IS+PD ET+ED+L+K+FM+
Sbjct: 512 EVAEATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVISDPDAETAEDLLMKKFMK 571
Query: 230 QDLEKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
QDLEKVL +LN REKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 572 QDLEKVLDSLNTREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 625
>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
sinensis]
Length = 525
Score = 562 bits (1449), Expect = e-157
Identities = 314/507 (61%), Positives = 366/507 (72%), Gaps = 5/507 (0%)
Frame = -1
Query: 1574 SAVVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGP-TKENIEDTVATETXXXXXXXXXXX 1398
+ V+D+E L+LPSLEAH ++A +R +Y G+VGP T+EN+ ++ATET
Sbjct: 2 TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 61
Query: 1397 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKH-VEFQPKTESIHLGTVHYTDAERSLL 1221
A M ++ A+ K + T + + T+ ER+ +
Sbjct: 62 SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQL--TERERASI 119
Query: 1220 GLQPLQAESRTEEE--EIIPVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 1047
+ E+ EEE E P+ LEPT EEL+LL+ Q++ IAVRS RQTE
Sbjct: 120 IGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRT 179
Query: 1046 XXXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 870
K P +QEVDY+DPLRYLR TTSSSRLLTANEE+QLS GI
Sbjct: 180 RAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGI 239
Query: 869 QVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 690
Q ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVI
Sbjct: 240 QDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVI 299
Query: 689 SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 510
SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR
Sbjct: 300 SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 359
Query: 509 TIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLD 330
TIRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLLTPKAPRSLD
Sbjct: 360 TIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLD 419
Query: 329 QKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDG 150
QKFGIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRFGLEDG
Sbjct: 420 QKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDG 479
Query: 149 RMKTLQEIGELMGVSRERIRQIESCAF 69
RMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 480 RMKTLQEIGELMGVSRERIRQIESSAF 506
>gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
Length = 578
Score = 562 bits (1448), Expect = e-157
Identities = 317/566 (56%), Positives = 387/566 (68%), Gaps = 10/566 (1%)
Frame = -1
Query: 1736 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS----- 1572
M+CLLPQF C PD K ++ +C R+QCVL+TT+++
Sbjct: 1 MSCLLPQF-KCQPDTFSIQFRAHHSHHS-------KHKESICFRSQCVLSTTSSTSTATT 52
Query: 1571 AVVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGPTKE-NIEDTVATETXXXXXXXXXXXX 1395
AV+D+E L+LPS EAH S+ DR +Y G+ GP E + T+ATE
Sbjct: 53 AVLDVEKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAA 112
Query: 1394 XXXXXXXXXXXXXXXXXA-FMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSLLG 1218
A M ++S A+ + K T+++ +T+AER+ +
Sbjct: 113 AAEAVALARAAAKVAKDAAIMVKNHSSAKTEMKSPG-SSATDTLTSKWGLFTEAERAGIV 171
Query: 1217 LQPLQAESRTEEEEIIP--VTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXX 1044
+ E EE++ + D LEPT+EEL+LL+ QL+ IAVRS RQ E
Sbjct: 172 GDYVSDELEMEEDDFEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSNRQPERKAKRTR 231
Query: 1043 XXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQ 867
+ +Q++DY+DPLRYLRGTT++S+LLTANEEL+LSEGIQ
Sbjct: 232 AAEKAATNVVSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQ 291
Query: 866 VXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 687
ERCG PT AQWAAAA VD+KTLR+RLNYG +CKDKMIKSNIRLVIS
Sbjct: 292 DLLKLEVLHEELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICKDKMIKSNIRLVIS 351
Query: 686 IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 507
IAKNYQGAGMNLQDLVQEGCRGL+RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 352 IAKNYQGAGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 411
Query: 506 IRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQ 327
IRLPFHMVEATYRVKEARKQL++E GRQPD+ E+AEATGLSMKRL AVLL PKAPRSLDQ
Sbjct: 412 IRLPFHMVEATYRVKEARKQLYSENGRQPDNIEVAEATGLSMKRLTAVLLAPKAPRSLDQ 471
Query: 326 KFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGR 147
K GIN++LKPSE+I++P+ +++EDIL+KQFM++DLEKVL +L+PRE+QV+RWRFG+EDGR
Sbjct: 472 KIGINQNLKPSEVIADPEADSAEDILLKQFMKKDLEKVLDSLSPRERQVIRWRFGMEDGR 531
Query: 146 MKTLQEIGELMGVSRERIRQIESCAF 69
MKTLQEIGE MGVSRERIRQIE CAF
Sbjct: 532 MKTLQEIGESMGVSRERIRQIELCAF 557
>ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB [Gossypium raimondii]
gi|763778947|gb|KJB46070.1| hypothetical protein
B456_007G347300 [Gossypium raimondii]
Length = 578
Score = 560 bits (1443), Expect = e-156
Identities = 314/565 (55%), Positives = 382/565 (67%), Gaps = 9/565 (1%)
Frame = -1
Query: 1736 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS----- 1572
M+CLLPQF C PD K ++ +C R+QCVL+TT+++
Sbjct: 1 MSCLLPQF-KCQPDTFSIQFRAHHSHHS-------KHKESICFRSQCVLSTTSSTSMATT 52
Query: 1571 AVVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGPTKE-NIEDTVATETXXXXXXXXXXXX 1395
AV+D+E L+LPS EAH S+ DR +Y G+ GP E + T+ATE
Sbjct: 53 AVLDVEKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAA 112
Query: 1394 XXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSLLGL 1215
A + N + T+++ +T+AER+ +
Sbjct: 113 AAEAVALARAAAKVAKDAAIMVKNHGSAKTEMKSPGSSATDTLTSKWGLFTEAERAGIVG 172
Query: 1214 QPLQAESRTEEEEIIP--VTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXX 1041
+ E EE+ + + D LEPT+EEL+LL+ QL+ IAVRS RQTE
Sbjct: 173 DYVSDELELEEDHLEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSHRQTERKAKRTRA 232
Query: 1040 XXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQV 864
+ +Q++DY+DPLRYLRGTT++S+LLTANEEL+LSEGIQ
Sbjct: 233 AEKAATNVVSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQD 292
Query: 863 XXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISI 684
ERCG PT AQWAAAA VD+KTLR+RLNYG +C DKMIKSNIRLVISI
Sbjct: 293 LLKLEGLHEELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICMDKMIKSNIRLVISI 352
Query: 683 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 504
AKNYQGAGMNLQDLVQEGCRGL+RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 353 AKNYQGAGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 412
Query: 503 RLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQK 324
RLPFHMVEATYRVKEARKQLF+E GRQPD+ E+AEATGLSMKRL AVLL PKAPRSLDQK
Sbjct: 413 RLPFHMVEATYRVKEARKQLFSENGRQPDNIEVAEATGLSMKRLTAVLLAPKAPRSLDQK 472
Query: 323 FGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGRM 144
GIN++LKPSE+I++P+ +++EDIL+KQFM++DLEKVL +L+PRE+QV+RWRFG+EDGR+
Sbjct: 473 IGINQNLKPSEVIADPEADSAEDILLKQFMKKDLEKVLDSLSPRERQVIRWRFGMEDGRV 532
Query: 143 KTLQEIGELMGVSRERIRQIESCAF 69
KTLQEIGE MGVSRERIRQIE CAF
Sbjct: 533 KTLQEIGESMGVSRERIRQIELCAF 557
>ref|XP_008392513.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Malus
domestica]
Length = 638
Score = 560 bits (1443), Expect = e-156
Identities = 311/531 (58%), Positives = 368/531 (69%), Gaps = 10/531 (1%)
Frame = -1
Query: 1631 KTRQPVCIRAQCVLTTTTASA------VVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGP 1470
KTR P+C RAQ +L+TT S V+DME L+LPSLE + SLA R +Y G++ P
Sbjct: 91 KTRDPLCFRAQYILSTTPRSTSTATTTVLDMEKLRLPSLEFNSDSLASSRPWTYTGAIDP 150
Query: 1469 -TKENIEDTVATETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHV 1293
T+ N T+ATET M +
Sbjct: 151 PTEANFGSTLATETLLTSEEAVIAAAAAEAVTLAKAALKVAKDVAMLVSTIHSAKPEISS 210
Query: 1292 EFQPKTESIHLGTVHYTDAERSLLGLQPLQAESRTEEEEIIPVTDCDS--LEPTDEELEL 1119
P+T ++H + + E+ +G + AE+ E+ I + +S +E T+EE EL
Sbjct: 211 PVSPETNALHFNWAQHIETEQVRVGAS-MGAETAFLEDHFIQYAEKESEEVERTNEEFEL 269
Query: 1118 LQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLR 942
LQ QL+ I +S RQTE K + +QE+D++DPLR
Sbjct: 270 LQEQLSKGITAKSSRQTERKARRSKAAEKAAASVVSVKSGSTTRKKRSSVQEIDHSDPLR 329
Query: 941 YLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKT 762
YLR TT +SRLLTANEE++LS GIQ +RCG +PT+AQWAAAAGVDQKT
Sbjct: 330 YLRSTTHTSRLLTANEEIELSAGIQELLKLEKLQEELTQRCGRQPTIAQWAAAAGVDQKT 389
Query: 761 LRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKG 582
LRKR+N GILCKDKMIKSNIRLVISIAKNYQG+GMNLQDLVQ+GCRGLVRGAEKFDASKG
Sbjct: 390 LRKRVNCGILCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQQGCRGLVRGAEKFDASKG 449
Query: 581 FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIA 402
FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEA+KQL++ GR P+D+E+A
Sbjct: 450 FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQLYSLNGRHPNDEEVA 509
Query: 401 EATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDL 222
EATGLSMKRL AVLLTPKAPRSLDQK GIN + KPSE+IS+PD ET+ED+L+K+FM+QDL
Sbjct: 510 EATGLSMKRLSAVLLTPKAPRSLDQKIGINLNFKPSEVISDPDAETAEDLLMKKFMKQDL 569
Query: 221 EKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
EKVL +LNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 570 EKVLDSLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 620
>gb|KDO49416.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
Length = 525
Score = 559 bits (1440), Expect = e-156
Identities = 311/506 (61%), Positives = 363/506 (71%), Gaps = 4/506 (0%)
Frame = -1
Query: 1574 SAVVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGP-TKENIEDTVATETXXXXXXXXXXX 1398
+ V+D+E L+LPSLEAH ++A +R +Y G+VGP T+EN+ ++ATET
Sbjct: 2 TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 61
Query: 1397 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAERSLLG 1218
A M ++ A+ K + + T+ ER+ +
Sbjct: 62 SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISSSADTNTSMWA-QLTERERASII 120
Query: 1217 LQPLQAESRTEEE--EIIPVTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXX 1044
+ E+ EEE E P+ LEPT EEL+LL+ Q++ IAVRS RQTE
Sbjct: 121 GDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTR 180
Query: 1043 XXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQ 867
K P +QEVDY+DPLRYLR TTSSSRLLTANEE+QLS GIQ
Sbjct: 181 AAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQ 240
Query: 866 VXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 687
ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVIS
Sbjct: 241 DLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVIS 300
Query: 686 IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 507
IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 301 IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 360
Query: 506 IRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQ 327
IRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLL+PKAPRSLDQ
Sbjct: 361 IRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLSPKAPRSLDQ 420
Query: 326 KFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGR 147
K GIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRFGLEDGR
Sbjct: 421 KIGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGR 480
Query: 146 MKTLQEIGELMGVSRERIRQIESCAF 69
MKTLQEIGELMGVSRERIRQIES AF
Sbjct: 481 MKTLQEIGELMGVSRERIRQIESSAF 506
>ref|XP_010097670.1| RNA polymerase sigma factor rpoD [Morus notabilis]
gi|587881690|gb|EXB70625.1| RNA polymerase sigma factor
rpoD [Morus notabilis]
Length = 574
Score = 558 bits (1439), Expect = e-156
Identities = 328/571 (57%), Positives = 384/571 (67%), Gaps = 15/571 (2%)
Frame = -1
Query: 1736 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTASA---- 1569
M+CLLPQF NC PD S+L K R + AQCVL+TT+ S
Sbjct: 1 MSCLLPQF-NCKPDTFSAQFNFRTHSLPTPNSHLPKARD-INSLAQCVLSTTSPSTSVGA 58
Query: 1568 --VVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGPTKE-NIEDTVATETXXXXXXXXXXX 1398
V+ +E L+ PSL+A+ S+ +R +Y G+ GP E N E T+ATET
Sbjct: 59 TYVLSVEKLRFPSLDANSESVTSNRPWTYTGATGPPVEANFEATLATETLLTSEEAVIAA 118
Query: 1397 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTD---AERS 1227
DA L V + ESI L + + A+ +
Sbjct: 119 AAAEAVTLAKAAVKVA---------KDAAL---LVRPSTRAESISLVSSEARNIKTAQAA 166
Query: 1226 LLGLQPLQAESRTEEEEIIPVTDC----DSLEPTDEELELLQVQLTNRIAVRSGRQTEXX 1059
L+AE E+ P D + L+PT+EEL +LQ QL+ IAVRS RQ+E
Sbjct: 167 SRVRDSLRAEMALIEDH--PPKDAAKESNDLQPTNEELRILQEQLSKSIAVRSRRQSERK 224
Query: 1058 XXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQL 882
K A +Q+VD++DPLRYLR TTS+SRLLTA EE++L
Sbjct: 225 AKRDRAAEKAAANVVAVKSGSNSRKKRASVQDVDHSDPLRYLRSTTSTSRLLTATEEIEL 284
Query: 881 SEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNI 702
SEGIQ ERCGG PT AQWAAAAGVDQKTLR+R+NYGILCKDKMIKSN+
Sbjct: 285 SEGIQDLLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNV 344
Query: 701 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS 522
RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS
Sbjct: 345 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS 404
Query: 521 DQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAP 342
DQSRTIRLPFHMVEATYRVKEARKQL++E GRQP+D+E+AEATGLSMKRL AVLLTPKAP
Sbjct: 405 DQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLSMKRLAAVLLTPKAP 464
Query: 341 RSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFG 162
RSL+QK GIN++LKPSEII++PD ET ED+L +QFM+QDL+KVL +LN REKQV+RWRFG
Sbjct: 465 RSLEQKIGINQNLKPSEIIADPDAETLEDVLTRQFMKQDLDKVLDSLNQREKQVIRWRFG 524
Query: 161 LEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
++DGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 525 MDDGRMKTLQEIGELMGVSRERIRQIESCAF 555
>ref|XP_009377636.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Pyrus x
bretschneideri]
Length = 613
Score = 556 bits (1432), Expect = e-155
Identities = 310/531 (58%), Positives = 367/531 (69%), Gaps = 10/531 (1%)
Frame = -1
Query: 1631 KTRQPVCIRAQCVLTTTTASA------VVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGP 1470
KTR P+C RAQ +L+TT+ S V+D+E L+LPSLE + SLA R +Y G++GP
Sbjct: 93 KTRDPLCFRAQYILSTTSHSTSTATTTVLDLERLRLPSLEVNSDSLASSRPWTYTGAIGP 152
Query: 1469 -TKENIEDTVATETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHV 1293
T+ N T+ATET L +
Sbjct: 153 LTEANFGATLATETLLTSEEAVIEAAAAEA----------------------VTLAKAAL 190
Query: 1292 EFQPKTESIHLGTVHYTDAERSLLGLQPLQAESRTEEEEIIP--VTDCDSLEPTDEELEL 1119
+ +H+ T + S+ AE+ E+ I + + + +E T EE EL
Sbjct: 191 KVAKDVAMLHMETEQVSRVGASM------GAETAFVEDHFIQSAIKELEEVEQTYEEFEL 244
Query: 1118 LQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLR 942
LQ QL+ I +S RQTE K + +QE+D++DPLR
Sbjct: 245 LQEQLSKGITAKSSRQTERKARRAKAAEKAAASVVSVKSGSATRKKRSSVQEIDHSDPLR 304
Query: 941 YLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKT 762
YLR TT +SRLLTANEE++ SEGIQ +RCGG+PT+AQWAAAAGVDQKT
Sbjct: 305 YLRSTTHTSRLLTANEEIEFSEGIQELLKLEKLHEELAQRCGGQPTIAQWAAAAGVDQKT 364
Query: 761 LRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKG 582
LRKR+NYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKG
Sbjct: 365 LRKRVNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKG 424
Query: 581 FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIA 402
FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA+KQL++ GR P+D+E+A
Sbjct: 425 FKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSLNGRHPNDEEVA 484
Query: 401 EATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDL 222
EATGLSMKRL AVLLTPKAPRSL+QK GIN++LKPSE+IS+PD ET+ED+L+K+FM+QDL
Sbjct: 485 EATGLSMKRLSAVLLTPKAPRSLEQKIGINQNLKPSEVISDPDAETAEDLLMKKFMKQDL 544
Query: 221 EKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
EKVL +LN REKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 545 EKVLDSLNTREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 595
>ref|XP_004154029.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Cucumis
sativus] gi|700191056|gb|KGN46260.1| RNA polymerase sigma
factor rpoD1 [Cucumis sativus]
Length = 580
Score = 554 bits (1427), Expect = e-154
Identities = 313/571 (54%), Positives = 378/571 (66%), Gaps = 15/571 (2%)
Frame = -1
Query: 1736 MACLLPQFFNCAPDXXXXXXXXXXXXXXXXXSY------LFKTRQPVCIRAQCVL----- 1590
M+CLLPQF C P+ K R P +R QC+L
Sbjct: 1 MSCLLPQF-KCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASP 59
Query: 1589 -TTTTASAVVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGPTKENIEDTVATETXXXXXX 1413
T+T + +D++ L+LP + + S++++R SY+G+V E ++A+
Sbjct: 60 PTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAV-------ESSLASTLLTSEEA 112
Query: 1412 XXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFQPKTESIHLGTVHYTDAE 1233
A + + + +R K + PK +++H + ++E
Sbjct: 113 SIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKS-QSSPKPDALHFKWAQFMESE 171
Query: 1232 RSLLGLQPLQAESRTEEEEIIP--VTDCDSLEPTDEELELLQVQLTNRIAVRSGRQTEXX 1059
R+ + +P+ R E + + T+ D +EPT EELELLQ +L+ I V+S RQTE
Sbjct: 172 RADIIGEPVGVNKRPMEGDALEPSTTESDDMEPTSEELELLQDELSESITVKSKRQTERK 231
Query: 1058 XXXXXXXXXXXXXXXXXXXXXXXXXKA-PIQEVDYADPLRYLRGTTSSSRLLTANEELQL 882
K +QEVDY+DPLRYLR TT++SRLLTA EEL+L
Sbjct: 232 ARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELEL 291
Query: 881 SEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNI 702
SEGIQ ER G +PT AQWAAAAGV+Q+TLRKRLNYG LCKDKMIKSNI
Sbjct: 292 SEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNI 351
Query: 701 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLS 522
RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRK LS
Sbjct: 352 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLS 411
Query: 521 DQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAP 342
DQSRTIRLPFHMVEATYRVKEARKQL +E GR PDDKEIAEA GLSMKRL AVL+TPKAP
Sbjct: 412 DQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAP 471
Query: 341 RSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFG 162
RSL+QK GIN++LKPSE+IS+P+ ET ED+LIKQFM+QDLEKVL +LNPREKQV+RWRFG
Sbjct: 472 RSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFG 531
Query: 161 LEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
+EDGRMKTLQEIGE+MGVSRERIRQIESCAF
Sbjct: 532 MEDGRMKTLQEIGEIMGVSRERIRQIESCAF 562
>ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
sylvestris]
Length = 629
Score = 553 bits (1424), Expect = e-154
Identities = 315/516 (61%), Positives = 360/516 (69%), Gaps = 10/516 (1%)
Frame = -1
Query: 1586 TTTASAVVDMENLQLPSLEAHLRSLAMDRSMSYVGSVGP-TKENIEDTVATETXXXXXXX 1410
+T SAV+D+ L+L S EA+ S+A DR +Y G+VGP T+ N + +ATE
Sbjct: 98 STATSAVLDIPRLKLLSFEANPDSVAPDRPWTYTGAVGPPTEANTKSALATENLVTSDEA 157
Query: 1409 XXXXXXXXXXXXXXXXXXXXXXAFM--GGDN----SDARLDHKHVEFQPKTESIHLGTVH 1248
A + G +N DA ES+ L
Sbjct: 158 VVAAAAAEAVALAKAALKFAKDAVLLVGHNNLKNSDDAGRGTLSEARTTPFESVPLAQPS 217
Query: 1247 YTDAERSLLGLQPLQAESRTEEEEIIP--VTDCDSLEPTDEELELLQVQLTNRIAVRSGR 1074
T R +G + +E + E + +TD D LEP+ EELE+LQ QL+N IAV+S R
Sbjct: 218 ETGRVR--VGAEFKGSEMKWSESSLFEDSLTDSDDLEPSPEELEILQSQLSNVIAVKSTR 275
Query: 1073 QTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTAN 897
QTE K +QEVDY+DPLRYLRGTT SSRLLTA+
Sbjct: 276 QTERKARRGRAAERAAANVVSVKSGSTSRKKRTSVQEVDYSDPLRYLRGTTGSSRLLTAS 335
Query: 896 EELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKM 717
EE +LS GIQ RCGG+PT+AQWAAAAGV+QKTLRKRLNYGILCKDKM
Sbjct: 336 EEQELSRGIQDLLKLERLEQELAARCGGQPTIAQWAAAAGVEQKTLRKRLNYGILCKDKM 395
Query: 716 IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 537
IKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAV
Sbjct: 396 IKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDAAKGFKFSTYAHWWIKQAV 455
Query: 536 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLL 357
RKSLSDQSRTIRLPFHMVEATYRVKEARKQLF E GR P+D+E+AEATGLSMKRL AV+L
Sbjct: 456 RKSLSDQSRTIRLPFHMVEATYRVKEARKQLFTENGRLPNDEEVAEATGLSMKRLTAVML 515
Query: 356 TPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVV 177
TPKAPRSLDQK G N+SLKPSE+I++P+ ETSE++L+KQFMRQDLEKVL TLNPREKQVV
Sbjct: 516 TPKAPRSLDQKIGFNQSLKPSEVIADPEAETSEEMLMKQFMRQDLEKVLDTLNPREKQVV 575
Query: 176 RWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
+WRFGL DGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 576 KWRFGLADGRMKTLQEIGELMGVSRERIRQIESCAF 611