BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00055579
         (490 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55442.1| RNA polymerase I largest subunit [Pinus nigra]         223   5e-57
gb|ACJ63315.1| RNA polymerase I large subunit [Liriodendron tuli...   219   6e-56
gb|ACJ63313.1| RNA polymerase I large subunit [Drimys winteri]        219   6e-56
gb|ACJ63312.1| RNA polymerase I large subunit [Ceratophyllum dem...   218   1e-55
gb|AAS55444.1| RNA polymerase I largest subunit [Zamia muricata]      217   3e-55
gb|AAS55443.1| RNA polymerase I largest subunit [Cycas revoluta]      214   2e-54
gb|AAS55437.1| RNA polymerase I largest subunit [Taxus canadensis]    213   2e-54
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   213   3e-54
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              213   3e-54
ref|XP_006850181.1| hypothetical protein AMTR_s00022p00245030 [A...   214   3e-54
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]   213   3e-54
dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryz...   213   4e-54
gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indi...   213   4e-54
gb|EEE66008.1| hypothetical protein OsJ_21959 [Oryza sativa Japo...   213   4e-54
gb|AAS55439.1| RNA polymerase I largest subunit [Ephedra viridis]     212   5e-54
gb|ACJ63316.1| RNA polymerase I large subunit [Nymphaea odorata]      212   9e-54
gb|ACJ63314.1| RNA polymerase I large subunit [Illicium parviflo...   213   9e-54
gb|AAS55436.1| RNA polymerase I largest subunit [Podocarpus macr...   211   1e-53
gb|AAS55438.1| RNA polymerase I largest subunit [Welwitschia mir...   211   1e-53
gb|AAS55445.1| RNA polymerase I largest subunit [Ginkgo biloba]       209   6e-53

>gb|AAS55442.1| RNA polymerase I largest subunit [Pinus nigra]
          Length = 547

 Score =  223 bits (567), Expect(2) = 5e-57
 Identities = 105/135 (77%), Positives = 120/135 (88%)
 Frame = +2

Query: 56  MVLQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMTI 235
           M ++EEIEK +RT GE A++RLDR+MSS+LNRITSEVN+ LFP GL KPFP NCLS+MT+
Sbjct: 244 MCIEEEIEKVLRTKGEVASSRLDRLMSSALNRITSEVNNSLFPKGLLKPFPGNCLSLMTM 303

Query: 236 SGAKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTGL 415
           +GAKG  VNF+QISSLLGQQELEGKRVPRM+SGKTLP F PWD  SR+GGFI DRFLTGL
Sbjct: 304 TGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDSRSRAGGFISDRFLTGL 363

Query: 416 RPQEYYFHCMAGREG 460
           RPQEYYFHCMAGR+G
Sbjct: 364 RPQEYYFHCMAGRDG 378



 Score = 24.3 bits (51), Expect(2) = 5e-57
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  A+KTSRSGYL
Sbjct: 379 LVDTAIKTSRSGYL 392


>gb|ACJ63315.1| RNA polymerase I large subunit [Liriodendron tulipifera]
          Length = 558

 Score =  219 bits (558), Expect(2) = 6e-56
 Identities = 104/154 (67%), Positives = 125/154 (81%), Gaps = 5/154 (3%)
 Frame = +2

Query: 14  KNFVVNTHASFV-----HPMVLQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDML 178
           +N   N H+  +      PM LQ EIE+ IR++GE+A T LD +MS  LN +T+E+ND +
Sbjct: 253 ENIGTNVHSKLIGAKITEPMKLQMEIERAIRSHGESAVTYLDMLMSHELNGVTTEINDAI 312

Query: 179 FPNGLQKPFPKNCLSVMTISGAKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHP 358
            P+GL KPFP+NCLS+MT +GAKGS VNF+QISSLLGQQ+LEGKRVPRM+SGKTLP F P
Sbjct: 313 IPSGLLKPFPRNCLSLMTTTGAKGSQVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPP 372

Query: 359 WDPASRSGGFIGDRFLTGLRPQEYYFHCMAGREG 460
           WD A+R+GGFIGDRFLTGLRPQEYYFHCMAGREG
Sbjct: 373 WDTAARAGGFIGDRFLTGLRPQEYYFHCMAGREG 406



 Score = 24.3 bits (51), Expect(2) = 6e-56
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  A+KTSRSGYL
Sbjct: 407 LVDTAIKTSRSGYL 420


>gb|ACJ63313.1| RNA polymerase I large subunit [Drimys winteri]
          Length = 539

 Score =  219 bits (558), Expect(2) = 6e-56
 Identities = 103/138 (74%), Positives = 120/138 (86%)
 Frame = +2

Query: 47  VHPMVLQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSV 226
           + P  LQ EIE+ +R+NG++A   LDR+MSS+LNR+TSEVN+ LFP GL KPFP+NCLS+
Sbjct: 246 IDPKTLQMEIERVLRSNGDSAIASLDRLMSSALNRLTSEVNNRLFPRGLFKPFPRNCLSL 305

Query: 227 MTISGAKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFL 406
           MT +GAKG  VNF+QISSLLGQQELEGKRVPRM+SGKTLP F PWD ASR+GGFI DRFL
Sbjct: 306 MTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDCASRAGGFISDRFL 365

Query: 407 TGLRPQEYYFHCMAGREG 460
           +GLRPQEYYFHCMAGREG
Sbjct: 366 SGLRPQEYYFHCMAGREG 383



 Score = 24.3 bits (51), Expect(2) = 6e-56
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  A+KTSRSGYL
Sbjct: 384 LVDTAIKTSRSGYL 397


>gb|ACJ63312.1| RNA polymerase I large subunit [Ceratophyllum demersum]
          Length = 538

 Score =  218 bits (554), Expect(2) = 1e-55
 Identities = 104/151 (68%), Positives = 125/151 (82%), Gaps = 7/151 (4%)
 Frame = +2

Query: 29  NTHASFV-------HPMVLQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPN 187
           + HA+F+        P+ LQ E+EK +R +G+ A TRLDRMMS++L  +TS+V + L PN
Sbjct: 233 DAHANFLGTKEGSQDPIKLQMELEKVLRRHGDVAVTRLDRMMSNALGELTSKVTNELLPN 292

Query: 188 GLQKPFPKNCLSVMTISGAKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDP 367
           GL KPFPKNCLS+MT +GAKGS VNF+QISSLLGQQELEGKRVPRM+SGKTLP F PWD 
Sbjct: 293 GLSKPFPKNCLSLMTTTGAKGSMVNFNQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDS 352

Query: 368 ASRSGGFIGDRFLTGLRPQEYYFHCMAGREG 460
           +SR+GG+IGDR+LTGLRPQEYYFHCMAGREG
Sbjct: 353 SSRAGGYIGDRYLTGLRPQEYYFHCMAGREG 383



 Score = 24.6 bits (52), Expect(2) = 1e-55
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  AVKTSRSGYL
Sbjct: 384 LVDTAVKTSRSGYL 397


>gb|AAS55444.1| RNA polymerase I largest subunit [Zamia muricata]
          Length = 551

 Score =  217 bits (552), Expect(2) = 3e-55
 Identities = 100/133 (75%), Positives = 120/133 (90%)
 Frame = +2

Query: 62  LQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMTISG 241
           ++E+IEK +R+ GE A++RLDR+MSS+LNR+TS+VN+ LFP GL KPFP NCLS+MT++G
Sbjct: 253 MEEDIEKHLRSKGEVASSRLDRLMSSALNRLTSDVNNGLFPKGLLKPFPSNCLSLMTMTG 312

Query: 242 AKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTGLRP 421
           AKG  VNF+QISSLLGQQELEGKRVPRM+SGKTLP F PWD  +R+GGFIGDRFLTGLRP
Sbjct: 313 AKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDSRARAGGFIGDRFLTGLRP 372

Query: 422 QEYYFHCMAGREG 460
           QEYYFHCMAGR+G
Sbjct: 373 QEYYFHCMAGRDG 385



 Score = 24.3 bits (51), Expect(2) = 3e-55
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  A+KTSRSGYL
Sbjct: 386 LVDTAIKTSRSGYL 399


>gb|AAS55443.1| RNA polymerase I largest subunit [Cycas revoluta]
          Length = 547

 Score =  214 bits (545), Expect(2) = 2e-54
 Identities = 99/133 (74%), Positives = 117/133 (87%)
 Frame = +2

Query: 62  LQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMTISG 241
           ++ +IEK +R  GE A+ RLDR+MSS+LNR+TSEVN++LFP GL KPFP NCLS+MT++G
Sbjct: 253 MEGDIEKHLRGKGEVASNRLDRLMSSALNRVTSEVNNVLFPKGLLKPFPSNCLSLMTVTG 312

Query: 242 AKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTGLRP 421
           AKG  VNF+QISSLLGQQELEGKRVPRM+SGKTLP F PWD  +R+GGFI DRFLTGLRP
Sbjct: 313 AKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDSRARAGGFISDRFLTGLRP 372

Query: 422 QEYYFHCMAGREG 460
           QEYYFHCMAGR+G
Sbjct: 373 QEYYFHCMAGRDG 385



 Score = 24.3 bits (51), Expect(2) = 2e-54
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  A+KTSRSGYL
Sbjct: 386 LVDTAIKTSRSGYL 399


>gb|AAS55437.1| RNA polymerase I largest subunit [Taxus canadensis]
          Length = 545

 Score =  213 bits (543), Expect(2) = 2e-54
 Identities = 100/131 (76%), Positives = 116/131 (88%)
 Frame = +2

Query: 68  EEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMTISGAK 247
           E+IEK +R+ GETA+ RLDR+MSS+LNRITS+VN+ LFP GL KPFP NCLS+MT +GAK
Sbjct: 251 EDIEKLLRSKGETASARLDRLMSSALNRITSDVNNSLFPKGLLKPFPSNCLSLMTTTGAK 310

Query: 248 GSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTGLRPQE 427
           G  V+F+QISSLLGQQELEGKRVPRM+SGKTLP F PWD  +R+GGFI DRFLTGLRPQE
Sbjct: 311 GGLVDFTQISSLLGQQELEGKRVPRMVSGKTLPCFLPWDTRARAGGFISDRFLTGLRPQE 370

Query: 428 YYFHCMAGREG 460
           YYFHCMAGR+G
Sbjct: 371 YYFHCMAGRDG 381



 Score = 24.6 bits (52), Expect(2) = 2e-54
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  AVKTSRSGYL
Sbjct: 382 LVDTAVKTSRSGYL 395


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  213 bits (542), Expect(2) = 3e-54
 Identities = 104/147 (70%), Positives = 119/147 (80%)
 Frame = +2

Query: 20   FVVNTHASFVHPMVLQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQK 199
            F+ + H   + P+ LQ E+EK I +NGE A TRLDRMM + LN +TS+VN  L   GL K
Sbjct: 938  FIGSNHGK-IDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVK 996

Query: 200  PFPKNCLSVMTISGAKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRS 379
            PFPKNCLS+MT +GAKGSTVNFSQISS LGQQ+LEGKRVPRM+SGKTLP F PWD A+R+
Sbjct: 997  PFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARA 1056

Query: 380  GGFIGDRFLTGLRPQEYYFHCMAGREG 460
            GGFI DRFLTGL PQEYYFHCMAGREG
Sbjct: 1057 GGFISDRFLTGLHPQEYYFHCMAGREG 1083



 Score = 24.6 bits (52), Expect(2) = 3e-54
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 447  LVVKAVKTSRSGYL 488
            LV  AVKTSRSGYL
Sbjct: 1084 LVDTAVKTSRSGYL 1097


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  213 bits (542), Expect(2) = 3e-54
 Identities = 104/147 (70%), Positives = 119/147 (80%)
 Frame = +2

Query: 20   FVVNTHASFVHPMVLQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQK 199
            F+ + H   + P+ LQ E+EK I +NGE A TRLDRMM + LN +TS+VN  L   GL K
Sbjct: 867  FIGSNHGK-IDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVK 925

Query: 200  PFPKNCLSVMTISGAKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRS 379
            PFPKNCLS+MT +GAKGSTVNFSQISS LGQQ+LEGKRVPRM+SGKTLP F PWD A+R+
Sbjct: 926  PFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARA 985

Query: 380  GGFIGDRFLTGLRPQEYYFHCMAGREG 460
            GGFI DRFLTGL PQEYYFHCMAGREG
Sbjct: 986  GGFISDRFLTGLHPQEYYFHCMAGREG 1012



 Score = 24.6 bits (52), Expect(2) = 3e-54
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 447  LVVKAVKTSRSGYL 488
            LV  AVKTSRSGYL
Sbjct: 1013 LVDTAVKTSRSGYL 1026


>ref|XP_006850181.1| hypothetical protein AMTR_s00022p00245030 [Amborella trichopoda]
            gi|548853779|gb|ERN11762.1| hypothetical protein
            AMTR_s00022p00245030 [Amborella trichopoda]
          Length = 1600

 Score =  214 bits (546), Expect(2) = 3e-54
 Identities = 103/136 (75%), Positives = 115/136 (84%)
 Frame = +2

Query: 53   PMVLQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMT 232
            P+ +Q  IEK +R  GE+A  RLDRMMSS+LNR+TSEVN+ LFP GL K FP NCLS+MT
Sbjct: 790  PIRMQAAIEKLVRGKGESAIARLDRMMSSALNRLTSEVNNSLFPEGLSKSFPSNCLSLMT 849

Query: 233  ISGAKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTG 412
             SGAKG  VNF+QISSLLGQQELEGKRVPRM+SGKTLP F PWD A+R+GGFI DRFL G
Sbjct: 850  SSGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFLPWDSAARAGGFISDRFLNG 909

Query: 413  LRPQEYYFHCMAGREG 460
            LRPQEYYFHCMAGREG
Sbjct: 910  LRPQEYYFHCMAGREG 925



 Score = 23.1 bits (48), Expect(2) = 3e-54
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  A+KT+RSGYL
Sbjct: 926 LVDTAIKTARSGYL 939


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score =  213 bits (542), Expect(2) = 3e-54
 Identities = 104/147 (70%), Positives = 119/147 (80%)
 Frame = +2

Query: 20   FVVNTHASFVHPMVLQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQK 199
            F+ + H   + P+ LQ E+EK I +NGE A TRLDRMM + LN +TS+VN  L   GL K
Sbjct: 1004 FIGSNHGK-IDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVK 1062

Query: 200  PFPKNCLSVMTISGAKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRS 379
            PFPKNCLS+MT +GAKGSTVNFSQISS LGQQ+LEGKRVPRM+SGKTLP F PWD A+R+
Sbjct: 1063 PFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARA 1122

Query: 380  GGFIGDRFLTGLRPQEYYFHCMAGREG 460
            GGFI DRFLTGL PQEYYFHCMAGREG
Sbjct: 1123 GGFISDRFLTGLHPQEYYFHCMAGREG 1149



 Score = 24.6 bits (52), Expect(2) = 3e-54
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 447  LVVKAVKTSRSGYL 488
            LV  AVKTSRSGYL
Sbjct: 1150 LVDTAVKTSRSGYL 1163


>dbj|BAD35511.1| putative RNA polymerase A(I) large subunit [Oryza sativa Japonica
            Group]
          Length = 1748

 Score =  213 bits (541), Expect(2) = 4e-54
 Identities = 104/135 (77%), Positives = 115/135 (85%)
 Frame = +2

Query: 56   MVLQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMTI 235
            M LQ E+EK IR NGE+AT  LDR MSS LN +TS+VN  +FP GL+KPFP NCLS+MT 
Sbjct: 929  MKLQMEVEKIIRRNGESATVILDRNMSSELNTLTSKVNKKVFPYGLRKPFPGNCLSLMTQ 988

Query: 236  SGAKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTGL 415
            +GAKG  VN +QISSLLGQQELEGKRVPRMISGKTLP F PWD +SR+GGFIGDRFLTGL
Sbjct: 989  TGAKGGLVNMTQISSLLGQQELEGKRVPRMISGKTLPCFPPWDTSSRAGGFIGDRFLTGL 1048

Query: 416  RPQEYYFHCMAGREG 460
            RPQEYYFHCMAGREG
Sbjct: 1049 RPQEYYFHCMAGREG 1063



 Score = 24.6 bits (52), Expect(2) = 4e-54
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 447  LVVKAVKTSRSGYL 488
            LV  AVKTSRSGYL
Sbjct: 1064 LVDTAVKTSRSGYL 1077


>gb|EEC80966.1| hypothetical protein OsI_23688 [Oryza sativa Indica Group]
          Length = 1350

 Score =  213 bits (541), Expect(2) = 4e-54
 Identities = 104/135 (77%), Positives = 115/135 (85%)
 Frame = +2

Query: 56   MVLQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMTI 235
            M LQ E+EK IR NGE+AT  LDR MSS LN +TS+VN  +FP GL+KPFP NCLS+MT 
Sbjct: 998  MKLQMEVEKIIRRNGESATVILDRNMSSELNTLTSKVNKKVFPYGLRKPFPGNCLSLMTQ 1057

Query: 236  SGAKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTGL 415
            +GAKG  VN +QISSLLGQQELEGKRVPRMISGKTLP F PWD +SR+GGFIGDRFLTGL
Sbjct: 1058 TGAKGGLVNMTQISSLLGQQELEGKRVPRMISGKTLPCFPPWDTSSRAGGFIGDRFLTGL 1117

Query: 416  RPQEYYFHCMAGREG 460
            RPQEYYFHCMAGREG
Sbjct: 1118 RPQEYYFHCMAGREG 1132



 Score = 24.6 bits (52), Expect(2) = 4e-54
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 447  LVVKAVKTSRSGYL 488
            LV  AVKTSRSGYL
Sbjct: 1133 LVDTAVKTSRSGYL 1146


>gb|EEE66008.1| hypothetical protein OsJ_21959 [Oryza sativa Japonica Group]
          Length = 994

 Score =  213 bits (541), Expect(2) = 4e-54
 Identities = 104/135 (77%), Positives = 115/135 (85%)
 Frame = +2

Query: 56   MVLQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMTI 235
            M LQ E+EK IR NGE+AT  LDR MSS LN +TS+VN  +FP GL+KPFP NCLS+MT 
Sbjct: 711  MKLQMEVEKIIRRNGESATVILDRNMSSELNTLTSKVNKKVFPYGLRKPFPGNCLSLMTQ 770

Query: 236  SGAKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTGL 415
            +GAKG  VN +QISSLLGQQELEGKRVPRMISGKTLP F PWD +SR+GGFIGDRFLTGL
Sbjct: 771  TGAKGGLVNMTQISSLLGQQELEGKRVPRMISGKTLPCFPPWDTSSRAGGFIGDRFLTGL 830

Query: 416  RPQEYYFHCMAGREG 460
            RPQEYYFHCMAGREG
Sbjct: 831  RPQEYYFHCMAGREG 845



 Score = 24.6 bits (52), Expect(2) = 4e-54
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  AVKTSRSGYL
Sbjct: 846 LVDTAVKTSRSGYL 859


>gb|AAS55439.1| RNA polymerase I largest subunit [Ephedra viridis]
          Length = 534

 Score =  212 bits (540), Expect(2) = 5e-54
 Identities = 99/133 (74%), Positives = 118/133 (88%)
 Frame = +2

Query: 62  LQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMTISG 241
           ++EEIEK +R+ GE+++ RLDR+MS +LN+ITSEVN  +FP+GL+KPF KNCLS+MT++G
Sbjct: 237 IEEEIEKILRSKGESSSARLDRLMSGALNKITSEVNGSVFPDGLRKPFLKNCLSLMTLTG 296

Query: 242 AKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTGLRP 421
           AKG  VNF+QISSLLGQQELEGKRVPRMISGKTLP F PWD   R+GGFI DRFLTGLRP
Sbjct: 297 AKGGMVNFTQISSLLGQQELEGKRVPRMISGKTLPCFSPWDIQPRAGGFISDRFLTGLRP 356

Query: 422 QEYYFHCMAGREG 460
           QEYYFHCMAGR+G
Sbjct: 357 QEYYFHCMAGRDG 369



 Score = 24.6 bits (52), Expect(2) = 5e-54
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  AVKTSRSGYL
Sbjct: 370 LVDTAVKTSRSGYL 383


>gb|ACJ63316.1| RNA polymerase I large subunit [Nymphaea odorata]
          Length = 542

 Score =  212 bits (539), Expect(2) = 9e-54
 Identities = 101/136 (74%), Positives = 113/136 (83%)
 Frame = +2

Query: 53  PMVLQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMT 232
           P+ LQ EIE  +RTNGE+AT RLD +MSS LN +T+E+N  LFP GL KPFP NC+ +MT
Sbjct: 250 PISLQREIENVLRTNGESATERLDALMSSELNELTNELNKKLFPVGLVKPFPNNCVFLMT 309

Query: 233 ISGAKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTG 412
            SGAKGS VNF QISSLLGQQELEGKRVPRM+SGKTLP F PWD A R+GGFI DRFLTG
Sbjct: 310 ASGAKGSNVNFIQISSLLGQQELEGKRVPRMVSGKTLPCFPPWDTAPRAGGFISDRFLTG 369

Query: 413 LRPQEYYFHCMAGREG 460
           L PQEYYFHCMAGR+G
Sbjct: 370 LHPQEYYFHCMAGRDG 385



 Score = 24.3 bits (51), Expect(2) = 9e-54
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  A+KTSRSGYL
Sbjct: 386 LVDTAIKTSRSGYL 399


>gb|ACJ63314.1| RNA polymerase I large subunit [Illicium parviflorum]
          Length = 540

 Score =  213 bits (542), Expect(2) = 9e-54
 Identities = 99/133 (74%), Positives = 117/133 (87%)
 Frame = +2

Query: 62  LQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMTISG 241
           ++EE EK +R+ G+ A+ RLDR+MSS+LNR+TSEVN+ LFP GL KPFP NCLS+MT++G
Sbjct: 251 MEEETEKHLRSKGDAASARLDRLMSSALNRVTSEVNNALFPKGLLKPFPSNCLSLMTMTG 310

Query: 242 AKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTGLRP 421
           AKG  VNF+QISSLLGQQELEGKRVPR+ISGKTLP F PWD  +R+GGFI DRFLTGLRP
Sbjct: 311 AKGGLVNFTQISSLLGQQELEGKRVPRVISGKTLPCFLPWDSRARAGGFISDRFLTGLRP 370

Query: 422 QEYYFHCMAGREG 460
           QEYYFHCMAGR+G
Sbjct: 371 QEYYFHCMAGRDG 383



 Score = 23.1 bits (48), Expect(2) = 9e-54
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  A+KT+RSGYL
Sbjct: 384 LVDTAIKTTRSGYL 397


>gb|AAS55436.1| RNA polymerase I largest subunit [Podocarpus macrophyllus]
          Length = 550

 Score =  211 bits (537), Expect(2) = 1e-53
 Identities = 100/133 (75%), Positives = 114/133 (85%)
 Frame = +2

Query: 62  LQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMTISG 241
           L E+IEK +R  G+ A+ RLDR+MSS+LNRITS+VN+ +FP GL K FP NCLS+MT SG
Sbjct: 253 LGEDIEKVLRNKGDAASARLDRLMSSALNRITSDVNNSIFPKGLLKSFPSNCLSLMTTSG 312

Query: 242 AKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTGLRP 421
           AKG  VNF+QISSLLGQQELEGKRVPRMISGKTLP F PWD  +R+GGFI DRFLTGLRP
Sbjct: 313 AKGGLVNFTQISSLLGQQELEGKRVPRMISGKTLPCFPPWDTRARAGGFISDRFLTGLRP 372

Query: 422 QEYYFHCMAGREG 460
           QEYYFHCMAGR+G
Sbjct: 373 QEYYFHCMAGRDG 385



 Score = 24.6 bits (52), Expect(2) = 1e-53
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  AVKTSRSGYL
Sbjct: 386 LVDTAVKTSRSGYL 399


>gb|AAS55438.1| RNA polymerase I largest subunit [Welwitschia mirabilis]
          Length = 543

 Score =  211 bits (537), Expect(2) = 1e-53
 Identities = 99/133 (74%), Positives = 116/133 (87%)
 Frame = +2

Query: 62  LQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMTISG 241
           ++EEIEK +R+ GETA+ RLDR+MSS+LN +TS+VN+ LFP GL  PFPKNCLS+MT +G
Sbjct: 253 MEEEIEKILRSKGETASARLDRLMSSALNGVTSDVNNSLFPKGLLVPFPKNCLSLMTTTG 312

Query: 242 AKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTGLRP 421
           AKG  VNF+QISSLLGQQELEGKRVPRM+SGKTLP F PWD + R+GGFI DRFLTGLR 
Sbjct: 313 AKGGMVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFSPWDSSPRAGGFISDRFLTGLRL 372

Query: 422 QEYYFHCMAGREG 460
           QEYYFHCMAGR+G
Sbjct: 373 QEYYFHCMAGRDG 385



 Score = 24.6 bits (52), Expect(2) = 1e-53
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  AVKTSRSGYL
Sbjct: 386 LVDTAVKTSRSGYL 399


>gb|AAS55445.1| RNA polymerase I largest subunit [Ginkgo biloba]
          Length = 542

 Score =  209 bits (532), Expect(2) = 6e-53
 Identities = 98/133 (73%), Positives = 115/133 (86%)
 Frame = +2

Query: 62  LQEEIEKTIRTNGETATTRLDRMMSSSLNRITSEVNDMLFPNGLQKPFPKNCLSVMTISG 241
           ++EE EK +R+ G+ A+ RLDR+MSS+LNR+TSEVN+ LFP GL KPFP NCLS+MT++G
Sbjct: 253 MEEETEKHLRSKGDAASARLDRLMSSALNRVTSEVNNALFPKGLLKPFPSNCLSLMTMTG 312

Query: 242 AKGSTVNFSQISSLLGQQELEGKRVPRMISGKTLPSFHPWDPASRSGGFIGDRFLTGLRP 421
           AKG  VNF+QISSLLGQQELEGKRVPRMISGKTLP F PWD  +R+GGFI DRFLTGLRP
Sbjct: 313 AKGGLVNFTQISSLLGQQELEGKRVPRMISGKTLPCFLPWDSRARAGGFISDRFLTGLRP 372

Query: 422 QEYYFHCMAGREG 460
           QEYYF CMA R+G
Sbjct: 373 QEYYFQCMAARDG 385



 Score = 24.3 bits (51), Expect(2) = 6e-53
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 447 LVVKAVKTSRSGYL 488
           LV  A+KTSRSGYL
Sbjct: 386 LVDTAIKTSRSGYL 399