BLASTX nr result
ID: Papaver27_contig00052173
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver27_contig00052173 (458 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AHB24928.1| chloroplast chlorophyll a-b binding protein 2/3 [... 47 2e-07 sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro... 45 6e-07 ref|XP_004303878.1| PREDICTED: chlorophyll a-b binding protein 4... 42 6e-07 ref|XP_004294267.1| PREDICTED: chlorophyll a-b binding protein 4... 42 1e-06 ref|XP_007217260.1| hypothetical protein PRUPE_ppa010015mg [Prun... 41 2e-06 ref|XP_006365561.1| PREDICTED: chlorophyll a-b binding protein 1... 45 2e-06 emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S... 43 4e-06 ref|XP_007215816.1| hypothetical protein PRUPE_ppa010034mg [Prun... 39 5e-06 ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1... 45 5e-06 ref|NP_564339.1| chlorophyll A/B binding protein 3 [Arabidopsis ... 42 6e-06 gb|AAL38341.1| chlorophyll a/b-binding protein [Arabidopsis thal... 42 6e-06 dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein... 45 6e-06 dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein... 44 6e-06 gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum... 43 8e-06 ref|XP_004303877.1| PREDICTED: chlorophyll a-b binding protein, ... 40 8e-06 dbj|BAA25388.1| light harvesting chlorophyll a/b-binding protein... 44 8e-06 gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum] 43 8e-06 gb|AAA80593.1| chlorophyll a/b binding protein [Solanum tuberosum] 43 8e-06 gb|AAA80595.1| chlorophyll a/b binding protein, partial [Solanum... 43 9e-06 >gb|AHB24928.1| chloroplast chlorophyll a-b binding protein 2/3 [Sedum alfredii] Length = 267 Score = 47.0 bits (110), Expect(2) = 2e-07 Identities = 28/45 (62%), Positives = 31/45 (68%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQDPDRVKCLGPFSGESPSYL 5 R+TM +K AKPK S A SS PDRVK LGPFSGE+PSYL Sbjct: 32 RVTM---RKTAAKPKPS--ASSSPWYGPDRVKYLGPFSGEAPSYL 71 Score = 33.5 bits (75), Expect(2) = 2e-07 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA S A SS SLAG+AV +S S++FG G Sbjct: 1 MAASTMALSSLSLAGQAVKTASSASEVFGSG 31 >sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic; AltName: Full=LHCII type I CAB; Short=LHCP; Flags: Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b binding protein precursor [Spinacia oleracea] gi|193783447|emb|CAJ77389.3| major chlorophyll a/b binding protein LHCb1.3 [Spinacia oleracea] Length = 267 Score = 45.4 bits (106), Expect(2) = 6e-07 Identities = 27/45 (60%), Positives = 31/45 (68%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQDPDRVKCLGPFSGESPSYL 5 RITM +K KPK+ ++ SS PDRVK LGPFSGESPSYL Sbjct: 32 RITM---RKTAGKPKTVQS--SSPWYGPDRVKYLGPFSGESPSYL 71 Score = 33.5 bits (75), Expect(2) = 6e-07 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA+S A SSPSLAG+AV S+I G+G Sbjct: 1 MASSTMALSSPSLAGKAVKLGPTASEIIGEG 31 >ref|XP_004303878.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 267 Score = 42.0 bits (97), Expect(2) = 6e-07 Identities = 29/47 (61%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQ--DPDRVKCLGPFSGESPSYL 5 RITM +K AK K AVSS S PDRVK LGPFSGE+PSYL Sbjct: 32 RITM---RKTGAKSK----AVSSGSPWYGPDRVKYLGPFSGEAPSYL 71 Score = 37.0 bits (84), Expect(2) = 6e-07 Identities = 19/31 (61%), Positives = 21/31 (67%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA S A SSPSLAG+AV S S IFG+G Sbjct: 1 MAASTMALSSPSLAGQAVQLSPAASNIFGEG 31 >ref|XP_004294267.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 267 Score = 41.6 bits (96), Expect(2) = 1e-06 Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQ--DPDRVKCLGPFSGESPSYL 5 R+TM +K AK K+ VSS S PDRVK LGPFSGE+PSYL Sbjct: 32 RVTM---RKTAAKSKN----VSSGSPWYGPDRVKYLGPFSGEAPSYL 71 Score = 36.2 bits (82), Expect(2) = 1e-06 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA+S A SSPSLAG+AV S S +FG+G Sbjct: 1 MASSAMALSSPSLAGQAVKLSPSTSTLFGEG 31 >ref|XP_007217260.1| hypothetical protein PRUPE_ppa010015mg [Prunus persica] gi|556367|gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein [Prunus persica] gi|462413410|gb|EMJ18459.1| hypothetical protein PRUPE_ppa010015mg [Prunus persica] Length = 267 Score = 40.8 bits (94), Expect(2) = 2e-06 Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQ--DPDRVKCLGPFSGESPSYL 5 RITM +K +K K+ VSS S PDRVK LGPFSGE+PSYL Sbjct: 32 RITM---RKTASKSKN----VSSGSPWYGPDRVKYLGPFSGEAPSYL 71 Score = 36.6 bits (83), Expect(2) = 2e-06 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA+S A SSPSLAG+AV S +S I G+G Sbjct: 1 MASSTMALSSPSLAGQAVKLGSSVSNIVGEG 31 >ref|XP_006365561.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum tuberosum] Length = 265 Score = 45.1 bits (105), Expect(2) = 2e-06 Identities = 29/45 (64%), Positives = 30/45 (66%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQDPDRVKCLGPFSGESPSYL 5 RITM +K VAK SS SS PDRVK LGPFSGESPSYL Sbjct: 32 RITM---RKAVAKSASS----SSPWYGPDRVKYLGPFSGESPSYL 69 Score = 32.0 bits (71), Expect(2) = 2e-06 Identities = 17/31 (54%), Positives = 19/31 (61%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA S A SSPS AG+AV S S+I G G Sbjct: 1 MAASTMALSSPSFAGQAVKLSPSASEITGNG 31 >emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea] Length = 267 Score = 43.1 bits (100), Expect(2) = 4e-06 Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQ--DPDRVKCLGPFSGESPSYL 5 R+TM +K KPK+ VSS S PDRVK LGPFSGE+PSYL Sbjct: 32 RVTM---RKTAGKPKN----VSSGSPWYGPDRVKYLGPFSGEAPSYL 71 Score = 33.1 bits (74), Expect(2) = 4e-06 Identities = 16/31 (51%), Positives = 21/31 (67%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA+S A SSPSLAG+A+ S+I G+G Sbjct: 1 MASSTMALSSPSLAGKAIKLGPTASEILGEG 31 >ref|XP_007215816.1| hypothetical protein PRUPE_ppa010034mg [Prunus persica] gi|462411966|gb|EMJ17015.1| hypothetical protein PRUPE_ppa010034mg [Prunus persica] Length = 267 Score = 39.3 bits (90), Expect(2) = 5e-06 Identities = 22/35 (62%), Positives = 23/35 (65%), Gaps = 2/35 (5%) Frame = -2 Query: 103 KPKSSKTAVSSNSQ--DPDRVKCLGPFSGESPSYL 5 K S VSS S PDRVK LGPFSGE+PSYL Sbjct: 37 KTASRSKNVSSGSPWYGPDRVKYLGPFSGEAPSYL 71 Score = 36.6 bits (83), Expect(2) = 5e-06 Identities = 18/31 (58%), Positives = 22/31 (70%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA+S A SSPSLAG+AV S +S I G+G Sbjct: 1 MASSTMALSSPSLAGQAVKLGSSVSNIVGEG 31 >ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum tuberosum] Length = 265 Score = 45.1 bits (105), Expect(2) = 5e-06 Identities = 29/45 (64%), Positives = 30/45 (66%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQDPDRVKCLGPFSGESPSYL 5 RITM +K VAK SS SS PDRVK LGPFSGESPSYL Sbjct: 32 RITM---RKAVAKSASS----SSPWYGPDRVKYLGPFSGESPSYL 69 Score = 30.8 bits (68), Expect(2) = 5e-06 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA + A SSPS AG+AV S S+I G G Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEITGNG 31 >ref|NP_564339.1| chlorophyll A/B binding protein 3 [Arabidopsis thaliana] gi|18397288|ref|NP_564340.1| chlorophyll A/B-binding protein 2 [Arabidopsis thaliana] gi|317374860|sp|P0CJ48.1|CB1A_ARATH RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic; AltName: Full=Chlorophyll a-b protein 165; Short=CAB-165; AltName: Full=LHCII type I CAB-2; Flags: Precursor gi|317374942|sp|Q8VZ87.2|CB1B_ARATH RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic; AltName: Full=Chlorophyll a-b protein 180; Short=CAB-180; AltName: Full=LHCII type I CAB-3; Flags: Precursor gi|9972354|gb|AAG10604.1|AC008030_4 chlorophyll a/b-binding protein [Arabidopsis thaliana] gi|9972355|gb|AAG10605.1|AC008030_5 chlorophyll a/b-binding protein [Arabidopsis thaliana] gi|16368|emb|CAA27540.1| chlorophyll a/b binding protein (LHCP AB 65) [Arabidopsis thaliana] gi|16372|emb|CAA27541.1| chlorophyll a/b binding protein (LHCP AB 180) [Arabidopsis thaliana] gi|15529226|gb|AAK97707.1| At1g29920/F1N18_80 [Arabidopsis thaliana] gi|15809862|gb|AAL06859.1| At1g29920/F1N18_80 [Arabidopsis thaliana] gi|16974375|gb|AAL31113.1| At1g29920/F1N18_80 [Arabidopsis thaliana] gi|17065476|gb|AAL32892.1| chlorophyll a/b-binding protein [Arabidopsis thaliana] gi|20148487|gb|AAM10134.1| chlorophyll a/b-binding protein [Arabidopsis thaliana] gi|21555860|gb|AAM63949.1| photosystem II type I chlorophyll a /b binding protein, putative [Arabidopsis thaliana] gi|22135932|gb|AAM91548.1| photosystem II type I chlorophyll a/b binding protein, putative [Arabidopsis thaliana] gi|23397170|gb|AAN31868.1| putative photosystem II type I chlorophyll a /b binding protein [Arabidopsis thaliana] gi|332193028|gb|AEE31149.1| chlorophyll A/B binding protein 3 [Arabidopsis thaliana] gi|332193029|gb|AEE31150.1| chlorophyll A/B-binding protein 2 [Arabidopsis thaliana] Length = 267 Score = 42.4 bits (98), Expect(2) = 6e-06 Identities = 26/45 (57%), Positives = 29/45 (64%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQDPDRVKCLGPFSGESPSYL 5 R+TM +K VAKPK + S DRVK LGPFSGESPSYL Sbjct: 32 RVTM---RKTVAKPKGPSGSPWYGS---DRVKYLGPFSGESPSYL 70 Score = 33.1 bits (74), Expect(2) = 6e-06 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA S A SSP+ AG+AVN S S++ G G Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSG 31 >gb|AAL38341.1| chlorophyll a/b-binding protein [Arabidopsis thaliana] gi|21387019|gb|AAM47913.1| chlorophyll a/b-binding protein [Arabidopsis thaliana] Length = 267 Score = 42.4 bits (98), Expect(2) = 6e-06 Identities = 26/45 (57%), Positives = 29/45 (64%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQDPDRVKCLGPFSGESPSYL 5 R+TM +K VAKPK + S DRVK LGPFSGESPSYL Sbjct: 32 RVTM---RKTVAKPKGPSGSPWYGS---DRVKYLGPFSGESPSYL 70 Score = 33.1 bits (74), Expect(2) = 6e-06 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA S A SSP+ AG+AVN S S++ G G Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSG 31 >dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein [Nicotiana sylvestris] Length = 265 Score = 44.7 bits (104), Expect(2) = 6e-06 Identities = 25/38 (65%), Positives = 27/38 (71%) Frame = -2 Query: 118 KKMVAKPKSSKTAVSSNSQDPDRVKCLGPFSGESPSYL 5 +K VAKP +S SS PDRVK LGPFSGESPSYL Sbjct: 36 RKTVAKPVAS----SSPWYGPDRVKYLGPFSGESPSYL 69 Score = 30.8 bits (68), Expect(2) = 6e-06 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA + A SSPS AG+AV S S+I G G Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEITGNG 31 >dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein [Nicotiana sylvestris] Length = 265 Score = 43.5 bits (101), Expect(2) = 6e-06 Identities = 24/38 (63%), Positives = 27/38 (71%) Frame = -2 Query: 118 KKMVAKPKSSKTAVSSNSQDPDRVKCLGPFSGESPSYL 5 +K VAKP +S SS PDRVK LGPFSGE+PSYL Sbjct: 36 RKTVAKPVAS----SSPWYGPDRVKYLGPFSGEAPSYL 69 Score = 32.0 bits (71), Expect(2) = 6e-06 Identities = 17/31 (54%), Positives = 19/31 (61%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA S A SSPS AG+AV S S+I G G Sbjct: 1 MAASTMALSSPSFAGQAVKLSPSASEITGNG 31 >gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum] Length = 267 Score = 43.1 bits (100), Expect(2) = 8e-06 Identities = 29/47 (61%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQ--DPDRVKCLGPFSGESPSYL 5 RITM +K K KS VSS+S PDRVK LGPFSGESPSYL Sbjct: 32 RITM---RKTAGKTKS----VSSDSPWYGPDRVKYLGPFSGESPSYL 71 Score = 32.0 bits (71), Expect(2) = 8e-06 Identities = 16/31 (51%), Positives = 21/31 (67%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA+S A SSPSLAG+ V + S+I G+G Sbjct: 1 MASSTMALSSPSLAGKMVKLAPTASEILGEG 31 >ref|XP_004303877.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 267 Score = 40.4 bits (93), Expect(2) = 8e-06 Identities = 24/45 (53%), Positives = 29/45 (64%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQDPDRVKCLGPFSGESPSYL 5 R+TM +K AK K+ + S PDRVK LGPFSGE+PSYL Sbjct: 32 RVTM---RKTAAKSKNVSSV--SPWYGPDRVKYLGPFSGEAPSYL 71 Score = 34.7 bits (78), Expect(2) = 8e-06 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA+S A SSPSLAG+AV S S + G+G Sbjct: 1 MASSTMALSSPSLAGQAVKLGSSTSNLLGEG 31 >dbj|BAA25388.1| light harvesting chlorophyll a/b-binding protein [Nicotiana sylvestris] Length = 265 Score = 44.3 bits (103), Expect(2) = 8e-06 Identities = 25/38 (65%), Positives = 26/38 (68%) Frame = -2 Query: 118 KKMVAKPKSSKTAVSSNSQDPDRVKCLGPFSGESPSYL 5 +K AKP SS SS PDRVK LGPFSGESPSYL Sbjct: 36 RKTAAKPVSS----SSPWYGPDRVKYLGPFSGESPSYL 69 Score = 30.8 bits (68), Expect(2) = 8e-06 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA + A SSPS AG+AV S S+I G G Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEITGNG 31 >gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum] Length = 265 Score = 43.1 bits (100), Expect(2) = 8e-06 Identities = 28/45 (62%), Positives = 29/45 (64%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQDPDRVKCLGPFSGESPSYL 5 RITM +K VAK S SS PDRVK LGPFSGESPSYL Sbjct: 32 RITM---RKAVAKSAPS----SSPWYGPDRVKYLGPFSGESPSYL 69 Score = 32.0 bits (71), Expect(2) = 8e-06 Identities = 17/31 (54%), Positives = 19/31 (61%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA S A SSPS AG+AV S S+I G G Sbjct: 1 MAASTMALSSPSFAGQAVKLSPSASEISGNG 31 >gb|AAA80593.1| chlorophyll a/b binding protein [Solanum tuberosum] Length = 265 Score = 43.1 bits (100), Expect(2) = 8e-06 Identities = 28/45 (62%), Positives = 29/45 (64%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQDPDRVKCLGPFSGESPSYL 5 RITM +K VAK S SS PDRVK LGPFSGESPSYL Sbjct: 32 RITM---RKAVAKSAPS----SSPWYGPDRVKYLGPFSGESPSYL 69 Score = 32.0 bits (71), Expect(2) = 8e-06 Identities = 17/31 (54%), Positives = 19/31 (61%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA S A SSPS AG+AV S S+I G G Sbjct: 1 MAASTMALSSPSFAGQAVKLSPSTSEITGNG 31 >gb|AAA80595.1| chlorophyll a/b binding protein, partial [Solanum tuberosum] Length = 135 Score = 43.1 bits (100), Expect(2) = 9e-06 Identities = 28/45 (62%), Positives = 29/45 (64%) Frame = -2 Query: 139 RITMLFQKKMVAKPKSSKTAVSSNSQDPDRVKCLGPFSGESPSYL 5 RITM +K VAK S SS PDRVK LGPFSGESPSYL Sbjct: 32 RITM---RKAVAKSAPS----SSPWYGPDRVKYLGPFSGESPSYL 69 Score = 32.0 bits (71), Expect(2) = 9e-06 Identities = 17/31 (54%), Positives = 19/31 (61%) Frame = -3 Query: 228 MATSITAFSSPSLAGEAVNHSSPISKIFGQG 136 MA S A SSPS AG+AV S S+I G G Sbjct: 1 MAASTMALSSPSFAGQAVKLSPSASEITGNG 31