BLASTX nr result
ID: Papaver27_contig00050963
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00050963
(546 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-contai... 118 8e-25
gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Mor... 115 5e-24
ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III s... 113 3e-23
ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III s... 112 8e-23
ref|XP_007218416.1| hypothetical protein PRUPE_ppa011518mg [Prun... 111 1e-22
ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III s... 110 2e-22
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s... 110 3e-22
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s... 109 4e-22
ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III s... 103 2e-20
ref|XP_002988954.1| hypothetical protein SELMODRAFT_128885 [Sela... 102 5e-20
ref|XP_001751839.1| predicted protein [Physcomitrella patens] gi... 102 6e-20
ref|XP_007134115.1| hypothetical protein PHAVU_010G020200g [Phas... 101 1e-19
ref|XP_003629061.1| DNA-directed RNA polymerase III subunit RPC8... 100 2e-19
gb|EYU46504.1| hypothetical protein MIMGU_mgv1a014157mg [Mimulus... 100 3e-19
ref|XP_004514743.1| PREDICTED: DNA-directed RNA polymerase III s... 100 4e-19
ref|XP_004515171.1| PREDICTED: DNA-directed RNA polymerase III s... 98 1e-18
ref|XP_006305915.1| hypothetical protein CARUB_v10011131mg [Caps... 98 1e-18
ref|XP_006396961.1| hypothetical protein EUTSA_v10028967mg [Eutr... 97 3e-18
ref|XP_003629059.1| DNA-directed RNA polymerase III subunit RPC8... 96 6e-18
ref|XP_002275475.2| PREDICTED: DNA-directed RNA polymerase III s... 96 8e-18
>ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-containing protein [Theobroma
cacao] gi|508702675|gb|EOX94571.1| RNA polymerase Rpb7
N-terminal domain-containing protein [Theobroma cacao]
Length = 210
Score = 118 bits (296), Expect = 8e-25
Identities = 55/99 (55%), Positives = 69/99 (69%), Gaps = 14/99 (14%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSAD------GRWTWMYGDVE--------LTIEQDDEIRFRV 142
GFF DI++PVHLLP PS+F +D GRW W +G+ E I+ D+I+FRV
Sbjct: 102 GFFDDIYIPVHLLPIPSRFESDPNNRNQGRWIWDFGEAEEAQSEEPRFVIDGMDQIKFRV 161
Query: 143 HKIAYPPIPLEQEKDSKAFAPMVITASIDFDGLGPISWW 259
H + YP IPLEQ ++SK FAPMVIT SID+DGLGP+SWW
Sbjct: 162 HSVIYPSIPLEQPENSKPFAPMVITGSIDYDGLGPVSWW 200
>gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Morus notabilis]
Length = 200
Score = 115 bits (289), Expect = 5e-24
Identities = 50/91 (54%), Positives = 67/91 (73%), Gaps = 6/91 (6%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADGR------WTWMYGDVELTIEQDDEIRFRVHKIAYPPI 166
GFF+DI++P + LP+PS+ D R W W +G+ + I+ +DEIRF+VH + YPPI
Sbjct: 102 GFFEDIYIPANFLPDPSRPEPDPRKRDRVTWIWEFGEQKYVIDGEDEIRFQVHSVNYPPI 161
Query: 167 PLEQEKDSKAFAPMVITASIDFDGLGPISWW 259
P+EQ K+SK FAPMVIT S+D DGLGP+SWW
Sbjct: 162 PVEQPKESKPFAPMVITGSLDCDGLGPVSWW 192
>ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Solanum lycopersicum]
Length = 193
Score = 113 bits (283), Expect = 3e-23
Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 6/92 (6%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADG------RWTWMYGDVELTIEQDDEIRFRVHKIAYPPI 166
GFF DI+VP LLP+PS+ D RW W + +++ I+ DEIRF+VH ++YP +
Sbjct: 102 GFFDDIYVPAPLLPDPSRSEPDPENKNQVRWIWKFDELDYPIDGIDEIRFQVHNVSYPSM 161
Query: 167 PLEQEKDSKAFAPMVITASIDFDGLGPISWWV 262
PLEQ+KDSK FAPMVI S+D DGLGPISWW+
Sbjct: 162 PLEQDKDSKPFAPMVIKGSLDADGLGPISWWI 193
>ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Solanum tuberosum]
Length = 193
Score = 112 bits (279), Expect = 8e-23
Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 6/92 (6%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADG------RWTWMYGDVELTIEQDDEIRFRVHKIAYPPI 166
GFF DI+VP LLP+PS+ + D RW W + +++ I+ DEIRF+VH ++YP +
Sbjct: 102 GFFDDIYVPAPLLPDPSRSAPDPENKNQVRWIWKFDELDYPIDGVDEIRFQVHNVSYPSM 161
Query: 167 PLEQEKDSKAFAPMVITASIDFDGLGPISWWV 262
PLEQ+KDS FAPMVI S+D DGLGPISWW+
Sbjct: 162 PLEQDKDSNPFAPMVIKGSLDADGLGPISWWI 193
>ref|XP_007218416.1| hypothetical protein PRUPE_ppa011518mg [Prunus persica]
gi|462414878|gb|EMJ19615.1| hypothetical protein
PRUPE_ppa011518mg [Prunus persica]
Length = 207
Score = 111 bits (278), Expect = 1e-22
Identities = 53/93 (56%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
Frame = +2
Query: 8 FFKDIFVPVHLLPNPSKFSADG------RWTWMY--GDVELTIEQDDEIRFRVHKIAYPP 163
FF DI+VPVHLLP PS D W W + D EL I+ D+I+F+VH + +PP
Sbjct: 103 FFDDIYVPVHLLPVPSHSVPDPGKRDRVMWIWKFPDSDEELVIDGIDQIKFQVHSVNFPP 162
Query: 164 IPLEQEKDSKAFAPMVITASIDFDGLGPISWWV 262
IP+EQ +DSK FAPMV+T SIDFDGLGP+SWWV
Sbjct: 163 IPIEQPEDSKPFAPMVVTGSIDFDGLGPVSWWV 195
>ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
isoform X1 [Citrus sinensis]
gi|568851835|ref|XP_006479591.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like isoform X2 [Citrus
sinensis]
Length = 192
Score = 110 bits (276), Expect = 2e-22
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADG------RWTWMYGDVELTIEQDDEIRFRVHKIAYPPI 166
GFF+DI+VP HLLP+PS+ D +W W +GD + I+ DEI+FRV + YP I
Sbjct: 102 GFFEDIYVPSHLLPSPSRSEPDPYGRYEVKWIWEFGDTKYVIDGLDEIKFRVLSVNYPSI 161
Query: 167 PLEQEKDSKAFAPMVITASIDFDGLGPISWW 259
P+EQ + SK FAPMVI SID+DGLGP+SWW
Sbjct: 162 PIEQAEGSKPFAPMVINGSIDYDGLGPVSWW 192
>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 110 bits (274), Expect = 3e-22
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 6/91 (6%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADGR------WTWMYGDVELTIEQDDEIRFRVHKIAYPPI 166
GFF DI++PVHL+PNP D W W Y + + I+ DEIRF+V ++YPPI
Sbjct: 102 GFFDDIYIPVHLMPNPCHCEPDPENKSQVIWIWDYQEQKFPIDGLDEIRFQVQSVSYPPI 161
Query: 167 PLEQEKDSKAFAPMVITASIDFDGLGPISWW 259
P+EQ K+SK FAPM+I S+D+DGLGP+SWW
Sbjct: 162 PVEQPKESKPFAPMMIMGSLDYDGLGPVSWW 192
>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 109 bits (273), Expect = 4e-22
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 6/91 (6%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADGR------WTWMYGDVELTIEQDDEIRFRVHKIAYPPI 166
GFF DI++PVHL+PNP + W W Y + + I+ DEIRF+V ++YPPI
Sbjct: 102 GFFDDIYIPVHLMPNPCHCEPNPEKKGQVIWIWDYQEQKFPIDGIDEIRFQVQSVSYPPI 161
Query: 167 PLEQEKDSKAFAPMVITASIDFDGLGPISWW 259
P+EQ K+SK FAPMVI S+D+DGLGP+SWW
Sbjct: 162 PVEQPKESKPFAPMVIMGSLDYDGLGPVSWW 192
>ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Cucumis sativus] gi|449523449|ref|XP_004168736.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC8-like [Cucumis sativus]
Length = 226
Score = 103 bits (258), Expect = 2e-20
Identities = 52/107 (48%), Positives = 67/107 (62%), Gaps = 22/107 (20%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADG------RWTWMYGDVELTIEQDDEIRFRVHKIAYPPI 166
GFF+DI+VPV L+P+ S+F+ D RW W+Y +V I + DEI+F+VH I YP I
Sbjct: 102 GFFEDIYVPVELMPSGSEFTPDENNGGRCRWVWIYNEVPFDIYESDEIKFKVHSIEYPAI 161
Query: 167 PLEQEKDS----------------KAFAPMVITASIDFDGLGPISWW 259
+EQ K+S K FAPMVITAS+D DGLGP+SWW
Sbjct: 162 LVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQDGLGPVSWW 208
>ref|XP_002988954.1| hypothetical protein SELMODRAFT_128885 [Selaginella moellendorffii]
gi|300143291|gb|EFJ09983.1| hypothetical protein
SELMODRAFT_128885 [Selaginella moellendorffii]
Length = 187
Score = 102 bits (255), Expect = 5e-20
Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADGR-WTWMYGDVELTIEQDDEIRFRVHKIAYPPIPLEQE 181
GFF+DI VP H L PSKF + + W W Y + E+ ++ ++E+RFRV K+ YPPIPLEQE
Sbjct: 102 GFFEDIIVPHHQLQQPSKFDENEKLWVWNYQENEMFMDLEEEVRFRVLKVRYPPIPLEQE 161
Query: 182 KDSKAFAPMVITASIDFDGLGPISWW 259
+D++ FAPM + I+ DGLG +SWW
Sbjct: 162 RDAQPFAPMEVIGDINSDGLGLVSWW 187
>ref|XP_001751839.1| predicted protein [Physcomitrella patens]
gi|162696937|gb|EDQ83274.1| predicted protein
[Physcomitrella patens]
Length = 189
Score = 102 bits (254), Expect = 6e-20
Identities = 42/85 (49%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = +2
Query: 8 FFKDIFVPVHLLPNPSKFSADGR-WTWMYGDVELTIEQDDEIRFRVHKIAYPPIPLEQEK 184
FF+DI +P HLL PSKF + + W W Y ++ ++ ++++RFRV ++ YPPIP+EQEK
Sbjct: 104 FFEDIHIPEHLLQQPSKFDEEEKLWIWNYNGADMFMDLEEDVRFRVVQVKYPPIPIEQEK 163
Query: 185 DSKAFAPMVITASIDFDGLGPISWW 259
D++ FAPM IT I+ DGLG ++WW
Sbjct: 164 DARPFAPMAITGDINADGLGLVAWW 188
>ref|XP_007134115.1| hypothetical protein PHAVU_010G020200g [Phaseolus vulgaris]
gi|561007160|gb|ESW06109.1| hypothetical protein
PHAVU_010G020200g [Phaseolus vulgaris]
Length = 215
Score = 101 bits (252), Expect = 1e-19
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 19/104 (18%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSAD-------------------GRWTWMYGDVELTIEQDDE 127
GFF+DI+VP H +P P+ F D G W W + + E I++ D
Sbjct: 102 GFFEDIYVPAHHMPYPNHFVEDEQGKRVSSSEESTTNSVRKGVWYWDFNEQEYPIQETDV 161
Query: 128 IRFRVHKIAYPPIPLEQEKDSKAFAPMVITASIDFDGLGPISWW 259
I+FRV ++YP IP+EQ K+SK FAPM++T S+D DGLGP+SWW
Sbjct: 162 IKFRVQNVSYPQIPVEQPKESKPFAPMLVTGSLDHDGLGPVSWW 205
>ref|XP_003629061.1| DNA-directed RNA polymerase III subunit RPC8 [Medicago truncatula]
gi|355523083|gb|AET03537.1| DNA-directed RNA polymerase
III subunit RPC8 [Medicago truncatula]
Length = 191
Score = 100 bits (249), Expect = 2e-19
Identities = 45/90 (50%), Positives = 63/90 (70%), Gaps = 5/90 (5%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADG---RWTWMYGDV--ELTIEQDDEIRFRVHKIAYPPIP 169
GFF+DI++P H +P PS + + +WTW YG+ E IE +EIRF+V ++YP IP
Sbjct: 101 GFFEDIYIPTHHMPYPSYYISKNNTRKWTWEYGEETDEFNIEISNEIRFQVLSVSYPTIP 160
Query: 170 LEQEKDSKAFAPMVITASIDFDGLGPISWW 259
+EQ K+SK FAPMV+ S+ +GLGP+SWW
Sbjct: 161 VEQAKESKPFAPMVVNGSLYHEGLGPVSWW 190
>gb|EYU46504.1| hypothetical protein MIMGU_mgv1a014157mg [Mimulus guttatus]
Length = 199
Score = 100 bits (248), Expect = 3e-19
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 13/98 (13%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADGR------WTWMYGDVELTIEQDDEIRFRVHKIAYPPI 166
GFF DI+V V LLP P+ ++ D W+W Y LTI+ DEIRF+VH + Y PI
Sbjct: 102 GFFDDIYVYVPLLPAPNDYAPDPSRKDGVIWSWNYHADPLTIDWTDEIRFKVHSVNYHPI 161
Query: 167 PLEQ-------EKDSKAFAPMVITASIDFDGLGPISWW 259
P+EQ +KDSK FAPMV+ SID DGLGP+SWW
Sbjct: 162 PVEQGDDDDPEKKDSKPFAPMVVIGSIDDDGLGPVSWW 199
>ref|XP_004514743.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Cicer
arietinum]
Length = 196
Score = 99.8 bits (247), Expect = 4e-19
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 10/95 (10%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSA-DGR------WTWMYGDVE---LTIEQDDEIRFRVHKIA 154
GFF DI++P H +PNPS F G+ W W Y E I+ DEI+F+V ++
Sbjct: 102 GFFDDIYIPTHHMPNPSHFDPIPGKSNKSVVWFWDYKKEEGLSYPIDSSDEIKFQVQSVS 161
Query: 155 YPPIPLEQEKDSKAFAPMVITASIDFDGLGPISWW 259
YPPIP+EQ K+SK FAPM++ S+D DGLGP+SWW
Sbjct: 162 YPPIPVEQPKESKPFAPMLVYGSLDQDGLGPVSWW 196
>ref|XP_004515171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
isoform X1 [Cicer arietinum]
gi|502172669|ref|XP_004515172.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like isoform X2 [Cicer
arietinum]
Length = 196
Score = 98.2 bits (243), Expect = 1e-18
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 10/95 (10%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSA-DGR------WTWMYGDVE---LTIEQDDEIRFRVHKIA 154
GFF DI++P H +PNPS F G+ W W + E I+ DEI+F+V ++
Sbjct: 102 GFFDDIYIPTHHMPNPSHFDPMPGKSNKSVVWFWDFKKEEGLSYPIDSSDEIKFQVQSVS 161
Query: 155 YPPIPLEQEKDSKAFAPMVITASIDFDGLGPISWW 259
YPPIP+EQ K+SK FAPM++ S+D DGLGP+SWW
Sbjct: 162 YPPIPVEQPKESKPFAPMLVYGSLDQDGLGPVSWW 196
>ref|XP_006305915.1| hypothetical protein CARUB_v10011131mg [Capsella rubella]
gi|482574626|gb|EOA38813.1| hypothetical protein
CARUB_v10011131mg [Capsella rubella]
Length = 199
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 6/91 (6%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADG------RWTWMYGDVELTIEQDDEIRFRVHKIAYPPI 166
GFF+DI+VPV L+P P++ D RW W++ E I+ +I+FRV I+YP +
Sbjct: 102 GFFEDIYVPVPLIPTPNRCEPDPYNRKQMRWVWVFEGQEYIIDDSCQIKFRVEGISYPSV 161
Query: 167 PLEQEKDSKAFAPMVITASIDFDGLGPISWW 259
P+E+ +D+K FAPMVIT +ID DGLG +SWW
Sbjct: 162 PIERAEDAKPFAPMVITGNIDDDGLGLVSWW 192
>ref|XP_006396961.1| hypothetical protein EUTSA_v10028967mg [Eutrema salsugineum]
gi|557097978|gb|ESQ38414.1| hypothetical protein
EUTSA_v10028967mg [Eutrema salsugineum]
Length = 204
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/93 (47%), Positives = 62/93 (66%), Gaps = 8/93 (8%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADG------RWTWMYGDV--ELTIEQDDEIRFRVHKIAYP 160
GFF+DI+VP L+P P++ D RW W +G+ + I+ +I+FRV I+YP
Sbjct: 102 GFFEDIYVPAPLIPTPNRCEPDPYNRNQMRWVWEFGEPKEDYIIDDSCQIKFRVESISYP 161
Query: 161 PIPLEQEKDSKAFAPMVITASIDFDGLGPISWW 259
+P+E+ + SK FAPMVIT +ID DGLGP+SWW
Sbjct: 162 TVPIERTEGSKPFAPMVITGNIDDDGLGPVSWW 194
>ref|XP_003629059.1| DNA-directed RNA polymerase III subunit RPC8 [Medicago truncatula]
gi|355523081|gb|AET03535.1| DNA-directed RNA polymerase
III subunit RPC8 [Medicago truncatula]
Length = 220
Score = 95.9 bits (237), Expect = 6e-18
Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 6/91 (6%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADG---RWTWMYGDV--ELTIEQDDE-IRFRVHKIAYPPI 166
GFF+DI++P H +P PS + + +WTW YG+ E IE +E IRF+V ++YP I
Sbjct: 129 GFFEDIYIPTHHMPYPSYYISKNNTRKWTWEYGEETDEFNIEISNEVIRFQVLSVSYPTI 188
Query: 167 PLEQEKDSKAFAPMVITASIDFDGLGPISWW 259
P+EQ K+SK FAPMV+ S+ +GLGP+SWW
Sbjct: 189 PVEQAKESKPFAPMVVNGSLYHEGLGPVSWW 219
>ref|XP_002275475.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
vinifera]
Length = 177
Score = 95.5 bits (236), Expect = 8e-18
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 6/91 (6%)
Frame = +2
Query: 5 GFFKDIFVPVHLLPNPSKFSADGR------WTWMYGDVELTIEQDDEIRFRVHKIAYPPI 166
GFF+D++ VHL+PNPS+ + W W + + I+ D+IRF+V ++Y P+
Sbjct: 87 GFFEDVYRLVHLMPNPSRCEPNPYSRSQVIWIWDNQEQKFPIDGMDKIRFQVQSVSYSPV 146
Query: 167 PLEQEKDSKAFAPMVITASIDFDGLGPISWW 259
P+EQ K+SK FAPMVI S+D+DGL P+SWW
Sbjct: 147 PVEQPKESKPFAPMVILGSLDYDGLSPVSWW 177