BLASTX nr result
ID: Papaver27_contig00053454
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00053454
(756 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006368854.1| hypothetical protein POPTR_0001s13120g [Popu... 48 1e-09
ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi... 48 8e-09
ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi... 50 2e-08
ref|XP_007157083.1| hypothetical protein PHAVU_002G041500g [Phas... 47 1e-07
emb|CBI35666.3| unnamed protein product [Vitis vinifera] 47 2e-07
emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera] 46 4e-07
ref|XP_006399818.1| hypothetical protein EUTSA_v10012768mg [Eutr... 42 3e-06
ref|XP_007043814.1| Pentatricopeptide repeat (PPR) superfamily p... 44 5e-06
>ref|XP_006368854.1| hypothetical protein POPTR_0001s13120g [Populus trichocarpa]
gi|550347141|gb|ERP65423.1| hypothetical protein
POPTR_0001s13120g [Populus trichocarpa]
Length = 655
Score = 48.1 bits (113), Expect(3) = 1e-09
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +2
Query: 293 ARAGNLEDTLESM-TMPFEPNIVSWQSLLGLGGCWSYRNEKIEKTASGSL 439
+RAG L++ LE + +MPF P+ +SW+ LLG GCW+YRN +I + A+ +L
Sbjct: 432 SRAGFLQEALELIRSMPFSPDAMSWKCLLG--GCWTYRNLEIGELAAENL 479
Score = 33.9 bits (76), Expect(3) = 1e-09
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 159 FMVRMHMCSHSGLVLQARQYLDSTKS 236
F+ + CSHSGLV++ RQYL+S S
Sbjct: 388 FIAVLTACSHSGLVIEGRQYLESMSS 413
Score = 26.6 bits (57), Expect(3) = 1e-09
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 238 NFVVDATIEHHNCMIDI 288
N+ V TI+H++CM+DI
Sbjct: 414 NYGVATTIDHYDCMVDI 430
>ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 48.1 bits (113), Expect(3) = 8e-09
Identities = 25/50 (50%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +2
Query: 293 ARAGNLEDTLESM-TMPFEPNIVSWQSLLGLGGCWSYRNEKIEKTASGSL 439
+RAG L + LE + +MPFEP+++SW+SL LGGCWS RN +I A+ ++
Sbjct: 530 SRAGLLLEALEVIRSMPFEPDVMSWKSL--LGGCWSRRNLEIGMIAADNI 577
Score = 30.4 bits (67), Expect(3) = 8e-09
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 159 FMVRMHMCSHSGLVLQARQYLDS 227
F+ ++ CSHSGLV + +Q+LDS
Sbjct: 486 FIGLLNACSHSGLVKEGKQFLDS 508
Score = 27.3 bits (59), Expect(3) = 8e-09
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1
Query: 247 VDATIEHHNCMIDI 288
V+ TI+H+NCMIDI
Sbjct: 515 VNPTIDHYNCMIDI 528
>ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 50.4 bits (119), Expect(3) = 2e-08
Identities = 24/50 (48%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = +2
Query: 293 ARAGNLEDTLESM-TMPFEPNIVSWQSLLGLGGCWSYRNEKIEKTASGSL 439
+RAG L++ LE + ++PFEP+++SW+SL LGGCWS+RN +I A+ ++
Sbjct: 542 SRAGLLQEALEVIRSLPFEPDVMSWKSL--LGGCWSHRNLEIGMIAADNI 589
Score = 27.3 bits (59), Expect(3) = 2e-08
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 159 FMVRMHMCSHSGLVLQARQYLDS 227
F+ ++ CSHSGLV + ++ LDS
Sbjct: 498 FIGLLNACSHSGLVKEGKKILDS 520
Score = 26.9 bits (58), Expect(3) = 2e-08
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1
Query: 247 VDATIEHHNCMIDI 288
V+ TI+H+NCMID+
Sbjct: 527 VNPTIDHYNCMIDV 540
>ref|XP_007157083.1| hypothetical protein PHAVU_002G041500g [Phaseolus vulgaris]
gi|561030498|gb|ESW29077.1| hypothetical protein
PHAVU_002G041500g [Phaseolus vulgaris]
Length = 765
Score = 46.6 bits (109), Expect(3) = 1e-07
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +2
Query: 293 ARAGNLEDTLESM-TMPFEPNIVSWQSLLGLGGCWSYRNEKIEKTASGSL 439
+RAG L++ E + ++P EP+++SW+SL LGGCWS+RN +I A+ ++
Sbjct: 542 SRAGMLQEAREMIRSLPLEPDVLSWKSL--LGGCWSHRNLEIGMIAADNI 589
Score = 30.4 bits (67), Expect(3) = 1e-07
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 159 FMVRMHMCSHSGLVLQARQYLDS 227
F+ ++ CSHSGLV + +Q+LDS
Sbjct: 498 FIGLLNACSHSGLVKEGKQFLDS 520
Score = 25.0 bits (53), Expect(3) = 1e-07
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 247 VDATIEHHNCMIDI 288
V+ I+H+NCMIDI
Sbjct: 527 VNPIIDHYNCMIDI 540
>emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 47.0 bits (110), Expect(3) = 2e-07
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +2
Query: 293 ARAGNLEDTLESMT-MPFEPNIVSWQSLLGLGGCWSYRNEKIEKTASGSL 439
+RAG L++ LE + MPFEP+ +SW+SL LGGCW++ + K+ K A+ +L
Sbjct: 538 SRAGLLQEALELINRMPFEPDAMSWKSL--LGGCWAHCDLKLGKIAAENL 585
Score = 30.8 bits (68), Expect(3) = 2e-07
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 159 FMVRMHMCSHSGLVLQARQYLDS 227
F+ + CSHSGLV +A+QYL S
Sbjct: 494 FIAVLTACSHSGLVAEAKQYLGS 516
Score = 23.5 bits (49), Expect(3) = 2e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 238 NFVVDATIEHHNCMID 285
++ V TI+H++CMID
Sbjct: 520 DYGVKPTIDHYDCMID 535
>emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 45.8 bits (107), Expect(3) = 4e-07
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +2
Query: 293 ARAGNLEDTLESMT-MPFEPNIVSWQSLLGLGGCWSYRNEKIEKTASGSL 439
+RAG L + LE + MPFEP+ +SW+SL LGGCW++ + K+ K A+ +L
Sbjct: 538 SRAGLLXEALELINRMPFEPDAMSWKSL--LGGCWAHCDLKLGKIAAENL 585
Score = 30.8 bits (68), Expect(3) = 4e-07
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 159 FMVRMHMCSHSGLVLQARQYLDS 227
F+ + CSHSGLV +A+QYL S
Sbjct: 494 FIAVLTACSHSGLVAEAKQYLGS 516
Score = 23.5 bits (49), Expect(3) = 4e-07
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 238 NFVVDATIEHHNCMID 285
++ V TI+H++CMID
Sbjct: 520 DYGVKPTIDHYDCMID 535
>ref|XP_006399818.1| hypothetical protein EUTSA_v10012768mg [Eutrema salsugineum]
gi|557100908|gb|ESQ41271.1| hypothetical protein
EUTSA_v10012768mg [Eutrema salsugineum]
Length = 750
Score = 41.6 bits (96), Expect(3) = 3e-06
Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +2
Query: 293 ARAGNLEDTLESM-TMPFEPNIVSWQSLLGLGGCWSYRNEKIEKTASGSLEE 445
+RAG L++ L+ M MPFEP+ +SW+ L GCW+++N ++ + A L +
Sbjct: 533 SRAGLLDEALKFMKNMPFEPDSMSWKCF--LSGCWTHKNLELGEIAGEELRQ 582
Score = 28.9 bits (63), Expect(3) = 3e-06
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 159 FMVRMHMCSHSGLVLQARQYLDS 227
F+ + CSH+GLV Q + YLD+
Sbjct: 489 FIAVLTACSHAGLVAQGKDYLDT 511
Score = 26.6 bits (57), Expect(3) = 3e-06
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 226 LRKVNFVVDATIEHHNCMIDI 288
LRK N V TI+H++CMIDI
Sbjct: 513 LRKYN--VAPTIDHYDCMIDI 531
>ref|XP_007043814.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508707749|gb|EOX99645.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 762
Score = 43.9 bits (102), Expect(3) = 5e-06
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 293 ARAGNLEDTLESMT-MPFEPNIVSWQSLLGLGGCWSYRNEKIEKTASGSL 439
+RAG L++ E + MPF+P+ +SW+ LLG GCW +RN ++ K A+ +L
Sbjct: 539 SRAGLLQEAYELIKIMPFDPDSMSWKCLLG--GCWIHRNLELGKVAAENL 586
Score = 29.3 bits (64), Expect(3) = 5e-06
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 159 FMVRMHMCSHSGLVLQARQYLDS 227
F+ + CSHSGLV +A+ YL+S
Sbjct: 495 FVAVLTACSHSGLVTEAKLYLES 517
Score = 23.1 bits (48), Expect(3) = 5e-06
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 247 VDATIEHHNCMIDI 288
V TI+H+ CMIDI
Sbjct: 524 VRPTIDHYACMIDI 537