BLASTX nr result

ID: Papaver27_contig00052842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00052842
         (1038 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncat...    54   6e-06

>ref|XP_003635813.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355501748|gb|AES82951.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 385

 Score = 54.3 bits (129), Expect(2) = 6e-06
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
 Frame = +1

Query: 1   NPCTEVHTMLPQVPNITSESRNCTPPPFKTYGFGWDSESQHYKILHMAATWKRWGSAVAA 180
           NP      +LP +  I      C   PF  Y FG+D    +YKI+ +++   +  S V  
Sbjct: 150 NPSIRKFKVLPPLEKI-----QCKRVPFSIYSFGYDHFIDNYKIIVVSSCINK--SEVCI 202

Query: 181 ITLGEKSWRYLKNESFNFEGESHEV-VFSNGKIYWKAIETSGELGRNFSQSFVIAAFNIN 357
           +TLG   WR +K+  F ++G  HE  +F +G + W AI+ S       S S + A  +++
Sbjct: 203 LTLGTDYWRRIKD--FPYDGPLHESGIFVSGTVNWLAIDNSS------SNSSLRAIVSLD 254

Query: 358 REAFSLTQPPEPLVGN 405
            E  S  + P P + N
Sbjct: 255 LENESYKKLPHPDLEN 270



 Score = 23.5 bits (49), Expect(2) = 6e-06
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 483 YHIWILKEDEGVSSWDHMFSFNITIPRFHS--LRPLHISGKFEMLLFGPVMDNDQYSMVL 656
           + IW++KE     SW  +++      R  S   + L++S   +ML+    + + +  +V+
Sbjct: 292 FDIWVMKEYGNKESWTKLYNVPYMEDRGLSSYTKVLYVSEDDKMLMEFYELGSSKLKLVV 351

Query: 657 YN 662
           Y+
Sbjct: 352 YD 353


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