BLASTX nr result
ID: Papaver27_contig00052469
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00052469
(568 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi... 231 1e-58
emb|CBI29560.3| unnamed protein product [Vitis vinifera] 231 1e-58
ref|XP_007047622.1| Pentatricopeptide repeat (PPR) superfamily p... 230 2e-58
ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containi... 229 3e-58
emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera] 228 7e-58
emb|CBI18837.3| unnamed protein product [Vitis vinifera] 223 2e-56
ref|XP_004288283.1| PREDICTED: pentatricopeptide repeat-containi... 222 5e-56
ref|XP_007208151.1| hypothetical protein PRUPE_ppa022107mg [Prun... 222 6e-56
gb|EXB78258.1| hypothetical protein L484_007776 [Morus notabilis] 217 2e-54
ref|XP_002320672.2| pentatricopeptide repeat-containing family p... 214 2e-53
ref|XP_006292229.1| hypothetical protein CARUB_v10018435mg [Caps... 213 3e-53
ref|XP_006404111.1| hypothetical protein EUTSA_v10010157mg [Eutr... 213 4e-53
ref|NP_190540.1| pentatricopeptide repeat-containing protein [Ar... 211 8e-53
ref|XP_002875992.1| pentatricopeptide repeat-containing protein ... 207 2e-51
ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containi... 206 3e-51
ref|XP_007148494.1| hypothetical protein PHAVU_006G213400g [Phas... 203 2e-50
ref|XP_006358483.1| PREDICTED: pentatricopeptide repeat-containi... 203 3e-50
ref|XP_002530602.1| pentatricopeptide repeat-containing protein,... 202 4e-50
ref|XP_004230390.1| PREDICTED: pentatricopeptide repeat-containi... 199 3e-49
ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containi... 199 3e-49
>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 231 bits (589), Expect = 1e-58
Identities = 112/172 (65%), Positives = 135/172 (78%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
MNQ+ W Q FR++L+TCI ER+L TGKSL SLYIK +P STY SNHFI LYSKCGRL
Sbjct: 1 MNQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLA 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
A +F I +PNVFS+NAII+AYAKES+ IAH+LFD+IP+PDLVS+NTLIS YAD GE
Sbjct: 61 WARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
PALGL MREMG+DMDGFTLS I AC +DVGLI Q+H +++G +S+
Sbjct: 121 TAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSY 172
>emb|CBI29560.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 231 bits (589), Expect = 1e-58
Identities = 112/172 (65%), Positives = 135/172 (78%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
MNQ+ W Q FR++L+TCI ER+L TGKSL SLYIK +P STY SNHFI LYSKCGRL
Sbjct: 1 MNQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLA 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
A +F I +PNVFS+NAII+AYAKES+ IAH+LFD+IP+PDLVS+NTLIS YAD GE
Sbjct: 61 WARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
PALGL MREMG+DMDGFTLS I AC +DVGLI Q+H +++G +S+
Sbjct: 121 TAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSY 172
>ref|XP_007047622.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508699883|gb|EOX91779.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 718
Score = 230 bits (586), Expect = 2e-58
Identities = 109/172 (63%), Positives = 133/172 (77%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
M QM W Q FRN+L+TCI R+LLTGKSL +LYIK ++P STYLSNHFI LYSKCG L
Sbjct: 1 MTQMSWTIQTFRNLLKTCITHRDLLTGKSLHALYIKSLIPSSTYLSNHFILLYSKCGHLT 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
AHN+F +PN FS+NAII+AYAKES +AH+LFD+IPQPDLVS+NTLIS YAD G+
Sbjct: 61 AAHNAFHQTQDPNTFSFNAIIAAYAKESFPFVAHQLFDQIPQPDLVSYNTLISAYADCGK 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
PALGL +MRE+G +MDGFTLSG I AC D+ L+ Q+HCF + G +S+
Sbjct: 121 TEPALGLFKKMRELGFEMDGFTLSGVITACLNDLFLLRQLHCFLVFCGFHSY 172
>ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 358
Score = 229 bits (585), Expect = 3e-58
Identities = 112/172 (65%), Positives = 134/172 (77%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
MNQ+ W Q FR++L+TCI ER+L TGKSL SLYIK +P STY SNHFI LYSKCGRL
Sbjct: 1 MNQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLA 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
A +F+ I +PNVFS+NAII+AYAKES IAH+LFD+IP PDLVS+NTLIS YAD GE
Sbjct: 61 WARKAFEDISDPNVFSFNAIIAAYAKESPPLIAHQLFDQIPVPDLVSYNTLISAYADCGE 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
PALGL MREMG+DMDGFTLS I AC +DVGLI Q+H +++G +S+
Sbjct: 121 TAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSY 172
>emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 228 bits (582), Expect = 7e-58
Identities = 111/172 (64%), Positives = 134/172 (77%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
MNQ+ W Q FR++L+TCI ER+L TGKSL SLYIK +P STY SNHFI LYSKCGRL
Sbjct: 1 MNQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLA 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
A +F I +PNVFS+NAII+AYAKES+ IAH+LFD+IP+PDLVS+NTLIS YAD GE
Sbjct: 61 WARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGE 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
PALGL MREMG+DMD FTLS I AC +DVGLI Q+H +++G +S+
Sbjct: 121 TAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSY 172
>emb|CBI18837.3| unnamed protein product [Vitis vinifera]
Length = 1589
Score = 223 bits (569), Expect = 2e-56
Identities = 110/165 (66%), Positives = 128/165 (77%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
MNQ+ W Q FR++L+TCI ER+L TGKSL SLYIK +P STY SNHFI LYSKCGRL
Sbjct: 1 MNQISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLA 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
A +F+ I +PNVFS+NAII+AYAKES IAH+LFD+IP PDLVS+NTLIS YAD GE
Sbjct: 61 WARKAFEDISDPNVFSFNAIIAAYAKESPPLIAHQLFDQIPVPDLVSYNTLISAYADCGE 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGI 547
PALGL MREMG+DMDGFTLS I AC +DVGLI Q+H +
Sbjct: 121 TAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAV 165
>ref|XP_004288283.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Fragaria vesca subsp. vesca]
Length = 719
Score = 222 bits (566), Expect = 5e-56
Identities = 104/170 (61%), Positives = 131/170 (77%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
M Q+ W Q FRN+L+TCI ER+L TGK+L +LY K ++P STY+SNHFI LYS RL
Sbjct: 1 MKQVTWTFQTFRNVLKTCIAERDLYTGKALHALYFKSLIPSSTYISNHFILLYSNSRRLL 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
A N+F + +PNVFSYNAII+AYAK+SQ ++AH+LFDEIP+PDLVS+NTLIS YA+ GE
Sbjct: 61 SARNAFCATHDPNVFSYNAIIAAYAKQSQTKLAHQLFDEIPEPDLVSYNTLISAYAERGE 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLN 562
ALGL GRMRE+G+D DGFT+SG I C +DVGLI Q+HC + G +
Sbjct: 121 TEKALGLFGRMREVGLDPDGFTISGVITGCCDDVGLIRQLHCVVVRGGFD 170
Score = 56.2 bits (134), Expect = 6e-06
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 8/121 (6%)
Frame = +2
Query: 131 GKSLQSLYIKGVVPESTY-LSNHFITLYSKCGRLRDAHNSFDSILEPNVFSYNAIISAYA 307
GK + +L IK +P + ++N + +YSKCG+L+DA FD + E N S N++I+ YA
Sbjct: 362 GKQIHALAIKSEIPSNRISVNNALVAMYSKCGKLQDARRLFDRMPEHNTVSLNSMIAGYA 421
Query: 308 KESQMQIAHKLFDEIPQ----PDLVSWNTLISGYADSG---EGRPALGLLGRMREMGIDM 466
+ + LF+ + Q P +++ +++S A +G EGR ++ + GI
Sbjct: 422 QHGIGMESLCLFEHMLQTNVVPTSITFISVLSACAHTGKVEEGRKYFSMM--QEKFGIKP 479
Query: 467 D 469
D
Sbjct: 480 D 480
>ref|XP_007208151.1| hypothetical protein PRUPE_ppa022107mg [Prunus persica]
gi|462403793|gb|EMJ09350.1| hypothetical protein
PRUPE_ppa022107mg [Prunus persica]
Length = 720
Score = 222 bits (565), Expect = 6e-56
Identities = 105/172 (61%), Positives = 130/172 (75%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
MNQ+ Q FR++L+TCI ER+L TGKSL +LY K ++P STYLSNHFI LYSKCGRL
Sbjct: 1 MNQLSCALQNFRHLLKTCIAERDLFTGKSLHALYFKSLLPPSTYLSNHFILLYSKCGRLS 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
A N+FD EPNVFS+NAI++AYAKES IAH++FD+IP PDLVS+NTLIS YAD GE
Sbjct: 61 SARNAFDQTQEPNVFSFNAIVAAYAKESHTHIAHQMFDKIPHPDLVSYNTLISAYADRGE 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
PAL L MR MG+DMDGFT+S I C +D+GLI Q+H ++ G +S+
Sbjct: 121 TEPALSLFTGMRNMGLDMDGFTISAVITGCCDDIGLIRQLHSVAVSGGFDSY 172
>gb|EXB78258.1| hypothetical protein L484_007776 [Morus notabilis]
Length = 719
Score = 217 bits (553), Expect = 2e-54
Identities = 108/172 (62%), Positives = 135/172 (78%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
MNQ+ Q FR++L+TCI +R+L TGKSL +LYIK +V STYLSNHFI LYSKCGRL
Sbjct: 1 MNQISRTLQNFRHLLKTCIADRDLFTGKSLHTLYIKSLVSHSTYLSNHFIVLYSKCGRLS 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
A +F+ I EPNVF++NAII+AYAKES + +A +LFD+IP+PDLVS+NTLIS YAD G+
Sbjct: 61 LARRAFNGIPEPNVFTFNAIIAAYAKESLIHVARQLFDQIPRPDLVSYNTLISAYADRGD 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
R AL L G MREMG+DMDGFTLS AI A S+DVGLI Q+H ++ G +S+
Sbjct: 121 TRQALCLFGGMREMGLDMDGFTLSAAIAARSDDVGLIRQLHSVAVSGGFDSY 172
Score = 64.7 bits (156), Expect = 2e-08
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Frame = +2
Query: 131 GKSLQSLYIKGVVPESTY-LSNHFITLYSKCGRLRDAHNSFDSILEPNVFSYNAIISAYA 307
GK + SL IK +P + +SN IT+YSKCG LRDA FD + E N S N++I+ YA
Sbjct: 362 GKQIHSLAIKSEIPSNRISVSNALITMYSKCGNLRDARRLFDRMPEHNTVSLNSMITGYA 421
Query: 308 KESQMQIAHKLFDEIPQ----PDLVSWNTLISGYADSGEGRPALGLLGRMRE 451
+ + LF+++ Q P +++ ++IS A +G+ M+E
Sbjct: 422 QHGFGMESISLFEQLLQANIVPSSITFISIISACAHTGKVSEGQKYFNMMKE 473
Score = 55.5 bits (132), Expect = 1e-05
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Frame = +2
Query: 221 GRLRDAHN-----SFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQ-PDLVSWNT 382
G +R H+ FDS N N++I+ Y K + A K+F + + D VSWN+
Sbjct: 155 GLIRQLHSVAVSGGFDSYTSVN----NSLITYYGKNGHLGEAKKIFYGMSEMKDEVSWNS 210
Query: 383 LISGYADSGEGRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLI--MQIHCFGITAG 556
+I Y + EG AL L M MG ++D FTL+ + A + + +Q H I AG
Sbjct: 211 MIVAYGQNREGSKALSLFREMVRMGFNVDMFTLASVLTAFTSMGDFLGGLQFHAKLIKAG 270
Query: 557 LN 562
N
Sbjct: 271 FN 272
>ref|XP_002320672.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550323097|gb|EEE98987.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 720
Score = 214 bits (544), Expect = 2e-53
Identities = 101/172 (58%), Positives = 128/172 (74%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
M Q W Q FR IL++CI ++LLTGKSL ++Y+K ++P STYLSNHFI LYSKC L
Sbjct: 1 MTQFSWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLT 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
AH++F+ EPNVFS+NA+I+AYAKES + +AH LFD+IPQPDLVS+NTLI+ YAD G+
Sbjct: 61 TAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGD 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
AL L G MREMG+ MDGFT SG I AC VGLI Q+H ++G +S+
Sbjct: 121 TLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSY 172
Score = 56.2 bits (134), Expect = 6e-06
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Frame = +2
Query: 161 GVVPESTYLSNHFITLYSKCGRLRDAHN-SFDSILEPNVFSYNAIISAYAKESQMQIAHK 337
G+V + S + G +R H+ +F S + V N++++ Y+K ++ A
Sbjct: 135 GLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEM 194
Query: 338 LFDEIPQP--DLVSWNTLISGYADSGEGRPALGLLGRMREMGIDMDGFTLSGAIK--ACS 505
+F+ + + D VSWN++I Y G AL L M G ++D FTL+ + +C
Sbjct: 195 VFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCV 254
Query: 506 EDVGLIMQIHCFGITAGLN 562
ED+ +Q H I G N
Sbjct: 255 EDLSGGLQFHAKAIKTGFN 273
>ref|XP_006292229.1| hypothetical protein CARUB_v10018435mg [Capsella rubella]
gi|482560936|gb|EOA25127.1| hypothetical protein
CARUB_v10018435mg [Capsella rubella]
Length = 721
Score = 213 bits (542), Expect = 3e-53
Identities = 102/172 (59%), Positives = 129/172 (75%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
MNQ PW + FR++L + ER+L TGK+L LY+K +V STYLSNHF+ LYSKCG L
Sbjct: 1 MNQTPWKFKSFRDLLLKSVAERDLFTGKTLHGLYVKSIVASSTYLSNHFVNLYSKCGCLS 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
A +FDS EPNVFSYN I+ AYAK+S++ IA +LFDEIPQPD VS+NTLISGYAD+ E
Sbjct: 61 YAKAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARE 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
A+ L RMRE+G ++DGFTLSG I AC + VGLI Q+HCF ++ G +S+
Sbjct: 121 TVAAMVLFIRMRELGFEVDGFTLSGLIAACCDRVGLIKQLHCFAVSGGFDSY 172
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/95 (34%), Positives = 48/95 (50%)
Frame = +2
Query: 284 NAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGEGRPALGLLGRMREMGID 463
NA+IS Y K +Q A ++FD +P+ ++VS+N +I GYA G G AL L +M GI
Sbjct: 385 NALISLYYKNGNLQDARRVFDRMPERNVVSYNCMIKGYAQHGHGTEALHLYQQMLNSGIA 444
Query: 464 MDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
+ T + AC+ HC + G F
Sbjct: 445 PNNITFVAVLSACA---------HCGKVDEGQKYF 470
>ref|XP_006404111.1| hypothetical protein EUTSA_v10010157mg [Eutrema salsugineum]
gi|557105230|gb|ESQ45564.1| hypothetical protein
EUTSA_v10010157mg [Eutrema salsugineum]
Length = 721
Score = 213 bits (541), Expect = 4e-53
Identities = 101/172 (58%), Positives = 129/172 (75%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
MN P + FR IL C+ ER+L TGKSL +LY+K ++ STYLSNHF+ LYSKCGRL
Sbjct: 1 MNNTPLTFKSFRYILLKCVAERDLFTGKSLHALYVKSLIASSTYLSNHFVNLYSKCGRLS 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
A +FDS EPNVFSYN I+ AYAK+S++ IA +LFDEIPQPD +S+NTLISGYAD+ E
Sbjct: 61 YARAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTISYNTLISGYADARE 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
PA+ L +MRE+G ++DGFTLSG I AC + V LI Q+HCF ++ G +S+
Sbjct: 121 TVPAMILFKKMRELGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSY 172
>ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g49710 gi|6723416|emb|CAB66909.1| putative protein
[Arabidopsis thaliana] gi|332645058|gb|AEE78579.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 721
Score = 211 bits (538), Expect = 8e-53
Identities = 101/172 (58%), Positives = 129/172 (75%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
MNQ PW + FR++L + ER+L TGKSL +LY+K +V STYLSNHF+ LYSKCGRL
Sbjct: 1 MNQTPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLS 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
A +F S EPNVFSYN I+ AYAK+S++ IA +LFDEIPQPD VS+NTLISGYAD+ E
Sbjct: 61 YARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARE 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
A+ L RMR++G ++DGFTLSG I AC + V LI Q+HCF ++ G +S+
Sbjct: 121 TFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSY 172
Score = 58.2 bits (139), Expect = 2e-06
Identities = 34/95 (35%), Positives = 47/95 (49%)
Frame = +2
Query: 284 NAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGEGRPALGLLGRMREMGID 463
NA+IS Y K +Q A +FD +P+ + VS+N +I GYA G G AL L RM + GI
Sbjct: 385 NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIA 444
Query: 464 MDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
+ T + AC+ HC + G F
Sbjct: 445 PNKITFVAVLSACA---------HCGKVDEGQEYF 470
>ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321830|gb|EFH52251.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 721
Score = 207 bits (527), Expect = 2e-51
Identities = 100/172 (58%), Positives = 127/172 (73%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
MNQ W + FR++L + ER+L TGKSL +LY+K +V STYLSNHF+ LYSKCG L
Sbjct: 1 MNQTQWKFKSFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLS 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
A +FDS EPNVFSYN I+ AYAK+S++ IA +LFDE PQPD VS+NTLISGYAD+ E
Sbjct: 61 YARAAFDSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARE 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
A+ L RMRE+G ++DGFTLSG I AC + V LI Q+HCF ++ G +S+
Sbjct: 121 TVAAMVLFKRMRELGFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSGGFDSY 172
Score = 58.5 bits (140), Expect = 1e-06
Identities = 33/95 (34%), Positives = 47/95 (49%)
Frame = +2
Query: 284 NAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGEGRPALGLLGRMREMGID 463
NA+IS Y K + A ++FD +P+ + VS+N +I GYA G G AL L RM + GI
Sbjct: 385 NALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIA 444
Query: 464 MDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
+ T + AC+ HC + G F
Sbjct: 445 PNNITFVAILSACA---------HCGKVDEGQKYF 470
>ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 206 bits (525), Expect = 3e-51
Identities = 96/168 (57%), Positives = 124/168 (73%)
Frame = +2
Query: 65 PWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLRDAHN 244
P Q FRN+L+ CI +R+L+TGK+L +LY K ++P STYLSNHF LYSKCG L +A
Sbjct: 6 PLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQT 65
Query: 245 SFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGEGRPA 424
SFD PNVFSYN +I+AYAK S + +A ++FDEIPQPD+VS+NTLI+ YAD GE RPA
Sbjct: 66 SFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPA 125
Query: 425 LGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
L L +RE+ +DGFTLSG I AC +DVGL+ Q+HCF + G + +
Sbjct: 126 LRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCY 173
>ref|XP_007148494.1| hypothetical protein PHAVU_006G213400g [Phaseolus vulgaris]
gi|561021717|gb|ESW20488.1| hypothetical protein
PHAVU_006G213400g [Phaseolus vulgaris]
Length = 722
Score = 203 bits (517), Expect = 2e-50
Identities = 96/168 (57%), Positives = 123/168 (73%)
Frame = +2
Query: 65 PWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLRDAHN 244
P+ Q FRN+L+TCI +R+L+TGK+L +LY K ++P STYLSNHF LYSKCG L A
Sbjct: 6 PFQVQTFRNLLKTCIAQRDLITGKTLHALYFKCLIPPSTYLSNHFTLLYSKCGSLHSAQI 65
Query: 245 SFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGEGRPA 424
SF PNVFSYN +I+AYAK S + +AH+LFDE PQPDLVS+NTLI+ YAD GE P
Sbjct: 66 SFHLTQHPNVFSYNTLINAYAKHSLVHLAHQLFDETPQPDLVSYNTLIAAYADRGECGPV 125
Query: 425 LGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
L L +RE+G+ +DGFTLSG I AC +DV L+ Q+HCF + G + +
Sbjct: 126 LRLFEEVRELGLGLDGFTLSGVITACGDDVVLLRQLHCFVVMCGYDCY 173
>ref|XP_006358483.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Solanum tuberosum]
Length = 720
Score = 203 bits (516), Expect = 3e-50
Identities = 98/164 (59%), Positives = 129/164 (78%)
Frame = +2
Query: 77 QWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLRDAHNSFDS 256
Q FR+IL+TCI +R+LLTGKSL +LYIK ++P STY SNHFI LYSKCG L A +F++
Sbjct: 11 QQFRHILKTCIAQRDLLTGKSLHTLYIKSLIPPSTYFSNHFILLYSKCGLLTTARRAFEA 70
Query: 257 ILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGEGRPALGLL 436
EPNVFS+NAI++AYAKE+Q +AH+LFD+IPQPD+VS+NTLIS YAD G +PAL L
Sbjct: 71 TPEPNVFSFNAILNAYAKEAQPHLAHQLFDKIPQPDIVSYNTLISAYADLGYTQPALRLF 130
Query: 437 GRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
+++ G+ MDGFTLS AI A +++V I Q+H I+AGL+S+
Sbjct: 131 LDLKDTGLAMDGFTLSAAITAANDNVDFITQLHSLSISAGLDSY 174
>ref|XP_002530602.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529850|gb|EEF31782.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 567
Score = 202 bits (515), Expect = 4e-50
Identities = 98/172 (56%), Positives = 125/172 (72%)
Frame = +2
Query: 53 MNQMPWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLR 232
M+Q+ W Q FR++L+ CI ++LL GKSL +LY+K ++P STYLSNHFI LYSKC RL
Sbjct: 1 MHQISWTLQTFRHLLKECIANKDLLIGKSLYTLYLKSLLPPSTYLSNHFIILYSKCNRLT 60
Query: 233 DAHNSFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGE 412
AH++F+ EPNVFS+N ++ AYAK+S IA LFD+IPQPD +S+NTLI+ YAD G+
Sbjct: 61 LAHHAFNQNHEPNVFSFNVLLDAYAKKSLTHIARGLFDQIPQPDAISYNTLITAYADCGD 120
Query: 413 GRPALGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
AL L MRE GIDMDG+TLSG I AC DV LI Q+HC GL+S+
Sbjct: 121 SLNALYLFREMRETGIDMDGYTLSGVITACCNDVNLIRQLHCLAGNYGLDSY 172
Score = 58.2 bits (139), Expect = 2e-06
Identities = 34/117 (29%), Positives = 65/117 (55%), Gaps = 8/117 (6%)
Frame = +2
Query: 92 ILRTCILERNLLTGKSLQSLYIKGVVPESTY-LSNHFITLYSKCGRLRDAHNSFDSILEP 268
++R C + GK + ++ +K +P + ++N + +YSKCG L+DA FD + E
Sbjct: 350 VIRACSNLSSPSQGKQIHAMTVKSEIPSNQISVNNALVAMYSKCGNLQDARRLFDRMPEH 409
Query: 269 NVFSYNAIISAYAKESQMQIAHKLFDEIPQ----PDLVSWNTLISGYADSG---EGR 418
N S+N+II+ YA+ + LF+++ + P +++ +++S A +G EGR
Sbjct: 410 NTVSFNSIIAGYAQHGIKTESLCLFEQMLEIGIAPTRITFISVLSACAHTGKVEEGR 466
Score = 55.8 bits (133), Expect = 8e-06
Identities = 47/153 (30%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
Frame = +2
Query: 131 GKSLQSLYI------KGVVPESTYLSNHFITLYSKCGRLRDAHNSFDSI-LEPNVFSYNA 289
G SL +LY+ G+ + LS + +R H + L+ V N+
Sbjct: 119 GDSLNALYLFREMRETGIDMDGYTLSGVITACCNDVNLIRQLHCLAGNYGLDSYVSVKNS 178
Query: 290 IISAYAKESQMQIAHKLFD--EIPQPDLVSWNTLISGYADSGEGRPALGLLGRMREMGID 463
++ Y K ++ A ++F EI D VSWNT+I Y EG AL L M GID
Sbjct: 179 FVTYYGKNGFLEEAERVFYGIEIENRDQVSWNTMIVAYGRQREGFKALKLFQEMTHRGID 238
Query: 464 MDGFTLSGAIKA--CSEDVGLIMQIHCFGITAG 556
+D +TL+ + A C ED+ Q H I G
Sbjct: 239 VDMYTLASVLTAFTCLEDLFGGFQFHANLIKTG 271
Score = 55.5 bits (132), Expect = 1e-05
Identities = 27/74 (36%), Positives = 45/74 (60%)
Frame = +2
Query: 284 NAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGEGRPALGLLGRMREMGID 463
NA+++ Y+K +Q A +LFD +P+ + VS+N++I+GYA G +L L +M E+GI
Sbjct: 384 NALVAMYSKCGNLQDARRLFDRMPEHNTVSFNSIIAGYAQHGIKTESLCLFEQMLEIGIA 443
Query: 464 MDGFTLSGAIKACS 505
T + AC+
Sbjct: 444 PTRITFISVLSACA 457
>ref|XP_004230390.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Solanum lycopersicum]
Length = 720
Score = 199 bits (507), Expect = 3e-49
Identities = 97/164 (59%), Positives = 127/164 (77%)
Frame = +2
Query: 77 QWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLRDAHNSFDS 256
Q FR+IL+TCI +R+L TGKSL +LYIK ++P STY SNHFI LYSKCG L A +F++
Sbjct: 11 QQFRHILKTCIAQRDLFTGKSLHTLYIKALIPPSTYFSNHFILLYSKCGLLTAARRAFEA 70
Query: 257 ILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGEGRPALGLL 436
EPNVFS+NAI++AYAKE+Q +AH+LFD+IPQPD+VS+NTLIS YAD G PAL L
Sbjct: 71 TPEPNVFSFNAILNAYAKEAQPHLAHQLFDKIPQPDIVSYNTLISAYADLGYTLPALRLF 130
Query: 437 GRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAGLNSF 568
+++ G+ MDGFTLS AI A +++V I Q+H I+AGL+S+
Sbjct: 131 LDLKDTGLVMDGFTLSAAITAANDNVDFITQLHSLSISAGLDSY 174
>ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 199 bits (507), Expect = 3e-49
Identities = 94/164 (57%), Positives = 119/164 (72%)
Frame = +2
Query: 65 PWNHQWFRNILRTCILERNLLTGKSLQSLYIKGVVPESTYLSNHFITLYSKCGRLRDAHN 244
P Q FRN+L+ CI +R+L+TGK L +LY K ++P STYLSNHF LYSKCG L +A
Sbjct: 6 PLQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQT 65
Query: 245 SFDSILEPNVFSYNAIISAYAKESQMQIAHKLFDEIPQPDLVSWNTLISGYADSGEGRPA 424
SF PNVFSYN +I+AYAK S + IA ++FDEIPQPD+VS+NTLI+ YAD GE P
Sbjct: 66 SFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPT 125
Query: 425 LGLLGRMREMGIDMDGFTLSGAIKACSEDVGLIMQIHCFGITAG 556
L L +RE+ + +DGFTLSG I AC +DVGL+ Q+HCF + G
Sbjct: 126 LRLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCG 169