BLASTX nr result

ID: Papaver27_contig00053271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00053271
         (540 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363470.1| PREDICTED: F-box protein CPR30-like [Solanum...    46   4e-07
ref|XP_004247556.1| PREDICTED: F-box/kelch-repeat protein At3g06...    47   4e-06
ref|XP_006358426.1| PREDICTED: F-box/kelch-repeat protein At3g23...    42   4e-06
gb|EXB41587.1| F-box protein [Morus notabilis]                         50   5e-06
ref|XP_006356410.1| PREDICTED: F-box/kelch-repeat protein At3g23...    39   7e-06
ref|XP_006356412.1| PREDICTED: F-box/kelch-repeat protein At3g23...    39   7e-06

>ref|XP_006363470.1| PREDICTED: F-box protein CPR30-like [Solanum tuberosum]
          Length = 386

 Score = 45.8 bits (107), Expect(2) = 4e-07
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = -1

Query: 345 REYIMGCANGLVCYETSSRDIIFWNPYTRCHKKVPECSFRIKGETFTIENADIRSGF 175
           R  I+G  NGL+C +    D++ WNP  R ++K+P+   R+ G +       +  GF
Sbjct: 107 RVCIVGSVNGLICLDIEDNDLVLWNPTLRVYRKLPDSRLRVSGGSRLDRITSVMYGF 163



 Score = 33.9 bits (76), Expect(2) = 4e-07
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = -3

Query: 178 FCYDLKTKDYKVARMLIPESSKCIDVAVYSLKSDSWRTYTNI 53
           F YD  + DYKV  +    +   ++V +YSLK++SWRT  +I
Sbjct: 163 FGYDEFSDDYKVVGVRCSCTRYPLEVKIYSLKNNSWRTKGDI 204


>ref|XP_004247556.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
           lycopersicum]
          Length = 477

 Score = 46.6 bits (109), Expect(2) = 4e-06
 Identities = 15/40 (37%), Positives = 27/40 (67%)
 Frame = -1

Query: 339 YIMGCANGLVCYETSSRDIIFWNPYTRCHKKVPECSFRIK 220
           +++G  NGL+C   +  ++  WNP TR HK++P+ +F+ K
Sbjct: 111 FVVGSVNGLICLSNTENELFLWNPSTRKHKQLPDFTFKFK 150



 Score = 29.6 bits (65), Expect(2) = 4e-06
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = -3

Query: 178 FCYDLKTKDYKVARMLIPESSKCID---VAVYSLKSDSWRT 65
           F YD    DYKV   + P     +    V +YSLK DSWR+
Sbjct: 159 FGYDECHDDYKVVACIYPPGFLPLFGDYVKIYSLKDDSWRS 199


>ref|XP_006358426.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           tuberosum]
          Length = 379

 Score = 42.0 bits (97), Expect(2) = 4e-06
 Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -1

Query: 363 YPIEFE-REYIMGCANGLVCYETSSRDIIFWNPYTRCHKKVP 241
           YP +F    YI+G  NGL+C+ +  +++  WNP  R +KK+P
Sbjct: 94  YPRQFPCGVYIVGSVNGLICFVSREKELFLWNPSIRKYKKLP 135



 Score = 34.3 bits (77), Expect(2) = 4e-06
 Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 178 FCYDLKTKDYKVARMLIP-ESSKCIDVAVYSLKSDSWRTYTNIALARPPDVELVFLDENL 2
           F YD    DY +  +    + S  I+V  YSLKSDSWRT  N A   P      F+D  L
Sbjct: 153 FGYDEFHDDYNIVVIFARYDFSLPIEVKRYSLKSDSWRTVDNCASMVPLQQSGRFVDGKL 212


>gb|EXB41587.1| F-box protein [Morus notabilis]
          Length = 392

 Score = 50.4 bits (119), Expect(2) = 5e-06
 Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = -1

Query: 372 RILYPIEFEREY-IMGCANGLVCYETSSRDIIFWNPYTRCHKKVPECSFRIKGETFTIEN 196
           ++ +PI+ +R   +MG  NGL+    SS DI+FWNP T+ +KK+P  +  +   T +  N
Sbjct: 79  KLNHPIDDDRRVDVMGSCNGLLALSNSSNDIVFWNPSTKRYKKLPISNVNVNVSTSSARN 138

Query: 195 AD 190
            D
Sbjct: 139 LD 140



 Score = 25.4 bits (54), Expect(2) = 5e-06
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 178 FCYDLKTKDYKVARMLIPESSKC-IDVAVYSLKSDSWR 68
           F +D  T DYK+ ++     +    +V VYS K++SW+
Sbjct: 144 FGHDPVTDDYKLVKITFLAGNPFDSEVKVYSAKANSWK 181


>ref|XP_006356410.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like isoform X1
           [Solanum tuberosum] gi|565380014|ref|XP_006356411.1|
           PREDICTED: F-box/kelch-repeat protein At3g23880-like
           isoform X2 [Solanum tuberosum]
          Length = 389

 Score = 38.9 bits (89), Expect(2) = 7e-06
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = -3

Query: 202 RKC*HPIRFCYDLKTKDYKVARMLIPESSKCIDVAVYSLKSDSWRT 65
           R+C     F YD    DYKV  +         + A+YSLKSDSWRT
Sbjct: 173 RECWSKCGFGYDEVHNDYKVVGIFSSMIKANFEAAIYSLKSDSWRT 218



 Score = 36.6 bits (83), Expect(2) = 7e-06
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -1

Query: 348 EREYIMGCANGLVCYETSSRDIIFWNPYTRCHKKV 244
           +R YI G  NGLVC       ++ WNP  R  KKV
Sbjct: 130 QRVYISGSVNGLVCLADGFSGLVLWNPSIRKFKKV 164


>ref|XP_006356412.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like isoform X3
           [Solanum tuberosum]
          Length = 343

 Score = 38.9 bits (89), Expect(2) = 7e-06
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = -3

Query: 202 RKC*HPIRFCYDLKTKDYKVARMLIPESSKCIDVAVYSLKSDSWRT 65
           R+C     F YD    DYKV  +         + A+YSLKSDSWRT
Sbjct: 173 RECWSKCGFGYDEVHNDYKVVGIFSSMIKANFEAAIYSLKSDSWRT 218



 Score = 36.6 bits (83), Expect(2) = 7e-06
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -1

Query: 348 EREYIMGCANGLVCYETSSRDIIFWNPYTRCHKKV 244
           +R YI G  NGLVC       ++ WNP  R  KKV
Sbjct: 130 QRVYISGSVNGLVCLADGFSGLVLWNPSIRKFKKV 164


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