BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00053650
         (414 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838973.1| hypothetical protein AMTR_s00002p00271260 [A...   134   2e-29
ref|XP_002879469.1| pentatricopeptide repeat-containing protein ...   127   1e-27
ref|XP_006296191.1| hypothetical protein CARUB_v10025353mg [Caps...   124   2e-26
ref|NP_180932.1| pentatricopeptide repeat-containing protein [Ar...   123   3e-26
ref|XP_006410519.1| hypothetical protein EUTSA_v10016424mg [Eutr...   122   5e-26
ref|XP_003607763.1| Pentatricopeptide repeat-containing protein ...   119   4e-25
gb|EXB93905.1| hypothetical protein L484_002061 [Morus notabilis]     118   1e-24
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat...   117   2e-24
ref|XP_002525211.1| pentatricopeptide repeat-containing protein,...   117   2e-24
ref|XP_007016122.1| Tetratricopeptide repeat (TPR)-like superfam...   117   2e-24
ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat...   116   3e-24
gb|EYU45383.1| hypothetical protein MIMGU_mgv1a023657mg [Mimulus...   115   5e-24
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
ref|XP_007025629.1| Pentatricopeptide repeat superfamily protein...   115   6e-24
ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containi...   115   6e-24
ref|XP_002532091.1| pentatricopeptide repeat-containing protein,...   115   6e-24
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]   115   6e-24
ref|XP_007023277.1| Pentatricopeptide repeat superfamily protein...   115   8e-24
ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containi...   115   8e-24
ref|XP_002305798.2| pentatricopeptide repeat-containing family p...   114   2e-23

>ref|XP_006838973.1| hypothetical protein AMTR_s00002p00271260 [Amborella trichopoda]
           gi|548841479|gb|ERN01542.1| hypothetical protein
           AMTR_s00002p00271260 [Amborella trichopoda]
          Length = 363

 Score =  134 bits (336), Expect = 2e-29
 Identities = 62/131 (47%), Positives = 89/131 (67%)
 Frame = +3

Query: 3   ADSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLM 182
           +D Y+QN++IQ YS C  L  A Q+FD+MP + VVSWN ++  Y+  G W+++  LF  M
Sbjct: 70  SDPYIQNSLIQAYSACDSLALAHQLFDQMPQRTVVSWNCMMAGYSNHGHWKELYSLFLQM 129

Query: 183 VEESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGE 362
           + ES + PNS+TLV+ ++AC K GDF+ G  +H++I ++   + LNL N L+NMYAK GE
Sbjct: 130 MHESSVKPNSVTLVRALTACVKLGDFDTGWMIHRFIKDDFREMPLNLANALLNMYAKSGE 189

Query: 363 MNEAHRLFDQM 395
           M  A R FD M
Sbjct: 190 MEFAQRFFDNM 200



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 45/128 (35%), Positives = 73/128 (57%)
 Frame = +3

Query: 27  MIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLIP 206
           MI  ++K G +   R VF+ MP++  VSWN++++ Y E G +ED   LF  MV  S   P
Sbjct: 211 MISGFAKSGNMAFGRMVFNHMPERTTVSWNAMLSGYIENGLFEDGVSLFLEMVGASEK-P 269

Query: 207 NSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEMNEAHRLF 386
           + +T + +++ C +      G+ +H Y+ + GI   +NL N+L+ MY K G+M  A  LF
Sbjct: 270 DKVTFLNVLALCVRLEHLYMGRSIHGYMHKIGIEPRVNLINSLIEMYIKCGDMQCAKCLF 329

Query: 387 DQMWRSEE 410
           ++M    E
Sbjct: 330 ERMSEKNE 337


>ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325308|gb|EFH55728.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 583

 Score =  127 bits (320), Expect = 1e-27
 Identities = 58/130 (44%), Positives = 90/130 (69%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           D+YVQ A++  YSKCG +  ARQVFD+MP+K+VV+WNS+++ + + G  ED   +F+ M 
Sbjct: 141 DTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMR 200

Query: 186 EESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEM 365
           E  F  P+S T V ++SAC ++G    G WVHQYI+  G+ V + LG  L+N+Y++ G++
Sbjct: 201 ESGF-EPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDV 259

Query: 366 NEAHRLFDQM 395
            +A  +FD+M
Sbjct: 260 GKAREVFDKM 269



 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 44/131 (33%), Positives = 77/131 (58%), Gaps = 7/131 (5%)
 Frame = +3

Query: 24  AMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLI 203
           A+I +YS+CG + +AR+VFDKM + NV +W ++I+ Y   G  +    LF  M ++   I
Sbjct: 248 ALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSI 307

Query: 204 PNSITLVKMISACTKSGDFEAGKWVHQYILEN-----GI--RVCLNLGNTLMNMYAKMGE 362
           PN++T V ++SAC  +G  E G+ V++ + E+     G+   VC      +++M  + G 
Sbjct: 308 PNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVC------IVDMLGRAGF 361

Query: 363 MNEAHRLFDQM 395
           ++EA+R   Q+
Sbjct: 362 LDEAYRFIQQL 372


>ref|XP_006296191.1| hypothetical protein CARUB_v10025353mg [Capsella rubella]
           gi|482564899|gb|EOA29089.1| hypothetical protein
           CARUB_v10025353mg [Capsella rubella]
          Length = 579

 Score =  124 bits (310), Expect = 2e-26
 Identities = 58/130 (44%), Positives = 89/130 (68%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           D+YVQ A +  YSKCG L  ARQVFD MP+K++V+WNS+I+   + G  ED   +F+ M 
Sbjct: 137 DTYVQAAFVTFYSKCGDLRAARQVFDIMPEKSIVAWNSLISGLEQNGMAEDAIRVFYQM- 195

Query: 186 EESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEM 365
           +ES L P+S T V ++SAC ++G    G WVHQYI+  G+ + + LG  L+N+Y++ G++
Sbjct: 196 QESGLEPDSATFVSLLSACAQTGAISLGSWVHQYIVREGLDLNVKLGTALVNLYSRCGDV 255

Query: 366 NEAHRLFDQM 395
            ++  +FD+M
Sbjct: 256 GKSREVFDKM 265



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 41/126 (32%), Positives = 77/126 (61%), Gaps = 2/126 (1%)
 Frame = +3

Query: 24  AMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLI 203
           A++ +YS+CG + ++R+VFDKM + NV +W ++I+ Y   G  +    LF  M ++  L 
Sbjct: 244 ALVNLYSRCGDVGKSREVFDKMKETNVAAWTAMISAYGTHGYGKQAVELFNKMEDDCGLA 303

Query: 204 PNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGN--TLMNMYAKMGEMNEAH 377
           PN++T V ++SAC  +G  E G+ V++ + E G R+   + +   +++M  + G ++EA+
Sbjct: 304 PNNVTFVAVLSACAHAGLVEEGRSVYKRMTE-GYRLIPGVEHYVCIVDMLGRAGFLDEAY 362

Query: 378 RLFDQM 395
           R   Q+
Sbjct: 363 RFIHQL 368


>ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75101013|sp|P93011.1|PP182_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g33760 gi|1707020|gb|AAC69141.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253787|gb|AEC08881.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 583

 Score =  123 bits (308), Expect = 3e-26
 Identities = 54/130 (41%), Positives = 90/130 (69%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           D+YVQ A++  YSKCG +  ARQVFD+MP+K++V+WNS+++ + + G  ++   +F+ M 
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200

Query: 186 EESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEM 365
           E  F  P+S T V ++SAC ++G    G WVHQYI+  G+ + + LG  L+N+Y++ G++
Sbjct: 201 ESGFE-PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDV 259

Query: 366 NEAHRLFDQM 395
            +A  +FD+M
Sbjct: 260 GKAREVFDKM 269



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 44/131 (33%), Positives = 76/131 (58%), Gaps = 7/131 (5%)
 Frame = +3

Query: 24  AMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLI 203
           A+I +YS+CG + +AR+VFDKM + NV +W ++I+ Y   G  +    LF  M ++   I
Sbjct: 248 ALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPI 307

Query: 204 PNSITLVKMISACTKSGDFEAGKWVHQ-----YILENGI--RVCLNLGNTLMNMYAKMGE 362
           PN++T V ++SAC  +G  E G+ V++     Y L  G+   VC      +++M  + G 
Sbjct: 308 PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVC------MVDMLGRAGF 361

Query: 363 MNEAHRLFDQM 395
           ++EA++   Q+
Sbjct: 362 LDEAYKFIHQL 372


>ref|XP_006410519.1| hypothetical protein EUTSA_v10016424mg [Eutrema salsugineum]
           gi|557111688|gb|ESQ51972.1| hypothetical protein
           EUTSA_v10016424mg [Eutrema salsugineum]
          Length = 583

 Score =  122 bits (306), Expect = 5e-26
 Identities = 56/130 (43%), Positives = 89/130 (68%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           D+YVQ A +  YSKCG +  ARQVFDKMP+K++V+WNS+++   + G  E+   +F+ M 
Sbjct: 141 DTYVQAAFVTFYSKCGDMKAARQVFDKMPEKSIVAWNSLVSGLEQNGLAEEAIRVFYQMR 200

Query: 186 EESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEM 365
           E  F  P+S T V ++SAC ++G    G WVHQYI+ +G+ + + LG  L+N+Y++ G++
Sbjct: 201 ESGFE-PDSATFVGLLSACAQTGAIGLGSWVHQYIVRDGLGLNVKLGTALINLYSRCGDV 259

Query: 366 NEAHRLFDQM 395
            +A  +FD+M
Sbjct: 260 GKAREVFDKM 269



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/125 (33%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
 Frame = +3

Query: 24  AMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLI 203
           A+I +YS+CG + +AR+VFDKM + NV +W ++I+ Y   G  +    LF  M ++   I
Sbjct: 248 ALINLYSRCGDVGKAREVFDKMTETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDHGPI 307

Query: 204 PNSITLVKMISACTKSGDFEAGKWVHQYILEN-GIRVCLNLGNTLMNMYAKMGEMNEAHR 380
           PN +T V ++SAC  +G  E G+ V++ ++E+ G+   +     +++M  + G ++EA+R
Sbjct: 308 PNDVTFVAVLSACAHAGLVEEGRSVYKRLVESYGLIPRVEHHVCMVDMLGRAGFLDEAYR 367

Query: 381 LFDQM 395
              Q+
Sbjct: 368 FIHQL 372


>ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508818|gb|AES89960.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 871

 Score =  119 bits (298), Expect = 4e-25
 Identities = 57/130 (43%), Positives = 87/130 (66%)
 Frame = +3

Query: 3   ADSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLM 182
           ADS+V  +++  YSKCG+L +AR+VFD++PD++VVSW S+I  Y +    E+  +LF  M
Sbjct: 167 ADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRM 226

Query: 183 VEESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGE 362
             E FL  N  T+  +++ACTK G    GKWVH Y+++NGI +   L  +L+NMY K G+
Sbjct: 227 -REGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGD 285

Query: 363 MNEAHRLFDQ 392
           + +A  +FD+
Sbjct: 286 IGDARSVFDE 295



 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 51/131 (38%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           D+ ++N+++ MY+KCG + +A  VF    DK+VVSWNS+I+ YA+ G   +   LF  M 
Sbjct: 375 DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMR 434

Query: 186 EESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENG-IRVCLNLGNTLMNMYAKMGE 362
            ESFL P+++T+V ++SAC   G  + G  +H + L+ G +   + +G  L+N YAK G+
Sbjct: 435 MESFL-PDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGD 493

Query: 363 MNEAHRLFDQM 395
              A  +FD M
Sbjct: 494 ATSARMVFDGM 504



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 43/137 (31%), Positives = 76/137 (55%), Gaps = 10/137 (7%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMP------DKNVVSWNSIITCYAELGRWEDVKI 167
           +SY+  +++ MY KCG + +AR VFD+          ++V W ++I  Y + G  +    
Sbjct: 269 NSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALE 328

Query: 168 LF----WLMVEESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTL 335
           LF    W  +     +PNS+TL  ++SAC +  +   GK +H  +++ G+    +L N+L
Sbjct: 329 LFTDKKWYRI-----LPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLD-DTSLRNSL 382

Query: 336 MNMYAKMGEMNEAHRLF 386
           ++MYAK G + +AH +F
Sbjct: 383 VDMYAKCGLIPDAHYVF 399



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
 Frame = +3

Query: 12  YVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEE 191
           YV  A++  Y+KCG    AR VFD M +KN V+W ++I      G       LF  M++E
Sbjct: 479 YVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKE 538

Query: 192 SFLIPNSITLVKMISACTKSGDFEAGKWVHQYIL-ENGIRVCLNLGNTLMNMYAKMGEMN 368
             L+PN +    +++AC+ SG  E G  +  ++  E      +     ++++ A+ G + 
Sbjct: 539 E-LVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQ 597

Query: 369 EAHRLFDQM 395
           EA    D+M
Sbjct: 598 EALDFIDKM 606


>gb|EXB93905.1| hypothetical protein L484_002061 [Morus notabilis]
          Length = 705

 Score =  118 bits (295), Expect = 1e-24
 Identities = 58/136 (42%), Positives = 95/136 (69%), Gaps = 1/136 (0%)
 Frame = +3

Query: 3   ADSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLM 182
           ++++VQN +I MY+ CG++  AR VFDKMP ++V++WNSI+T Y +  RW++V  LF  M
Sbjct: 161 SNAFVQNTLIHMYASCGEIEIARNVFDKMPRRHVMTWNSILTGYVKNERWDEVVRLFREM 220

Query: 183 VEESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGI-RVCLNLGNTLMNMYAKMG 359
            E SF   + ITL+ +++AC ++GD E G+W+ +Y+  N + +  L L  +L++MY K G
Sbjct: 221 RESSFEF-DEITLISVLTACGRAGDLELGEWIGEYVEANELMKSKLALITSLIDMYGKCG 279

Query: 360 EMNEAHRLFDQMWRSE 407
           +++ A RLFDQ+ R +
Sbjct: 280 QVDTARRLFDQIDRRD 295



 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 46/124 (37%), Positives = 81/124 (65%)
 Frame = +3

Query: 24  AMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLI 203
           ++I MY KCGQ+  AR++FD++  ++VV+W+++I+ Y+   R  +   LF  M +E+ + 
Sbjct: 270 SLIDMYGKCGQVDTARRLFDQIDRRDVVAWSAMISGYSHGDRGREALDLFKEM-QEANVE 328

Query: 204 PNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEMNEAHRL 383
           PN +T+V ++ +C   G FE GKWV  YI +N +++ + LG  L++ YAK G +  +  +
Sbjct: 329 PNEVTMVSVLYSCAVLGAFETGKWVRFYIEKNKMKLTVILGTALIDFYAKCGSIEGSIEV 388

Query: 384 FDQM 395
           FD+M
Sbjct: 389 FDKM 392



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/125 (28%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
 Frame = +3

Query: 24  AMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLI 203
           A+I  Y+KCG +  + +VFDKMP +NV SW ++I   A  G+ +   + ++  ++E  + 
Sbjct: 371 ALIDFYAKCGSIEGSIEVFDKMPYRNVFSWTALIQGLASNGQGKKA-LKYFKQMQEKNVD 429

Query: 204 PNSITLVKMISACTKSGDFEAGKWVHQYILEN-GIRVCLNLGNTLMNMYAKMGEMNEAHR 380
           PN +T + ++SAC+ +G  E G+ +   +  + GI   +     ++++  + G + EA+ 
Sbjct: 430 PNDVTFIGVLSACSHAGLVEEGRKLFISMSNDYGIEPRIEHYGCMVDILGRSGLIQEAYE 489

Query: 381 LFDQM 395
               M
Sbjct: 490 FIKNM 494


>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  117 bits (293), Expect = 2e-24
 Identities = 54/130 (41%), Positives = 93/130 (71%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           D +V+ +++ +Y+KCG L +A +VFD +PDKNVVSW +II+ Y  +G++ +   +F  ++
Sbjct: 146 DVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLL 205

Query: 186 EESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEM 365
           E + L P+S T+V+++SACT+ GD  +G+W+H+ I+E G+   + +G +L++MYAK G M
Sbjct: 206 EMN-LAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNM 264

Query: 366 NEAHRLFDQM 395
            +A  +FD M
Sbjct: 265 EKARSVFDGM 274



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 48/128 (37%), Positives = 76/128 (59%)
 Frame = +3

Query: 12  YVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEE 191
           +V  +++ MY+KCG + +AR VFD MP+K++VSW ++I  YA  G  ++   LF  M  E
Sbjct: 249 FVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRE 308

Query: 192 SFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEMNE 371
           + + P+  T+V ++SAC + G  E G+WV   +  N       LG  L+++YAK G M+ 
Sbjct: 309 N-VKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSR 367

Query: 372 AHRLFDQM 395
           A  +F  M
Sbjct: 368 AWEVFKGM 375



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/130 (25%), Positives = 66/130 (50%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           D+Y+ N +++           R +F ++   N+  WN++I        ++D    + LM 
Sbjct: 45  DNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMR 104

Query: 186 EESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEM 365
            E FL PN+ T   ++ AC +  D + G  +H  +++ G    + +  +L+ +YAK G +
Sbjct: 105 SEGFL-PNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYL 163

Query: 366 NEAHRLFDQM 395
            +AH++FD +
Sbjct: 164 EDAHKVFDDI 173


>ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535508|gb|EEF37177.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  117 bits (293), Expect = 2e-24
 Identities = 56/136 (41%), Positives = 92/136 (67%)
 Frame = +3

Query: 3   ADSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLM 182
           AD +V+NA+I  YSKC  L  +R+VFD+M  ++VVSWNS+I+ Y++ G +ED K L+  M
Sbjct: 159 ADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDCKTLYREM 218

Query: 183 VEESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGE 362
           V+ S   PN +T+V ++ AC ++ D   G  VH++I++N + + +++ N L+ +YAK G 
Sbjct: 219 VDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGS 278

Query: 363 MNEAHRLFDQMWRSEE 410
           ++ A  LFD+M   +E
Sbjct: 279 LDYARELFDEMSEKDE 294



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 42/135 (31%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           ++Y+ + ++ +YSK   L  AR VFD++P KN  S+N+++  Y+   R  D   LF  + 
Sbjct: 58  ENYLASKLVALYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLHNRHGDALDLFSSLA 117

Query: 186 EESFLIPNSIT-LVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGE 362
             + +   SIT L+K +S+ T S D + GK VH ++L  G    + + N L+  Y+K  +
Sbjct: 118 SSNLVNNISITCLLKSLSSFTLS-DVKLGKEVHGFVLRTGFDADVFVENALITYYSKCYD 176

Query: 363 MNEAHRLFDQMWRSE 407
           ++ + ++FD+M + +
Sbjct: 177 LDLSRKVFDRMTKRD 191



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 31/160 (19%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVS------------------------- 110
           D  V NA+I +Y+KCG L  AR++FD+M +K+ V+                         
Sbjct: 262 DISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGMK 321

Query: 111 ------WNSIITCYAELGRWEDVKILFWLMVEESFLIPNSITLVKMISACTKSGDFEAGK 272
                 WN++IT   +  R E V  L   M    F  PN++TL  ++S        + GK
Sbjct: 322 TQILSTWNAVITGLVQNNRHEGVLDLVREMQALGFR-PNAVTLSSVLSTIAYFSSLKGGK 380

Query: 273 WVHQYILENGIRVCLNLGNTLMNMYAKMGEMNEAHRLFDQ 392
            +H Y ++ G    + +   +++MYAK G +  A R+FDQ
Sbjct: 381 EIHSYAIKIGYHRNIYVATAIIDMYAKSGYLRGAQRVFDQ 420


>ref|XP_007016122.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508786485|gb|EOY33741.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 733

 Score =  117 bits (292), Expect = 2e-24
 Identities = 62/131 (47%), Positives = 84/131 (64%)
 Frame = +3

Query: 3   ADSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLM 182
           AD ++ N++I +Y  CG L  A +VF  + +K+VVSWNS+IT  A+ G  E    LF  M
Sbjct: 159 ADVFISNSLIHLYLSCGDLDSAYRVFMMIGEKDVVSWNSLITGLAQKGCAEKALELFRRM 218

Query: 183 VEESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGE 362
             ES + PN +T+V ++SACTK  D E G+WV  YI  NGI V L L N +++MYAK G 
Sbjct: 219 DAES-VKPNDVTMVGVLSACTKKLDLEFGRWVCSYIERNGISVNLTLSNAMLDMYAKCGS 277

Query: 363 MNEAHRLFDQM 395
           + +A RLFD M
Sbjct: 278 LEDAKRLFDMM 288



 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 47/162 (29%), Positives = 87/162 (53%), Gaps = 31/162 (19%)
 Frame = +3

Query: 15  VQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEES 194
           + NAM+ MY+KCG L +A+++FD M +K++V+W +++  YA+LG +E  + +  +M  + 
Sbjct: 264 LSNAMLDMYAKCGSLEDAKRLFDMMEEKDIVTWTTMLDGYAKLGEYEAARRVLDIMPRQD 323

Query: 195 FLI-------------------------------PNSITLVKMISACTKSGDFEAGKWVH 281
                                             P+ ITLV  +SAC + G  + G+ +H
Sbjct: 324 IAAWNALISGYEQNGKPKEALAIYHELKLSKIAKPDEITLVSTLSACAQLGAMDIGRGIH 383

Query: 282 QYILENGIRVCLNLGNTLMNMYAKMGEMNEAHRLFDQMWRSE 407
            Y+ E GI++  +L  +L++MY+K G++N+A  +F  + R +
Sbjct: 384 AYVKEQGIQLNCHLTTSLIDMYSKCGDVNKALEVFYSVERRD 425



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/107 (28%), Positives = 60/107 (56%)
 Frame = +3

Query: 66  ARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLIPNSITLVKMISACT 245
           AR+VFD++P  N+ +WN++I  YA         ++F  MV+ES   PN  T   +I A  
Sbjct: 78  ARKVFDQIPKPNLYTWNTLIRVYASGPEPLQGILIFLRMVDESPYYPNKFTFPFVIKAAA 137

Query: 246 KSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEMNEAHRLF 386
           +      G+ +H  +++  +   + + N+L+++Y   G+++ A+R+F
Sbjct: 138 EIVSVCVGQALHGMVIKASLGADVFISNSLIHLYLSCGDLDSAYRVF 184


>ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Solanum lycopersicum]
          Length = 688

 Score =  116 bits (291), Expect = 3e-24
 Identities = 56/130 (43%), Positives = 89/130 (68%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           D +V+  ++  Y++CG L +A Q+FD +P+KNVVSW +IIT Y + G++++   LF   +
Sbjct: 147 DVFVKTGLVCFYARCGFLDDAHQMFDDIPEKNVVSWTAIITGYIDFGKFKEAIDLFRRSL 206

Query: 186 EESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEM 365
           E   L P+S TLV+++SAC++ GD  AG+W+H Y +E GI   + +   L++MYAK GEM
Sbjct: 207 EMG-LSPDSFTLVRVLSACSRVGDVSAGEWIHGYAVEMGIGRNVFVNTGLVDMYAKCGEM 265

Query: 366 NEAHRLFDQM 395
            +A  +FD+M
Sbjct: 266 AKAREVFDEM 275



 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 47/128 (36%), Positives = 80/128 (62%)
 Frame = +3

Query: 12  YVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEE 191
           +V   ++ MY+KCG++ +AR+VFD+M +K+VVSW+++I  YA  G  ++   +F+ M  E
Sbjct: 250 FVNTGLVDMYAKCGEMAKAREVFDEMVEKDVVSWSAMIQGYAVNGLPKEALEVFYTMQRE 309

Query: 192 SFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEMNE 371
           + + P+  ++V ++SAC++ G  E G+W  + +  N       LG  L++MYAK G M  
Sbjct: 310 N-VRPDCYSMVGVLSACSRLGALEVGEWASKLMDMNEFLSNAVLGTALIDMYAKCGRMVS 368

Query: 372 AHRLFDQM 395
           A  +F QM
Sbjct: 369 AWEIFKQM 376



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
 Frame = +3

Query: 3   ADSYVQNAMIQMYSKCGQLFEARQVFDKM-PDKNVVSWNSIITCYAELGRWEDVKILFWL 179
           +++ +  A+I MY+KCG++  A ++F +M   K+ V WN++++  A  G  +     F  
Sbjct: 348 SNAVLGTALIDMYAKCGRMVSAWEIFKQMLVKKDRVIWNAVLSGLAMHGYVKSAFCCF-S 406

Query: 180 MVEESFLIPNSITLVKMISACTKSGDFEAGK-----WVHQYILENGIRVCLNLGNTLMNM 344
            VE+  + PN  T + ++ ACT +G  + G+       H Y LE  I         ++++
Sbjct: 407 QVEKLGIKPNGNTFIGLLCACTHAGLVDEGRKYFQSMTHLYSLEPSIEHY----GCMVDL 462

Query: 345 YAKMGEMNEAHRLFDQM 395
             + G ++EAH L + M
Sbjct: 463 LGRAGLLDEAHSLIESM 479


>gb|EYU45383.1| hypothetical protein MIMGU_mgv1a023657mg [Mimulus guttatus]
          Length = 701

 Score =  115 bits (289), Expect = 5e-24
 Identities = 59/136 (43%), Positives = 87/136 (63%)
 Frame = +3

Query: 3   ADSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLM 182
           +D +V N +I  YS+CG L  AR+VF  M +++VVSWN+++   A+ G  ++    F  M
Sbjct: 156 SDLFVSNCLIYFYSECGCLDMARRVFSSMSERDVVSWNTMVNGLAQNGYVDEAVECFHRM 215

Query: 183 VEESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGE 362
            EE  L PN +T+V ++SAC K  D + G+WVH YI  N IR+ L L N +++MY K G 
Sbjct: 216 EEEG-LKPNDVTMVGVLSACGKKSDVKFGRWVHSYIETNRIRLSLILCNAILDMYTKCGS 274

Query: 363 MNEAHRLFDQMWRSEE 410
           M +A +LFD+M  S+E
Sbjct: 275 MKDAKKLFDKMLPSKE 290



 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 43/127 (33%), Positives = 82/127 (64%), Gaps = 2/127 (1%)
 Frame = +3

Query: 21  NAMIQMYSKCGQLFEARQVFDKM-PDK-NVVSWNSIITCYAELGRWEDVKILFWLMVEES 194
           NA++ MY+KCG + +A+++FDKM P K ++ +WN++I+ Y + G   +   +F  +    
Sbjct: 263 NAILDMYTKCGSMKDAKKLFDKMLPSKEDIATWNALISAYEQSGNPNEAIAIFNELQLSK 322

Query: 195 FLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEMNEA 374
              P+ +TLV  +SAC++ G  E G W+H Y+ + G+R+  +L   L++MY+K G++++A
Sbjct: 323 ASKPDEVTLVSTLSACSQLGATEFGSWIHVYMKKEGMRLNRHLVTALVDMYSKCGDLHKA 382

Query: 375 HRLFDQM 395
             +F+ +
Sbjct: 383 LEIFNSV 389



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
 Frame = +3

Query: 6   DSYVQNAMIQMY--SKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWL 179
           D +  + ++Q Y  S+   L  A +VFD++P  N+ SWN +I   A   +  +  ++F  
Sbjct: 53  DPFSASKLVQSYALSELSSLHYAYKVFDQIPQPNLYSWNILIRASASSPQPINCLLMFIR 112

Query: 180 MVEESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMG 359
           ++      PN  T   +I A  K  DF+ GK +H  +++ G    L + N L+  Y++ G
Sbjct: 113 LLHVGGEKPNKFTYPFVIKASAKLDDFQLGKGIHGMVIKEGFSSDLFVSNCLIYFYSECG 172

Query: 360 EMNEAHRLFDQM 395
            ++ A R+F  M
Sbjct: 173 CLDMARRVFSSM 184



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/87 (33%), Positives = 54/87 (62%)
 Frame = +3

Query: 12  YVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEE 191
           ++  A++ MYSKCG L +A ++F+ +  ++V  W+++I      GR  D   LF L ++E
Sbjct: 364 HLVTALVDMYSKCGDLHKALEIFNSVDKRDVFVWSAMIAGLGMHGRGGDAIKLF-LKMQE 422

Query: 192 SFLIPNSITLVKMISACTKSGDFEAGK 272
           + + P+S+T   +++AC+ SG  E G+
Sbjct: 423 AKVRPSSVTFTNLLAACSHSGLVEEGR 449


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  115 bits (289), Expect = 5e-24
 Identities = 58/131 (44%), Positives = 84/131 (64%)
 Frame = +3

Query: 3   ADSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLM 182
           +D ++ N++I  Y+KCG+L    +VF  +P ++VVSWNS+IT + + G  E+   LF  M
Sbjct: 169 SDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEM 228

Query: 183 VEESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGE 362
            E   + PN IT+V ++SAC K  DFE G+WVH YI  N I   L L N +++MY K G 
Sbjct: 229 -ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGS 287

Query: 363 MNEAHRLFDQM 395
           + +A RLFD+M
Sbjct: 288 VEDAKRLFDKM 298



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 31/162 (19%)
 Frame = +3

Query: 15  VQNAMIQMYSKCGQLFEARQVFDKMPDKNV------------------------------ 104
           + NAM+ MY+KCG + +A+++FDKMP+K++                              
Sbjct: 274 LSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQD 333

Query: 105 -VSWNSIITCYAELGRWEDVKILFWLMVEESFLIPNSITLVKMISACTKSGDFEAGKWVH 281
             +WN++I+ Y + G+ ++   LF  +       P+ +TLV  +SAC + G  + G W+H
Sbjct: 334 IAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIH 393

Query: 282 QYILENGIRVCLNLGNTLMNMYAKMGEMNEAHRLFDQMWRSE 407
            YI + G+++  +L  +L++MY K G++ +A  +F  + R +
Sbjct: 394 VYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKD 435



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/107 (28%), Positives = 59/107 (55%)
 Frame = +3

Query: 66  ARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLIPNSITLVKMISACT 245
           A+QVFD++P  N+ +WN++I  YA         ++F  M+ +S   P+  T   +I A +
Sbjct: 88  AQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147

Query: 246 KSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEMNEAHRLF 386
           +  +   GK  H  +++  +   + + N+L++ YAK GE+   +R+F
Sbjct: 148 ELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVF 194



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/129 (28%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
 Frame = +3

Query: 12  YVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEE 191
           ++  ++I MY KCG L +A  VF  +  K+V  W+++I   A  G  +D   LF  M E+
Sbjct: 406 HLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQED 465

Query: 192 SFLIPNSITLVKMISACTKSGDFEAGK-WVHQYILENGIRVCLNLGNTLMNMYAKMGEMN 368
             + PN++T   ++ AC+  G  E G+ + +Q  L  G+   +     ++++  + G + 
Sbjct: 466 K-VKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLE 524

Query: 369 EAHRLFDQM 395
           EA  L ++M
Sbjct: 525 EAVELIEKM 533


>ref|XP_007025629.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508780995|gb|EOY28251.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 905

 Score =  115 bits (288), Expect = 6e-24
 Identities = 59/130 (45%), Positives = 87/130 (66%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           DSYVQ A++  Y+K G L  AR+VFDKMP+K VV+WNS+I+ Y + G  ++   LF+LM 
Sbjct: 465 DSYVQAALVSFYAKSGDLGVARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVGLFYLM- 523

Query: 186 EESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEM 365
           ++S + P+S T V ++SAC + G    G WVH+YI+ N   V + LG  L+NMY++ G +
Sbjct: 524 QDSGVKPDSTTFVCLLSACAQLGAAGLGCWVHEYIVRNCFDVNVVLGTALINMYSRCGNV 583

Query: 366 NEAHRLFDQM 395
           ++A   FD M
Sbjct: 584 SKAREAFDSM 593



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
 Frame = +3

Query: 24  AMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLI 203
           A+I MYS+CG + +AR+ FD M +KNVV+W ++I+ Y   G       LF  M       
Sbjct: 572 ALINMYSRCGNVSKAREAFDSMEEKNVVAWTAMISGYGMHGHGSQAIELFSEMRVHG-PR 630

Query: 204 PNSITLVKMISACTKSGDFEAGKWVHQYILEN-GIRVCLNLGNTLMNMYAKMGEMNEAHR 380
           PN++T V ++SAC  +G    G+ +   + +  G+   +     +++M  + G ++EA++
Sbjct: 631 PNNVTFVAILSACAHAGLVNEGRQIFASMRQQYGLVPSVEHHVCVVDMLGRAGHLHEAYQ 690


>ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cicer arietinum]
          Length = 1334

 Score =  115 bits (288), Expect = 6e-24
 Identities = 54/129 (41%), Positives = 85/129 (65%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           DS+V  +++  YSKCG+L  AR+VFD++PD+ +VSW S+I  Y +    E+  +LF  M 
Sbjct: 164 DSFVLTSLVDAYSKCGELHYARKVFDEIPDRTIVSWTSMIVAYVQNDCAEEGLMLFNRM- 222

Query: 186 EESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEM 365
            E F+  N  T+  +++ACTK G    GKWVH Y+++NGI++   L  +L+NMY K G++
Sbjct: 223 REGFVDGNLFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIQINSFLATSLLNMYVKCGDI 282

Query: 366 NEAHRLFDQ 392
            +A  +FD+
Sbjct: 283 GDARYVFDE 291



 Score =  103 bits (256), Expect = 3e-20
 Identities = 54/128 (42%), Positives = 81/128 (63%), Gaps = 1/128 (0%)
 Frame = +3

Query: 15  VQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEES 194
           ++NA++ MY+KCG  F+AR VF+   DK+VVSWNS+I+ YA+ G   +   LF  M  ES
Sbjct: 373 LRNALVDMYAKCGLSFDARYVFETTVDKDVVSWNSVISGYAQSGSAYEALDLFHRMRLES 432

Query: 195 FLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVC-LNLGNTLMNMYAKMGEMNE 371
           F  P+++T+V ++SAC   G  + G  +H +  + G+  C + +G  L+N YAK GE N 
Sbjct: 433 F-SPDAVTVVGVLSACASVGALQIGSSLHAFAFKYGLVSCSIYVGTALLNFYAKCGEANL 491

Query: 372 AHRLFDQM 395
           A  +FD M
Sbjct: 492 ARMVFDTM 499



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 42/132 (31%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
 Frame = +3

Query: 15   VQNAMIQMYSKCGQLFEARQVFDKMP---DKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
            V   ++ ++ K G + ++R+ F+++     + VV WN++I+ Y + G   +   LF  MV
Sbjct: 976  VNTVLVFLFGKWGNVEKSREKFEQISAAGKRGVVPWNAMISAYVQNGCPLEGLNLFRAMV 1035

Query: 186  EESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLN----LGNTLMNMYAK 353
            EE    PN IT+V ++SAC + GD   G WVH+Y++  G +  +     L  +L++MY+K
Sbjct: 1036 EEQTSRPNHITMVSVLSACAQIGDLSLGCWVHEYLISIGHKGTIGSNQILATSLIDMYSK 1095

Query: 354  MGEMNEAHRLFD 389
             G ++ A  +F+
Sbjct: 1096 CGSLDRAKEVFE 1107



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 46/141 (32%), Positives = 82/141 (58%), Gaps = 10/141 (7%)
 Frame = +3

Query: 3    ADSYVQNAMIQMYSK-CGQLFEARQVFDKMPDKNVVS-WNSIITCYAELGRWEDVKILFW 176
            +D++V N ++ +Y+K    L  AR+VFD++PDK+ VS W S+IT YA+ G+ E+V  +F 
Sbjct: 863  SDTFVTNGLVAVYAKGFNNLVSARKVFDEIPDKSAVSCWTSLITGYAQSGQSEEVLQVFH 922

Query: 177  LMVEESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNT-------- 332
             M+ ++ + P + T+V ++SAC+     +  KWV  YIL   I   ++   T        
Sbjct: 923  AMIRQN-MCPQNDTMVSVLSACSSLQIPKIEKWV--YILSELIDDSISARETWHDSVNTV 979

Query: 333  LMNMYAKMGEMNEAHRLFDQM 395
            L+ ++ K G + ++   F+Q+
Sbjct: 980  LVFLFGKWGNVEKSREKFEQI 1000



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 9/137 (6%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMP-----DKNVVSWNSIITCYAELGRWEDVKIL 170
           +S++  +++ MY KCG + +AR VFD+       D ++V W ++I  Y + G  +    L
Sbjct: 265 NSFLATSLLNMYVKCGDIGDARYVFDEFSISNFDDDDLVFWTAMIVGYTQRGYPQAALEL 324

Query: 171 F----WLMVEESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLM 338
           F    W  +     +PNS+TL  ++SAC +  +   GK +H  +++ G+    +L N L+
Sbjct: 325 FTDKKWYRI-----LPNSVTLASLLSACAQLENIVMGKSLHVLVVKYGLD-GTSLRNALV 378

Query: 339 NMYAKMGEMNEAHRLFD 389
           +MYAK G   +A  +F+
Sbjct: 379 DMYAKCGLSFDARYVFE 395



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
 Frame = +3

Query: 12  YVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEE 191
           YV  A++  Y+KCG+   AR VFD M +KN V+W+++I      G       LF  M++E
Sbjct: 474 YVGTALLNFYAKCGEANLARMVFDTMGEKNAVTWSAMIGGCGMQGDGVGSLALFRDMLKE 533

Query: 192 SFLIPNSITLVKMISACTKSGDFEAGKWVHQYIL-ENGIRVCLNLGNTLMNMYAKMGEMN 368
             L+PN +    +++AC+ SG    G  +  ++  E      +     ++++ A+ G + 
Sbjct: 534 K-LVPNEVVFTTILAACSHSGMVGEGLRLFDFMCKELNFVPSMKHYACMVDLLARAGNLK 592

Query: 369 EAHRLFDQM 395
           EA    D+M
Sbjct: 593 EALDFIDKM 601



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/90 (38%), Positives = 53/90 (58%)
 Frame = +3

Query: 3    ADSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLM 182
            ++  +  ++I MYSKCG L  A++VF+    K+VV +N++I   A  G  ED   LF+ M
Sbjct: 1081 SNQILATSLIDMYSKCGSLDRAKEVFEHAISKDVVLFNAMIMGLAVNGEGEDALRLFYKM 1140

Query: 183  VEESFLIPNSITLVKMISACTKSGDFEAGK 272
             E   L PN+ T +  +SAC+ SG  E G+
Sbjct: 1141 TEYG-LQPNAGTFLGALSACSHSGLLEKGR 1169


>ref|XP_002532091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528238|gb|EEF30293.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 446

 Score =  115 bits (288), Expect = 6e-24
 Identities = 55/135 (40%), Positives = 87/135 (64%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           +SY  +A+I MY KCG L  AR+VFD M +K++V+WN++IT YA+ G  ++   LF +M 
Sbjct: 262 NSYTASALIDMYGKCGDLMSARRVFDNMAEKDIVTWNAMITGYAQNGASDEAMTLFNVM- 320

Query: 186 EESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEM 365
            E+ + PN IT+V ++SAC   G  + GKWV  Y  + G++  + + + L++MYAK G +
Sbjct: 321 REAGITPNEITMVVVLSACASIGALDLGKWVEMYASQRGLQHDVYVASALVDMYAKCGSL 380

Query: 366 NEAHRLFDQMWRSEE 410
           + A R+F+ M    E
Sbjct: 381 DNALRVFENMPHKNE 395



 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 49/130 (37%), Positives = 81/130 (62%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           DS++ +++I MY+KC +L  AR+VFD++ ++++VSWNS+I+ Y ++G   +   LF  M 
Sbjct: 161 DSHINHSLITMYAKCSKLDSARKVFDEILERDIVSWNSMISGYTKMGFAREAVRLFMEMR 220

Query: 186 EESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEM 365
           E+ F  P  +TLV ++ AC   GD   GKWV   I +  + +     + L++MY K G++
Sbjct: 221 EQGF-EPVEMTLVSILGACGDLGDLALGKWVEALIGDKKMELNSYTASALIDMYGKCGDL 279

Query: 366 NEAHRLFDQM 395
             A R+FD M
Sbjct: 280 MSARRVFDNM 289



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/79 (44%), Positives = 50/79 (63%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           D YV +A++ MY+KCG L  A +VF+ MP KN VSWN++I+  A  GR  +   LF  M+
Sbjct: 363 DVYVASALVDMYAKCGSLDNALRVFENMPHKNEVSWNAMISALAFHGRAREALSLFSRML 422

Query: 186 EESFLIPNSITLVKMISAC 242
             S + PN IT + + +AC
Sbjct: 423 NGSTVRPNDITFIGVFAAC 441


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score =  115 bits (288), Expect = 6e-24
 Identities = 58/131 (44%), Positives = 83/131 (63%)
 Frame = +3

Query: 3   ADSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLM 182
           +D ++ N++I  Y+KCG+L    +VF   P ++VVSWNS+IT + + G  E+   LF  M
Sbjct: 169 SDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEM 228

Query: 183 VEESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGE 362
            E   + PN IT+V ++SAC K  DFE G+WVH YI  N I   L L N +++MY K G 
Sbjct: 229 -ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGS 287

Query: 363 MNEAHRLFDQM 395
           + +A RLFD+M
Sbjct: 288 VEDAKRLFDKM 298



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 39/139 (28%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
 Frame = +3

Query: 15  VQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVK---------- 164
           + NAM+ MY+KCG + +A+++FDKMP+K++VSW +++  YA++G ++  +          
Sbjct: 274 LSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKD 333

Query: 165 -ILFWLMVEESFLIPNSITLVKMISACTKSGDFEAGK-WVHQYILENGIRVCLNLGNTLM 338
            I  +  ++E  + PN++T   ++ AC+  G  E G+ + +Q  L  G+   +     ++
Sbjct: 334 AIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMV 393

Query: 339 NMYAKMGEMNEAHRLFDQM 395
           ++  + G + EA  L ++M
Sbjct: 394 DILGRAGLLEEAVELIEKM 412



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/107 (28%), Positives = 59/107 (55%)
 Frame = +3

Query: 66  ARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLIPNSITLVKMISACT 245
           A+QVFD++P  N+ +WN++I  YA         ++F  M+ +S   P+  T   +I A +
Sbjct: 88  AQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147

Query: 246 KSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEMNEAHRLF 386
           +  +   GK  H  +++  +   + + N+L++ YAK GE+   +R+F
Sbjct: 148 ELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVF 194


>ref|XP_007023277.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508778643|gb|EOY25899.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 723

 Score =  115 bits (287), Expect = 8e-24
 Identities = 60/128 (46%), Positives = 86/128 (67%)
 Frame = +3

Query: 12  YVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEE 191
           +VQNA+I MYS CGQ+  AR VFD    ++V++WN IIT Y  + ++++   LF  M E 
Sbjct: 154 FVQNALIHMYSLCGQMEMARAVFDVSCKRDVITWNVIITGYNRMKQYDETNKLFDEM-ER 212

Query: 192 SFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEMNE 371
           + ++P S+TLV ++SAC+K  D E GK VH+YI +  +   L L N LM+MYA  GEM+ 
Sbjct: 213 NGMVPTSVTLVSLLSACSKLKDLEVGKRVHKYIQKCKVESNLTLENALMDMYAACGEMDV 272

Query: 372 AHRLFDQM 395
           A R+FD+M
Sbjct: 273 AVRIFDRM 280



 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 31/162 (19%)
 Frame = +3

Query: 15  VQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEES 194
           ++NA++ MY+ CG++  A ++FD+M  K+V+SW +I++ +   G  +  +  F  M E  
Sbjct: 256 LENALMDMYAACGEMDVAVRIFDRMKTKDVISWTTIVSGFVNKGEIDLARDYFDRMPERD 315

Query: 195 FLI------------------------------PNSITLVKMISACTKSGDFEAGKWVHQ 284
           ++                               P+  T+V +++AC + G  + G+W+  
Sbjct: 316 YVSWTAMIDGYLRVNCFKEALVLFREMQALNIRPDEFTMVSILTACAQLGALQIGEWIKT 375

Query: 285 YILENGIRVCLNLGNTLMNMYAKMGEMNEAHRLFDQM-WRSE 407
           YI  N ++  + +GN L++MY K G + +A R+F+ M WR +
Sbjct: 376 YIERNKVKNDVFVGNALIDMYFKCGSIEKAQRVFNGMPWRDK 417



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 37/131 (28%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
 Frame = +3

Query: 6   DSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMV 185
           D +V NA+I MY KCG + +A++VF+ MP ++  +W ++I   A  G  E+   +F  M+
Sbjct: 385 DVFVGNALIDMYFKCGSIEKAQRVFNGMPWRDKFTWTAMIFGLAINGHGEEALGMFSEML 444

Query: 186 EESFLIPNSITLVKMISACTKSGDFEAG-KWVHQYILENGIRVCLNLGNTLMNMYAKMGE 362
             S + P+ +T + ++ ACT +G  + G K+      E+G++  +     ++++  + G 
Sbjct: 445 RAS-IKPDEVTYIGVLCACTHAGMVDEGRKFFASMTTEHGVQPNVAHYGCMVDLLGRAGH 503

Query: 363 MNEAHRLFDQM 395
           + EA  +   M
Sbjct: 504 LQEACEVIKNM 514


>ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  115 bits (287), Expect = 8e-24
 Identities = 54/132 (40%), Positives = 89/132 (67%)
 Frame = +3

Query: 12  YVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEE 191
           +V+N +I MY+ CG++  AR+VFD+M ++NV +WNS+   Y + G WE+V  LF  M+E 
Sbjct: 160 FVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLEL 219

Query: 192 SFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEMNE 371
                + +TLV +++AC +  D E G+W+++Y+ E G++    L  +L++MYAK G+++ 
Sbjct: 220 DIRF-DEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDT 278

Query: 372 AHRLFDQMWRSE 407
           A RLFDQM R +
Sbjct: 279 ARRLFDQMDRRD 290



 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 45/124 (36%), Positives = 82/124 (66%)
 Frame = +3

Query: 24  AMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLI 203
           +++ MY+KCGQ+  AR++FD+M  ++VV+W+++I+ Y++  R  +   LF  M +++ + 
Sbjct: 265 SLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEM-QKANID 323

Query: 204 PNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGEMNEAHRL 383
           PN IT+V ++S+C   G  E GKWVH +I +  +++ + LG  LM+ YAK G +  +  +
Sbjct: 324 PNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEV 383

Query: 384 FDQM 395
           F +M
Sbjct: 384 FGKM 387



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 36/125 (28%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
 Frame = +3

Query: 24  AMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLI 203
           A++  Y+KCG +  + +VF KMP KNV+SW  +I   A  G+ +     F+LM+E++ + 
Sbjct: 366 ALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKN-VE 424

Query: 204 PNSITLVKMISACTKSGDFEAGKWVHQYILEN-GIRVCLNLGNTLMNMYAKMGEMNEAHR 380
           PN +T + ++SAC+ +G  + G+ +   +  + GI   +     ++++  + G + EA +
Sbjct: 425 PNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQ 484

Query: 381 LFDQM 395
               M
Sbjct: 485 FIKNM 489


>ref|XP_002305798.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550340302|gb|EEE86309.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 591

 Score =  114 bits (284), Expect = 2e-23
 Identities = 58/131 (44%), Positives = 86/131 (65%)
 Frame = +3

Query: 3   ADSYVQNAMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLM 182
           +D YVQ A++  Y KCG L  AR+VFDKM D++VV+WNS+I+ Y + G  ++   LF  M
Sbjct: 144 SDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRM 203

Query: 183 VEESFLIPNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGNTLMNMYAKMGE 362
            +E  + PNS T V ++SAC   G F  G WVH+Y + NG+ + + LG +L+NMY + G 
Sbjct: 204 -KEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGN 262

Query: 363 MNEAHRLFDQM 395
           +++A  +FD M
Sbjct: 263 VSKAREVFDSM 273



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
 Frame = +3

Query: 24  AMIQMYSKCGQLFEARQVFDKMPDKNVVSWNSIITCYAELGRWEDVKILFWLMVEESFLI 203
           ++I MY++CG + +AR+VFD M ++NVV+W ++I+ Y   G       LF  M   + L+
Sbjct: 252 SLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEM-RRNGLL 310

Query: 204 PNSITLVKMISACTKSGDFEAGKWVHQYILENGIRVCLNLGN--TLMNMYAKMGEMNEAH 377
           PNSIT V ++SAC  +G    G+ V + + E   R+   + +   L++M  + G ++EA+
Sbjct: 311 PNSITFVAVLSACAHAGLVNEGRRVFESMREE-YRLVPEVEHHVCLVDMLGRAGLLDEAY 369

Query: 378 RLFDQM 395
               ++
Sbjct: 370 NFIKEI 375