BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00006172
         (1441 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub...   216   6e-72
emb|CBI35920.3| unnamed protein product [Vitis vinifera]              208   1e-69
ref|XP_004141689.1| PREDICTED: DNA-directed RNA polymerase I sub...   202   4e-68
ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I sub...   206   8e-68
ref|XP_008462335.1| PREDICTED: uncharacterized protein LOC103500...   196   8e-66
ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616...   189   1e-65
ref|XP_006426597.1| hypothetical protein CICLE_v10025597mg [Citr...   189   1e-65
ref|XP_004240985.1| PREDICTED: DNA-directed RNA polymerase I sub...   193   3e-63
ref|XP_010087702.1| DNA-directed RNA polymerase I subunit rpa49 ...   182   2e-62
ref|XP_006426598.1| hypothetical protein CICLE_v10025597mg [Citr...   178   2e-62
ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypep...   183   4e-62
ref|XP_009620774.1| PREDICTED: DNA-directed RNA polymerase I sub...   186   5e-62
ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I sub...   184   5e-62
ref|XP_008228244.1| PREDICTED: DNA-directed RNA polymerase I sub...   178   2e-61
ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49,...   192   2e-61
ref|XP_012068922.1| PREDICTED: DNA-directed RNA polymerase I sub...   181   5e-61
ref|XP_012068924.1| PREDICTED: DNA-directed RNA polymerase I sub...   181   5e-61
ref|XP_009769327.1| PREDICTED: DNA-directed RNA polymerase I sub...   184   5e-61
ref|XP_007215426.1| hypothetical protein PRUPE_ppa006096mg [Prun...   176   9e-61
ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603...   184   2e-60

>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Vitis
            vinifera]
          Length = 421

 Score =  216 bits (550), Expect(2) = 6e-72
 Identities = 127/277 (45%), Positives = 168/277 (60%), Gaps = 10/277 (3%)
 Frame = -2

Query: 1374 EELEMEVEDYSLXXXXXXXXXXKQPIDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDD 1195
            EE E E+   +L          K+ +++K+E+V E+ EKI PLVGYFP+G+DPHK    +
Sbjct: 2    EEEEPEISSQTLTLTPTKKRKKKKHVNVKMEVVHEHPEKIPPLVGYFPSGFDPHKPQDHE 61

Query: 1194 ------VKVYRH-VRRSRLELVVKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQT 1036
                  VKV+R+  R +RL+LVV P  SKVNFVGT+YSGEA +   C YALGV DKETQT
Sbjct: 62   SDPPPAVKVFRNKARANRLQLVVSPNDSKVNFVGTSYSGEAASAQVCTYALGVLDKETQT 121

Query: 1035 LKIVKIESNKIFRLEPKFAGKD---KVPEETKVEALTAQERAERLNDLTMALGTKKAKKQ 865
            LKIV I SNKIFRLEP+  G D     P        TA+E+A R+ DLT   GTKK+  Q
Sbjct: 122  LKIVPIASNKIFRLEPRVGGSDASVDEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQ 181

Query: 864  VREKANLNRKEDEETQKQMGEKIKKLKVLANATAGDDSEPARNIPYHDTTAETPERAYPI 685
             ++   LN+K+D  +QK +  K+K++ +   A     +  ARNIP +D TA TP+ AY +
Sbjct: 182  AKKLQALNQKDDPRSQKDLDRKLKEVVINKEALESTSAHSARNIPPYDDTATTPQEAYRL 241

Query: 684  EKIISKGENEILQKALHYLFYTEKVALEAFPIFVRNR 574
            +KII KGE + L   L  L    +V   A+  FV NR
Sbjct: 242  DKIIFKGEWDYLLDILDLLQAGVEVESSAYSSFVCNR 278



 Score = 84.7 bits (208), Expect(2) = 6e-72
 Identities = 50/121 (41%), Positives = 72/121 (59%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D++S+D  +SAK H+IP +L Q                R ++  K DLLIS+VLVL+L  
Sbjct: 309 DRNSMD-ASSAKHHKIPGILNQKFSSMFALDSDS----RRLTEEKKDLLISYVLVLTLYA 363

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           D+F ++P+DIA+DLRM+ +KLR H+              K+  ATLPVPL FP + Q+RR
Sbjct: 364 DEFRTDPSDIARDLRMSAVKLRAHF---EHLGCKLVSQNKVTMATLPVPLTFPRLRQKRR 420

Query: 158 K 156
           +
Sbjct: 421 R 421


>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  208 bits (530), Expect(2) = 1e-69
 Identities = 120/248 (48%), Positives = 155/248 (62%), Gaps = 10/248 (4%)
 Frame = -2

Query: 1287 IEMVKENQEKIAPLVGYFPTGYDPHKKAQDD------VKVYRH-VRRSRLELVVKPKGSK 1129
            +E+V E+ EKI PLVGYFP+G+DPHK    +      VKV+R+  R +RL+LVV P  SK
Sbjct: 1    MEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSPNDSK 60

Query: 1128 VNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKD---KVPE 958
            VNFVGT+YSGEA +   C YALGV DKETQTLKIV I SNKIFRLEP+  G D     P 
Sbjct: 61   VNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASVDEPS 120

Query: 957  ETKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKIKKLKVL 778
                   TA+E+A R+ DLT   GTKK+  Q ++   LN+K+D  +QK +  K+K++ + 
Sbjct: 121  SLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKLKEVVIN 180

Query: 777  ANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVALEA 598
              A     +  ARNIP +D TA TP+ AY ++KII KGE + L   L  L    +V   A
Sbjct: 181  KEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEVESSA 240

Query: 597  FPIFVRNR 574
            +  FV NR
Sbjct: 241  YSSFVCNR 248



 Score = 84.7 bits (208), Expect(2) = 1e-69
 Identities = 50/121 (41%), Positives = 72/121 (59%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D++S+D  +SAK H+IP +L Q                R ++  K DLLIS+VLVL+L  
Sbjct: 279 DRNSMD-ASSAKHHKIPGILNQKFSSMFALDSDS----RRLTEEKKDLLISYVLVLTLYA 333

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           D+F ++P+DIA+DLRM+ +KLR H+              K+  ATLPVPL FP + Q+RR
Sbjct: 334 DEFRTDPSDIARDLRMSAVKLRAHF---EHLGCKLVSQNKVTMATLPVPLTFPRLRQKRR 390

Query: 158 K 156
           +
Sbjct: 391 R 391


>ref|XP_004141689.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Cucumis
            sativus] gi|700190278|gb|KGN45511.1| hypothetical protein
            Csa_7G450680 [Cucumis sativus]
          Length = 435

 Score =  202 bits (515), Expect(2) = 4e-68
 Identities = 113/253 (44%), Positives = 159/253 (62%), Gaps = 11/253 (4%)
 Frame = -2

Query: 1299 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDD------VKVYRHVRR-SRLELVVKP 1141
            +D KI+++    +K  P+VGYFP+G+DPHK A  +       +VY+H  R +R++LVV P
Sbjct: 41   MDAKIQVLSNQPQKTPPVVGYFPSGFDPHKDADKEQSRSVRARVYKHKNRPNRMQLVVSP 100

Query: 1140 KGSKVNFVGTNYSGEAEAPIS-CQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKDKV 964
             GS V+FVGTNY GEA A    C YALGV DK TQ+LKIV I SN IFRL+PK  G D  
Sbjct: 101  TGSNVDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMIFRLDPKVRGSDVT 160

Query: 963  PEETKV---EALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKIK 793
              E+     E L+ Q++A R+ +LT   GTKK+KKQ ++   L +++D ET+  +  ++K
Sbjct: 161  ENESPSVANEELSGQDKANRMRELTALYGTKKSKKQAQKLHALKQEDDPETKSDLDGRMK 220

Query: 792  KLKVLANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEK 613
             + V   A  G  +E ARNIP ++ +A TP+ AYP++KII KGE   L+     L  T +
Sbjct: 221  NVVVNKEALEGTQAEVARNIPAYNASATTPQEAYPLDKIILKGEWSFLEDLYFRLQETAE 280

Query: 612  VALEAFPIFVRNR 574
            ++   +P FVRNR
Sbjct: 281  IS-ATYPSFVRNR 292



 Score = 85.5 bits (210), Expect(2) = 4e-68
 Identities = 50/121 (41%), Positives = 68/121 (56%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D+HS+   +SAK H+IP ML Q                R +S  K +LLISHVLVLSL  
Sbjct: 323 DQHSMGDVSSAKGHKIPSMLRQKFSSMFPTAES-----RRLSADKINLLISHVLVLSLFA 377

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           D+F+S+P DIA+DLR +   LR H+               ++ ATLP+PL FP + Q+RR
Sbjct: 378 DEFSSDPADIAKDLRTSPYDLRLHF---DNLGCKFIRKNNLSLATLPIPLQFPELRQKRR 434

Query: 158 K 156
           +
Sbjct: 435 R 435


>ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nelumbo
            nucifera]
          Length = 406

 Score =  206 bits (525), Expect(2) = 8e-68
 Identities = 116/250 (46%), Positives = 163/250 (65%), Gaps = 8/250 (3%)
 Frame = -2

Query: 1299 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDD---VKVYRHVRR-SRLELVVKPKGS 1132
            +D+K+E+  ++ +KI PLVGYFP+G++P +  ++D   V+VY +  R +RL+LVV P  S
Sbjct: 13   LDVKMEIFHQHPDKIPPLVGYFPSGFNPKRSEEEDSTKVRVYSNKNRPNRLQLVVSPNSS 72

Query: 1131 KVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAG---KDKVP 961
            KV FVGT+YS EA A   C YALGV DKETQTLKIV I SNKIFRLEP+  G    DK P
Sbjct: 73   KVEFVGTSYSSEAAAAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVRGSEVSDKEP 132

Query: 960  E-ETKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKIKKLK 784
              E + E LTA+++A+++ DLT   GTKK+  + ++  +L +KED  +Q  + +KI+   
Sbjct: 133  RGELQEEDLTAEQKADKIRDLTNLYGTKKSISRAKKMESLKQKEDPISQDAVDKKIEGFV 192

Query: 783  VLANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVAL 604
            +  +A        ARN+P HD TA TP++AYP+ KII KGE + L   L  L     ++ 
Sbjct: 193  INKDALETAAVYTARNVPPHDPTATTPDKAYPLNKIIFKGEWDYLLDVLELLQSGATISS 252

Query: 603  EAFPIFVRNR 574
            +A+P FV NR
Sbjct: 253  DAYPSFVCNR 262



 Score = 80.5 bits (197), Expect(2) = 8e-68
 Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D+ SVD  +SAK H+ P ++LQ                  ++  K DLLIS+VLVL+L +
Sbjct: 293 DQRSVDGASSAKYHKFPPIILQKFLTLFANSETY-----RLADDKQDLLISYVLVLTLFI 347

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFP-PMEQRR 162
           D F+++ +DIA+DLRMT + LR HY              K+   TLPVPL FP P  QRR
Sbjct: 348 DKFSTDMSDIAKDLRMTPVSLRLHY---QNLGCKLSRVDKLLMVTLPVPLQFPKPRTQRR 404

Query: 161 RK 156
           R+
Sbjct: 405 RR 406


>ref|XP_008462335.1| PREDICTED: uncharacterized protein LOC103500711 [Cucumis melo]
          Length = 436

 Score =  196 bits (497), Expect(2) = 8e-66
 Identities = 111/253 (43%), Positives = 157/253 (62%), Gaps = 11/253 (4%)
 Frame = -2

Query: 1299 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDD------VKVYRHVRR-SRLELVVKP 1141
            ++ KI+++    +KI P+VGYFP+G+DPHK A  +       +VY+H  + +R++LVV P
Sbjct: 42   MNAKIQVLSNQPQKIPPVVGYFPSGFDPHKDADKEQSHSVRARVYKHRNKPNRMQLVVSP 101

Query: 1140 KGSKVNFVGTNYSGEAEAPIS-CQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKDKV 964
             GS V+FVGTNY GEA A    C YALGV DK TQ+LKIV I SN I RL+PK  G D  
Sbjct: 102  TGSNVDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMILRLDPKVRGSDVS 161

Query: 963  PEETKV---EALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKIK 793
              E+     E L+ QE+A R+ +LT   GTKK+KKQ ++   L +++D ET+  +  ++K
Sbjct: 162  ENESPSVANEELSLQEKANRMRELTALYGTKKSKKQAQKLHALKQEDDPETKNDLDGRMK 221

Query: 792  KLKVLANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEK 613
             + V   A  G  +E ARNIP ++ +A TP+  YP++KII KGE   L+     L  T +
Sbjct: 222  NVVVNKEALEGTQAEIARNIPAYNASATTPQEVYPLDKIILKGEWSFLEDLYFRLRETAE 281

Query: 612  VALEAFPIFVRNR 574
            +    +P FVRNR
Sbjct: 282  IN-ATYPSFVRNR 293



 Score = 84.7 bits (208), Expect(2) = 8e-66
 Identities = 50/121 (41%), Positives = 68/121 (56%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D+HS+   +SAK H+IP ML Q                R +S  K +LLISHVLVL+L  
Sbjct: 324 DQHSMGDVSSAKGHKIPSMLRQKFSSMFPTAES-----RRLSADKINLLISHVLVLTLFA 378

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           D+F+S+P DIA+DLR +   LR H+               ++ ATLPVPL FP + Q+RR
Sbjct: 379 DEFSSDPADIAKDLRTSPYDLRLHF---DNLGCKFIRKNNLSLATLPVPLQFPELRQKRR 435

Query: 158 K 156
           +
Sbjct: 436 R 436


>ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616137 [Citrus sinensis]
            gi|641846247|gb|KDO65131.1| hypothetical protein
            CISIN_1g013236mg [Citrus sinensis]
          Length = 447

 Score =  189 bits (480), Expect(2) = 1e-65
 Identities = 102/252 (40%), Positives = 152/252 (60%), Gaps = 10/252 (3%)
 Frame = -2

Query: 1299 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDD-----VKVYRHV-----RRSRLELV 1150
            +  K++ + E   K  PLVGYFP+ Y P     D+     V+VYR++     R  R+ELV
Sbjct: 53   VKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELV 112

Query: 1149 VKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKD 970
            V P+ S V++VGT+YSGEA AP  C YA+GV D+ TQTLKIV I +NKIFRLEP+  G D
Sbjct: 113  VSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRSTQTLKIVPIAANKIFRLEPRVRGSD 172

Query: 969  KVPEETKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKIKK 790
               ++     ++A+ +A     L    GTKK+ +Q ++   LN++ D E+QK +  K+K 
Sbjct: 173  VADKDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDLALKMKS 232

Query: 789  LKVLANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKV 610
            +K+   A     S+   N+P +D  A TP++AYP++KII KGE + +Q   +++    +V
Sbjct: 233  VKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHVSAGSEV 292

Query: 609  ALEAFPIFVRNR 574
              +A+P FV NR
Sbjct: 293  ISDAYPSFVCNR 304



 Score = 90.5 bits (223), Expect(2) = 1e-65
 Identities = 55/121 (45%), Positives = 69/121 (57%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D+HS+D  ASAK HRIP++L Q                + +S  K  LLIS+VLVL+L  
Sbjct: 335 DQHSMDGGASAKQHRIPKILHQKFLTSFSDAES-----KRLSDDKIHLLISYVLVLTLHA 389

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           DDF +NPTDIA+DLRM+  KLR H+               +  ATLPVPL FP   QRRR
Sbjct: 390 DDFRTNPTDIAKDLRMSEFKLRDHF---EKLGCKLLREKNMLYATLPVPLQFPKAIQRRR 446

Query: 158 K 156
           +
Sbjct: 447 R 447


>ref|XP_006426597.1| hypothetical protein CICLE_v10025597mg [Citrus clementina]
            gi|557528587|gb|ESR39837.1| hypothetical protein
            CICLE_v10025597mg [Citrus clementina]
          Length = 447

 Score =  189 bits (480), Expect(2) = 1e-65
 Identities = 102/252 (40%), Positives = 152/252 (60%), Gaps = 10/252 (3%)
 Frame = -2

Query: 1299 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDD-----VKVYRHV-----RRSRLELV 1150
            +  K++ + E   K  PLVGYFP+ Y P     D+     V+VYR++     R  R+ELV
Sbjct: 53   VKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELV 112

Query: 1149 VKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKD 970
            V P+ S V++VGT+YSGEA AP  C YA+GV D+ TQTLKIV I +NKIFRLEP+  G D
Sbjct: 113  VSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRNTQTLKIVPIAANKIFRLEPRVRGSD 172

Query: 969  KVPEETKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKIKK 790
               ++     ++A+ +A     L    GTKK+ +Q ++   LN++ D E+QK +  K+K 
Sbjct: 173  VADKDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDLALKMKS 232

Query: 789  LKVLANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKV 610
            +K+   A     S+   N+P +D  A TP++AYP++KII KGE + +Q   +++    +V
Sbjct: 233  VKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHVSAGSEV 292

Query: 609  ALEAFPIFVRNR 574
              +A+P FV NR
Sbjct: 293  ISDAYPSFVCNR 304



 Score = 90.5 bits (223), Expect(2) = 1e-65
 Identities = 55/121 (45%), Positives = 69/121 (57%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D+HS+D  ASAK HRIP++L Q                + +S  K  LLIS+VLVL+L  
Sbjct: 335 DQHSMDGGASAKQHRIPKILHQKFLTSFSDAES-----KRLSDDKIHLLISYVLVLTLHA 389

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           DDF +NPTDIA+DLRM+  KLR H+               +  ATLPVPL FP   QRRR
Sbjct: 390 DDFRTNPTDIAKDLRMSEFKLRDHF---EKLGCKLLREKNMLYATLPVPLQFPKAIQRRR 446

Query: 158 K 156
           +
Sbjct: 447 R 447


>ref|XP_004240985.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Solanum
            lycopersicum]
          Length = 410

 Score =  193 bits (490), Expect(2) = 3e-63
 Identities = 111/250 (44%), Positives = 156/250 (62%), Gaps = 12/250 (4%)
 Frame = -2

Query: 1287 IEMVKENQEKIAPLVGYFPTGYDPHKKAQDDV-----KVYRHVRRS-RLELVVKPKGSKV 1126
            +E + EN   I+P+VGYFP+GYDP +   D V     K+YR+VRR+ RL++VV P GS+V
Sbjct: 21   METIAENPNNISPMVGYFPSGYDPLRNTNDGVEELSTKLYRNVRRNNRLQVVVSPYGSQV 80

Query: 1125 NFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKDKVPE---- 958
            +FVGTNYSGEA +   C Y+LG+ DKETQTLKIV I +NKI RLEP+  G + VP+    
Sbjct: 81   DFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIAANKIIRLEPRVRGSE-VPDAEDP 139

Query: 957  ETKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKIKKL--K 784
            +T  + LTA+ER +++ +LT    +KK+ +Q R+  +L ++ED   Q++    I     K
Sbjct: 140  DTAKQELTAEERNDKMRELTQMYSSKKSIRQARKLDSLRQQEDTGNQEEFDRNIAGAINK 199

Query: 783  VLANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVAL 604
                 T   DS  ARNIP HD  A  P+ AYP+++IISKGE + L           ++  
Sbjct: 200  EALEVTVATDS--ARNIPPHDLDATIPQLAYPLDRIISKGEWDFLLDIFELTEAGAEMTP 257

Query: 603  EAFPIFVRNR 574
            + +P FVRNR
Sbjct: 258  DLYPSFVRNR 267



 Score = 78.6 bits (192), Expect(2) = 3e-63
 Identities = 48/121 (39%), Positives = 66/121 (54%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           DKHS+D  +SAK H+ P +L Q                + +   K  LLI++VLVL+L  
Sbjct: 298 DKHSMDGVSSAKHHKFPGILSQKFTSMFSISDS-----KRLPEEKVTLLINYVLVLTLFA 352

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           DDF S+P+DIA+DLR+  + LRP Y               I  ATLPVPL FP + ++RR
Sbjct: 353 DDFRSDPSDIAKDLRINAVALRPFY---EYLGCKLVREKNIVLATLPVPLVFPGVRRKRR 409

Query: 158 K 156
           +
Sbjct: 410 R 410


>ref|XP_010087702.1| DNA-directed RNA polymerase I subunit rpa49 [Morus notabilis]
            gi|587839011|gb|EXB29690.1| DNA-directed RNA polymerase I
            subunit rpa49 [Morus notabilis]
          Length = 438

 Score =  182 bits (462), Expect(2) = 2e-62
 Identities = 107/254 (42%), Positives = 154/254 (60%), Gaps = 12/254 (4%)
 Frame = -2

Query: 1299 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDD------VKVYRHVRR-SRLELVVKP 1141
            ++  I++V+   E+  PLVGYFP+G+DP K   D+       +V+R+  +  RL+LVV P
Sbjct: 43   VEATIQVVQNQPERAPPLVGYFPSGFDP-KDGDDESSATAMARVFRNRNKPKRLQLVVSP 101

Query: 1140 KGSKVNFVGTNYSGEAEAPIS-CQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKDKV 964
             G+ V+FVGTNYSGEAEA    C YALGV DKETQTLKIV I SNKIFRLEPK  G  ++
Sbjct: 102  NGANVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVRGL-RL 160

Query: 963  PEETKVEAL----TAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKI 796
            P +          +A  ++E++  LT   GT K+ ++ +++  L + +D ETQK M EKI
Sbjct: 161  PNKDSGSLAEGERSALSKSEKIKGLTDRYGTNKSIREAKKRDALYQNDDPETQKDMDEKI 220

Query: 795  KKLKVLANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTE 616
            K++ +  +A         RNIP ++  A + + AYPIEKII KGE + L+     L    
Sbjct: 221  KQIVIKKDALESTQVHTDRNIPPYNAAATSSQEAYPIEKIILKGEWDFLEDIYRLLQEEA 280

Query: 615  KVALEAFPIFVRNR 574
            ++  + +P F+ NR
Sbjct: 281  ELKSDDYPSFISNR 294



 Score = 87.0 bits (214), Expect(2) = 2e-62
 Identities = 52/122 (42%), Positives = 70/122 (57%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D HS+D  +SAK H+ P +L Q                ++++  +NDLLIS+VLVL+L  
Sbjct: 325 DLHSMDGVSSAKRHKFPSILRQKFSAMFLSSEV-----KKLASKENDLLISYVLVLTLYA 379

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           D F +N TDIA+DLRMT++ LR HY               +  ATLPVPL FP + QRRR
Sbjct: 380 DRFQTNLTDIAKDLRMTSVTLRVHY---EQLGCKLVRQNNLWFATLPVPLQFPDLRQRRR 436

Query: 158 KK 153
           K+
Sbjct: 437 KR 438


>ref|XP_006426598.1| hypothetical protein CICLE_v10025597mg [Citrus clementina]
            gi|557528588|gb|ESR39838.1| hypothetical protein
            CICLE_v10025597mg [Citrus clementina]
          Length = 426

 Score =  178 bits (452), Expect(2) = 2e-62
 Identities = 95/234 (40%), Positives = 142/234 (60%), Gaps = 10/234 (4%)
 Frame = -2

Query: 1299 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDD-----VKVYRHV-----RRSRLELV 1150
            +  K++ + E   K  PLVGYFP+ Y P     D+     V+VYR++     R  R+ELV
Sbjct: 53   VKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELV 112

Query: 1149 VKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKD 970
            V P+ S V++VGT+YSGEA AP  C YA+GV D+ TQTLKIV I +NKIFRLEP+  G D
Sbjct: 113  VSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRNTQTLKIVPIAANKIFRLEPRVRGSD 172

Query: 969  KVPEETKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKIKK 790
               ++     ++A+ +A     L    GTKK+ +Q ++   LN++ D E+QK +  K+K 
Sbjct: 173  VADKDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDLALKMKS 232

Query: 789  LKVLANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYL 628
            +K+   A     S+   N+P +D  A TP++AYP++KII KGE + +Q   +++
Sbjct: 233  VKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHV 286



 Score = 90.5 bits (223), Expect(2) = 2e-62
 Identities = 55/121 (45%), Positives = 69/121 (57%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D+HS+D  ASAK HRIP++L Q                + +S  K  LLIS+VLVL+L  
Sbjct: 314 DQHSMDGGASAKQHRIPKILHQKFLTSFSDAES-----KRLSDDKIHLLISYVLVLTLHA 368

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           DDF +NPTDIA+DLRM+  KLR H+               +  ATLPVPL FP   QRRR
Sbjct: 369 DDFRTNPTDIAKDLRMSEFKLRDHF---EKLGCKLLREKNMLYATLPVPLQFPKAIQRRR 425

Query: 158 K 156
           +
Sbjct: 426 R 426


>ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus
            communis] gi|223539445|gb|EEF41035.1| DNA-directed RNA
            polymerase I 49 kDa polypeptide, putative [Ricinus
            communis]
          Length = 481

 Score =  183 bits (465), Expect(2) = 4e-62
 Identities = 110/282 (39%), Positives = 154/282 (54%), Gaps = 39/282 (13%)
 Frame = -2

Query: 1302 PIDLKIEMVKENQEKIAPLVGYFPTGYDPHKK-------------------AQDDVKVYR 1180
            P+++KIE++ +  +K  P+VGYFP+GY P K                    +Q  VK YR
Sbjct: 57   PLNVKIEVIYDQTDKTPPIVGYFPSGYKPSKHNESNNLHDTSNEENATSSLSQPSVKFYR 116

Query: 1179 HVRRS-----------------RLELVVKPKGSKVNFVGTNYSGEAEAPISCQYALGVFD 1051
            + +R+                 R+ELVV P GS V+FVG +Y GEA A   C YALGV D
Sbjct: 117  NAQRTKIEKSSNERNEKWRSSERMELVVSPNGSNVDFVGKSYKGEATAAQLCTYALGVLD 176

Query: 1050 KETQTLKIVKIESNKIFRLEPKFAG---KDKVPEETKVEALTAQERAERLNDLTMALGTK 880
            K+T+TLKI+ I  NKIFRLEPK  G    DK P   + E L+ +  A R   LT   GTK
Sbjct: 177  KKTKTLKIMPIAGNKIFRLEPKIQGVDASDKEPSVLENEDLSKENMAVRKKTLTDTYGTK 236

Query: 879  KAKKQVREKANLNRKEDEETQKQMGEKIKKLKVLANATAGDDSEPARNIPYHDTTAETPE 700
            K+  Q +    + + ++ E++K + +KI  + V   A     +  ARNIP H+T+A TP+
Sbjct: 237  KSITQGKRMEIMMQGDNPESRKDLDQKIDNVVVNKAALEDTSAHVARNIPPHNTSATTPQ 296

Query: 699  RAYPIEKIISKGENEILQKALHYLFYTEKVALEAFPIFVRNR 574
             AYP+ +II  GE + L+     L   E  A+ A+P+FVRNR
Sbjct: 297  EAYPLGRIILTGEWDYLEDLYEILQAGEGAAINAYPVFVRNR 338



 Score = 84.7 bits (208), Expect(2) = 4e-62
 Identities = 50/122 (40%), Positives = 70/122 (57%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D HS+D  +SAK+H+ P +L Q                R++   K DLLIS+VLVLSL  
Sbjct: 369 DLHSMDGVSSAKNHKFPSILRQKFMGMFTPES------RKLPVEKIDLLISYVLVLSLYA 422

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           DDF ++PTDIA+DLR++ + +R H+              K++ ATLPVPL FP   QRR 
Sbjct: 423 DDFRTDPTDIAKDLRVSRVMVRTHF---ENLGCKIVCENKLSLATLPVPLKFPVQRQRRA 479

Query: 158 KK 153
           ++
Sbjct: 480 RR 481


>ref|XP_009620774.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nicotiana
            tomentosiformis]
          Length = 442

 Score =  186 bits (472), Expect(2) = 5e-62
 Identities = 104/243 (42%), Positives = 150/243 (61%), Gaps = 5/243 (2%)
 Frame = -2

Query: 1287 IEMVKENQEKIAPLVGYFPTGYDPHKKAQDDVKVYRHVRRS-RLELVVKPKGSKVNFVGT 1111
            IE + EN  K +P+VGYF +GYDP +   +  ++YR+V+R+ RL+LVV P G++V+FVGT
Sbjct: 58   IETIAENPNKTSPIVGYFSSGYDPLRNNNNSAQLYRNVKRNNRLQLVVSPNGAQVDFVGT 117

Query: 1110 NYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKDKVPE----ETKVE 943
            NYSGEA +   C Y+LGV DKETQTLKIV I +NKI RLEP+  G D VPE    +T  +
Sbjct: 118  NYSGEATSAQLCTYSLGVLDKETQTLKIVPIAANKIIRLEPRVRGSD-VPENEDPDTVKQ 176

Query: 942  ALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKIKKLKVLANATA 763
             LTA+ER +++ +LT    +KK+ +Q R+  +L ++ED   Q++    I           
Sbjct: 177  ELTAEERNDKMRELTQMYSSKKSIRQARKLDSLRQQEDTGNQEEFDRNIAGAINKEALEV 236

Query: 762  GDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVALEAFPIFV 583
               ++ ARNIP HD  A  P+ AYP+ +II +GE + L   L       ++  + +P FV
Sbjct: 237  AITTDNARNIPPHDLAATVPQLAYPLNRIILEGEWDYLLDVLKLTEAGAEMKPDLYPSFV 296

Query: 582  RNR 574
             NR
Sbjct: 297  CNR 299



 Score = 81.6 bits (200), Expect(2) = 5e-62
 Identities = 50/121 (41%), Positives = 66/121 (54%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           DKHS+D  +SAK H+IP ML Q                + +   K  LLI++VLVL+L V
Sbjct: 330 DKHSMDGVSSAKHHKIPGMLFQKFSSMFAVPDS-----KRLPEEKKSLLINYVLVLTLFV 384

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           DDF S+ +DIA+DLRM    LRPHY               +  ATLPVPL F  + ++RR
Sbjct: 385 DDFRSDLSDIAKDLRMNIGTLRPHY---EYLGCKLVREKHVLLATLPVPLKFQTVRRKRR 441

Query: 158 K 156
           +
Sbjct: 442 R 442


>ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Eucalyptus
            grandis] gi|629104338|gb|KCW69807.1| hypothetical protein
            EUGRSUZ_F03167 [Eucalyptus grandis]
          Length = 415

 Score =  184 bits (467), Expect(2) = 5e-62
 Identities = 103/258 (39%), Positives = 161/258 (62%), Gaps = 14/258 (5%)
 Frame = -2

Query: 1305 QPIDLKIEMVKENQEKIAPLVGYFPTGYDPHKKA---------QDDVKVYRHVR-RSRLE 1156
            + +   I  + ++ +KI PLVGYFP+G+DP             +  V+VYR+ +  +RL+
Sbjct: 17   EKLSATIHALPDSADKIPPLVGYFPSGFDPSSGGGGGGGDPPEEPGVRVYRNGKWPNRLQ 76

Query: 1155 LVVKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAG 976
            LVV+P  S V FVG++ SGE     SC YALGV DKE+QTLK+V I  NKIFRLEP+ A 
Sbjct: 77   LVVRPPESNVTFVGSSSSGEYTGVQSCTYALGVLDKESQTLKVVPIACNKIFRLEPRVAS 136

Query: 975  KDKVPEETKVEA----LTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQM 808
               +PEE   E     ++A+E+A+++ +L +  GTK++  Q ++  +L +++D  +QK +
Sbjct: 137  D--LPEEEPPELGRGEISAKEKADKVRELNLLFGTKRSVTQDKKMQSLRQEDDPNSQKDL 194

Query: 807  GEKIKKLKVLANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYL 628
              KIK++ +   A    D+  ARNIP ++++A  P+ AYP+EKII KGE + ++    +L
Sbjct: 195  DRKIKEVAINKEALESTDAHIARNIPPYNSSATVPKDAYPLEKIILKGEWDYIKDIFQFL 254

Query: 627  FYTEKVALEAFPIFVRNR 574
               +KV+ +A+P FV NR
Sbjct: 255  EEGQKVSPDAYPTFVCNR 272



 Score = 83.6 bits (205), Expect(2) = 5e-62
 Identities = 47/121 (38%), Positives = 69/121 (57%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D+HS D  +S+K+H+IP +L Q                + +   K DLLIS+VLVL+L  
Sbjct: 303 DQHSADGASSSKNHKIPSILRQKFSTMFSNAES-----KWLPSEKIDLLISYVLVLTLFA 357

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           DDF ++PTDIA+DLRM+++ +R H+               +  A LPVPL FP + +RRR
Sbjct: 358 DDFRTDPTDIAKDLRMSSVTIRQHF---EHLGCKFSREKNVLYAKLPVPLKFPELRRRRR 414

Query: 158 K 156
           +
Sbjct: 415 R 415


>ref|XP_008228244.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Prunus mume]
          Length = 427

 Score =  178 bits (451), Expect(2) = 2e-61
 Identities = 101/249 (40%), Positives = 153/249 (61%), Gaps = 7/249 (2%)
 Frame = -2

Query: 1299 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQD---DVKVYRHVRRSR-LELVVKPKGS 1132
            +   I++V +  EK  PLVGYFP  +DP K       DV ++R  ++ R L++VV P G+
Sbjct: 34   VQATIQVVPDIPEKTPPLVGYFPCSFDPTKSPYSNSTDVGLFRDSKKPRRLQIVVTPNGT 93

Query: 1131 KVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKD---KVP 961
             V+FVGTNY+GEA    SC +ALGV DK TQTLKI+ + SNKIFRL+P   G +   K P
Sbjct: 94   NVDFVGTNYTGEATTGQSCNFALGVLDKATQTLKILPVASNKIFRLQPMVRGYNYSAKEP 153

Query: 960  EETKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKIKKLKV 781
            E +  E LT +E+AE+  +L    GTKKA ++ ++  +L +++  E+QK +  KIK +  
Sbjct: 154  ESSVKEQLTGEEKAEKQMELQSRYGTKKAIRESKKLRSLKQEDGPESQKDLDAKIKLIVP 213

Query: 780  LANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVALE 601
               A    +S+ +R+IP  + +A TP+ A+P++KII  GE ++L     +     +V+ +
Sbjct: 214  NKEALESTESQISRHIPPFNESATTPQEAFPLDKIILTGEWDLLGDIYEHFQGGAEVSWD 273

Query: 600  AFPIFVRNR 574
            AFP FV +R
Sbjct: 274  AFPRFVCHR 282



 Score = 87.8 bits (216), Expect(2) = 2e-61
 Identities = 50/124 (40%), Positives = 71/124 (57%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D+HS+D  +S++ HRIP +L                  + +S  K +LLIS+VLVL+L V
Sbjct: 313 DQHSMDGISSSRTHRIPNLLFHKFSTMFPMES------KSLSNEKTNLLISYVLVLTLFV 366

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           D+F ++ TDIA+DLRM+ + LR HY               +  ATLPVPL FP + QRR+
Sbjct: 367 DEFETDLTDIAKDLRMSAIALRKHY---ENLGCKLVRKRNVMFATLPVPLQFPQLRQRRQ 423

Query: 158 KKGR 147
           K+ R
Sbjct: 424 KRNR 427


>ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49, putative [Theobroma
            cacao] gi|508776735|gb|EOY23991.1| DNA-directed RNA
            polymerase I subunit rpa49, putative [Theobroma cacao]
          Length = 457

 Score =  192 bits (487), Expect(2) = 2e-61
 Identities = 114/270 (42%), Positives = 162/270 (60%), Gaps = 30/270 (11%)
 Frame = -2

Query: 1293 LKIEMVKENQEKIAPLVGYFPTGYDP----------------------HKKAQDDVKVYR 1180
            +KI++ ++   KI PLV YFP+GY+P                      +K  Q  VKVYR
Sbjct: 45   VKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQGEEEEEEEEEGPDNKSNQPRVKVYR 104

Query: 1179 HV---RRSRLELVVKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESN 1009
            ++   + +RL++VV P GS V+FVG+NYSGEA A   C+Y+LGV D+ET+TLKI+ I SN
Sbjct: 105  NMAQRKTNRLQVVVSPSGSNVDFVGSNYSGEAAAAQVCRYSLGVLDRETRTLKIIPIASN 164

Query: 1008 KIFRLEPKF-----AGKDKVPEETKVEALTAQERAERLNDLTMALGTKKAKKQVREKANL 844
            KIFRLEP+      A KD V    K E LT +++ +++ +LT   GTKK +K+ ++  NL
Sbjct: 165  KIFRLEPRVRSSETANKD-VSSSVKSE-LTTEDKEDKMGELTALYGTKKDRKKRKDLNNL 222

Query: 843  NRKEDEETQKQMGEKIKKLKVLANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKG 664
             ++ D E+QK + EKI+++     A     +  ARNIP HD++A TP  AYP++KII KG
Sbjct: 223  KKEVDPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDSSATTPVEAYPLDKIILKG 282

Query: 663  ENEILQKALHYLFYTEKVALEAFPIFVRNR 574
            + E L      L    +VA  A+P FV NR
Sbjct: 283  DWEFLGDIYGLLEVGAEVASNAYPTFVCNR 312



 Score = 73.6 bits (179), Expect(2) = 2e-61
 Identities = 46/122 (37%), Positives = 67/122 (54%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D+ S+D  ASAK H+IP ++ Q                R+ S  + +LLIS+VLVL+L  
Sbjct: 343 DQFSMDRVASAKGHKIPSIIRQRFFTMFTDPGL-----RKPSRDQINLLISYVLVLTLHA 397

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           D F ++P+DIA+DLRM+++ LRPH+                   TLPVPL FP    +R+
Sbjct: 398 DGFRTDPSDIAKDLRMSSIGLRPHF---ENLGCKLVRENNSIFTTLPVPLKFPSETLKRQ 454

Query: 158 KK 153
           +K
Sbjct: 455 RK 456


>ref|XP_012068922.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 isoform X1
            [Jatropha curcas] gi|802577298|ref|XP_012068923.1|
            PREDICTED: DNA-directed RNA polymerase I subunit rpa49
            isoform X1 [Jatropha curcas]
          Length = 466

 Score =  181 bits (460), Expect(2) = 5e-61
 Identities = 107/268 (39%), Positives = 148/268 (55%), Gaps = 24/268 (8%)
 Frame = -2

Query: 1305 QPIDLKIEMVKENQEKIAPLVGYFPTGYDPHKKA------QDDVKVYRHVRRS------- 1165
            Q +D+K+E + +  ++ AP+VGYFP+GY P K        Q  V+ YR  R         
Sbjct: 53   QSVDVKVEAIYDRADRSAPIVGYFPSGYKPQKNEENLSPQQSTVRFYRSTRAKMEKSSSE 112

Query: 1164 ---------RLELVVKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIES 1012
                     RLELVV P  S V+FVG +Y GEA A   C YALGVFDK TQTLKIV I  
Sbjct: 113  KDEKRRTSERLELVVSPHWSNVDFVGKSYKGEAMAAQLCTYALGVFDKMTQTLKIVPIAG 172

Query: 1011 NKIFRLEPKFAGKDKVPEETKV--EALTAQERAERLNDLTMALGTKKAKKQVREKANLNR 838
            NKIFRLEPK  G D   EE  V     + + R ++  +L +  GTK++    ++   L +
Sbjct: 173  NKIFRLEPKVRGLDTADEEPSVLENEPSGENRTDKRRELAVLYGTKRSIAGDKKLQALRQ 232

Query: 837  KEDEETQKQMGEKIKKLKVLANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGEN 658
             ++ E+Q+ +G KI  + V   A A   ++ ARNIP ++++A TP+ AYP+  II  GE 
Sbjct: 233  GDNPESQEDLGNKIDNIVVNKEALASTSAQVARNIPPYNSSATTPQEAYPLNGIILAGEW 292

Query: 657  EILQKALHYLFYTEKVALEAFPIFVRNR 574
            + L+     L     V+  A+P FVRNR
Sbjct: 293  DFLEDVYEILKTGAGVSSNAYPTFVRNR 320



 Score = 82.8 bits (203), Expect(2) = 5e-61
 Identities = 53/125 (42%), Positives = 69/125 (55%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D HS+D  ASAK+HR P +L Q                R +   K DLLIS+VLVL+L V
Sbjct: 351 DMHSLDGAASAKNHRFPSILRQKFMNMFTPGS------RTLPIEKIDLLISYVLVLTLYV 404

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           DDF SNPTDIA+DLRM+ + LR H+              K   ATLPVPL F  +++ R 
Sbjct: 405 DDFRSNPTDIAKDLRMSPVDLRVHF---ENLGCKGVNENKSFVATLPVPLKFQTVKRGRG 461

Query: 158 KKGRK 144
           +  ++
Sbjct: 462 RPRKR 466


>ref|XP_012068924.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 isoform X2
            [Jatropha curcas] gi|643733893|gb|KDP40736.1|
            hypothetical protein JCGZ_24735 [Jatropha curcas]
          Length = 458

 Score =  181 bits (460), Expect(2) = 5e-61
 Identities = 107/268 (39%), Positives = 148/268 (55%), Gaps = 24/268 (8%)
 Frame = -2

Query: 1305 QPIDLKIEMVKENQEKIAPLVGYFPTGYDPHKKA------QDDVKVYRHVRRS------- 1165
            Q +D+K+E + +  ++ AP+VGYFP+GY P K        Q  V+ YR  R         
Sbjct: 45   QSVDVKVEAIYDRADRSAPIVGYFPSGYKPQKNEENLSPQQSTVRFYRSTRAKMEKSSSE 104

Query: 1164 ---------RLELVVKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIES 1012
                     RLELVV P  S V+FVG +Y GEA A   C YALGVFDK TQTLKIV I  
Sbjct: 105  KDEKRRTSERLELVVSPHWSNVDFVGKSYKGEAMAAQLCTYALGVFDKMTQTLKIVPIAG 164

Query: 1011 NKIFRLEPKFAGKDKVPEETKV--EALTAQERAERLNDLTMALGTKKAKKQVREKANLNR 838
            NKIFRLEPK  G D   EE  V     + + R ++  +L +  GTK++    ++   L +
Sbjct: 165  NKIFRLEPKVRGLDTADEEPSVLENEPSGENRTDKRRELAVLYGTKRSIAGDKKLQALRQ 224

Query: 837  KEDEETQKQMGEKIKKLKVLANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGEN 658
             ++ E+Q+ +G KI  + V   A A   ++ ARNIP ++++A TP+ AYP+  II  GE 
Sbjct: 225  GDNPESQEDLGNKIDNIVVNKEALASTSAQVARNIPPYNSSATTPQEAYPLNGIILAGEW 284

Query: 657  EILQKALHYLFYTEKVALEAFPIFVRNR 574
            + L+     L     V+  A+P FVRNR
Sbjct: 285  DFLEDVYEILKTGAGVSSNAYPTFVRNR 312



 Score = 82.8 bits (203), Expect(2) = 5e-61
 Identities = 53/125 (42%), Positives = 69/125 (55%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D HS+D  ASAK+HR P +L Q                R +   K DLLIS+VLVL+L V
Sbjct: 343 DMHSLDGAASAKNHRFPSILRQKFMNMFTPGS------RTLPIEKIDLLISYVLVLTLYV 396

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           DDF SNPTDIA+DLRM+ + LR H+              K   ATLPVPL F  +++ R 
Sbjct: 397 DDFRSNPTDIAKDLRMSPVDLRVHF---ENLGCKGVNENKSFVATLPVPLKFQTVKRGRG 453

Query: 158 KKGRK 144
           +  ++
Sbjct: 454 RPRKR 458


>ref|XP_009769327.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like isoform
            X1 [Nicotiana sylvestris]
          Length = 446

 Score =  184 bits (466), Expect(2) = 5e-61
 Identities = 103/243 (42%), Positives = 148/243 (60%), Gaps = 5/243 (2%)
 Frame = -2

Query: 1287 IEMVKENQEKIAPLVGYFPTGYDPHKKAQDDVKVYRHVRRS-RLELVVKPKGSKVNFVGT 1111
            IE + E+  K +P+VGYF +GYDP +    + ++YR+V+R+ RL+LVV P G+ V+FVGT
Sbjct: 62   IETIAESPNKTSPIVGYFSSGYDPLRNNDSNAQLYRNVKRNNRLQLVVSPNGAPVDFVGT 121

Query: 1110 NYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKDKVPE----ETKVE 943
            NYSGEA +   C Y+LGV DKETQTLKIV I +NKI RLEP+  G D  PE    +T  +
Sbjct: 122  NYSGEATSAQLCTYSLGVLDKETQTLKIVPIAANKIIRLEPRVRGSD-APENEDPDTVKQ 180

Query: 942  ALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKIKKLKVLANATA 763
             LTA+ER +++ +LT    +KK+ +Q R+  +L ++ED   Q++    I           
Sbjct: 181  ELTAEERTDKMRELTQMYSSKKSIRQARKLDSLRQQEDTGNQEEFDRNIAGAINKEALEV 240

Query: 762  GDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVALEAFPIFV 583
               ++ ARNIP HD  A  PE AYP+ +II +GE + L   L       ++  + +P FV
Sbjct: 241  AVTTDNARNIPPHDLAATAPELAYPLNRIILEGEWDYLLDVLKLTEAGAEMKPDLYPSFV 300

Query: 582  RNR 574
             NR
Sbjct: 301  CNR 303



 Score = 80.5 bits (197), Expect(2) = 5e-61
 Identities = 50/121 (41%), Positives = 66/121 (54%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           DKHS+D  +SAK H+IP ML Q                + +   K  LLI++VLVL+L V
Sbjct: 334 DKHSMDGVSSAKHHKIPGMLFQKFSSMFAVPDS-----KRIPDEKKALLINYVLVLTLFV 388

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           DDF S+ +DIA+DLRM    LRPHY               +  ATLPVPL F  + ++RR
Sbjct: 389 DDFRSDLSDIAKDLRMDIGALRPHY---EYLGCKLVREKHVLLATLPVPLKFQTVRRKRR 445

Query: 158 K 156
           +
Sbjct: 446 R 446


>ref|XP_007215426.1| hypothetical protein PRUPE_ppa006096mg [Prunus persica]
            gi|462411576|gb|EMJ16625.1| hypothetical protein
            PRUPE_ppa006096mg [Prunus persica]
          Length = 427

 Score =  176 bits (447), Expect(2) = 9e-61
 Identities = 101/249 (40%), Positives = 152/249 (61%), Gaps = 7/249 (2%)
 Frame = -2

Query: 1299 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQD---DVKVYRHVRRSR-LELVVKPKGS 1132
            +   I++V +  EK  PLVGYFP  +DP K       DV ++R  ++ R L++VV P G+
Sbjct: 34   VQATIQVVPDIPEKTPPLVGYFPCSFDPTKSPYSNSTDVGLFRDSKKPRRLQIVVTPNGT 93

Query: 1131 KVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKD---KVP 961
             V+FVGTNY+GEA    SC +ALGV DK TQTLKI+ + SNKIFRL+P   G +   K P
Sbjct: 94   NVDFVGTNYTGEATTGQSCNFALGVLDKATQTLKILPVASNKIFRLQPMVRGYNYSAKEP 153

Query: 960  EETKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKIKKLKV 781
            E +  E LT +E+AE+  +L    GTKKA ++ ++  +L +++  E+QK +  KIK +  
Sbjct: 154  ESSVKEQLTGEEKAEKQMELQSRYGTKKAIRESKKLRSLKQEDGPESQKDLDAKIKLIVP 213

Query: 780  LANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVALE 601
               A    +S+ +R+IP  + +A TP+ AY ++KII  GE ++L     +     +V+ +
Sbjct: 214  NKEALESTESQISRHIPPFNESATTPQEAYSLDKIILTGEWDLLGDIYEHFQGGAEVSWD 273

Query: 600  AFPIFVRNR 574
            AFP FV +R
Sbjct: 274  AFPRFVCHR 282



 Score = 87.0 bits (214), Expect(2) = 9e-61
 Identities = 50/124 (40%), Positives = 71/124 (57%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           D+HS+D  +S++ HRIP +L                  + +S  K +LLIS+VLVL+L V
Sbjct: 313 DQHSMDGISSSRTHRIPNLLFHKFSTMFPTES------KGLSNEKTNLLISYVLVLTLFV 366

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           D+F ++ TDIA+DLRM+ + LR HY               +  ATLPVPL FP + QRR+
Sbjct: 367 DEFETDLTDIAKDLRMSAIALRKHY---ENLGCKLVRKRNVMFATLPVPLQFPQLRQRRQ 423

Query: 158 KKGR 147
           K+ R
Sbjct: 424 KRNR 427


>ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603859 [Solanum tuberosum]
          Length = 431

 Score =  184 bits (467), Expect(2) = 2e-60
 Identities = 107/250 (42%), Positives = 151/250 (60%), Gaps = 12/250 (4%)
 Frame = -2

Query: 1287 IEMVKENQEKIAPLVGYFPTGYDPHKKAQDDV-----KVYRHVRRS-RLELVVKPKGSKV 1126
            +E + EN   I+P+VGYFP+GYDP     D V     K+YR+ +R+ RL+LVV P GS+V
Sbjct: 42   METIAENPNNISPIVGYFPSGYDPLTNNNDGVEELSTKLYRNAKRNNRLQLVVSPNGSQV 101

Query: 1125 NFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAG---KDKVPEE 955
            +FVGTNYSGEA +   C Y+LG+ DKETQTLKIV I +NKI RLEP+  G   ++    +
Sbjct: 102  DFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIAANKIIRLEPRVRGLEAQETEDPD 161

Query: 954  TKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKEDEETQKQMGEKIK---KLK 784
            T  + LTA+ER +++ +LT    +KK  +Q R+  +L ++ED   Q++    I      +
Sbjct: 162  TAKQELTAEERNDKMRELTQKYSSKKTIRQARKLDSLRQQEDTGNQEEFDRNIAGAINKE 221

Query: 783  VLANATAGDDSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVAL 604
             L  A A D    ARNIP HD  A  P+ AYP+++IISKGE + L           ++  
Sbjct: 222  ALEVAVATDS---ARNIPPHDLDATIPQLAYPLDRIISKGEWDFLLDIFELTEAGAEMTP 278

Query: 603  EAFPIFVRNR 574
            + +P FV NR
Sbjct: 279  DLYPSFVCNR 288



 Score = 78.6 bits (192), Expect(2) = 2e-60
 Identities = 47/121 (38%), Positives = 66/121 (54%)
 Frame = -3

Query: 518 DKHSVDHQASAKDHRIPEMLLQXXXXXXXXXXXXXXXKREMSGPKNDLLISHVLVLSLMV 339
           DKHS+D  +SAK H+ P +L Q                + +   K  LLI++VLVL+L  
Sbjct: 319 DKHSMDGVSSAKHHKFPGILSQKFTSMFSISDS-----KRLPEEKVTLLINYVLVLTLFA 373

Query: 338 DDFNSNPTDIAQDLRMTTLKLRPHYXXXXXXXXXXXXXGKIAQATLPVPLNFPPMEQRRR 159
           DDF S+P+DIA+DLR+  + LRP Y               +  ATLPVPL FP + ++RR
Sbjct: 374 DDFRSDPSDIAKDLRINAVALRPFY---EYLGCKLVREKNVVLATLPVPLVFPSVRRKRR 430

Query: 158 K 156
           +
Sbjct: 431 R 431