BLASTX nr result
ID: Papaver27_contig00054840
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00054840
(850 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 69 2e-20
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 70 1e-17
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 60 6e-15
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 76 6e-14
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 49 6e-13
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 49 6e-13
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 49 1e-12
dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like ... 49 2e-12
gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana] 52 1e-11
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta... 54 1e-10
dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like ... 71 5e-10
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 64 5e-10
ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein A... 55 2e-09
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678... 63 1e-08
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 63 1e-08
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana] 66 1e-08
ref|XP_004305958.1| PREDICTED: uncharacterized protein LOC101308... 45 1e-08
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta... 65 2e-08
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 64 6e-08
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali... 62 9e-08
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 68.9 bits (167), Expect(3) = 2e-20
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = -1
Query: 826 VVCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKITQ 647
+VC P E GLG+R++ N + L +W I+S +++WT WV + LI+ K W+LK +
Sbjct: 511 IVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQST 570
Query: 646 DI-SWYWRILVEQREVAKKLS 587
+ SW WR +++ R+VAK S
Sbjct: 571 SMGSWIWRKILKIRDVAKSFS 591
Score = 48.5 bits (114), Expect(3) = 2e-20
Identities = 22/98 (22%), Positives = 44/98 (44%)
Frame = -1
Query: 343 KEPISSVSYTMEDTYKTLEGGKDIVLWSNLV*FKSHVLRFSFITWLGLYERLKTRAKMVK 164
K + ++ DT+ ++ V W V F+ +++ TWL ++ RL T +M+K
Sbjct: 677 KNDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNRLPTGDRMLK 736
Query: 163 WGKLQAARXXXXXXXXXXXXXDHIFHTFSFAASIWMGL 50
W + +H+F + S+A+++W L
Sbjct: 737 WNSSGSVSGNCVLCTNNSKTLEHLFFSCSYASTVWAAL 774
Score = 28.9 bits (63), Expect(3) = 2e-20
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVDWMSRDIIDDLCISSNCKVDD 457
+G+GE F D W +GRL+D + DL I V D
Sbjct: 595 VGNGESASFWYDHWSAHGRLIDTVGDKGTIDLGIPREASVAD 636
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 69.7 bits (169), Expect(3) = 1e-17
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = -1
Query: 826 VVCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKIT- 650
+VC P +E GLG+R + N L +W IVS +++W WV ++L++ FW +K T
Sbjct: 864 MVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTV 923
Query: 649 QDISWYWRILVEQREVAKKLS 587
SW W+ L++ REVAK LS
Sbjct: 924 SQGSWIWKKLLKYREVAKTLS 944
Score = 42.0 bits (97), Expect(3) = 1e-17
Identities = 24/98 (24%), Positives = 40/98 (40%)
Frame = -1
Query: 343 KEPISSVSYTMEDTYKTLEGGKDIVLWSNLV*FKSHVLRFSFITWLGLYERLKTRAKMVK 164
K + +++ DT+ V W ++ F ++SF +WL + RL T +M+
Sbjct: 1030 KSDVFRTTFSTRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMIN 1089
Query: 163 WGKLQAARXXXXXXXXXXXXXDHIFHTFSFAASIWMGL 50
W DH+F T SF + IW+ L
Sbjct: 1090 WA--NGIATDCIFCQGTLETRDHLFFTCSFTSVIWVDL 1125
Score = 25.0 bits (53), Expect(3) = 1e-17
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVDWMSRDIIDDLCISSNCKVDD 457
+G+G++T F D W G+L++ + DL IS V++
Sbjct: 948 VGNGKQTSFWYDNWSDLGQLLERTGDRGLIDLGISRRMTVEE 989
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 60.5 bits (145), Expect(3) = 6e-15
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = -1
Query: 829 SVVCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKIT 650
S VC E GLG++ + N + L +W I+S + ++W WV K+LI+ + FW++K
Sbjct: 1010 SEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKEN 1069
Query: 649 QDI-SWYWRILVEQREVAK 596
+ SW WR +++QR+ A+
Sbjct: 1070 TGLGSWLWRKILKQRDKAR 1088
Score = 43.5 bits (101), Expect(3) = 6e-15
Identities = 27/107 (25%), Positives = 45/107 (42%)
Frame = -1
Query: 343 KEPISSVSYTMEDTYKTLEGGKDIVLWSNLV*FKSHVLRFSFITWLGLYERLKTRAKMVK 164
KE S++ T++ + W V F + ++SF+TWL + RL T K+ K
Sbjct: 1177 KEDTFKSSFSSSKTWQQIRSISLRCDWYRGVWFSASTPKYSFVTWLAFHNRLTTSDKICK 1236
Query: 163 WGKLQAARXXXXXXXXXXXXXDHIFHTFSFAASIWMGLLLKMGYSRN 23
W AR DH+F + +++ +W L + RN
Sbjct: 1237 WN--SGARYDCVFCGEELETRDHLFFSCPYSSHVWFSLTKGLLNGRN 1281
Score = 23.5 bits (49), Expect(3) = 6e-15
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVDWMSRDIIDDLCISSNCKVDDFLD 448
+ G T F D W P GRL M DL I +N V + ++
Sbjct: 1095 VRSGTFTSFWHDHWCPLGRLHQHMGSRGTIDLGIPNNATVAEVMN 1139
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 75.9 bits (185), Expect(2) = 6e-14
Identities = 32/76 (42%), Positives = 47/76 (61%)
Frame = -1
Query: 829 SVVCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKIT 650
S +C P E GLG++D+H N A + H+W++VS S WT+WV+ L+KG FW +
Sbjct: 685 SEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLP 744
Query: 649 QDISWYWRILVEQREV 602
SW WR L++ RE+
Sbjct: 745 SICSWNWRKLLKIREL 760
Score = 28.5 bits (62), Expect(2) = 6e-14
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVDWMSRDIIDDLCISSNCKVDDFLDDEGWY 433
IGDG T D WHP G L S +II + +S + L G+Y
Sbjct: 769 IGDGRATSLWFDNWHPLGPLTLRWSSNIIGESGLSKSA----MLTPNGFY 814
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 48.9 bits (115), Expect(3) = 6e-13
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = -1
Query: 820 CSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKITQDI 641
C P +E GLG R N L +W + R +++W W + + + FW + Q
Sbjct: 719 CLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQTD 778
Query: 640 SWYWRILVEQREVAKK 593
W W++L+ R +A+K
Sbjct: 779 PWTWKMLLNLRPLAEK 794
Score = 40.0 bits (92), Expect(3) = 6e-13
Identities = 22/101 (21%), Positives = 44/101 (43%)
Frame = -1
Query: 340 EPISSVSYTMEDTYKTLEGGKDIVLWSNLV*FKSHVLRFSFITWLGLYERLKTRAKMVKW 161
+ + ++ T++ L + + W+ V FK V + +F W RL TR ++V W
Sbjct: 885 DDVDCQGFSAAKTWEVLRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSW 944
Query: 160 GKLQAARXXXXXXXXXXXXXDHIFHTFSFAASIWMGLLLKM 38
G + +A DH+ F++ +W + L++
Sbjct: 945 GLVSSAE--CCLCSFDTETRDHLLLLCDFSSQVWRMVFLRL 983
Score = 31.6 bits (70), Expect(3) = 6e-13
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVDWMSRDIIDDLCISSNCKVDDFLDDEGWYLP 427
+G+G F D W G L+ ++ L I + KV D +D GW LP
Sbjct: 800 VGNGGTVSFWFDCWTSLGPLIKYLGDVGSRPLRIPFSAKVADAIDGSGWRLP 851
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 48.9 bits (115), Expect(3) = 6e-13
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = -1
Query: 820 CSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKITQDI 641
C P +E GLG R N L +W + R +++W W + + + FW + Q
Sbjct: 719 CLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASFWQVNALQTD 778
Query: 640 SWYWRILVEQREVAKK 593
W W++L+ R +A+K
Sbjct: 779 PWTWKMLLNLRPLAEK 794
Score = 40.0 bits (92), Expect(3) = 6e-13
Identities = 22/101 (21%), Positives = 44/101 (43%)
Frame = -1
Query: 340 EPISSVSYTMEDTYKTLEGGKDIVLWSNLV*FKSHVLRFSFITWLGLYERLKTRAKMVKW 161
+ + ++ T++ L + + W+ V FK V + +F W RL TR ++V W
Sbjct: 885 DDVDCQGFSAAKTWEVLRPRRPVKRWARSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSW 944
Query: 160 GKLQAARXXXXXXXXXXXXXDHIFHTFSFAASIWMGLLLKM 38
G + +A DH+ F++ +W + L++
Sbjct: 945 GLVSSAE--CCLCSFDTETRDHLLLLCDFSSQVWRMVFLRL 983
Score = 31.6 bits (70), Expect(3) = 6e-13
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVDWMSRDIIDDLCISSNCKVDDFLDDEGWYLP 427
+G+G F D W G L+ ++ L I + KV D +D GW LP
Sbjct: 800 VGNGGTVSFWFDCWTSLGPLIKYLGDVGSRPLRIPFSAKVADAIDGSGWRLP 851
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 48.9 bits (115), Expect(3) = 1e-12
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = -1
Query: 829 SVVCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNW-VQKNLIKGKDFWTLKI 653
S VC P E G+G+R ++N L +W + S ++W W Q +L K FW
Sbjct: 753 SQVCLPKAEGGIGLRRFAVSNRTLYLRMIWLLFSNSGSLWVAWHKQHSLGKSTSFWNQPE 812
Query: 652 TQDISWYWRILVEQREVAKK 593
SW W+ L+ R VA++
Sbjct: 813 KPHDSWNWKCLLRLRVVAER 832
Score = 39.3 bits (90), Expect(3) = 1e-12
Identities = 20/78 (25%), Positives = 31/78 (39%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVDWMSRDIIDDLCISSNCKVDDFLDDEGWYLPDTMDEDFS 403
+G+G F D W P G L+ ++ + DL + N K+ D EGW + D +
Sbjct: 838 VGNGRDASFWFDNWTPFGPLIKFLGNEGPRDLRVHLNAKISDVCTSEGWSIADPRSDQAL 897
Query: 402 QTVVQLKEVEYDVSETDL 349
L + DL
Sbjct: 898 SLHTHLTNISMPSDAQDL 915
Score = 31.6 bits (70), Expect(3) = 1e-12
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 304 TYKTLEGGKDIVLWSNLV*FKSHVLRFSFITWLGLYERLKTRAKMVKWG 158
T+ L V W+ V FK + +F W +RL T+ ++ WG
Sbjct: 935 TWSALRPSSAPVPWARAVWFKGATPKHAFHLWTAHLDRLPTKVRLASWG 983
>dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 637
Score = 49.3 bits (116), Expect(3) = 2e-12
Identities = 19/48 (39%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = -1
Query: 736 IVSRKSTIWTNWVQKNLIKGKDFWTLKITQDI-SWYWRILVEQREVAK 596
+VS K ++W WV KNLI+ + FW++K + SW W+ +++QR+ A+
Sbjct: 117 VVSAKDSLWVQWVYKNLIRKETFWSVKENTSLGSWLWKKILKQRDKAR 164
Score = 44.7 bits (104), Expect(3) = 2e-12
Identities = 29/110 (26%), Positives = 48/110 (43%)
Frame = -1
Query: 343 KEPISSVSYTMEDTYKTLEGGKDIVLWSNLV*FKSHVLRFSFITWLGLYERLKTRAKMVK 164
KE S++ T++ + + W V F S ++SF+TWL + RL T ++ K
Sbjct: 253 KEDSFKGSFSSPKTWQQIRTISNECEWYRGVWFPSSTPKYSFVTWLAFHNRLATGDRLYK 312
Query: 163 WGKLQAARXXXXXXXXXXXXXDHIFHTFSFAASIWMGLLLKMGYSRNPCS 14
W AR DH+F + +++ IW+ L + RN S
Sbjct: 313 WN--SEARATCVFCDEELETRDHLFFSCPYSSQIWIALAKGLLNGRNVSS 360
Score = 25.0 bits (53), Expect(3) = 2e-12
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVDWMSRDIIDDLCISSNCKVDDFLD 448
+ G T F D W P GRL + DL I++ V + LD
Sbjct: 171 VRSGTTTSFWHDHWSPLGRLHQHLGSRGTIDLGIATQATVAEVLD 215
>gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana]
Length = 438
Score = 52.4 bits (124), Expect(3) = 1e-11
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -1
Query: 829 SVVCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNW-VQKNLIKG-KDFWTLK 656
S VC P E GLGVR N A NL +W + S ++W W + NL +FW +K
Sbjct: 127 STVCLPKAEGGLGVRKFTEWNTALNLKLIWLLFSNSGSLWVAWHLFHNLSTSVSNFWLIK 186
Query: 655 ITQDISWYWRILVEQREVAKK 593
SW WR L+ R +A K
Sbjct: 187 EGTTDSWNWRCLLRLRPLASK 207
Score = 35.0 bits (79), Expect(3) = 1e-11
Identities = 23/102 (22%), Positives = 44/102 (43%)
Frame = -1
Query: 340 EPISSVSYTMEDTYKTLEGGKDIVLWSNLV*FKSHVLRFSFITWLGLYERLKTRAKMVKW 161
E S + ++ T+ L + W + V FK + +F W+ +RL+T+ +M+ W
Sbjct: 298 ENCSDIGFSSAHTWNALRHKEVEKPWVSSVWFKGVTPKNAFNMWITHQDRLRTKLRMIAW 357
Query: 160 GKLQAARXXXXXXXXXXXXXDHIFHTFSFAASIWMGLLLKMG 35
G L DH+ + F+ S+W + ++G
Sbjct: 358 GFL--VSPVCALCQVGFETRDHLMLSCDFSVSVWALVRQRIG 397
Score = 28.9 bits (63), Expect(3) = 1e-11
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVDWMSRDIIDDLCISSNCKVDDFLDDEGWYLP 427
IG+G F D W P G L+ ++ D + I KV D ++ W LP
Sbjct: 213 IGNGLTASFWADSWTPFGPLLTFIGSDGPRNQRIPLCSKVADVVNGNRWLLP 264
>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1447
Score = 53.9 bits (128), Expect(3) = 1e-10
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Frame = -1
Query: 745 MWDIVSRKSTIWTNWVQKNLIKGKDFWTLKITQDI-SWYWRILVEQREVAK---KLSMHW 578
+W I+S ++W W++ NL+K FW +K + + SW W+ L++ REVAK K+ +H
Sbjct: 1115 IWRILSHGDSLWVKWIETNLLKNNSFWIIKSSTTMGSWMWKKLLKYREVAKTFSKIEVHN 1174
Query: 577 G 575
G
Sbjct: 1175 G 1175
Score = 35.4 bits (80), Expect(3) = 1e-10
Identities = 21/95 (22%), Positives = 36/95 (37%)
Frame = -1
Query: 343 KEPISSVSYTMEDTYKTLEGGKDIVLWSNLV*FKSHVLRFSFITWLGLYERLKTRAKMVK 164
+ I ++ DT+ + V W V F +FSF WL +RL T +M
Sbjct: 1254 RNDIYKPQFSTRDTWNNIRTTATKVTWYKGVWFYQATPKFSFCVWLAALDRLSTGDRMAN 1313
Query: 163 WGKLQAARXXXXXXXXXXXXXDHIFHTFSFAASIW 59
W + + DH+F +++ +W
Sbjct: 1314 WKGVSSG--SCVFCNHPTKSRDHLFFNCPYSSEVW 1346
Score = 23.1 bits (48), Expect(3) = 1e-10
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVDWMSRDIIDDLCISSNCKVDDFLD 448
+ +G++T F D W GR+++++ I DL I + V + D
Sbjct: 1172 VHNGQRTSFWYDDWSCMGRIMNFIGDKGIIDLGIKRDKLVAEVWD 1216
>dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana] gi|93007380|gb|ABE97193.1|
hypothetical protein At5g13655 [Arabidopsis thaliana]
Length = 385
Score = 71.2 bits (173), Expect = 5e-10
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = -1
Query: 829 SVVCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKIT 650
SVVC+P +E GLG+R + TN L +W I+S K ++W +WV+K+L++G W +K T
Sbjct: 22 SVVCTPKSEGGLGLRAVEETNKVCMLKLIWRILSAKGSLWVDWVKKHLLRGGSLWAVKET 81
Query: 649 QDI-SWYWRILVEQREVAK 596
SW W+ L++ R+ AK
Sbjct: 82 SSRGSWIWKKLLKYRDKAK 100
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 64.3 bits (155), Expect(2) = 5e-10
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = -1
Query: 823 VCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKITQD 644
VC P +E GLG+R + N L +W I+S ++W WV+ NL+K + FW +K +
Sbjct: 418 VCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFWIVKENAN 477
Query: 643 I-SWYWRILVEQREVAKK 593
+ SW W+ +++ R VAK+
Sbjct: 478 LGSWIWKKILKYRGVAKR 495
Score = 26.9 bits (58), Expect(2) = 5e-10
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVDWMSRDIIDDLCISSNCKVDD 457
+G+GE T F D W GRL+D D+ IS V D
Sbjct: 501 VGNGESTSFWFDDWSLLGRLIDVAGIRGTIDMGISRTMSVAD 542
>ref|XP_004173049.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
[Cucumis sativus]
Length = 647
Score = 55.1 bits (131), Expect(3) = 2e-09
Identities = 22/76 (28%), Positives = 43/76 (56%)
Frame = -1
Query: 823 VCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKITQD 644
VC P++E GL + D N A+ L +W ++ + ++W WV+ ++KG+ W +
Sbjct: 317 VCLPFDEGGLAICDGSSWNKASTLKILWLLLVKSGSLWVAWVEAYILKGRSLWEIDAGAG 376
Query: 643 ISWYWRILVEQREVAK 596
SW +R ++ +R++ K
Sbjct: 377 RSWCFRAILRKRDILK 392
Score = 28.9 bits (63), Expect(3) = 2e-09
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -1
Query: 322 SYTMEDTYKTLEGGKDIVLWSNLV*FKSHVL--RFSFITWLGLYERLKTRAKMVKWGK 155
S+++ ++T+ V WS L+ ++ R F WL + +RL TR ++ W +
Sbjct: 486 SFSIVSAWETIRPNSSRVGWSGLLWGGGNITVGRVYFCAWLAIRDRLGTRDRLSWWDR 543
Score = 24.6 bits (52), Expect(3) = 2e-09
Identities = 11/48 (22%), Positives = 21/48 (43%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVDWMSRDIIDDLCISSNCKVDDFLDDEG 439
+G+ K L D W G ++ +I D + ++ DF+ +G
Sbjct: 399 LGNVRKCRMLLDAWIQGGMIIQLFGERVIYDAGSRRDARLMDFMGGDG 446
>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
putative protein [Arabidopsis thaliana]
Length = 473
Score = 63.2 bits (152), Expect(2) = 1e-08
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = -1
Query: 823 VCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKITQD 644
VC P E GLG+R + N L +W I+S ++W W+Q +L+K FW ++
Sbjct: 114 VCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVSFWAVRENTS 173
Query: 643 I-SWYWRILVEQREVAKKL 590
+ SW WR +++ R++A+ L
Sbjct: 174 LGSWMWRKILKFRDIARTL 192
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVD 517
I +G +T F D W GRL+D
Sbjct: 197 INNGARTSFWYDDWSDLGRLID 218
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 63.2 bits (152), Expect(2) = 1e-08
Identities = 28/79 (35%), Positives = 43/79 (54%)
Frame = -1
Query: 823 VCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKITQD 644
VC P E GLG++ I N L +W IVS+ ++W W++ L+K FW+ +
Sbjct: 383 VCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQ 442
Query: 643 ISWYWRILVEQREVAKKLS 587
SW W+ L++ R+ AK S
Sbjct: 443 GSWMWKKLLKYRDTAKAFS 461
Score = 23.1 bits (48), Expect(2) = 1e-08
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVD 517
I +GE F D W GRL+D
Sbjct: 465 IRNGETASFWYDDWSSKGRLID 486
>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
Length = 382
Score = 66.2 bits (160), Expect = 1e-08
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = -1
Query: 823 VCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKITQD 644
VC P E GLG+R + N L +W +VS +++W W++K L+K FW++K T +
Sbjct: 282 VCKPKQEGGLGLRPLKEINDVCCLKLIWRLVSHANSLWVQWIEKYLLKADTFWSVKATTN 341
Query: 643 I-SWYWRILVEQREVAKK 593
SW W L++ R+VAK+
Sbjct: 342 RGSWMWSKLIKYRDVAKE 359
>ref|XP_004305958.1| PREDICTED: uncharacterized protein LOC101308407 [Fragaria vesca
subsp. vesca]
Length = 177
Score = 45.1 bits (105), Expect(2) = 1e-08
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = -1
Query: 748 HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKITQDISWYWRILVEQREVAKKLSMH 581
H+ +++ S++W++W++ N ++ K FW + Q SW WR L++ R+ + H
Sbjct: 4 HIRILLTDDSSLWSSWIKVNFLRDKSFWMVSTPQICSWNWRKLLKIRDFIRPSIKH 59
Score = 41.2 bits (95), Expect(2) = 1e-08
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVDWMSRDIIDDLCISSNCKVDDFLDDEGWYLP 427
IGDG+ TYF D WHP G L+ + + + I SN V + E W P
Sbjct: 61 IGDGKSTYFWHDYWHPFGPLLPRLGPGAMINSGIPSNALVSSIVKGESWCWP 112
>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 977
Score = 65.5 bits (158), Expect = 2e-08
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = -1
Query: 823 VCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKITQD 644
VC P E GLG+R + N L +W IVS +++W W++K L+K + FW +K
Sbjct: 822 VCKPKKEGGLGLRSLKEANDVCCLKVVWKIVSHGNSLWVKWIEKFLLKNETFWFVKENTT 881
Query: 643 I-SWYWRILVEQREVAK 596
+ SW WR L++ RE AK
Sbjct: 882 LGSWMWRKLIKFREKAK 898
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 64.3 bits (155), Expect = 6e-08
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = -1
Query: 823 VCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKITQD 644
+C P E GLG++ + N ++L +W ++S + ++W W + NL+K + FW++
Sbjct: 586 ICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHST 645
Query: 643 I-SWYWRILVEQREVAK 596
+ SW WR L++ REVAK
Sbjct: 646 LGSWIWRRLLKHREVAK 662
>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 62.0 bits (149), Expect(2) = 9e-08
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = -1
Query: 823 VCSPYNEWGLGVRDIHITNCAANL*HMWDIVSRKSTIWTNWVQKNLIKGKDFWTLKITQD 644
VC P E GLG+R + N L +W I+S ++W W+Q +L+K FW ++
Sbjct: 195 VCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVFFWAVRENTS 254
Query: 643 I-SWYWRILVEQREVAKKL 590
+ SW WR +++ R++A+ L
Sbjct: 255 LGSWMWRKILKFRDIARTL 273
Score = 21.6 bits (44), Expect(2) = 9e-08
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 582 IGDGEKTYFLTDLWHPNGRLVD 517
I +G +T F D W GRL++
Sbjct: 278 INNGAQTSFWYDDWSDLGRLIE 299