BLASTX nr result

ID: Papaver27_contig00056645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00056645
         (398 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    57   3e-06
ref|XP_004292857.1| PREDICTED: F-box protein At5g07610-like [Fra...    56   5e-06
ref|XP_004305299.1| PREDICTED: F-box protein At5g07610-like [Fra...    55   8e-06

>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/68 (42%), Positives = 38/68 (55%)
 Frame = +2

Query: 104 IDSNSSASFIGSNVDILTVILTRLPXXXXXXXXXXXXQWLSMINDPQFVHKHFIQNPRFS 283
           +DS+ SA  IGSN D++T IL RLP            QWLS+I+ P F   H ++NP  +
Sbjct: 1   MDSSLSAEIIGSNEDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPNHT 60

Query: 284 IPGLFYGN 307
           I  LF  N
Sbjct: 61  ISALFLRN 68


>ref|XP_004292857.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
           vesca]
          Length = 412

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = +2

Query: 131 IGSNVDILTVILTRLPXXXXXXXXXXXXQWLSMINDPQFVHKHFIQNPRFSIPGLFYGND 310
           +GS  DILT IL R+P             WLS+I+DP+F H+H +QNPR S+  +F    
Sbjct: 4   VGSIEDILTEILVRVPARPLVRFKCVSKHWLSLISDPKFCHRHTLQNPRSSMSAVFSDQS 63

Query: 311 SN-SDFDRKPIYDYIILDGNTNS 376
           S+ + F   P+ D   LD +T S
Sbjct: 64  SSCTAFSFIPLDD---LDHDTRS 83


>ref|XP_004305299.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
           vesca]
          Length = 385

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/90 (34%), Positives = 47/90 (52%)
 Frame = +2

Query: 110 SNSSASFIGSNVDILTVILTRLPXXXXXXXXXXXXQWLSMINDPQFVHKHFIQNPRFSIP 289
           S+ SA  +GS  ++LT IL R+P            QWLS+I+DP F  +H  QNP   I 
Sbjct: 5   SSCSAEIVGSIDELLTQILERVPALSLIRSKCVSKQWLSLISDPDFHRRHTFQNPNPKIL 64

Query: 290 GLFYGNDSNSDFDRKPIYDYIILDGNTNSY 379
             F   ++N D   +P+Y   +++  TN +
Sbjct: 65  A-FLSPETNQDQKHRPVY---VVNPTTNQF 90


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