BLASTX nr result
ID: Papaver29_contig00002966
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver29_contig00002966
(1569 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 180 4e-42
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 174 2e-40
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 173 3e-40
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ... 172 1e-39
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group] 171 1e-39
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group] 170 3e-39
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 169 6e-39
ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420... 167 3e-38
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 167 3e-38
gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 166 4e-38
gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 166 5e-38
gb|AAC02669.1| polyprotein [Arabidopsis thaliana] 166 5e-38
ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868... 166 7e-38
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 165 9e-38
emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera] 165 9e-38
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 165 1e-37
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 164 2e-37
gb|KFK44388.1| hypothetical protein AALP_AA1G251100, partial [Ar... 164 2e-37
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 164 2e-37
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr... 163 3e-37
>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 180 bits (456), Expect = 4e-42
Identities = 106/305 (34%), Positives = 159/305 (52%), Gaps = 13/305 (4%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 699
CQIC K+GH+A EC R+ N + S + +
Sbjct: 314 CQICCKIGHVATECWHRFDNQFQPKASHSNQF-------------------SSSAQDPQA 354
Query: 698 PSSFPSTSGEN-WTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHF 522
+ P GE W D+GAT+H+ +DL +L+LH+ + + V VGNG GL + H G+S
Sbjct: 355 LMAAPGLLGETPWFLDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHSSI 414
Query: 521 STGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIR 342
T ++ NVLHVP ++ ++SV + DNN Y EF+PS+ VKD LL+GG+
Sbjct: 415 PTSQGALLLKNVLHVPKIAANLVSVQKLCHDNNAYVEFYPSYFAVKDQKTQAILLKGGLD 474
Query: 341 NGLYDL----NFDSPTFNAF-VSTTSSS------KAWYQRLGHPSFRTLKHILSEVDASI 195
GLY + + +P F + +TSSS + W+ RLGHPS + +L+ + +
Sbjct: 475 KGLYSVPSAYSSHAPQARVFQIFSTSSSTSIDSMRLWHNRLGHPSLAIVNKVLNHYNLPV 534
Query: 194 LAHLSPSLCTECQLAKSHSLPYSSSVNKASYGSLDLIHSDIWCSP-VKSVNGFKYYVSFV 18
+ + LC CQLAKSH LP+ + +KA DL+H+D+W SP SVNG Y++ +
Sbjct: 535 FSLQNKLLCDSCQLAKSHKLPFVRNYSKA-MKPFDLVHADLWGSPSCLSVNGACYFLLLI 593
Query: 17 DTFSR 3
D +SR
Sbjct: 594 DDYSR 598
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 174 bits (441), Expect = 2e-40
Identities = 112/307 (36%), Positives = 163/307 (53%), Gaps = 15/307 (4%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 699
CQ+C K GH + C R+ + Y + DT + + + A+
Sbjct: 321 CQLCGKFGHTVVRCYHRFDINFQGYNP---------NMDTVQTNKPNAKNQVQAMM---- 367
Query: 698 PSSFPST-SGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHF 522
+ PST S E W D+GAT+H+ + L+ Y + V VGNG L I H G + F
Sbjct: 368 --ASPSTISDEAWFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGNGKHLRILHTGTTFF 425
Query: 521 STGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIR 342
+ S F + VLHVPD++ ++SV QF DNN +FEFHP VKD K LLQG +
Sbjct: 426 PSSSKTFQLRQVLHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKDQVTKKILLQGSLE 485
Query: 341 NGLYDLNFDS---PTFNAFVST----------TSSSKAWYQRLGHPSFRTLKHILSEVDA 201
+GLY F + P+ AFVS+ T+++ W+ RLGHP+ LKHIL+ +
Sbjct: 486 HGLY--RFPARFVPSPAAFVSSSYDRSSNLSLTTTTTLWHSRLGHPADNILKHILTSCNI 543
Query: 200 SILAHLSPSLCTECQLAKSHSLPYSSSVNKASYGSLDLIHSDIW-CSPVKSVNGFKYYVS 24
S H + ++C CQ AKSH LP++ V++AS+ L L+H+D+W + S G +Y++
Sbjct: 544 SHQCHKN-NVCCACQFAKSHKLPFNVXVSRASH-PLALLHADLWGPXSIPSTTGARYFIL 601
Query: 23 FVDTFSR 3
FVD FSR
Sbjct: 602 FVDDFSR 608
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 173 bits (439), Expect = 3e-40
Identities = 114/317 (35%), Positives = 170/317 (53%), Gaps = 25/317 (7%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 699
CQ+C K+GH+ +C +R+ + + N+ + S +Y + P N
Sbjct: 310 CQLCGKIGHVVAQCYYRFDHT---FQVPQNLSSRNSSPRAYYS-FSP-------QVNGVI 358
Query: 698 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 519
P+S S +NW PDSGA+ H+ + +L +E+ V VGNG GLSI HIG S F
Sbjct: 359 PTS-EVFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGTGLSIKHIGQSEFL 417
Query: 518 T--GSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGI 345
+ S ++N++LHVP ++K +LSV +F KDN +FEFH VKD L+ G +
Sbjct: 418 SPFSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKDQVTQAVLMVGKV 477
Query: 344 RNGLYDLNFDS------PT-------------FNAFVSTTSSSKA---WYQRLGHPSFRT 231
R+GLY FDS PT F++ V TTS S W++RLGHPS T
Sbjct: 478 RDGLY--AFDSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTFDLWHKRLGHPSAAT 535
Query: 230 LKHILSEVDASILAHLSPSLCTECQLAKSHSLPYSSSVNKASYGSLDLIHSDIW-CSPVK 54
+K++LS+ + + + + + C+ C L K H P+S S + L+LIH D+W + V
Sbjct: 536 IKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLS-HTTYTKPLELIHLDLWGPTLVL 594
Query: 53 SVNGFKYYVSFVDTFSR 3
S +G++YY+ FVD FSR
Sbjct: 595 SNSGYRYYIHFVDAFSR 611
>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2301
Score = 172 bits (435), Expect = 1e-39
Identities = 112/297 (37%), Positives = 151/297 (50%), Gaps = 4/297 (1%)
Frame = -2
Query: 881 VCQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEY 702
VCQIC K GH A+ C R+ D SY E +
Sbjct: 284 VCQICGKSGHEAMRCWHRF----------------DNSYQL---------DEMHNALAAM 318
Query: 701 YPSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHF 522
S + G W PD+GA+ HI N L Y ++ V VGNG L I H G +
Sbjct: 319 RVSDMIDSRGGEWFPDTGASAHITNTPHHLQNAQPYMGSDSVMVGNGEYLPITHTGAASI 378
Query: 521 STGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIR 342
++ S N I+N+VL P ++K +LSV +FT D C F+F +VC+ D K LLQG
Sbjct: 379 ASSSGNLILNDVLVCPQIAKPLLSVSKFTTDYPCGFDFDADNVCIYDKATKKVLLQGRNT 438
Query: 341 NGLYDLNFDSPTFNAFVST---TSSSKAWYQRLGHPSFRTLKHILSEVDASILAHLSPSL 171
GLY + P F+AF ST +S + W+QRLGHP+ L+ L+ + + + S SL
Sbjct: 439 KGLYSIK--EPAFHAFFSTRQVAASDEVWHQRLGHPNPHILQR-LASIKSVFINKRSKSL 495
Query: 170 CTECQLAKSHSLPYSSSVNKASYGSLDLIHSDIW-CSPVKSVNGFKYYVSFVDTFSR 3
C CQ+AKS LP+S+S A+ L+ IH D+W SPV SV FKYYV +D +SR
Sbjct: 496 CVSCQMAKSSRLPFSASQFVAT-RPLERIHCDVWGPSPVVSVQEFKYYVVLIDNYSR 551
>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
Length = 1087
Score = 171 bits (434), Expect = 1e-39
Identities = 103/290 (35%), Positives = 145/290 (50%), Gaps = 3/290 (1%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 699
CQ+C K GH C R+ +S S ++V F + +S + + Y
Sbjct: 260 CQLCGKEGHTVHTCWKRFDRSFS----GNDVIFQQHHQ----------QAKSASAVSSYG 305
Query: 698 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 519
+ NW D+ AT HI +L L Y E V N AG+SI HIG + F
Sbjct: 306 VDT-------NWYLDTAATDHITGELKKLTTKERYHGNEQVHAANSAGMSISHIGRTIFH 358
Query: 518 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIRN 339
T + N +NNVL++P K ++S + DN+ + E HP CVKD LLQG R
Sbjct: 359 TPNRNLALNNVLYIPKAKKNLVSAHRLAYDNHAFVEIHPKFFCVKDQTTKSTLLQGRSRG 418
Query: 338 GLYDLNFDSPT---FNAFVSTTSSSKAWYQRLGHPSFRTLKHILSEVDASILAHLSPSLC 168
GLY + S T A VST+S+ W+ RLGHPSF + +L + + + +C
Sbjct: 419 GLYPIPLKSTTPQGRQALVSTSSAESRWHSRLGHPSFSVVSRVLRKHNIPVSESREERVC 478
Query: 167 TECQLAKSHSLPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYVSFV 18
CQ AKSH LPYS SV+++S L+L+ SD+W +SV FKYY+ +V
Sbjct: 479 DACQQAKSHQLPYSRSVSRSS-APLELVFSDVWGPAPQSVGRFKYYMVWV 527
>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
Length = 1131
Score = 170 bits (431), Expect = 3e-39
Identities = 102/287 (35%), Positives = 143/287 (49%), Gaps = 3/287 (1%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 699
CQ+C K GH C R+ +S S ++V F + +S + + Y
Sbjct: 260 CQLCGKEGHTVHTCWKRFDRSFS----GNDVIFQQHHQ----------QAKSASAVSSYG 305
Query: 698 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 519
+ NW D+ AT HI +L L Y E V N AG+SI HIG + F
Sbjct: 306 VDT-------NWYLDTAATDHITGELKKLTTKERYHGNEQVHAANSAGMSISHIGRTIFH 358
Query: 518 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIRN 339
T + N +NNVL++P K ++S + DN+ + E HP CVKD LLQG R
Sbjct: 359 TPNRNLALNNVLYIPKAKKNLVSAHRLAYDNHAFVEIHPKFFCVKDQTTKSTLLQGRSRG 418
Query: 338 GLYDLNFDSPT---FNAFVSTTSSSKAWYQRLGHPSFRTLKHILSEVDASILAHLSPSLC 168
GLY + S T A VST+S+ W+ RLGHPSF + +L + + + +C
Sbjct: 419 GLYPIPLKSTTPQGRQALVSTSSAESRWHSRLGHPSFSVVSRVLRKHNIPVSESREERVC 478
Query: 167 TECQLAKSHSLPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYV 27
CQ AKSH LPYS SV+++S L+L+ SD+W +SV FKYY+
Sbjct: 479 DACQQAKSHQLPYSRSVSRSS-APLELVFSDVWGPAPQSVGRFKYYL 524
>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
Length = 1172
Score = 169 bits (428), Expect = 6e-39
Identities = 90/225 (40%), Positives = 133/225 (59%), Gaps = 4/225 (1%)
Frame = -2
Query: 665 WTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFSTGSSNFIMNNV 486
W DSGA++HI +DL +L++H+ Y ++ + + +G GL I H G+ T ++ F + NV
Sbjct: 233 WLLDSGASHHITSDLSNLSIHAPYNGSDDIMIDDGTGLPITHTGSLSLHTSNAQFSLTNV 292
Query: 485 LHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIRNGLYDLNFDSPT 306
L VP M K ++S+ + NN F PS VKDL LL+G ++G+Y+ SP
Sbjct: 293 LCVPGMKKNLISISKLXISNNVSITFLPSSFLVKDLRTGATLLKGKTKDGVYEWLVSSPL 352
Query: 305 FNAFVSTTSSSKAWYQRLGHPSFRTLKHILS----EVDASILAHLSPSLCTECQLAKSHS 138
AF S +SS W+ RLGHP+F LKH++S + +S L H S C C KSH
Sbjct: 353 L-AFSSVKTSSSEWHHRLGHPAFPILKHVISTNNLALSSSSLLHFS---CNTCHCNKSHK 408
Query: 137 LPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSR 3
L +S+S +S L +++SD+W SP+ S +GFKYYV FVD F++
Sbjct: 409 LSFSNSTINSS-RPLQILYSDVWTSPIISYDGFKYYVIFVDYFTK 452
>ref|XP_008356535.1| PREDICTED: uncharacterized protein LOC103420252 [Malus domestica]
Length = 1312
Score = 167 bits (422), Expect = 3e-38
Identities = 105/304 (34%), Positives = 156/304 (51%), Gaps = 12/304 (3%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 699
CQIC H AL+C R + S + P + + +
Sbjct: 334 CQICGSTSHEALDCFDRMNPEISG-------------------KFSPAKLAAMCAH---- 370
Query: 698 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 519
+ + S +W DSGAT HI ND+ ++ + Y + V +G+G GLSI HIG S
Sbjct: 371 ---YTAKSSNSWLIDSGATSHITNDISNIQSPTPYHGEDKVYIGDGKGLSIDHIGTSILH 427
Query: 518 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIRN 339
T + +F ++NVLHVP M +LS QF KDN+C + VKD + LL+G +++
Sbjct: 428 TPAHSFKLHNVLHVPQMQHSLLSAYQFIKDNBCSLTLDINGSSVKDRFTGRTLLRGQVKD 487
Query: 338 GLYDLN--------FDSPTFNAFVSTTSSSKAWYQRLGHPSFRTLKHILSEVDASILAHL 183
G + L+ SPT A VST ++ + W+ RLGHPS + +LS ++ H
Sbjct: 488 GFFPLHGSPALSTVSHSPT--ALVSTAANVRIWHSRLGHPSSAIFRKVLS--TNKVVVHG 543
Query: 182 SPSL---CTECQLAKSHSLPYSSSVNKASYGSLDLIHSDIW-CSPVKSVNGFKYYVSFVD 15
+ SL C +C LAK+H LP+ S S SL+L+H D+W SPV SV+G++YY+ VD
Sbjct: 544 TSSLAFFCKDCALAKNHKLPFGSP-QSVSTASLELLHCDVWGPSPVVSVSGYRYYLLIVD 602
Query: 14 TFSR 3
+S+
Sbjct: 603 DYSK 606
>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
Length = 1334
Score = 167 bits (422), Expect = 3e-38
Identities = 105/296 (35%), Positives = 159/296 (53%), Gaps = 4/296 (1%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 699
CQ+C K GH A++C YH+ +Y + V + A ++
Sbjct: 297 CQLCGKFGHTAIKC---YHRFDINYQGNNGVPL------------------AQAPFSHAM 335
Query: 698 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 519
++ P ++W D+GAT+H+ + +L+ Y + V +G+G L I + G F
Sbjct: 336 XAAAPDHQ-DSWFFDTGATHHLSHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSFF 394
Query: 518 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIRN 339
S F +N VLHVP +S ++SV +F DN +FEFH S VKD K LL+G +R+
Sbjct: 395 FPSKTFSLNQVLHVPHLSTNLISVSKFCTDNAVFFEFHSSCFFVKDQVTKKILLKGWLRD 454
Query: 338 GLYDLNFDSPTFNAFVSTTSSSKA--WYQRLGHPSFRTLKHILSEVDASILAHLSP-SLC 168
GLY+ + SP AFV+T S S W+ RLGHP+ L L+ + S+ ++ + C
Sbjct: 455 GLYEFSSSSPP-RAFVTTGSFSDGAIWHSRLGHPAVPILSKALASCNPSVTLQINKIAPC 513
Query: 167 TECQLAKSHSLPYSSSVNKASYGSLDLIHSDIW-CSPVKSVNGFKYYVSFVDTFSR 3
C LAKSHSLPYS S + AS+ L LIH+D+W +P S+ G +Y++ F+D +SR
Sbjct: 514 IICPLAKSHSLPYSLSSSHASH-PLALIHTDLWGPAPSTSITGARYFLIFIDDYSR 568
>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 166 bits (421), Expect = 4e-38
Identities = 103/296 (34%), Positives = 158/296 (53%), Gaps = 4/296 (1%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 699
CQIC GH A C + + A Y S + Y P + + V
Sbjct: 280 CQICSVHGHSARRCP-QLQQHAGSYA----------SNQSSSSSYAPWQPRANMV----- 323
Query: 698 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 519
S+ P SG NW DSGAT+H+ +DL +L LH Y E V + +G+GL I H G++
Sbjct: 324 -SATPYNSG-NWLLDSGATHHLTSDLNNLALHQPYNGGEEVTIADGSGLPISHSGSALLP 381
Query: 518 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIRN 339
T + + + +VL+VPD+ K ++SV + N EF P+H VKDL LLQG +N
Sbjct: 382 TPTRSLDLKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPAHFQVKDLSTGARLLQGKTKN 441
Query: 338 GLYDLNFDSP-TFNAFVSTTSSS--KAWYQRLGHPSFRTLKHILSEVDASILAHL-SPSL 171
LY+ +S + F S T + +W+ RLGHPS LK ++S+ I L + L
Sbjct: 442 ELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKTLISKFSLPISHSLQNQLL 501
Query: 170 CTECQLAKSHSLPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSR 3
C++C + KSH LP+ S+ +S+ L+ +++D+W SP+ S++ +KYY+ VD ++R
Sbjct: 502 CSDCSINKSHKLPFYSNTIASSH-PLEYLYTDVWTSPITSIDNYKYYLVIVDHYTR 556
>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 166 bits (420), Expect = 5e-38
Identities = 106/301 (35%), Positives = 158/301 (52%), Gaps = 9/301 (2%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 699
CQIC GH A C Q H GSY + S A Y +
Sbjct: 280 CQICSVHGHSARRC---------PQLQQHA-----GSYAS--------NQSSSASYAPWQ 317
Query: 698 P-----SSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIG 534
P S+ P SG NW DSGAT+H+ +DL +L LH Y E V + +G+GL I H G
Sbjct: 318 PRANMVSATPYNSG-NWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLPISHSG 376
Query: 533 NSHFSTGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQ 354
++ T + + + +VL+VPD+ K ++SV + N EF P+H VKDL LLQ
Sbjct: 377 SALLPTPTRSLALKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPAHFQVKDLSTGARLLQ 436
Query: 353 GGIRNGLYDLNFDSP-TFNAFVSTTSSS--KAWYQRLGHPSFRTLKHILSEVDASILAHL 183
G +N LY+ +S + F S T + +W+ RLGHPS LK ++S+ I L
Sbjct: 437 GKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKALISKFSLPISHSL 496
Query: 182 -SPSLCTECQLAKSHSLPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYVSFVDTFS 6
+ LC++C + KSH LP+ S+ +S+ L+ +++D+W SP+ S++ +KYY+ VD ++
Sbjct: 497 QNQLLCSDCSINKSHKLPFYSNTIASSH-PLEYLYTDVWTSPITSIDNYKYYLVIVDHYT 555
Query: 5 R 3
R
Sbjct: 556 R 556
>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 166 bits (420), Expect = 5e-38
Identities = 106/301 (35%), Positives = 158/301 (52%), Gaps = 9/301 (2%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 699
CQIC GH A C Q H GSY + S A Y +
Sbjct: 280 CQICSVHGHSARRC---------PQLQQHA-----GSYAS--------NQSSSASYAPWQ 317
Query: 698 P-----SSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIG 534
P S+ P SG NW DSGAT+H+ +DL +L LH Y E V + +G+GL I H G
Sbjct: 318 PRANMVSATPYNSG-NWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLPISHSG 376
Query: 533 NSHFSTGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQ 354
++ T + + + +VL+VPD+ K ++SV + N EF P+H VKDL LLQ
Sbjct: 377 SALLPTPTRSLALKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPAHFQVKDLSTGARLLQ 436
Query: 353 GGIRNGLYDLNFDSP-TFNAFVSTTSSS--KAWYQRLGHPSFRTLKHILSEVDASILAHL 183
G +N LY+ +S + F S T + +W+ RLGHPS LK ++S+ I L
Sbjct: 437 GKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKALISKFSLPISHSL 496
Query: 182 -SPSLCTECQLAKSHSLPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYVSFVDTFS 6
+ LC++C + KSH LP+ S+ +S+ L+ +++D+W SP+ S++ +KYY+ VD ++
Sbjct: 497 QNQLLCSDCSINKSHKLPFYSNTIASSH-PLEYLYTDVWTSPITSIDNYKYYLVIVDHYT 555
Query: 5 R 3
R
Sbjct: 556 R 556
>ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868780 [Brassica rapa]
Length = 2690
Score = 166 bits (419), Expect = 7e-38
Identities = 102/295 (34%), Positives = 151/295 (51%), Gaps = 3/295 (1%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 699
CQ+C GH A C +Q + G +++ W + A ++Y
Sbjct: 967 CQLCGIFGHSAQRC-----------SQLQSFGSSSGQFNS--PASWN-PRANLATSSQYN 1012
Query: 698 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 519
P+ NW DSGAT+H+ DL +L LH Y E V + +G GLSI HIG++
Sbjct: 1013 PN--------NWILDSGATHHLTTDLNNLALHQPYNGGEEVTIADGTGLSISHIGSAILP 1064
Query: 518 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIRN 339
T S +F + +VL+VP++ K ++SV + N EF P+H VKDL LLQG +N
Sbjct: 1065 TPSHSFPLRDVLYVPNLHKNLVSVYRLCNANQVSVEFFPAHFQVKDLSTGARLLQGKTKN 1124
Query: 338 GLYDLNFDS---PTFNAFVSTTSSSKAWYQRLGHPSFRTLKHILSEVDASILAHLSPSLC 168
LY+ T+ A S +S +W+ RLGHPS LK ++S+ I + C
Sbjct: 1125 ELYEWPLPPTKITTYLASPSPKTSLASWHSRLGHPSLPILKTLVSQFSLPISDSIKQFSC 1184
Query: 167 TECQLAKSHSLPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSR 3
+C KSH LP+ ++ K S L ++SD+W SP+ S + +KYY+ FVD F+R
Sbjct: 1185 VDCLTNKSHKLPFHTNTIK-SDKPLQYLYSDVWTSPIVSSDHYKYYLIFVDHFTR 1238
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 165 bits (418), Expect = 9e-38
Identities = 103/294 (35%), Positives = 146/294 (49%), Gaps = 1/294 (0%)
Frame = -2
Query: 881 VCQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEY 702
VCQ+C K GH+A +C RY D Y P E A Y
Sbjct: 280 VCQVCHKRGHVASDCWHRYD-----------------------DSYVPDEKLGGAATYAY 316
Query: 701 YPSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHF 522
+ NW D+GAT HI L L Y+ + + +G G+SI H+G++
Sbjct: 317 GIDT-------NWYVDTGATDHITGQLDKLTTKERYKGTDQIHTASGEGMSIKHVGHAIV 369
Query: 521 STGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIR 342
T S + NVLHVP+ +K ++SV + DN + E H + +KD + +L+G R
Sbjct: 370 PTPSRPLHLKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCR 429
Query: 341 NGLYDLNFDSPTFNAFVSTTSSSKAWYQRLGHPSFRTLKHILSEVDASILAH-LSPSLCT 165
GLY L S AFV+T S + W+ RLGHPS + ILS+ L++ ++ S+C
Sbjct: 430 RGLYPLPARSSLRQAFVATPSFVR-WHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCD 488
Query: 164 ECQLAKSHSLPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSR 3
CQ AK H LP+ S + S L+LIHSD+W +SV KYYVSF+D +S+
Sbjct: 489 ACQQAKCHQLPFPRSTS-VSNNPLELIHSDVWGPASESVGAKKYYVSFIDDYSK 541
>emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]
Length = 1394
Score = 165 bits (418), Expect = 9e-38
Identities = 111/309 (35%), Positives = 159/309 (51%), Gaps = 7/309 (2%)
Frame = -2
Query: 908 PHLXXXSQIVCQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ET 729
PHL Q CQ+C K GH ++C YH Y + V + D P +
Sbjct: 293 PHLPTRPQ--CQLCGKFGHTVVKC---YHXFDITYQGTNGV--------SSSQDSSPLQA 339
Query: 728 ESYAVYNEYYPSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLS 549
A N Y +W D+GAT+H+ + +L+ Y A+ V +G+G L
Sbjct: 340 MLAATPNHQY----------SWFFDTGATHHLSHSAQTLSHVQPYSGADQVTIGDGHSLP 389
Query: 548 IHHIGNSHFSTGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIH 369
I + GN F S F +N VLHVP +S ++SV +F DN +FEFH +H VKD
Sbjct: 390 ILNTGNKSFFFHSKVFCLNQVLHVPQLSTNLISVSKFCTDNAVFFEFHSTHFFVKDQVTK 449
Query: 368 KELLQGGIRNGLYDLNFDSPTFNAFVSTTS-----SSKAWYQRLGHPSFRTLKHILSEVD 204
+ LL+G +R+GLY+ S T +AFVST+S W+ RLGHP+ L L+ +
Sbjct: 450 QTLLKGWLRDGLYEFPSSSST-HAFVSTSSVPALTPGAIWHSRLGHPAXPILSKALASCN 508
Query: 203 ASILAHLSP-SLCTECQLAKSHSLPYSSSVNKASYGSLDLIHSDIW-CSPVKSVNGFKYY 30
S+ ++ + C C LAKSHSL YS S + AS L LIH+D+W +P S +G Y+
Sbjct: 509 PSVSFQINKIAPCKICPLAKSHSLXYSLSSSHASQ-PLALIHTDLWGXAPSPSTSGAXYF 567
Query: 29 VSFVDTFSR 3
+ F+D +SR
Sbjct: 568 LLFIDDYSR 576
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 165 bits (417), Expect = 1e-37
Identities = 99/296 (33%), Positives = 153/296 (51%), Gaps = 4/296 (1%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKS-ASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEY 702
CQ+C ++GH AL C +R+ ++ D A++ +GS
Sbjct: 282 CQVCSRVGHTALNCWYRFDENYVPDQRSANSAAHQNGS---------------------- 319
Query: 701 YPSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHF 522
W D+GAT HI DL L +H +Y + + NG G++I +IGN+
Sbjct: 320 ---------NVPWYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGTGMTISNIGNAIV 370
Query: 521 STGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIR 342
T S + + +VLHVP K ++SV + T DN+ + EFH SH +KD LL G R
Sbjct: 371 PTSSRSLHLRSVLHVPSTHKNLISVHRLTNDNDVFIEFHSSHFLIKDRQTKAVLLHGKCR 430
Query: 341 NGLYDL--NFDSPTFNAFVSTTSSSKAWYQRLGHPSFRTLKHILSEVDASILAHLS-PSL 171
+GLY L + D + F ST + W++RLGHPS + ++S + L++ S S+
Sbjct: 431 DGLYPLPPHPDLRLKHNFSSTRVPLEHWHKRLGHPSRDIVHRVISNNNLPCLSNNSTTSV 490
Query: 170 CTECQLAKSHSLPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSR 3
C C AK+H LPY+ S++++S L LI SD++ + S +KYYVSF+D +S+
Sbjct: 491 CDACLQAKAHQLPYTISMSQSS-APLMLIFSDVFGPAIDSFGRYKYYVSFIDDYSK 545
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 164 bits (416), Expect = 2e-37
Identities = 103/294 (35%), Positives = 145/294 (49%), Gaps = 1/294 (0%)
Frame = -2
Query: 881 VCQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEY 702
VCQ+C K GH+A +C RY D Y P E A Y
Sbjct: 271 VCQVCHKRGHVASDCWHRYD-----------------------DSYVPDEKLGGAATYAY 307
Query: 701 YPSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHF 522
+ NW D+GAT HI L L Y+ + + +G G SI H+G++
Sbjct: 308 GVDT-------NWYVDTGATDHITGQLDKLTTKERYKGTDQIHTASGEGTSIKHVGHAIV 360
Query: 521 STGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIR 342
T S + NVLHVP+ +K ++SV + DN + E H + +KD + +L+G R
Sbjct: 361 PTPSHPLHLKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCR 420
Query: 341 NGLYDLNFDSPTFNAFVSTTSSSKAWYQRLGHPSFRTLKHILSEVDASILAH-LSPSLCT 165
GLY L S AFV+T S + W+ RLGHPS + ILS+ L++ ++ S+C
Sbjct: 421 RGLYPLPARSSLRQAFVATPSFVR-WHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCD 479
Query: 164 ECQLAKSHSLPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSR 3
CQ AK H LP+ S + S L+LIHSD+W +SV KYYVSF+D +S+
Sbjct: 480 ACQQAKCHQLPFPRSTS-VSNNPLELIHSDVWGPASESVGAKKYYVSFIDDYSK 532
>gb|KFK44388.1| hypothetical protein AALP_AA1G251100, partial [Arabis alpina]
Length = 2090
Score = 164 bits (415), Expect = 2e-37
Identities = 100/296 (33%), Positives = 158/296 (53%), Gaps = 4/296 (1%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 699
CQIC GH A C SA ++ + + + + P + A+ + Y
Sbjct: 285 CQICGIQGHSAKRCSKLQRHSAKRCSKLQSFQSSAQQQQSPFTSWQP--RANLAMNSSY- 341
Query: 698 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 519
S +NW DSGAT+H+ +DL +L+LH Y+ ++ V + +G+ + I G F
Sbjct: 342 -------SADNWLLDSGATHHMTSDLHNLSLHQPYRGSDGVTIADGSTIPITQTGFKSFP 394
Query: 518 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIRN 339
+ S + ++ VL+VPD+ K ++SV + N EF P+ VKDL LLQG N
Sbjct: 395 SNSRDLQLHKVLYVPDLQKNLISVYRLCNTNRVSVEFFPASFQVKDLSTETPLLQGRTIN 454
Query: 338 GLYD--LNFDSPT-FNAFVSTTSSSKAWYQRLGHPSFRTLKHILSEVDASILAHLS-PSL 171
LY+ ++ SPT F A S+T++ ++W+ RLGHPS +I+S I S P
Sbjct: 455 ELYEWPISSSSPTAFAASPSSTTTLQSWHSRLGHPSSLIFNNIVSRFSIPISKQSSQPLS 514
Query: 170 CTECQLAKSHSLPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSR 3
C++C + K+H +P+S S +S L+ I+SD+W SP+ S+ FKYY+ FVD ++R
Sbjct: 515 CSDCFINKTHKIPFSKSTITSS-KPLEYIYSDVWSSPILSLENFKYYLIFVDHYTR 569
Score = 72.4 bits (176), Expect = 1e-09
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Frame = -2
Query: 362 LLQGGIRNGLYD--LNFDSPT-FNAFVSTTSSSKAWYQRLGHPSFRTLKHILSEVDASIL 192
LLQG N LY+ ++ SPT F A S+T++ ++W+ RLGHPS +I+S I
Sbjct: 1507 LLQGRTINELYEWPISSSSPTAFAASPSSTTTLQSWHSRLGHPSSLIFNNIVSRFSIPIS 1566
Query: 191 AHLS-PSLCTECQLAKSHSLPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYVSFVD 15
S P C++C + K+H +P+S S +S L+ I+SD+W S + YY+ FVD
Sbjct: 1567 KQSSQPLSCSDCFINKTHKIPFSKSTITSS-KPLEYIYSDVWSSHI-------YYLIFVD 1618
Query: 14 TFSR 3
++R
Sbjct: 1619 HYTR 1622
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 164 bits (415), Expect = 2e-37
Identities = 105/301 (34%), Positives = 158/301 (52%), Gaps = 9/301 (2%)
Frame = -2
Query: 878 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 699
CQIC GH A C Q H GSY + S A Y +
Sbjct: 280 CQICSVHGHSARRC---------PQLQQHA-----GSYAS--------NQSSSASYAPWQ 317
Query: 698 P-----SSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIG 534
P S+ P SG NW DSGAT+H+ ++L +L LH Y E V + +G+GL I H G
Sbjct: 318 PRANMVSATPYNSG-NWLLDSGATHHLTSNLNNLALHQPYNGDEEVTIADGSGLPISHSG 376
Query: 533 NSHFSTGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQ 354
++ T + + + +VL+VPD+ K ++SV + N EF P+H VKDL LLQ
Sbjct: 377 SALLPTPTRSLALKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPAHFQVKDLSTGARLLQ 436
Query: 353 GGIRNGLYDLNFDSP-TFNAFVSTTSSS--KAWYQRLGHPSFRTLKHILSEVDASILAHL 183
G +N LY+ +S + F S T + +W+ RLGHPS LK ++S+ I L
Sbjct: 437 GKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKALISKFSLPISHSL 496
Query: 182 -SPSLCTECQLAKSHSLPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYVSFVDTFS 6
+ LC++C + KSH LP+ S+ +S+ L+ +++D+W SP+ S++ +KYY+ VD ++
Sbjct: 497 QNQLLCSDCSINKSHKLPFYSNTIASSH-PLEYLYTDVWTSPITSIDNYKYYLVIVDHYT 555
Query: 5 R 3
R
Sbjct: 556 R 556
>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
polyprotein from Arabidopsis arenosa [Arabidopsis
thaliana]
Length = 1194
Score = 163 bits (413), Expect = 3e-37
Identities = 85/229 (37%), Positives = 136/229 (59%), Gaps = 4/229 (1%)
Frame = -2
Query: 677 SGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFSTGSSNFI 498
+ NW DSGAT+HI +DL +L+LH Y E V + +G+GLSI H G++ ST S +
Sbjct: 284 NANNWLLDSGATHHITSDLNNLSLHQPYTGGEDVTIADGSGLSISHTGSALISTPSRSLA 343
Query: 497 MNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGIRNGLYDLNF 318
+ +VL+VP++ K ++SV + N EF P+H VKDL +LLQG ++ LY+
Sbjct: 344 LTDVLYVPNIHKNLISVYRMCNANKVSVEFFPAHFQVKDLKTGVQLLQGRTKDELYEWPV 403
Query: 317 DSPTFNAFVSTTSSS---KAWYQRLGHPSFRTLKHILSEVDASILAHLSPSL-CTECQLA 150
+ P ++ +TT+ +W+ RLGHPS TLK ++S+ + L C++C L
Sbjct: 404 NPPKPSSHFTTTTPKTDLTSWHSRLGHPSLSTLKVVVSQFSLPVSNSLQKQFNCSDCLLN 463
Query: 149 KSHSLPYSSSVNKASYGSLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSR 3
K+H LP+ ++ S L+ ++ D+W SP+ S++ FKYY+ VD ++R
Sbjct: 464 KTHKLPFHTN-TITSTQPLEYLYIDLWTSPIVSIDNFKYYLVIVDHYTR 511