BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00054541
         (577 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                67   4e-09

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 49/145 (33%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
 Frame = -2

Query: 504 YNGKGLLQVPSPVSLATNYPLKYGSQSKQKFKVAIDECSFCRAKGHWKHQCP*L------ 343
           Y+ KG+L   +P  LA         Q+K   +V  DECSFC+ KGHWK QCP L      
Sbjct: 208 YSEKGILSASNPSVLAVPSKPFSNHQNKPYTRVGFDECSFCKQKGHWKAQCPKLRQQNQA 267

Query: 342 ---VNKESHVVHRLNDNHKDNVVSIGTNSTTYVVHRPHVPSMKPTDMSLLGEQFQKYLST 172
               ++     HR    +K        +  T  V  P       TD + L EQFQK+LS 
Sbjct: 268 WKSGSQSQSNAHRSPQGYKP------PHHNTAAVASPG----SITDPNTLAEQFQKFLSL 317

Query: 171 HQPNVFAKTSVGWSSLFPSGMSSAE 97
            QP   + +S+G      SG+S +E
Sbjct: 318 -QPQAMSASSIGQLPHSSSGISHSE 341