BLASTX nr result

ID: Papaver29_contig00002548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver29_contig00002548
         (1036 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002987288.1| hypothetical protein SELMODRAFT_269256 [Sela...    45   4e-06

>ref|XP_002987288.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
           gi|302815025|ref|XP_002989195.1| hypothetical protein
           SELMODRAFT_269487 [Selaginella moellendorffii]
           gi|300143095|gb|EFJ09789.1| hypothetical protein
           SELMODRAFT_269487 [Selaginella moellendorffii]
           gi|300144923|gb|EFJ11603.1| hypothetical protein
           SELMODRAFT_269256 [Selaginella moellendorffii]
          Length = 567

 Score = 45.4 bits (106), Expect(2) = 4e-06
 Identities = 23/60 (38%), Positives = 34/60 (56%)
 Frame = -2

Query: 504 DIATLCGTIGPVSRVIGPELYEGPEHLRLLVTFENKEDAVKAIDTLNGSLFKGRVLTVER 325
           D+  L G  GP+S  +  +  +G       V FEN EDAVKA++ L+G+ F+ + L V R
Sbjct: 207 DLQKLFGVFGPISSAVVMKEVDGKSKCFGFVNFENPEDAVKAVEDLHGTTFQDKELYVSR 266



 Score = 33.9 bits (76), Expect(2) = 4e-06
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = -1

Query: 781 KNLPAGILNSNLKRLCLDYGPVVRVEIMRNVGQVS-------FENREGAQMAIDKLNGST 623
           KNL   I N  L  L   YG ++  +I  +V  VS       F+  + A  AI+K+NG+T
Sbjct: 108 KNLDKSIDNKALHDLFSPYGKILSCKIALDVSNVSKGHGFVQFDTEDAAHTAIEKINGTT 167


Top