BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00006197
         (1886 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-...   621   e-175
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-...   612   e-172
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   605   e-170
ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB ...   605   e-170
gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sin...   602   e-169
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...   602   e-169
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ...   600   e-168
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ...   600   e-168
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac...   595   e-167
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ...   595   e-167
gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arbor...   582   e-163
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-...   580   e-162
ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB ...   579   e-162
ref|XP_008240611.1| PREDICTED: RNA polymerase sigma factor sigB ...   577   e-161
gb|KDO49416.1| hypothetical protein CISIN_1g007404mg [Citrus sin...   576   e-161
ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-...   572   e-160
ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-...   572   e-160
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB ...   570   e-159
gb|AKC88661.1| sigma factor [Melianthus villosus]                     567   e-158
ref|XP_009617776.1| PREDICTED: RNA polymerase sigma factor sigB-...   566   e-158

>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
          Length = 572

 Score =  621 bits (1602), Expect = e-175
 Identities = 343/562 (61%), Positives = 399/562 (70%), Gaps = 5/562 (0%)
 Frame = -1

Query: 1739 MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS---AV 1569
            MACLLPQF  C PD                 +   K R  +C R QC+L+TTTA+    V
Sbjct: 1    MACLLPQF-KCSPDTLSIHFKTHQHQHHYSNNSQLKARDLLCFRTQCILSTTTATMTTTV 59

Query: 1568 VDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXXXXXX 1392
            VD EKL++PSLEAHL S+  DR ++Y+G++ PPTK   E T+ATE L TG+E        
Sbjct: 60   VDDEKLRMPSLEAHLISVPADRPLTYIGAIDPPTKAKFEATLATEPLITGDEALIAAAAV 119

Query: 1391 XXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERSLLGLQ 1212
                            A M   N  ++ D    +   + ++    T    + E+  +   
Sbjct: 120  EAVALAKAAVEIAKDAALMVSTNPSSKSDKWPPDIPSELDTYWHETAQLNEIEQVDMVHH 179

Query: 1211 PLQAECRTEEEEIIPVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXXXX 1032
             L AE R +E       DSD L+PTDEEL+LLQ+QL+  IAVRSGRQTE           
Sbjct: 180  SLGAESRPKE-------DSDYLDPTDEELKLLQMQLSKSIAVRSGRQTERRARRARAAEK 232

Query: 1031 XXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVXXX 855
                            K + +Q+VDY+DPLRYLRGTTS+SRLLTA EEL+ SEGIQ    
Sbjct: 233  VAANVVAVKSGSSSRKKRSALQDVDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQDLLK 292

Query: 854  XXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKN 675
                     ER GG+PT AQWAAAAG+DQKTLRKRLNYGILCKDKMIKSNIRLVISIAKN
Sbjct: 293  LEKLYEELAERYGGQPTFAQWAAAAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKN 352

Query: 674  YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 495
            YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP
Sbjct: 353  YQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLP 412

Query: 494  FHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQKFGI 315
            FHMVEATYRV+EARKQL++E GR PD++E+AEATGLSMKRL AVLLTPKAPRSLDQK GI
Sbjct: 413  FHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGI 472

Query: 314  NESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGRMKTL 135
            N++LKPSE+I++PD ET+E++L+K+FM+QDLEKVL +LNPREKQV+RWRFGLEDGRMKTL
Sbjct: 473  NQNLKPSEVIADPDAETTEELLMKKFMKQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTL 532

Query: 134  QEIGELMGVSRERIRQIESCAF 69
            QEIGELMGVSRERIRQIESCAF
Sbjct: 533  QEIGELMGVSRERIRQIESCAF 554


>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
            nucifera]
          Length = 584

 Score =  612 bits (1577), Expect = e-172
 Identities = 338/567 (59%), Positives = 400/567 (70%), Gaps = 10/567 (1%)
 Frame = -1

Query: 1739 MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYL---FKTRQPVCIRAQCVLTTTTAS-- 1575
            MACLLPQF  C PD                        K+R  +  + QCVL+TTT +  
Sbjct: 1    MACLLPQF-KCSPDTISIHFRTHQLQHHKHHHCNNNHSKSRDLLSFQTQCVLSTTTTAMT 59

Query: 1574 -AVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXXX 1401
              +VD+EKL++PSLE+H  S+A DR +SY+G+ GPPTK + E T+A E+L TG+E     
Sbjct: 60   TTLVDVEKLRMPSLESHSISVASDRPLSYIGATGPPTKASFEATLAMESLITGDEALIAA 119

Query: 1400 XXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERSLL 1221
                               A M  D S +  ++   +FS ++    L     T+ +    
Sbjct: 120  AAAEAVALAKEAVEVAKDAALMVNDKSSSESENGPSDFSSESHIFRLEKAQLTETQEVGR 179

Query: 1220 GLQPLQAECRTEEEEIIPVT--DSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 1047
                +  E R EEE+ +  +  DSD L+ +DEE +LLQ+QL   IAVRSGRQTE      
Sbjct: 180  IDHSVGLESRQEEEQSVQFSNKDSDGLDSSDEEFKLLQMQLLKSIAVRSGRQTERQARRA 239

Query: 1046 XXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 870
                                 + A +Q++DY+DPLRYLRGTTS+SRLLTA EEL+LSEGI
Sbjct: 240  RAMEKASTNVLSVKSGHSSRKRRAALQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGI 299

Query: 869  QVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 690
            Q             ERCGG+PT AQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI
Sbjct: 300  QDLLKLEKLHEELAERCGGQPTFAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 359

Query: 689  SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 510
            SIAKNYQGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR
Sbjct: 360  SIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 419

Query: 509  TIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLD 330
            TIRLPFHMVEATYRV+EA+KQL++E GR PD++E+AEATGLSMKRL AVLLTPKAP SLD
Sbjct: 420  TIRLPFHMVEATYRVREAKKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLD 479

Query: 329  QKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDG 150
            QK G+N+ +KPSEII++PD ET+E++LIKQFM+QDLEKVL +LNPREKQV+RWRFG+EDG
Sbjct: 480  QKIGMNQDMKPSEIIADPDAETAEELLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDG 539

Query: 149  RMKTLQEIGELMGVSRERIRQIESCAF 69
            RMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 540  RMKTLQEIGELMGVSRERIRQIESCAF 566


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  605 bits (1560), Expect = e-170
 Identities = 340/567 (59%), Positives = 399/567 (70%), Gaps = 10/567 (1%)
 Frame = -1

Query: 1739 MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTASA---- 1572
            M+CLLPQF  C PD                  +  K+++P+C R  CVL+TT+ S     
Sbjct: 24   MSCLLPQF-KCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSPSTSTAM 81

Query: 1571 --VVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETLTGEEXXXXXX 1398
              V+D+EKL+LPSLEAH  ++A +R  +Y G+VGP T+EN+  ++ATETLT +E      
Sbjct: 82   TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 141

Query: 1397 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKH-VEFSPKTESIHLGTVHYTDAERSLL 1221
                              A M   ++ A+   K  +  S  T +     +  T+ ER+ +
Sbjct: 142  SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQL--TERERASI 199

Query: 1220 GLQPLQAECRTEEE--EIIPVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 1047
                +  E   EEE  E  P+  S  LEPT EEL+LL+ Q++  IAVRS RQTE      
Sbjct: 200  IGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRT 259

Query: 1046 XXXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 870
                                 K P +QEVDY+DPLRYLR TTSSSRLLTANEE+QLS GI
Sbjct: 260  RAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGI 319

Query: 869  QVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 690
            Q             ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVI
Sbjct: 320  QDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVI 379

Query: 689  SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 510
            SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR
Sbjct: 380  SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 439

Query: 509  TIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLD 330
            TIRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLLTPKAPRSLD
Sbjct: 440  TIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLD 499

Query: 329  QKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDG 150
            QKFGIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRFGLEDG
Sbjct: 500  QKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDG 559

Query: 149  RMKTLQEIGELMGVSRERIRQIESCAF 69
            RMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 560  RMKTLQEIGELMGVSRERIRQIESSAF 586


>ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB [Jatropha curcas]
            gi|802585247|ref|XP_012070323.1| PREDICTED: RNA
            polymerase sigma factor sigB [Jatropha curcas]
            gi|643732514|gb|KDP39610.1| hypothetical protein
            JCGZ_02630 [Jatropha curcas]
          Length = 577

 Score =  605 bits (1559), Expect = e-170
 Identities = 343/564 (60%), Positives = 396/564 (70%), Gaps = 7/564 (1%)
 Frame = -1

Query: 1739 MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTT---TASAV 1569
            M+CLLPQF  C PD                     K+R+PVC RAQC+L+TT   T++AV
Sbjct: 1    MSCLLPQF-KCQPDTFSIHFRTHYLQNSNFCQSA-KSREPVCFRAQCILSTTSPSTSTAV 58

Query: 1568 VDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXXXXXX 1392
            +D+EKL+LPS EAH  SL  +   +YVGS+GPP KE    T+ATETL TG++        
Sbjct: 59   LDLEKLRLPSFEAHPDSLVANSPWTYVGSIGPP-KETFGSTLATETLITGDDAVIAAAAA 117

Query: 1391 XXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERSLLGLQ 1212
                            A +      +  + K +E  P    +      +T+ +R+ +   
Sbjct: 118  EAVALARAAAKVAKDAAILVKSFPSSEAESK-LEI-PSIADVSSRWPQFTETDRARIIGD 175

Query: 1211 PLQAECRTEEEEII--PVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXX 1038
             + AE  + EE  +  P  +SD LEPT EELELLQ QL+  IAVRS RQTE         
Sbjct: 176  SVTAETGSREEHPMQHPTKESDHLEPTHEELELLQKQLSEGIAVRSRRQTERKERRTRAA 235

Query: 1037 XXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVX 861
                              K  P+QEVDY+DPLRYLRGTTS+S+LLTA EEL+LSEGIQ  
Sbjct: 236  EKAAANVMSWKSGSTSKKKRGPLQEVDYSDPLRYLRGTTSTSKLLTATEELELSEGIQDL 295

Query: 860  XXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIA 681
                       ERCGG+PT  QWAAAAGVDQKTLR RLNYGI CKD+MIKSNIRLVISIA
Sbjct: 296  LKLERLHEELAERCGGQPTFQQWAAAAGVDQKTLRTRLNYGISCKDRMIKSNIRLVISIA 355

Query: 680  KNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 501
            KNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR
Sbjct: 356  KNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIR 415

Query: 500  LPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQKF 321
            LPFHMVEATYRVKEARKQL++E GR PDD+E+AEATGLSMKRL AVLLTPKAPRSLDQK 
Sbjct: 416  LPFHMVEATYRVKEARKQLYSENGRYPDDEEVAEATGLSMKRLSAVLLTPKAPRSLDQKI 475

Query: 320  GINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGRMK 141
            GIN  LKPSEII++PD ET+ED+L+KQFM+QDLEKVL +L+PRE QV+RWRFGLEDGR+K
Sbjct: 476  GINMDLKPSEIIADPDAETAEDLLMKQFMKQDLEKVLDSLSPRENQVIRWRFGLEDGRIK 535

Query: 140  TLQEIGELMGVSRERIRQIESCAF 69
            TLQEIGE+MGVSRERIRQIES AF
Sbjct: 536  TLQEIGEIMGVSRERIRQIESSAF 559


>gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
          Length = 605

 Score =  602 bits (1551), Expect = e-169
 Identities = 337/566 (59%), Positives = 396/566 (69%), Gaps = 9/566 (1%)
 Frame = -1

Query: 1739 MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTASA---- 1572
            M+CLLPQF  C PD                  +  K+++P+C R  CVL+TT+ S     
Sbjct: 24   MSCLLPQF-KCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSPSTSTAM 81

Query: 1571 --VVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETLTGEEXXXXXX 1398
              V+D+EKL+LPSLEAH  ++A +R  +Y G+VGP T+EN+  ++ATETLT +E      
Sbjct: 82   TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 141

Query: 1397 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERSLLG 1218
                              A M   ++ A+   K    S    +  +     T+ ER+ + 
Sbjct: 142  SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISSSADTNTSMWA-QLTERERASII 200

Query: 1217 LQPLQAECRTEEE--EIIPVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXX 1044
               +  E   EEE  E  P+  S  LEPT EEL+LL+ Q++  IAVRS RQTE       
Sbjct: 201  GDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTR 260

Query: 1043 XXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQ 867
                                K P +QEVDY+DPLRYLR TTSSSRLLTANEE+QLS GIQ
Sbjct: 261  AAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQ 320

Query: 866  VXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 687
                         ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVIS
Sbjct: 321  DLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVIS 380

Query: 686  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 507
            IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 381  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 440

Query: 506  IRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQ 327
            IRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLL+PKAPRSLDQ
Sbjct: 441  IRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLSPKAPRSLDQ 500

Query: 326  KFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGR 147
            K GIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRFGLEDGR
Sbjct: 501  KIGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGR 560

Query: 146  MKTLQEIGELMGVSRERIRQIESCAF 69
            MKTLQEIGELMGVSRERIRQIES AF
Sbjct: 561  MKTLQEIGELMGVSRERIRQIESSAF 586


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
            gi|557539534|gb|ESR50578.1| hypothetical protein
            CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score =  602 bits (1551), Expect = e-169
 Identities = 337/566 (59%), Positives = 396/566 (69%), Gaps = 9/566 (1%)
 Frame = -1

Query: 1739 MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTASA---- 1572
            M+CLLPQF  C PD                  +  K+++P+C R  CVL+TT+ S     
Sbjct: 24   MSCLLPQF-KCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSPSTSTAM 81

Query: 1571 --VVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETLTGEEXXXXXX 1398
              V+D+EKL+LPSLEAH  ++A +R  +Y G+VGP T+EN+  ++ATETLT +E      
Sbjct: 82   TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 141

Query: 1397 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERSLLG 1218
                              A M   ++ A+   K    S   ++        T+ ER+ + 
Sbjct: 142  SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA-ISLSADTSTSMWAQLTERERASII 200

Query: 1217 LQPLQAECRTEEE--EIIPVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXX 1044
               +  E   EEE  E  P+  S  LEPT EEL+LL+ Q++  IAVRS RQTE       
Sbjct: 201  GDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTR 260

Query: 1043 XXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQ 867
                                K P +QEVDY+DPLRYLR TTSSSRLLTANEE+QLS GIQ
Sbjct: 261  AAEKAAANVMSVKSGSTTRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQ 320

Query: 866  VXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 687
                         ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVIS
Sbjct: 321  DLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVIS 380

Query: 686  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 507
            IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 381  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 440

Query: 506  IRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQ 327
            IRLPFHMVEATYRVKEARKQL++E GR P+++E+A+ATGLSMKRL AVLL PKAPRSLDQ
Sbjct: 441  IRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAKATGLSMKRLHAVLLAPKAPRSLDQ 500

Query: 326  KFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGR 147
            KFGIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRFGLEDGR
Sbjct: 501  KFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGR 560

Query: 146  MKTLQEIGELMGVSRERIRQIESCAF 69
            MKTLQEIGELMGVSRERIRQIES AF
Sbjct: 561  MKTLQEIGELMGVSRERIRQIESSAF 586


>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
            grandis] gi|629111779|gb|KCW76739.1| hypothetical protein
            EUGRSUZ_D01094 [Eucalyptus grandis]
          Length = 588

 Score =  600 bits (1548), Expect = e-168
 Identities = 343/568 (60%), Positives = 393/568 (69%), Gaps = 12/568 (2%)
 Frame = -1

Query: 1736 ACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTASA----- 1572
            +CLLPQF  C PD                  +  K R+    RAQC+L+ T+ S      
Sbjct: 15   SCLLPQF-KCQPDTFSIQFRT----------HAQKNRETTYFRAQCLLSATSPSTLSSAA 63

Query: 1571 ---VVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXX 1404
               V+DMEKL+LPSLE    S   +R  +Y G+VGPP + N+  T+ATETL T +E    
Sbjct: 64   TAVVLDMEKLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIA 123

Query: 1403 XXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERSL 1224
                                A M  + S + +D+K +E S +T +         + E S 
Sbjct: 124  AAASEAVTLAKAALKSAKHAALMIRNESSSNIDNK-LELSSRTSTSLSKHAELLELEHSN 182

Query: 1223 LGLQPLQAECRTEEEEIIPVTD--SDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXX 1050
            +  + ++ E    E  ++  +   S+ LEPT EEL+LLQVQL   IAVRS RQTE     
Sbjct: 183  ILTELMEPEGGLREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIR 242

Query: 1049 XXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEG 873
                                  K A +QEVDY+DPLRYLRGTTSSSRLLTA EE +LSEG
Sbjct: 243  ERAAEKAAANVVSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEG 302

Query: 872  IQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLV 693
            IQ             ERCGG+P  AQWAAAAGVDQKTLRKRLNYG LCKDKMIKSNIRLV
Sbjct: 303  IQDLLKLERLQVELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLV 362

Query: 692  ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 513
            ISIAKNYQGAGMNLQDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 363  ISIAKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 422

Query: 512  RTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSL 333
            RTIRLPFHMVEATYRVKEARKQL++E GRQPD++E+AEATGLSMKRL AVL+TPKAPRSL
Sbjct: 423  RTIRLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSL 482

Query: 332  DQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLED 153
            DQK GIN++LKPSE+I++P+ ETSED+L+KQFMRQDLEKVL TLNPREKQVVRWRFGLED
Sbjct: 483  DQKIGINQNLKPSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLED 542

Query: 152  GRMKTLQEIGELMGVSRERIRQIESCAF 69
            GRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 543  GRMKTLQEIGELMGVSRERIRQIESCAF 570


>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
            gi|296090195|emb|CBI40014.3| unnamed protein product
            [Vitis vinifera]
          Length = 575

 Score =  600 bits (1548), Expect = e-168
 Identities = 338/567 (59%), Positives = 392/567 (69%), Gaps = 10/567 (1%)
 Frame = -1

Query: 1739 MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTT------A 1578
            M+CLLPQF  CPPD                   L K R+ +  R QC L+TT+       
Sbjct: 1    MSCLLPQF-KCPPDTFSTHPKLHI---------LSKNREAIYFRVQCALSTTSPPLSTST 50

Query: 1577 SAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXXX 1401
            +AV+D+EKL+LPSLE+H  S+A  R  +Y+G VGPPT+ N E T+A ETL T EE     
Sbjct: 51   TAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAA 110

Query: 1400 XXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAER-SL 1224
                               A + G N+ A+ + K   F    ++     + +T+ ER  +
Sbjct: 111  AAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGI 170

Query: 1223 LGLQPLQAECRTEEEEIIPVT-DSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 1047
            LG          +   +  VT DSD LEPT EELELL+ + +  I VRS RQ E      
Sbjct: 171  LGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRA 230

Query: 1046 XXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 870
                                 K   +QEVDY+DPLRYLRGTTS+SRLLTA EEL+LSEGI
Sbjct: 231  RAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGI 290

Query: 869  QVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 690
            Q             ER G KPT AQWAAAAGVDQKTLR+R NYGI CKDKMIKSNIRLVI
Sbjct: 291  QDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVI 350

Query: 689  SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 510
            SIAKNYQGAGMN+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR
Sbjct: 351  SIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 410

Query: 509  TIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLD 330
            TIRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLLTPKAPRSLD
Sbjct: 411  TIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLD 470

Query: 329  QKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDG 150
            QK GIN++LKPSE+I++PD ET+E++LIKQFMR+DLEKVL +LNPREKQV+RWR+GLEDG
Sbjct: 471  QKIGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDG 530

Query: 149  RMKTLQEIGELMGVSRERIRQIESCAF 69
            R KTLQEIGELMGVSRERIRQIESCAF
Sbjct: 531  RTKTLQEIGELMGVSRERIRQIESCAF 557


>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
            gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit 2
            [Theobroma cacao]
          Length = 623

 Score =  595 bits (1535), Expect = e-167
 Identities = 331/543 (60%), Positives = 397/543 (73%), Gaps = 19/543 (3%)
 Frame = -1

Query: 1640 LFKTRQPVCIRAQCVLTTT------TASAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSV 1479
            L K ++ +C R QCVL+TT      TA+AV+D+EKL+LPS EAH  S+A+DR  +Y+G+ 
Sbjct: 62   LAKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWTYIGAT 121

Query: 1478 GPPTKENIEDTVATETL-TGEEXXXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDH 1302
            GPP++ ++  T+AT+ L T +E                        A M  + + A+ + 
Sbjct: 122  GPPSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENYNYAKTEM 181

Query: 1301 KH-VEFSPKTESIHLGTVHYTDAERS-LLGLQPL-QAECRTEEEEIIPVTDSDSLEPTDE 1131
            K  V F+  T+S       +T+AER+ ++G  P  ++E   ++ E    T+SD LEPT+E
Sbjct: 182  KSGVSFA--TDSFTSKWALFTEAERAGIIGDSPTDESEMEEDDSEQNSTTESDELEPTNE 239

Query: 1130 ELELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYA 954
            ELE L+ QL+  IAVRS RQTE                           +   +Q+VDY+
Sbjct: 240  ELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVDYS 299

Query: 953  DPLRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGV 774
            DPLRYLRGTTS+SRLLTANEEL+LSEGIQ             ERCGG+PT AQWAAAAGV
Sbjct: 300  DPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGV 359

Query: 773  DQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 594
            DQKTLR RLNYG+ CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD
Sbjct: 360  DQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 419

Query: 593  ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDD 414
            ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++E GR PD+
Sbjct: 420  ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDN 479

Query: 413  KEIAEATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPS--------EIISNPDDETSE 258
            +E+AEATGLSMKRL AVLLTPKAPRSLDQK GIN++LKPS        E+I++P+ ET+E
Sbjct: 480  EEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIADPEAETAE 539

Query: 257  DILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIES 78
            D+LIKQFMR+DLEKVL +L+ RE+QV+RWRFG+EDGRMKTLQEIGELMGVSRERIRQIES
Sbjct: 540  DMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIES 599

Query: 77   CAF 69
            CAF
Sbjct: 600  CAF 602


>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
            grandis]
          Length = 601

 Score =  595 bits (1534), Expect = e-167
 Identities = 334/534 (62%), Positives = 382/534 (71%), Gaps = 12/534 (2%)
 Frame = -1

Query: 1634 KTRQPVCIRAQCVLTTTTASA--------VVDMEKLQLPSLEAHLRSLAMDRSMSYVGSV 1479
            K R+    RAQC+L+ T+ S         V+DMEKL+LPSLE    S   +R  +Y G+V
Sbjct: 51   KNRETTYFRAQCLLSATSPSTLSSAATAVVLDMEKLRLPSLEVLTDSPTSNRPWTYTGAV 110

Query: 1478 GPPTKENIEDTVATETL-TGEEXXXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDH 1302
            GPP + N+  T+ATETL T +E                        A M  + S + +D+
Sbjct: 111  GPPAEVNLGATLATETLLTSDEAVIAAAASEAVTLAKAALKSAKHAALMIRNESSSNIDN 170

Query: 1301 KHVEFSPKTESIHLGTVHYTDAERSLLGLQPLQAECRTEEEEIIPVTD--SDSLEPTDEE 1128
            K +E S +T +         + E S +  + ++ E    E  ++  +   S+ LEPT EE
Sbjct: 171  K-LELSSRTSTSLSKHAELLELEHSNILTELMEPEGGLREGNVMQYSTDKSEDLEPTHEE 229

Query: 1127 LELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYAD 951
            L+LLQVQL   IAVRS RQTE                           K A +QEVDY+D
Sbjct: 230  LQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAAANVVSVKSGSLSKKKRAALQEVDYSD 289

Query: 950  PLRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVD 771
            PLRYLRGTTSSSRLLTA EE +LSEGIQ             ERCGG+P  AQWAAAAGVD
Sbjct: 290  PLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERCGGEPAFAQWAAAAGVD 349

Query: 770  QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA 591
            QKTLRKRLNYG LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG EKFDA
Sbjct: 350  QKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGCEKFDA 409

Query: 590  SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDK 411
            SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++E GRQPD++
Sbjct: 410  SKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDNE 469

Query: 410  EIAEATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMR 231
            E+AEATGLSMKRL AVL+TPKAPRSLDQK GIN++LKPSE+I++P+ ETSED+L+KQFMR
Sbjct: 470  EVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIADPNAETSEDVLLKQFMR 529

Query: 230  QDLEKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
            QDLEKVL TLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 530  QDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 583


>gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 578

 Score =  582 bits (1500), Expect = e-163
 Identities = 323/566 (57%), Positives = 396/566 (69%), Gaps = 9/566 (1%)
 Frame = -1

Query: 1739 MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS----- 1575
            M+CLLPQF  C PD                     K ++ +C R+QCVL+TT+++     
Sbjct: 1    MSCLLPQF-KCQPDTFSIQFRAHHSHHS-------KHKESICFRSQCVLSTTSSTSTATT 52

Query: 1574 AVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXXXX 1398
            AV+D+EKL+LPS EAH  S+  DR  +Y G+ GPP++ +   T+ATE L T +E      
Sbjct: 53   AVLDVEKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAA 112

Query: 1397 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERSLLG 1218
                              A M  ++S A+ + K    S  T+++      +T+AER+ + 
Sbjct: 113  AAEAVALARAAAKVAKDAAIMVKNHSSAKTEMKSPG-SSATDTLTSKWGLFTEAERAGIV 171

Query: 1217 LQPLQAECRTEEEEIIP--VTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXX 1044
               +  E   EE++       +SD LEPT+EEL+LL+ QL+  IAVRS RQ E       
Sbjct: 172  GDYVSDELEMEEDDFEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSNRQPERKAKRTR 231

Query: 1043 XXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQ 867
                                +   +Q++DY+DPLRYLRGTT++S+LLTANEEL+LSEGIQ
Sbjct: 232  AAEKAATNVVSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQ 291

Query: 866  VXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 687
                         ERCG  PT AQWAAAA VD+KTLR+RLNYG +CKDKMIKSNIRLVIS
Sbjct: 292  DLLKLEVLHEELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICKDKMIKSNIRLVIS 351

Query: 686  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 507
            IAKNYQGAGMNLQDLVQEGCRGL+RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 352  IAKNYQGAGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 411

Query: 506  IRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQ 327
            IRLPFHMVEATYRVKEARKQL++E GRQPD+ E+AEATGLSMKRL AVLL PKAPRSLDQ
Sbjct: 412  IRLPFHMVEATYRVKEARKQLYSENGRQPDNIEVAEATGLSMKRLTAVLLAPKAPRSLDQ 471

Query: 326  KFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGR 147
            K GIN++LKPSE+I++P+ +++EDIL+KQFM++DLEKVL +L+PRE+QV+RWRFG+EDGR
Sbjct: 472  KIGINQNLKPSEVIADPEADSAEDILLKQFMKKDLEKVLDSLSPRERQVIRWRFGMEDGR 531

Query: 146  MKTLQEIGELMGVSRERIRQIESCAF 69
            MKTLQEIGE MGVSRERIRQIE CAF
Sbjct: 532  MKTLQEIGESMGVSRERIRQIELCAF 557


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  580 bits (1494), Expect = e-162
 Identities = 320/507 (63%), Positives = 372/507 (73%), Gaps = 4/507 (0%)
 Frame = -1

Query: 1577 SAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETLTGEEXXXXXX 1398
            + V+D+EKL+LPSLEAH  ++A +R  +Y G+VGP T+EN+  ++ATETLT +E      
Sbjct: 2    TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 61

Query: 1397 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKH-VEFSPKTESIHLGTVHYTDAERSLL 1221
                              A M   ++ A+   K  +  S  T +     +  T+ ER+ +
Sbjct: 62   SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQL--TERERASI 119

Query: 1220 GLQPLQAECRTEEE--EIIPVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 1047
                +  E   EEE  E  P+  S  LEPT EEL+LL+ Q++  IAVRS RQTE      
Sbjct: 120  IGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRT 179

Query: 1046 XXXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 870
                                 K P +QEVDY+DPLRYLR TTSSSRLLTANEE+QLS GI
Sbjct: 180  RAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGI 239

Query: 869  QVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 690
            Q             ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVI
Sbjct: 240  QDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVI 299

Query: 689  SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 510
            SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR
Sbjct: 300  SIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 359

Query: 509  TIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLD 330
            TIRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLLTPKAPRSLD
Sbjct: 360  TIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLD 419

Query: 329  QKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDG 150
            QKFGIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRFGLEDG
Sbjct: 420  QKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDG 479

Query: 149  RMKTLQEIGELMGVSRERIRQIESCAF 69
            RMKTLQEIGELMGVSRERIRQIES AF
Sbjct: 480  RMKTLQEIGELMGVSRERIRQIESSAF 506


>ref|XP_012434812.1| PREDICTED: RNA polymerase sigma factor sigB [Gossypium raimondii]
            gi|763778947|gb|KJB46070.1| hypothetical protein
            B456_007G347300 [Gossypium raimondii]
          Length = 578

 Score =  579 bits (1493), Expect = e-162
 Identities = 322/566 (56%), Positives = 395/566 (69%), Gaps = 9/566 (1%)
 Frame = -1

Query: 1739 MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTAS----- 1575
            M+CLLPQF  C PD                     K ++ +C R+QCVL+TT+++     
Sbjct: 1    MSCLLPQF-KCQPDTFSIQFRAHHSHHS-------KHKESICFRSQCVLSTTSSTSMATT 52

Query: 1574 AVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXXXX 1398
            AV+D+EKL+LPS EAH  S+  DR  +Y G+ GPP++ +   T+ATE L T +E      
Sbjct: 53   AVLDVEKLRLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAA 112

Query: 1397 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERSLLG 1218
                              A M  ++  A+ + K    S  T+++      +T+AER+ + 
Sbjct: 113  AAEAVALARAAAKVAKDAAIMVKNHGSAKTEMKSPG-SSATDTLTSKWGLFTEAERAGIV 171

Query: 1217 LQPLQAECRTEEEEIIP--VTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXX 1044
               +  E   EE+ +      +SD LEPT+EEL+LL+ QL+  IAVRS RQTE       
Sbjct: 172  GDYVSDELELEEDHLEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSHRQTERKAKRTR 231

Query: 1043 XXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQ 867
                                +   +Q++DY+DPLRYLRGTT++S+LLTANEEL+LSEGIQ
Sbjct: 232  AAEKAATNVVSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQ 291

Query: 866  VXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 687
                         ERCG  PT AQWAAAA VD+KTLR+RLNYG +C DKMIKSNIRLVIS
Sbjct: 292  DLLKLEGLHEELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICMDKMIKSNIRLVIS 351

Query: 686  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 507
            IAKNYQGAGMNLQDLVQEGCRGL+RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 352  IAKNYQGAGMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 411

Query: 506  IRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQ 327
            IRLPFHMVEATYRVKEARKQLF+E GRQPD+ E+AEATGLSMKRL AVLL PKAPRSLDQ
Sbjct: 412  IRLPFHMVEATYRVKEARKQLFSENGRQPDNIEVAEATGLSMKRLTAVLLAPKAPRSLDQ 471

Query: 326  KFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGR 147
            K GIN++LKPSE+I++P+ +++EDIL+KQFM++DLEKVL +L+PRE+QV+RWRFG+EDGR
Sbjct: 472  KIGINQNLKPSEVIADPEADSAEDILLKQFMKKDLEKVLDSLSPRERQVIRWRFGMEDGR 531

Query: 146  MKTLQEIGELMGVSRERIRQIESCAF 69
            +KTLQEIGE MGVSRERIRQIE CAF
Sbjct: 532  VKTLQEIGESMGVSRERIRQIELCAF 557


>ref|XP_008240611.1| PREDICTED: RNA polymerase sigma factor sigB [Prunus mume]
          Length = 643

 Score =  577 bits (1488), Expect = e-161
 Identities = 317/532 (59%), Positives = 379/532 (71%), Gaps = 10/532 (1%)
 Frame = -1

Query: 1634 KTRQPVCIRAQCVLTTTTASA------VVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGP 1473
            K+R P+C RAQ +L+T + S       V+D+EKL+LPSLE +  SLA +R  +Y G+ GP
Sbjct: 95   KSRDPLCFRAQSILSTASRSTSTGTTTVLDVEKLRLPSLEVNSDSLAANRPWTYTGATGP 154

Query: 1472 PTKENIEDTVATETL-TGEEXXXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKH 1296
            P + N   T+ATE L T EE                        A +   N  A+ +   
Sbjct: 155  PIEANFGATLATENLLTSEEAVIAAAAAEAVTLAKAALKVAKDVALLVSTNHSAKAESSS 214

Query: 1295 VEFSPKTESIHLGTVHYTDAER-SLLGLQPLQAECRTEEEEI-IPVTDSDSLEPTDEELE 1122
               SPKT ++H     + + ++ S LG          E   I + + +S+ +E T++E E
Sbjct: 215  -PVSPKTNALHFKWAKHMETKQPSRLGASMGSETALVENHFIQLAIKESEDVESTNQEFE 273

Query: 1121 LLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPL 945
            LLQ QL+  I  RS RQ E                           K A +Q+VD++DPL
Sbjct: 274  LLQEQLSEGITARSSRQIERKARRAKAAEKAAASVVSVKSGSTSRKKRASLQDVDHSDPL 333

Query: 944  RYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQK 765
            RYLR TT +SRLLTANEE++LSEGIQ             +RCGG+PT+AQWAAAAGVDQK
Sbjct: 334  RYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEELVQRCGGQPTIAQWAAAAGVDQK 393

Query: 764  TLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASK 585
            TLRKR+NYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQ+GCRGLVRGAEKFDASK
Sbjct: 394  TLRKRINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQQGCRGLVRGAEKFDASK 453

Query: 584  GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEI 405
            GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA+KQL++  GR P+D+E+
Sbjct: 454  GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEV 513

Query: 404  AEATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQD 225
            AEATGLSMKRL AVLLTPKAPRSL+QK GIN++LKPSE+I++PD ET+ED+L+K+FM+QD
Sbjct: 514  AEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEVIADPDAETAEDMLMKKFMKQD 573

Query: 224  LEKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
            LEKVL +LN REKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 574  LEKVLDSLNAREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 625


>gb|KDO49416.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
          Length = 525

 Score =  576 bits (1485), Expect = e-161
 Identities = 317/506 (62%), Positives = 369/506 (72%), Gaps = 3/506 (0%)
 Frame = -1

Query: 1577 SAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETLTGEEXXXXXX 1398
            + V+D+EKL+LPSLEAH  ++A +R  +Y G+VGP T+EN+  ++ATETLT +E      
Sbjct: 2    TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 61

Query: 1397 XXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERSLLG 1218
                              A M   ++ A+   K    S    +  +     T+ ER+ + 
Sbjct: 62   SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISSSADTNTSMWA-QLTERERASII 120

Query: 1217 LQPLQAECRTEEE--EIIPVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXX 1044
               +  E   EEE  E  P+  S  LEPT EEL+LL+ Q++  IAVRS RQTE       
Sbjct: 121  GDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTR 180

Query: 1043 XXXXXXXXXXXXXXXXXXXXKAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQ 867
                                K P +QEVDY+DPLRYLR TTSSSRLLTANEE+QLS GIQ
Sbjct: 181  AAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQ 240

Query: 866  VXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 687
                         ERCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVIS
Sbjct: 241  DLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVIS 300

Query: 686  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 507
            IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 301  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 360

Query: 506  IRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQ 327
            IRLPFHMVEATYRVKEARKQL++E GR P+++E+AEATGLSMKRL AVLL+PKAPRSLDQ
Sbjct: 361  IRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLSPKAPRSLDQ 420

Query: 326  KFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGR 147
            K GIN++LKPSE+I++P+ ET+ED+LIK+FM++DLEKVL TLNPRE+QVVRWRFGLEDGR
Sbjct: 421  KIGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGR 480

Query: 146  MKTLQEIGELMGVSRERIRQIESCAF 69
            MKTLQEIGELMGVSRERIRQIES AF
Sbjct: 481  MKTLQEIGELMGVSRERIRQIESSAF 506


>ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
            sylvestris]
          Length = 629

 Score =  572 bits (1474), Expect = e-160
 Identities = 337/606 (55%), Positives = 390/606 (64%), Gaps = 49/606 (8%)
 Frame = -1

Query: 1739 MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTA------ 1578
            M+ LLPQF + P                     L K R  + +R QC+L TT+A      
Sbjct: 13   MSYLLPQFKSLPDTFVLCFKTNQNSTIQ-----LSKGRDHIHLRTQCILATTSAATSTAT 67

Query: 1577 SAVVDMEKLQLPSLE----------------------------------AHLRSLAMDRS 1500
            S V+D+EKL+LPS+E                                  A+  S+A DR 
Sbjct: 68   STVLDIEKLKLPSIEILSSSVAAERSWKPPSTATSAVLDIPRLKLLSFEANPDSVAPDRP 127

Query: 1499 MSYVGSVGPPTKENIEDTVATETL-TGEEXXXXXXXXXXXXXXXXXXXXXXXXAFMGGDN 1323
             +Y G+VGPPT+ N +  +ATE L T +E                          + G N
Sbjct: 128  WTYTGAVGPPTEANTKSALATENLVTSDEAVVAAAAAEAVALAKAALKFAKDAVLLVGHN 187

Query: 1322 S-----DARLDHKHVEFSPKTESIHLGTVHYTDAERSLLGLQPLQAECRTEEEEIIP--V 1164
            +     DA         +   ES+ L     T   R  +G +   +E +  E  +    +
Sbjct: 188  NLKNSDDAGRGTLSEARTTPFESVPLAQPSETGRVR--VGAEFKGSEMKWSESSLFEDSL 245

Query: 1163 TDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXX 984
            TDSD LEP+ EELE+LQ QL+N IAV+S RQTE                           
Sbjct: 246  TDSDDLEPSPEELEILQSQLSNVIAVKSTRQTERKARRGRAAERAAANVVSVKSGSTSRK 305

Query: 983  K-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKP 807
            K   +QEVDY+DPLRYLRGTT SSRLLTA+EE +LS GIQ              RCGG+P
Sbjct: 306  KRTSVQEVDYSDPLRYLRGTTGSSRLLTASEEQELSRGIQDLLKLERLEQELAARCGGQP 365

Query: 806  TLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGC 627
            T+AQWAAAAGV+QKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGC
Sbjct: 366  TIAQWAAAAGVEQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGC 425

Query: 626  RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQ 447
            RGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQ
Sbjct: 426  RGLVRGAEKFDAAKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQ 485

Query: 446  LFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPSEIISNPDDE 267
            LF E GR P+D+E+AEATGLSMKRL AV+LTPKAPRSLDQK G N+SLKPSE+I++P+ E
Sbjct: 486  LFTENGRLPNDEEVAEATGLSMKRLTAVMLTPKAPRSLDQKIGFNQSLKPSEVIADPEAE 545

Query: 266  TSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQ 87
            TSE++L+KQFMRQDLEKVL TLNPREKQVV+WRFGL DGRMKTLQEIGELMGVSRERIRQ
Sbjct: 546  TSEEMLMKQFMRQDLEKVLDTLNPREKQVVKWRFGLADGRMKTLQEIGELMGVSRERIRQ 605

Query: 86   IESCAF 69
            IESCAF
Sbjct: 606  IESCAF 611


>ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
            tomentosiformis]
          Length = 641

 Score =  572 bits (1474), Expect = e-160
 Identities = 335/606 (55%), Positives = 392/606 (64%), Gaps = 49/606 (8%)
 Frame = -1

Query: 1739 MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTA------ 1578
            M+ LLPQF + P                     L K R  + +R QC+L TT+A      
Sbjct: 25   MSYLLPQFKSLPDTFVLCFKTNQNSTIQ-----LSKGRDHIHLRTQCILATTSAATSTAT 79

Query: 1577 SAVVDMEKLQLPSLE----------------------------------AHLRSLAMDRS 1500
            S V+D+EKL+LPS+E                                  A+  S+A DR 
Sbjct: 80   STVLDIEKLKLPSIEILSSSVAAERSWKPPSTATSAVLDIPRLKLLSFEANPDSVAPDRP 139

Query: 1499 MSYVGSVGPPTKENIEDTVATETL-TGEEXXXXXXXXXXXXXXXXXXXXXXXXAFMGGDN 1323
             +Y G VGPPT+ N +  +ATE L T +E                          + G N
Sbjct: 140  WTYTGPVGPPTEANTKSVLATENLVTSDEAVVAAAAAEAVALAKAALKFAKDVVLLVGHN 199

Query: 1322 S-----DARLDHKHVEFSPKTESIHLGTVHYTDAERSLLGLQPLQAECRTEEEEIIP--V 1164
            +     DA         +   ES+HL     T   R  +G +   +E +  E  ++   +
Sbjct: 200  NLKNSDDAGRGTLSEARTTPFESVHLAQPSETG--RVGVGAEFKGSEMKWSESSLLEDSL 257

Query: 1163 TDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXX 984
            TDSD L+P+ EELE+LQ QL+N IAV+S RQTE                           
Sbjct: 258  TDSDDLDPSPEELEILQSQLSNVIAVKSTRQTERKARRGRAAERAAANVVSVKSGSTSRK 317

Query: 983  K-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKP 807
            K   +QEVDY+DPLRYLRGTT SSRLLTA+EE +LS GIQ             +RCGG+P
Sbjct: 318  KRTSVQEVDYSDPLRYLRGTTGSSRLLTASEEQELSRGIQDQLKLERLEQELADRCGGQP 377

Query: 806  TLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGC 627
            T+AQWAAAAGV+QKTLRKRLNYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGC
Sbjct: 378  TIAQWAAAAGVEQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGC 437

Query: 626  RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQ 447
            RGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQ
Sbjct: 438  RGLVRGAEKFDAAKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQ 497

Query: 446  LFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPSEIISNPDDE 267
            LF E GR P+D+E+AEATGLSMKRL AV+LTPKAPRSLDQK G N+SLKPSE+I++P+ E
Sbjct: 498  LFTENGRLPNDEEVAEATGLSMKRLTAVMLTPKAPRSLDQKIGFNQSLKPSEVIADPEAE 557

Query: 266  TSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQ 87
            TSE++L+KQFMRQDLE+VL TLNPREKQVV+WRFGL DGRMKTLQEIGELMGVSRERIRQ
Sbjct: 558  TSEEMLMKQFMRQDLERVLDTLNPREKQVVKWRFGLADGRMKTLQEIGELMGVSRERIRQ 617

Query: 86   IESCAF 69
            IESCAF
Sbjct: 618  IESCAF 623


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB [Fragaria vesca subsp.
            vesca]
          Length = 616

 Score =  570 bits (1469), Expect = e-159
 Identities = 310/532 (58%), Positives = 379/532 (71%), Gaps = 10/532 (1%)
 Frame = -1

Query: 1634 KTRQPVCIRAQCVL------TTTTASAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGP 1473
            K R P+   AQ +       T+T  + ++DME+  LPSL  +  SL ++R  +Y G++GP
Sbjct: 68   KARYPISFCAQYMSSSTSHSTSTPTATLLDMEEFSLPSLTVNSDSLIVNRPWTYTGAIGP 127

Query: 1472 PTKENIEDTVATETL-TGEEXXXXXXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKH 1296
            PT+ N    +ATETL T EE                        A +  +N  A++++  
Sbjct: 128  PTEANYGAALATETLLTSEEAVIAAAAAEAVTLAKAALKVAKDVALLVSNNHYAKVENSS 187

Query: 1295 VEFSPKTESIHLGTVHYTDAERSLLGLQPLQAECRTEEEEI--IPVTDSDSLEPTDEELE 1122
               S  T + H+    + + E +L     + +E    E+    I + +S+++EP +EE E
Sbjct: 188  -PVSCGTSAFHINWAQHLETEPTLRIGDSMASETALVEDHFLQIAINESENVEPANEEFE 246

Query: 1121 LLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPL 945
            LLQ QL+N IA RS RQTE                           K A +Q+VD++DPL
Sbjct: 247  LLQEQLSNGIAARSSRQTERKARRTRAAEKAAASIVSVKSGSTSRKKRASLQDVDHSDPL 306

Query: 944  RYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQK 765
            RYLR TT +SRLLTANEE++LSEGIQ             +RCG +PT AQWAAAAGVDQK
Sbjct: 307  RYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQK 366

Query: 764  TLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASK 585
            TLRKR+NYGI+CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASK
Sbjct: 367  TLRKRVNYGIMCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASK 426

Query: 584  GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEI 405
            GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EA+KQL++  GR P+D+E+
Sbjct: 427  GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEV 486

Query: 404  AEATGLSMKRLMAVLLTPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQD 225
            AEATGLSMKRL AVLLTPKAPRSL+QK GIN++LKPS++I++PD ET+ED+L+K+FM+QD
Sbjct: 487  AEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSDVIADPDAETAEDLLMKKFMKQD 546

Query: 224  LEKVLCTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
            LEKVL +LNPREKQV+RWRFG+EDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 547  LEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAF 598


>gb|AKC88661.1| sigma factor [Melianthus villosus]
          Length = 565

 Score =  567 bits (1461), Expect = e-158
 Identities = 327/566 (57%), Positives = 387/566 (68%), Gaps = 9/566 (1%)
 Frame = -1

Query: 1739 MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTA------ 1578
            MACLLPQF   P +                     + R+ V  R QC+L TT+       
Sbjct: 1    MACLLPQF-KYPRETLFLQFRPHHYHHP-------RNREVVYFRPQCILCTTSTPTSEAT 52

Query: 1577 SAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATET--LTGEEXXXX 1404
            ++V++MEKL++P+LEAH  SLA++R  +Y+G++GPPT+ N+++T++ E   L  +E    
Sbjct: 53   TSVLEMEKLRMPTLEAHSTSLAVNRPWTYMGAIGPPTEGNLKETLSVEETLLADDEAVIA 112

Query: 1403 XXXXXXXXXXXXXXXXXXXXAFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERSL 1224
                                  +      A  + K V  S    S     V  T+ ER  
Sbjct: 113  AAAAEAVALARAAVEFAKDAVLIANSYQSANAESKPVISSKFDTS--WSNVQLTETER-- 168

Query: 1223 LGLQPLQAECRTEEEEIIPVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXX 1044
            +GL     E  T +  ++   +SD  EPT EELEL+Q +L N I VRS RQTE       
Sbjct: 169  VGL----LEDDTMQNAVL---ESDDAEPTHEELELIQEELFNNITVRSKRQTERKARRAR 221

Query: 1043 XXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQ 867
                                K   +QE+DY+D LRYLRGTTSSSRLLTANEELQLS GIQ
Sbjct: 222  AAEKAAANVVSVKSGSTSRKKHVSLQEIDYSDQLRYLRGTTSSSRLLTANEELQLSVGIQ 281

Query: 866  VXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 687
                         ERCG +PT AQ AAAAGVD+KTLRKRLN+GI+CK+KMIKSNIRLVIS
Sbjct: 282  DLLKLEKLQEELAERCGCQPTFAQCAAAAGVDKKTLRKRLNHGIICKNKMIKSNIRLVIS 341

Query: 686  IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 507
            IAKNYQGAGMNLQDLVQEGCRGL RGAEKFDASKGFKFSTYAHWWIKQA+RKSLSDQSRT
Sbjct: 342  IAKNYQGAGMNLQDLVQEGCRGLARGAEKFDASKGFKFSTYAHWWIKQAIRKSLSDQSRT 401

Query: 506  IRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKRLMAVLLTPKAPRSLDQ 327
            IRLPFHMVEATYRVKEARKQL++E GR PDD+EIAEATGLSMKRL AVLLTPKAPRSLDQ
Sbjct: 402  IRLPFHMVEATYRVKEARKQLYSENGRHPDDEEIAEATGLSMKRLTAVLLTPKAPRSLDQ 461

Query: 326  KFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNPREKQVVRWRFGLEDGR 147
            K GIN++LKPSE+I++P+ ET+ED+LIK+FM+QDLEKVL +LN REKQVVRWR+GL DGR
Sbjct: 462  KIGINQNLKPSEVIADPEVETAEDLLIKKFMKQDLEKVLNSLNLREKQVVRWRYGLVDGR 521

Query: 146  MKTLQEIGELMGVSRERIRQIESCAF 69
            +KTLQEIGELMGVSRERIRQIESCAF
Sbjct: 522  IKTLQEIGELMGVSRERIRQIESCAF 547


>ref|XP_009617776.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
            tomentosiformis]
          Length = 588

 Score =  566 bits (1458), Expect = e-158
 Identities = 336/582 (57%), Positives = 390/582 (67%), Gaps = 25/582 (4%)
 Frame = -1

Query: 1739 MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXSYLFKTRQPVCIRAQCVLTTTTASA--VV 1566
            M+CLLPQF  C PD                   L K R P  +R QCVL+TT+ +A  V+
Sbjct: 1    MSCLLPQF-KCLPDTFALSFKTHQQSAPQ----LSKGRDPYQLRTQCVLSTTSTAAATVL 55

Query: 1565 DMEKLQLPSLE-------AHLRSLAMD-----------RSMSYVGSVGPPTKENIEDTVA 1440
            D+EKLQLPS++       A+  + A+D           +S+ Y G V   T+ N +  +A
Sbjct: 56   DIEKLQLPSIDRSWEAPSANATTTAVDVQRLKLQSLEAQSLRYSGGVALSTEANTKAALA 115

Query: 1439 TETL-TGEEXXXXXXXXXXXXXXXXXXXXXXXXAFM-GGDNSDARLDHKHVEFSPKTESI 1266
            TE L TGEE                          M G +NSD  +    V+ +   E  
Sbjct: 116  TENLLTGEEAVIAASAAEAVALAKAALKVAKDAVMMVGHNNSDNNM--AGVDTTQLLERF 173

Query: 1265 HLGTVHYTDAERSLLGLQPLQAECRTEEEEII--PVTDSDSLEPTDEELELLQVQLTNRI 1092
              G         S++G +   +E R  E       +TDS+ LEPT EELELLQ  L N I
Sbjct: 174  QPGET----GRHSIVG-ELKASEMRWSESNSFGNSLTDSEDLEPTHEELELLQTDLLNGI 228

Query: 1091 AVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXK-APIQEVDYADPLRYLRGTTSSS 915
            AVRS RQ E                           K A +Q+VDY+DPLRYLRGTTS+S
Sbjct: 229  AVRSKRQNERKARRDRAAERAAANVVSVKSGFAGRKKRASVQDVDYSDPLRYLRGTTSTS 288

Query: 914  RLLTANEELQLSEGIQVXXXXXXXXXXXXERCGGKPTLAQWAAAAGVDQKTLRKRLNYGI 735
            RLLTA+EE +LSEGIQ             ERCGG+PT AQWAAAAGVD KTLRKR++YGI
Sbjct: 289  RLLTASEEHKLSEGIQELLKLERLQEELAERCGGQPTSAQWAAAAGVDLKTLRKRISYGI 348

Query: 734  LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 555
            LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Sbjct: 349  LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW 408

Query: 554  WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNEKGRQPDDKEIAEATGLSMKR 375
            WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++E GR PD++E+AEATGLSMKR
Sbjct: 409  WIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDEEELAEATGLSMKR 468

Query: 374  LMAVLLTPKAPRSLDQKFGINESLKPSEIISNPDDETSEDILIKQFMRQDLEKVLCTLNP 195
            L AV+LTPKAPRSLDQK G N++LKPSE+I++P+ +TSE+ LIKQFM+QDL+KVL TLNP
Sbjct: 469  LTAVMLTPKAPRSLDQKIGFNQNLKPSEVIADPEAKTSEETLIKQFMKQDLQKVLDTLNP 528

Query: 194  REKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 69
            RE+QV+RWRFGLEDGRMKTLQEIGELM VSRERIRQIES AF
Sbjct: 529  RERQVIRWRFGLEDGRMKTLQEIGELMSVSRERIRQIESSAF 570