BLASTX nr result

ID: Papaver27_contig00053981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00053981
         (520 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    39   2e-06
ref|XP_007015598.1| Ubiquitin-specific protease 12 isoform 1 [Th...    39   5e-06

>ref|XP_002277700.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Vitis
           vinifera] gi|296084015|emb|CBI24403.3| unnamed protein
           product [Vitis vinifera]
          Length = 1116

 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
 Frame = +1

Query: 295 WHTFDGPQLMKGTRLAVFLTSRDTRA----W--YTRFSLAIINQKNMAQTRKIDGECEFR 456
           W     P+      L+++L   D+ +    W  Y +FSLA++NQ +   T + D + +F 
Sbjct: 82  WRVLIFPKGNNVEHLSMYLDVADSSSLPYGWSRYAQFSLAVVNQIHNKYTVRKDTQHQFN 141

Query: 457 WENDAMGFYEAMPLKELVDP 516
                 GF   MPL EL DP
Sbjct: 142 ARESDWGFTSFMPLSELYDP 161



 Score = 38.1 bits (87), Expect(2) = 2e-06
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +2

Query: 122 SISEHQASATPDSNEYVWKVENFSRLSNETYHSEDFSAHG 241
           S  E+Q    P ++ + W++ENFSRL+ + ++SE+F   G
Sbjct: 40  STVENQPVEDPPTSRFTWRIENFSRLNTKKHYSENFIVGG 79


>ref|XP_007015598.1| Ubiquitin-specific protease 12 isoform 1 [Theobroma cacao]
           gi|508785961|gb|EOY33217.1| Ubiquitin-specific protease
           12 isoform 1 [Theobroma cacao]
          Length = 1117

 Score = 39.3 bits (90), Expect(2) = 5e-06
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 122 SISEHQASATPDSNEYVWKVENFSRLSNETYHSEDFSAHG 241
           S  E+Q    P S+ + WK+ENFSRL+ + ++SE F   G
Sbjct: 41  STVENQPVEDPPSSRFTWKIENFSRLNTKKHYSEVFPVGG 80



 Score = 36.6 bits (83), Expect(2) = 5e-06
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
 Frame = +1

Query: 295 WHTFDGPQLMKGTRLAVFLTSRDTRA----W--YTRFSLAIINQKNMAQTRKIDGECEFR 456
           W     P+      L+++L   D+ +    W  Y +FSLA++NQ +   + + D + +F 
Sbjct: 83  WRILIFPKGNNVDHLSMYLDVADSASLPYGWSRYAQFSLAVVNQIHNKYSIRKDTQHQFN 142

Query: 457 WENDAMGFYEAMPLKELVDP 516
                 GF   MPL EL DP
Sbjct: 143 ARESDWGFTSFMPLGELYDP 162


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