BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00054954
         (505 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    98   6e-25
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    99   2e-24
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...    92   2e-23
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               100   9e-23
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    96   1e-22
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   100   2e-22
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    97   2e-22
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...    91   3e-21
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    96   4e-21
gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             93   4e-21
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    91   5e-21
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                95   3e-20
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   103   3e-20
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   91   4e-20
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    92   5e-20
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   102   6e-20
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   102   6e-20
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    92   7e-20
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            92   7e-20
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...   102   7e-20

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 97.8 bits (242), Expect(2) = 6e-25
 Identities = 53/127 (41%), Positives = 74/127 (58%)
 Frame = +3

Query: 3    SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
            SSRGLRQGC LSPYLFVI M++LS  L        +  HPKCK   LTHL FADD++V  
Sbjct: 652  SSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLS 711

Query: 183  KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
             G            ++F+ +S L I+  K+++Y + +  +   ++      S+ +LPVRY
Sbjct: 712  DGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRY 771

Query: 363  LGILLIT 383
            LG+ LIT
Sbjct: 772  LGLPLIT 778



 Score = 42.0 bits (97), Expect(2) = 6e-25
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = +1

Query: 391 LSYQDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
           LS  DCLPL+ +V KR  SW S+ +SYA +L LI  VL
Sbjct: 781 LSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVL 818


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 98.6 bits (244), Expect(2) = 2e-24
 Identities = 52/124 (41%), Positives = 70/124 (56%)
 Frame = +3

Query: 12   GLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFFKGX 191
            GLRQGC LSPYLFVI M +LS  L       R+  HP+C+   LTHLCFADD++VF  G 
Sbjct: 910  GLRQGCSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGS 969

Query: 192  XXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRYLGI 371
                       +DF+ FS L I+  K++L+ + +       I+      +  LPVRYLG+
Sbjct: 970  AHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGL 1029

Query: 372  LLIT 383
             L+T
Sbjct: 1030 PLMT 1033



 Score = 39.3 bits (90), Expect(2) = 2e-24
 Identities = 15/38 (39%), Positives = 26/38 (68%)
 Frame = +1

Query: 391  LSYQDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
            ++  DCLPL+ ++  R  SWK++ +SYA +L L+  V+
Sbjct: 1036 MTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVI 1073


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
           subsp. vesca]
          Length = 958

 Score = 91.7 bits (226), Expect(2) = 2e-23
 Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
 Frame = +3

Query: 9   RGLRQGCPLSPYLFVIVMEILSISLKYQVDIGR-YELHPKCKVTKLTHLCFADDVLVFFK 185
           RGLRQG PLSPYLFVI ME+LS+ ++ +++    +  H +C    L+HLCFADD+L+F  
Sbjct: 475 RGLRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCN 534

Query: 186 GXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRYL 365
           G             +F   S L+ N S++ ++ + V  +    ++   + S    PVRYL
Sbjct: 535 GDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYL 594

Query: 366 GILLITS 386
           GI LITS
Sbjct: 595 GIPLITS 601



 Score = 42.7 bits (99), Expect(2) = 2e-23
 Identities = 19/38 (50%), Positives = 27/38 (71%)
 Frame = +1

Query: 391 LSYQDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
           L  QDC PL+ R+  R KSW++K +S+A +L LI+ VL
Sbjct: 603 LRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVL 640


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  100 bits (249), Expect(2) = 9e-23
 Identities = 55/127 (43%), Positives = 75/127 (59%)
 Frame = +3

Query: 3   SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
           SSRGLRQGC LSPYLFVI M++LS  L   V IGR   HP CK   LTHL FADD+++  
Sbjct: 205 SSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMILT 264

Query: 183 KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
            G            + FS +S L+I+  K++++S+ +  +   Q+         ELP+RY
Sbjct: 265 DGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLSSTSRAQLHTHFPFEVGELPIRY 324

Query: 363 LGILLIT 383
           LG+ L+T
Sbjct: 325 LGLPLVT 331



 Score = 32.0 bits (71), Expect(2) = 9e-23
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 391 LSYQDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
           LS  D  PLI ++ KR  SW S+ +S+A +  LI  ++
Sbjct: 334 LSSVDYAPLIEQIRKRIGSWSSRFLSFAGRFNLISSII 371


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 95.5 bits (236), Expect(2) = 1e-22
 Identities = 50/127 (39%), Positives = 75/127 (59%)
 Frame = +3

Query: 3   SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
           S+R LRQGC LSPYLFVI M++LS  L   V   ++  HPKC+   LTHL FADD+++  
Sbjct: 540 SARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMILS 599

Query: 183 KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
            G           + +F+ +S L+I+  K+++Y + V  S   +I+        +LPVRY
Sbjct: 600 DGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRY 659

Query: 363 LGILLIT 383
           LG+ L++
Sbjct: 660 LGLPLVS 666



 Score = 36.6 bits (83), Expect(2) = 1e-22
 Identities = 16/38 (42%), Positives = 26/38 (68%)
 Frame = +1

Query: 391 LSYQDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
           L+  DCLPLI ++ K+ ++W S+ +S+A +L LI   L
Sbjct: 669 LTASDCLPLIEQLRKKIEAWTSRFLSFAGRLNLISSTL 706


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  100 bits (248), Expect(2) = 2e-22
 Identities = 55/127 (43%), Positives = 70/127 (55%)
 Frame = +3

Query: 3    SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
            S RGLRQGC LSPYLFVI M +LS  +           HPKCK   LTHLCFADD++VF 
Sbjct: 794  SKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFI 853

Query: 183  KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
             G            +DF+  S L I+  K++LY + V       I+     ++ +LPVRY
Sbjct: 854  DGQQRSVEGVINIFKDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRY 913

Query: 363  LGILLIT 383
            LG  L+T
Sbjct: 914  LGFPLLT 920



 Score = 31.6 bits (70), Expect(2) = 2e-22
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 403  DCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
            D  PL+ +V  +  SW ++ +SYA +L LI  V+
Sbjct: 927  DYSPLLDKVRSKISSWTARSLSYAGRLALINSVI 960


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 96.7 bits (239), Expect(2) = 2e-22
 Identities = 50/127 (39%), Positives = 71/127 (55%)
 Frame = +3

Query: 3    SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
            S RGLRQGC LSPYL+VI M +LS  L       +   HP+C+   LTHLCFADD++VF 
Sbjct: 799  SERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFADDIMVFS 858

Query: 183  KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
             G            E F+  S L+I+  K++++ + + P+    I+         LPV+Y
Sbjct: 859  DGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKY 918

Query: 363  LGILLIT 383
            LG+ L+T
Sbjct: 919  LGLPLLT 925



 Score = 34.7 bits (78), Expect(2) = 2e-22
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +1

Query: 391  LSYQDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
            ++  D LPL+ ++  R  SW ++ +S+A +L LIK VL
Sbjct: 928  MTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVL 965


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
           lycopersicum]
          Length = 717

 Score = 91.3 bits (225), Expect(2) = 3e-21
 Identities = 51/125 (40%), Positives = 72/125 (57%)
 Frame = +3

Query: 3   SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
           +++GLRQG P+SP+LF I ME LS  LK   +   ++ HPK     +THLCFADD+L+F 
Sbjct: 445 AAKGLRQGDPMSPFLFAIAMEYLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFS 504

Query: 183 KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
           +G             +FS  S L+ N +K+S+Y   V      QII  L  + +ELP +Y
Sbjct: 505 RGDLNSIKALQKCFTEFSQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKY 564

Query: 363 LGILL 377
           LG+ L
Sbjct: 565 LGVPL 569



 Score = 36.2 bits (82), Expect(2) = 3e-21
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = +1

Query: 412 PLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
           PLI +V  R  SW +KK+SYA +  L+K VL
Sbjct: 581 PLIEKVMARINSWTAKKLSYAGRAQLVKTVL 611


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 95.5 bits (236), Expect(2) = 4e-21
 Identities = 52/130 (40%), Positives = 73/130 (56%)
 Frame = +3

Query: 3   SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
           S RGLRQGC L+PYLFVIVM++LS  L     + ++  HPKCK   LTHL FADD++V  
Sbjct: 170 SLRGLRQGCSLTPYLFVIVMDVLSKKLDRAAGLRKFGYHPKCKNLGLTHLSFADDIMVLT 229

Query: 183 KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
            G            + F+  S L+I+ +KT++Y + +  S   +       +   LPVRY
Sbjct: 230 DGKLRSLEGIVEVFDSFAKQSGLKISMAKTTIYFAGISKSVCKEFEDQFHFAVGRLPVRY 289

Query: 363 LGILLITSNF 392
           L + L+T  F
Sbjct: 290 LCLPLVTKRF 299



 Score = 31.6 bits (70), Expect(2) = 4e-21
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +1

Query: 400 QDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
           QD  PL+ ++ +R  +W ++ +SYA +L L+  VL
Sbjct: 302 QDYSPLLEQIKRRIGTWTARFLSYAGRLNLVSSVL 336


>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 92.8 bits (229), Expect(2) = 4e-21
 Identities = 48/121 (39%), Positives = 67/121 (55%)
 Frame = +3

Query: 9   RGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFFKG 188
           RGLRQG PLSPYLF+I ME+LS  L     IG+ +LH KC    LTHL FADD+++F K 
Sbjct: 18  RGLRQGDPLSPYLFIIAMEVLSRKLDQAASIGQLQLHSKCANPLLTHLIFADDLVIFSKA 77

Query: 189 XXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRYLG 368
                      +  F   S LE+N  K  ++   +  SE  ++  C+  +    P++YLG
Sbjct: 78  SRQSMQAVQNCLNWFGRNSGLEVNTGKCEMFLGGLTDSEKQELSSCMGITLGNFPMKYLG 137

Query: 369 I 371
           +
Sbjct: 138 L 138



 Score = 34.3 bits (77), Expect(2) = 4e-21
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 391 LSYQDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
           L+  D  PL+ ++  +  +W SK +SYA K+ L+ VV+
Sbjct: 145 LTKADYEPLLEKIRAKVSNWSSKLLSYAGKIQLVSVVI 182


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 90.5 bits (223), Expect(2) = 5e-21
 Identities = 50/127 (39%), Positives = 71/127 (55%)
 Frame = +3

Query: 3   SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
           S+RGLRQGC LSPYLFV+ M +LS  L       R+  HP+CK   LTHL FADD++V  
Sbjct: 34  STRGLRQGCSLSPYLFVVSMNVLSKLLDKATGQRRFGYHPRCKQMGLTHLSFADDLMVLS 93

Query: 183 KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
            G            E F+  S L I+  K+++Y + +  +   +++     +   LPVRY
Sbjct: 94  DGKVRSIEGIVEVFETFAKCSGLRISMEKSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRY 153

Query: 363 LGILLIT 383
           LG+ L+T
Sbjct: 154 LGLPLVT 160



 Score = 36.2 bits (82), Expect(2) = 5e-21
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = +1

Query: 391 LSYQDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
           LS  D LPLI  + K+  SW ++ +SYA +L LI  VL
Sbjct: 163 LSSTDYLPLIEHIKKKIGSWSARFLSYAGRLNLISSVL 200


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 94.7 bits (234), Expect(2) = 3e-20
 Identities = 53/127 (41%), Positives = 71/127 (55%)
 Frame = +3

Query: 3   SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
           S RGLRQGC LSPYLFVI M++LS  L     + ++  HPKC+   LTHL FADD++V  
Sbjct: 299 SKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLS 358

Query: 183 KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
            G            ++F   S L I+  K++LY + V P    +I         +LPVRY
Sbjct: 359 DGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRY 418

Query: 363 LGILLIT 383
           LG+ L+T
Sbjct: 419 LGLPLVT 425



 Score = 29.3 bits (64), Expect(2) = 3e-20
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 391 LSYQDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
           L+  D  PL+ ++ KR  +W  +  S+A +  LIK VL
Sbjct: 428 LTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVL 465


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  103 bits (256), Expect = 3e-20
 Identities = 55/127 (43%), Positives = 76/127 (59%)
 Frame = +3

Query: 3    SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
            S++GLRQG PLSPYLFV+ ME+ S  LK + D G  + HPK     ++HL FADDV+VFF
Sbjct: 647  SNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDVMVFF 706

Query: 183  KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
             G           ++DF+ +S L +NK KT+LY +     E + I H        LP+RY
Sbjct: 707  DGGSSSLHGISEALDDFASWSGLHVNKDKTNLYLAGTDEVEALAISH-YGFPISTLPIRY 765

Query: 363  LGILLIT 383
            LG+ L++
Sbjct: 766  LGLPLMS 772


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 91.3 bits (225), Expect(2) = 4e-20
 Identities = 49/123 (39%), Positives = 68/123 (55%)
 Frame = +3

Query: 9   RGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFFKG 188
           RGLRQG PLSPYLF++ ME+LS  L       R  LHPKC    +THL FADD+++F  G
Sbjct: 101 RGLRQGDPLSPYLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSG 160

Query: 189 XXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRYLG 368
                      ++ FS  S L +N  KT ++   ++ +E   +   +  +   LPVRYLG
Sbjct: 161 ETRSLLEVKNTLDSFSRASGLYLNTEKTEIFLRGLNGTEASTLCAVIGFTRGYLPVRYLG 220

Query: 369 ILL 377
           + L
Sbjct: 221 VSL 223



 Score = 32.3 bits (72), Expect(2) = 4e-20
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 391 LSYQDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
           L+  D  PL+ RV  +  SW ++ +SYA +L L+  V+
Sbjct: 228 LTKSDYQPLLDRVKAKINSWTTRYLSYAGRLQLVGTVI 265


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 92.0 bits (227), Expect(2) = 5e-20
 Identities = 53/129 (41%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
 Frame = +3

Query: 3   SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
           S+RGLRQGC LSPYLFVI M++LS  L        +  HP+CK   LTHLCFADD+++  
Sbjct: 373 SARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMILT 432

Query: 183 KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVV--HPSELIQIIHCLDCSTDELPV 356
            G           +  F+    L+I   KT+LY + V  H  +L+   +       +LPV
Sbjct: 433 DGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSF--GVGKLPV 490

Query: 357 RYLGILLIT 383
           RYLG+ L+T
Sbjct: 491 RYLGLPLVT 499



 Score = 31.2 bits (69), Expect(2) = 5e-20
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 391 LSYQDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
           L+  D  PLI ++ +R   W S+ +S+A +L LI  VL
Sbjct: 502 LTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVL 539


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  102 bits (254), Expect = 6e-20
 Identities = 55/127 (43%), Positives = 75/127 (59%)
 Frame = +3

Query: 3    SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
            S++GLRQG PLSPYLFV+ ME+ S  LK + D G    HPK     ++HL FADDV+VFF
Sbjct: 647  SNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDVMVFF 706

Query: 183  KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
             G           ++DF+ +S L +NK KT+LY +     E + I H        LP+RY
Sbjct: 707  DGGSSSLHGISEALDDFASWSGLHVNKDKTNLYLAGTDEVEALAISH-YGFPISTLPIRY 765

Query: 363  LGILLIT 383
            LG+ L++
Sbjct: 766  LGLPLMS 772


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  102 bits (254), Expect = 6e-20
 Identities = 56/127 (44%), Positives = 73/127 (57%)
 Frame = +3

Query: 3   SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
           S+RG+RQGC LSPYLFVI ME+LS  L       R+  HPKCK   LTHLCFADD+++  
Sbjct: 57  SARGIRQGCALSPYLFVISMEVLSKMLDQAAGGKRFGFHPKCKNLGLTHLCFADDLMILT 116

Query: 183 KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
            G           +  F+  S L+IN  KT+LY++ V       +I        +LPVRY
Sbjct: 117 DGKVRSVDGIVEVMNLFAKRSGLQINMEKTTLYTAGVSDHNRYMMISRYPFGLGQLPVRY 176

Query: 363 LGILLIT 383
           LG+ L+T
Sbjct: 177 LGLPLVT 183


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 91.7 bits (226), Expect(2) = 7e-20
 Identities = 50/126 (39%), Positives = 72/126 (57%)
 Frame = +3

Query: 3   SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
           S++GLRQG PLSPYLFV+ ME+ S  L  + D G    HPK     ++HL FADDV++FF
Sbjct: 506 STKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFF 565

Query: 183 KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
            G           ++DF+ +S L++NK K+ L+ + +  SE I             P+RY
Sbjct: 566 DGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSERITSA-AYGFPAGTFPIRY 624

Query: 363 LGILLI 380
           LG+ L+
Sbjct: 625 LGLPLM 630



 Score = 31.2 bits (69), Expect(2) = 7e-20
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 391 LSYQDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
           L   D  PL+ ++S R +SW SK +S+A +  LI  V+
Sbjct: 634 LRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVI 671


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 91.7 bits (226), Expect(2) = 7e-20
 Identities = 50/126 (39%), Positives = 72/126 (57%)
 Frame = +3

Query: 3   SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
           S++GLRQG PLSPYLFV+ ME+ S  L  + D G    HPK     ++HL FADDV++FF
Sbjct: 506 STKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFF 565

Query: 183 KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
            G           ++DF+ +S L++NK K+ L+ + +  SE I             P+RY
Sbjct: 566 DGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSERITSA-AYGFPAGTFPIRY 624

Query: 363 LGILLI 380
           LG+ L+
Sbjct: 625 LGLPLM 630



 Score = 31.2 bits (69), Expect(2) = 7e-20
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 391 LSYQDCLPLISRVSKRAKSWKSKKISYARKLLLIKVVL 504
           L   D  PL+ ++S R +SW SK +S+A +  LI  V+
Sbjct: 634 LRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVI 671


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score =  102 bits (253), Expect = 7e-20
 Identities = 56/127 (44%), Positives = 73/127 (57%)
 Frame = +3

Query: 3   SSRGLRQGCPLSPYLFVIVMEILSISLKYQVDIGRYELHPKCKVTKLTHLCFADDVLVFF 182
           S+RG+RQGC LSPYLFVI ME+LS  L       R+  HPKCK   LTHLCFADD+++  
Sbjct: 569 SARGIRQGCALSPYLFVISMEVLSKMLDQAAGAKRFGFHPKCKNLGLTHLCFADDLMILT 628

Query: 183 KGXXXXXXXXXXXIEDFS*FSDLEINKSKTSLYSSVVHPSELIQIIHCLDCSTDELPVRY 362
            G           +  F+  S L+IN  KT+LY++ V       +I        +LPVRY
Sbjct: 629 DGKVRSVDGIVEVMNLFAKRSGLKINMEKTTLYTAGVSDHNRHMMISRYPFGLAQLPVRY 688

Query: 363 LGILLIT 383
           LG+ L+T
Sbjct: 689 LGLPLVT 695