BLASTX nr result

ID: Papaver27_contig00053283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00053283
         (658 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301477.1| PREDICTED: uncharacterized protein LOC101302...    45   1e-06
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    57   7e-06
ref|XP_004301358.1| PREDICTED: putative ribonuclease H protein A...    40   7e-06
ref|XP_004298544.1| PREDICTED: uncharacterized protein LOC101292...    42   9e-06

>ref|XP_004301477.1| PREDICTED: uncharacterized protein LOC101302844 [Fragaria vesca
           subsp. vesca]
          Length = 400

 Score = 45.4 bits (106), Expect(2) = 1e-06
 Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
 Frame = +3

Query: 6   VFDNIQVNVQETTRRTNREFNEWLIHRPIQHSRSQNTDAELLS--WKSPDQGVFKINFDP 179
           V   +  N   T    +R F EW   +P   +          S  W  P   V KIN D 
Sbjct: 195 VMKRVSPNPVTTIENIHRSFKEWSEAQPDYDTPPDEPRRPTASKLWHPPPPNVVKINIDA 254

Query: 180 AFYKET*NTGLGLIWRGFAGSCHGVRCIPTXXXXXXXXXXXXLLKEIKWAKEVGLKEVQF 359
           A+     ++G+GL+ R   G       +              ++K ++ A+ + LK V  
Sbjct: 255 AWKTSNQHSGIGLVVRNHRGCSIAGASLLCSHNSVVEAEADSVVKGLQIARFLNLKNVII 314

Query: 360 EGDCNNVV 383
           EGDC  V+
Sbjct: 315 EGDCQEVI 322



 Score = 33.1 bits (74), Expect(2) = 1e-06
 Identities = 16/65 (24%), Positives = 34/65 (52%)
 Frame = +2

Query: 419 HWIYNNIIEDCIYLLRQFEFLSCSYVKRTVNNTTHVAAKLSLEFSVKTDWNNSYPTGIEN 598
           +W    I+    ++L  F+ +  ++V R  N     AAKL++     +DW N+ PT + +
Sbjct: 333 NWKILPILNRVKFMLPAFDEVLWNWVPREANRVADAAAKLAMVRLCSSDWANTPPTSLLH 392

Query: 599 CIQAN 613
            ++++
Sbjct: 393 ILRSD 397


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
 Frame = +3

Query: 135  WKSPDQGVFKINFDPAFYKET*NTGLGLIWRGFAGSCHGVRCI-PTXXXXXXXXXXXXLL 311
            W+ PD+G FK N D AF+KE+   G+G+  R  +G     R    T            LL
Sbjct: 1564 WRKPDEGHFKCNVDAAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLL 1623

Query: 312  KEIKWAKEVGLKEVQFEGDCNNVVLAELSIEPEEQFTGSIIIS*KTAF 455
              I+WAKE  L  + FE D   VV +  +   +    G+II   +T F
Sbjct: 1624 YAIRWAKEQNLNNITFELDSKRVVYSFHNTRNDVSDLGAIIRECRTTF 1671


>ref|XP_004301358.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 313

 Score = 40.0 bits (92), Expect(2) = 7e-06
 Identities = 33/129 (25%), Positives = 47/129 (36%)
 Frame = +3

Query: 3   LVFDNIQVNVQETTRRTNREFNEWLIHRPIQHSRSQNTDAELLSWKSPDQGVFKINFDPA 182
           ++  N   N         R    W   R      SQ+    +  W  P   V KINFD A
Sbjct: 106 VIMRNSTPNPSLVNENIQRGILNWEEARMSMVQPSQSIPRPISLWVPPLVNVVKINFDGA 165

Query: 183 FYKET*NTGLGLIWRGFAGSCHGVRCIPTXXXXXXXXXXXXLLKEIKWAKEVGLKEVQFE 362
           + +   N+GLG+I     G       +              LL  +K A  + L+ +  E
Sbjct: 166 WKESNHNSGLGIIICSHMGVSIAGASLFRSYNSTVEAEAKALLCGVKMAVVLKLEHIIVE 225

Query: 363 GDCNNVVLA 389
           GDC  V+ A
Sbjct: 226 GDCQEVIKA 234



 Score = 36.2 bits (82), Expect(2) = 7e-06
 Identities = 17/74 (22%), Positives = 38/74 (51%)
 Frame = +2

Query: 392 AVNRTRGAVHWIYNNIIEDCIYLLRQFEFLSCSYVKRTVNNTTHVAAKLSLEFSVKTDWN 571
           A+N +  +  W  + I++   +L+  F  +  ++V R  N   + AAKL+++     +W 
Sbjct: 234 ALNESLASPCWRISPILKKVAHLVPLFRRIHWNWVPREANRLANAAAKLAIQSLCSQEWA 293

Query: 572 NSYPTGIENCIQAN 613
           N  P  + N ++++
Sbjct: 294 NRPPNSLINVLRSD 307


>ref|XP_004298544.1| PREDICTED: uncharacterized protein LOC101292699 [Fragaria vesca
           subsp. vesca]
          Length = 206

 Score = 42.0 bits (97), Expect(2) = 9e-06
 Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 2/124 (1%)
 Frame = +3

Query: 18  IQVNVQETTRRTNREFNEWLIHRPIQHSRSQNTDAELLS--WKSPDQGVFKINFDPAFYK 191
           +  N+  T    +R F EW   +    +          S  W  P   V K+N D A+  
Sbjct: 4   VSPNLVTTIENIHRSFKEWSEAQSDYDTPPDEPRRPTASKLWHPPPPNVVKVNIDAAWKM 63

Query: 192 ET*NTGLGLIWRGFAGSCHGVRCIPTXXXXXXXXXXXXLLKEIKWAKEVGLKEVQFEGDC 371
              ++G+GL+ R   G       +              ++K ++ A+ + LK V  EGDC
Sbjct: 64  SNQHSGIGLVVRNHRGCSIAGASLLCSHNSVVEAEADSVVKGLQIARFLNLKNVIIEGDC 123

Query: 372 NNVV 383
             V+
Sbjct: 124 QEVI 127



 Score = 33.9 bits (76), Expect(2) = 9e-06
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = +2

Query: 419 HWIYNNIIEDCIYLLRQFEFLSCSYVKRTVNNTTHVAAKLSLEFSVKTDWNNSYPTGIEN 598
           +W    I+    +LL  F+ +  ++V R  N     AAKL++     +DW N+ PT + +
Sbjct: 138 NWKILPILNRVKFLLPAFDEVLWNWVPREANRVADAAAKLAMVRLCSSDWANTPPTSLLH 197

Query: 599 CIQAN 613
            ++++
Sbjct: 198 ILRSD 202


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