BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00049527
         (968 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264670.1| PREDICTED: uncharacterized protein LOC100245...   175   2e-41
ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis tha...   173   8e-41
ref|XP_006401381.1| hypothetical protein EUTSA_v10013799mg [Eutr...   169   2e-39
gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]   169   2e-39
ref|XP_004305883.1| PREDICTED: uncharacterized protein LOC101307...   167   4e-39
ref|XP_006292441.1| hypothetical protein CARUB_v10018659mg [Caps...   166   1e-38
ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyr...   162   2e-37
ref|XP_006347729.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   152   2e-34
gb|EXC35009.1| DNA topoisomerase 3-alpha [Morus notabilis]            149   1e-33
ref|XP_004147743.1| PREDICTED: uncharacterized protein LOC101213...   143   9e-32
ref|XP_004230079.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   142   2e-31
ref|XP_002520597.1| hypothetical protein RCOM_0673560 [Ricinus c...   142   2e-31
ref|XP_007214869.1| hypothetical protein PRUPE_ppa020564mg [Prun...   137   5e-30
gb|EEC76291.1| hypothetical protein OsI_13802 [Oryza sativa Indi...   134   7e-29
ref|NP_001051489.1| Os03g0786500 [Oryza sativa Japonica Group] g...   134   7e-29
ref|XP_004981536.1| PREDICTED: DNA-binding protein HEXBP-like [S...   131   4e-28
ref|XP_003558095.1| PREDICTED: uncharacterized protein LOC100838...   129   1e-27
ref|XP_006651886.1| PREDICTED: DNA topoisomerase 3-alpha-like [O...   125   3e-26
dbj|BAJ93454.1| predicted protein [Hordeum vulgare subsp. vulgare]    124   4e-26
ref|XP_002463774.1| hypothetical protein SORBIDRAFT_01g005940 [S...   120   1e-24

>ref|XP_002264670.1| PREDICTED: uncharacterized protein LOC100245024 [Vitis vinifera]
           gi|296084189|emb|CBI24577.3| unnamed protein product
           [Vitis vinifera]
          Length = 296

 Score =  175 bits (444), Expect = 2e-41
 Identities = 102/247 (41%), Positives = 113/247 (45%), Gaps = 7/247 (2%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFYKCP+R+ENGGCGFF+WCDN                  N+S  DL CPCGAGSCL+L
Sbjct: 115 RKFYKCPLREENGGCGFFQWCDNSSGISNDAFG--AINPGLNSSFPDLKCPCGAGSCLIL 172

Query: 185 TAKTGNNVGQQFYRCP-NQVSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXXX 361
           TAKTGNN GQQFYRCP NQ   CGFFKWCN Q +  G         N             
Sbjct: 173 TAKTGNNAGQQFYRCPANQGGSCGFFKWCNDQTVPAGLPVGASRGYN------------- 219

Query: 362 XXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYNQTSNLDT 541
                             AS KSY A SG S                             
Sbjct: 220 --------------TTTNASIKSYGAQSGSS----------------------------- 236

Query: 542 ANSKNFSGSSDICFKCGLDGHWAKDC---PAKPSVIVGGN--SLGSCYKCGGSGHWAKDC 706
                       CFKCG +GHWAKDC     +P    GG   S G+CYKCG  GHWA+DC
Sbjct: 237 ------------CFKCGKEGHWAKDCQMPSPEPLADSGGRPASSGTCYKCGKPGHWARDC 284

Query: 707 -TGQDVK 724
            + QD K
Sbjct: 285 SSSQDTK 291


>ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
           gi|7529257|emb|CAB86673.1| putative protein [Arabidopsis
           thaliana] gi|17529084|gb|AAL38752.1| unknown protein
           [Arabidopsis thaliana] gi|22136980|gb|AAM91719.1|
           unknown protein [Arabidopsis thaliana]
           gi|332644235|gb|AEE77756.1| CCHC-type zinc knuckle
           protein [Arabidopsis thaliana]
          Length = 372

 Score =  173 bits (439), Expect = 8e-41
 Identities = 92/244 (37%), Positives = 118/244 (48%), Gaps = 7/244 (2%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFYKCP R+ENGGCGFF+WCD              + + ++T   D  CPCGAG C VL
Sbjct: 116 RKFYKCPNREENGGCGFFQWCDAVQSSGTSTTTSNSYGNGNDTKFPDHQCPCGAGLCRVL 175

Query: 185 TAKTGNNVGQQFYRCPNQVSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXXXX 364
           TAKTG NVG+QFYRCP     CGFFKWCN   ++     S   N+N              
Sbjct: 176 TAKTGENVGRQFYRCPVFEGSCGFFKWCNDNVVSSPTSYSVTKNSNFG------------ 223

Query: 365 XXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYNQTSNLDTA 544
                            +  + Y  A   +P    +  G+        +  + T   DT 
Sbjct: 224 ----------------DSDTRGYQNAKTGTP---CYKCGKEG-----HWARDCTVQSDTG 259

Query: 545 NSKNFSGSSDICFKCGLDGHWAKDCPA-------KPSVIVGGNSLGSCYKCGGSGHWAKD 703
             K+ S + D CFKCG  GHW++DC A       +P  +   +S G CYKCG  GHW++D
Sbjct: 260 PVKSTSAAGD-CFKCGKPGHWSRDCTAQSGNPKYEPGQMKSSSSSGECYKCGKQGHWSRD 318

Query: 704 CTGQ 715
           CTGQ
Sbjct: 319 CTGQ 322



 Score =  108 bits (271), Expect = 2e-21
 Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 6/194 (3%)
 Frame = +2

Query: 152 CPCGAGSCLVLTAKTGNNVGQQFYRCPNQVSQ--CGFFKWCNQQNIAIGQRTSYLDNANX 325
           CPCG G CL+LT+ T  N G++FY+CPN+     CGFF+WC+         TS   + + 
Sbjct: 96  CPCGVGICLILTSNTPKNPGRKFYKCPNREENGGCGFFQWCDAVQ---SSGTSTTTSNSY 152

Query: 326 XXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSAT 505
                                       +    + Y     +           N  SS T
Sbjct: 153 GNGNDTKFPDHQCPCGAGLCRVLTAKTGENVGRQFYRCPVFEGSCGFFKWCNDNVVSSPT 212

Query: 506 SYTYNQTSNLDTANSKNFSG--SSDICFKCGLDGHWAKDCPAKPSV--IVGGNSLGSCYK 673
           SY+  + SN   ++++ +    +   C+KCG +GHWA+DC  +     +   ++ G C+K
Sbjct: 213 SYSVTKNSNFGDSDTRGYQNAKTGTPCYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFK 272

Query: 674 CGGSGHWAKDCTGQ 715
           CG  GHW++DCT Q
Sbjct: 273 CGKPGHWSRDCTAQ 286


>ref|XP_006401381.1| hypothetical protein EUTSA_v10013799mg [Eutrema salsugineum]
           gi|557102471|gb|ESQ42834.1| hypothetical protein
           EUTSA_v10013799mg [Eutrema salsugineum]
          Length = 384

 Score =  169 bits (428), Expect = 2e-39
 Identities = 90/258 (34%), Positives = 119/258 (46%), Gaps = 7/258 (2%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFYKCP R+ENGGCGFF+WCD              + + + +   D  CPCGAG C VL
Sbjct: 123 RKFYKCPNREENGGCGFFQWCDAVQSSGTQPGTHHSYGNTNESKFPDHQCPCGAGLCRVL 182

Query: 185 TAKTGNNVGQQFYRCPNQVSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXXXX 364
           TAKTG N+G+QFYRCP     CGFFKWCN   ++     S+  ++N              
Sbjct: 183 TAKTGENIGRQFYRCPVFEGSCGFFKWCNDDAVSSATTYSFTKSSNFG------------ 230

Query: 365 XXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYNQTSNLDTA 544
                            +  + Y  A   +P       G + A   T+ + N  S     
Sbjct: 231 ----------------ESDTRGYQTAKTGTPCYKCGKEG-HWARDCTAQSVNPLSETGPV 273

Query: 545 NSKNFSGSSDICFKCGLDGHWAKDCP-------AKPSVIVGGNSLGSCYKCGGSGHWAKD 703
            S + +G    C+KCG  GHWA+DC        ++   +   +S G CYKCG  GHWA+D
Sbjct: 274 KSSSAAGD---CYKCGKQGHWARDCTSQSGNLNSEAGQVKPSSSGGDCYKCGKPGHWARD 330

Query: 704 CTGQDVKNGNGSRSGPAS 757
           CT Q       S  G A+
Sbjct: 331 CTAQSGNQQFQSGQGKAA 348



 Score =  112 bits (279), Expect = 3e-22
 Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
 Frame = +2

Query: 152 CPCGAGSCLVLTAKTGNNVGQQFYRCPNQVSQ--CGFFKWCNQQNIAIGQRTSYLDNANX 325
           CPCG G CL+LT+ T  N G++FY+CPN+     CGFF+WC+    +  Q  ++    N 
Sbjct: 103 CPCGVGVCLILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTQPGTHHSYGN- 161

Query: 326 XXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSAT 505
                                       +    + Y     +           ++ SSAT
Sbjct: 162 --TNESKFPDHQCPCGAGLCRVLTAKTGENIGRQFYRCPVFEGSCGFFKWCNDDAVSSAT 219

Query: 506 SYTYNQTSNLDTANSKNF--SGSSDICFKCGLDGHWAKDCPA-------KPSVIVGGNSL 658
           +Y++ ++SN   ++++ +  + +   C+KCG +GHWA+DC A       +   +   ++ 
Sbjct: 220 TYSFTKSSNFGESDTRGYQTAKTGTPCYKCGKEGHWARDCTAQSVNPLSETGPVKSSSAA 279

Query: 659 GSCYKCGGSGHWAKDCTGQ 715
           G CYKCG  GHWA+DCT Q
Sbjct: 280 GDCYKCGKQGHWARDCTSQ 298


>gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]
          Length = 369

 Score =  169 bits (427), Expect = 2e-39
 Identities = 92/244 (37%), Positives = 114/244 (46%), Gaps = 7/244 (2%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFYKCP R+ENGGCGFF+WCD              ++S       D  CPCGAG C VL
Sbjct: 112 RKFYKCPNREENGGCGFFQWCDAVQSSGTTHSYGNTNDS----KFPDHQCPCGAGLCRVL 167

Query: 185 TAKTGNNVGQQFYRCPNQVSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXXXX 364
           TAKTG NVG+QFYRCP     CGFFKWCN   ++     S   N+N              
Sbjct: 168 TAKTGENVGRQFYRCPVFEGSCGFFKWCNDDAVSAPTSYSVTKNSNLG------------ 215

Query: 365 XXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYNQTSNLDTA 544
                            +  + Y  A   +P       G + A   T  +    S +   
Sbjct: 216 ----------------DSDTRGYQIAKTGTPCYKCGKEG-HWARDCTLQSPIPPSEMGPV 258

Query: 545 NSKNFSGSSDICFKCGLDGHWAKDCPA-------KPSVIVGGNSLGSCYKCGGSGHWAKD 703
            S + +G    C+KCG  GHWA+DC A       +P  +   +S G CYKCG  GHWA+D
Sbjct: 259 RSTSAAGE---CYKCGKQGHWARDCTAQSGNPTYEPGKVKSSSSSGECYKCGKQGHWARD 315

Query: 704 CTGQ 715
           CTGQ
Sbjct: 316 CTGQ 319



 Score =  111 bits (277), Expect = 5e-22
 Identities = 65/200 (32%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
 Frame = +2

Query: 152 CPCGAGSCLVLTAKTGNNVGQQFYRCPNQVSQ--CGFFKWCNQQNIAIGQRTSYLDNANX 325
           CPCG G CL+LT+ T  N G++FY+CPN+     CGFF+WC+    + G   SY  N N 
Sbjct: 92  CPCGVGLCLILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQ-SSGTTHSY-GNTND 149

Query: 326 XXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSA- 502
                                       Q      +  + G       F    + A SA 
Sbjct: 150 SKFPDHQCPCGAGLCRVLTAKTGENVGRQFYRCPVFEGSCG------FFKWCNDDAVSAP 203

Query: 503 TSYTYNQTSNLDTANSKNF--SGSSDICFKCGLDGHWAKDC-------PAKPSVIVGGNS 655
           TSY+  + SNL  ++++ +  + +   C+KCG +GHWA+DC       P++   +   ++
Sbjct: 204 TSYSVTKNSNLGDSDTRGYQIAKTGTPCYKCGKEGHWARDCTLQSPIPPSEMGPVRSTSA 263

Query: 656 LGSCYKCGGSGHWAKDCTGQ 715
            G CYKCG  GHWA+DCT Q
Sbjct: 264 AGECYKCGKQGHWARDCTAQ 283


>ref|XP_004305883.1| PREDICTED: uncharacterized protein LOC101307328 [Fragaria vesca
           subsp. vesca]
          Length = 434

 Score =  167 bits (424), Expect = 4e-39
 Identities = 97/245 (39%), Positives = 114/245 (46%), Gaps = 11/245 (4%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXX-----RVHESASNTSVADLPCPCGAG 169
           RKFYKCP+RQENGGCGFFEWCDN                R    AS+++   L CPCG G
Sbjct: 252 RKFYKCPLRQENGGCGFFEWCDNASGANAMAGAGSGGFSRTQNYASDSTFTPLECPCGGG 311

Query: 170 SCLVLTAKTGNNVGQQFYRCP-NQVSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXX 346
            C +LTAKTGNN+G QFYRCP N+ S CGFFKWCN+  +A                    
Sbjct: 312 QCRILTAKTGNNIGSQFYRCPGNEGSSCGFFKWCNENTVA-------------------- 351

Query: 347 XXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYNQT 526
                                         A S Q         G + ASS  SY     
Sbjct: 352 ------------------------------AGSAQGARIPKAVYGSSEASSQGSYGVK-- 379

Query: 527 SNLDTANSKNFSGSSDICFKCGLDGHWAKDCPAKPS---VIVGGNSL--GSCYKCGGSGH 691
                      +GSS  C+KCG +GHWA+DC    +   V  GG S   GSCYKCG +GH
Sbjct: 380 -----------TGSS--CYKCGKEGHWARDCSGPSNNAQVEFGGRSTSTGSCYKCGKTGH 426

Query: 692 WAKDC 706
           WA+DC
Sbjct: 427 WARDC 431


>ref|XP_006292441.1| hypothetical protein CARUB_v10018659mg [Capsella rubella]
           gi|482561148|gb|EOA25339.1| hypothetical protein
           CARUB_v10018659mg [Capsella rubella]
          Length = 433

 Score =  166 bits (421), Expect = 1e-38
 Identities = 95/259 (36%), Positives = 124/259 (47%), Gaps = 22/259 (8%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFYKCP R+ENGGCGFF+WCD              + + +++   D  CPCGAG C VL
Sbjct: 115 RKFYKCPNREENGGCGFFQWCD----AVQSSGTSHSYGNNNDSKFPDHQCPCGAGLCRVL 170

Query: 185 TAKTGNNVGQQFYRCPNQVSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXXXX 364
           TAKTG NVG+QFYRCP     CGFFKWCN  +++     S  +N+N              
Sbjct: 171 TAKTGENVGRQFYRCPVFEGSCGFFKWCNDDSVSASTTYSVTNNSN-------ICESDTR 223

Query: 365 XXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYN-------- 520
                        C +             +P+  +   G+  ++SAT   Y         
Sbjct: 224 GYQTAKTGTPCYKCGKEGHWARDCTVQSGNPLPET---GQLKSTSATGDCYKCGKQGHWA 280

Query: 521 -----QTSNL--DTANSKNFSGSSDICFKCGLDGHWAKDCPA-------KPSVIVGGNSL 658
                Q+ NL  +T   K+ S + D C+KCG  GHWA+DC A       +P      +S 
Sbjct: 281 RDCTVQSGNLLPETGQLKSTSATGD-CYKCGKQGHWARDCTAQSGNPTYEPGQGKSSSSS 339

Query: 659 GSCYKCGGSGHWAKDCTGQ 715
             CYKCG  GHWA+DCTGQ
Sbjct: 340 VECYKCGKHGHWARDCTGQ 358



 Score =  107 bits (268), Expect = 6e-21
 Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
 Frame = +2

Query: 152 CPCGAGSCLVLTAKTGNNVGQQFYRCPNQVSQ--CGFFKWCNQQNIAIGQRTSYLDNANX 325
           CPCG G CLVLT+ T  N G++FY+CPN+     CGFF+WC+    + G   SY +N + 
Sbjct: 95  CPCGVGLCLVLTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSS-GTSHSYGNNNDS 153

Query: 326 XXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSAT 505
                                       +    + Y     +           +S S++T
Sbjct: 154 KFPDHQCPCGAGLCRVLTAKT------GENVGRQFYRCPVFEGSCGFFKWCNDDSVSAST 207

Query: 506 SYTYNQTSNLDTANSKNF--SGSSDICFKCGLDGHWAKDCPA-------KPSVIVGGNSL 658
           +Y+    SN+  ++++ +  + +   C+KCG +GHWA+DC         +   +   ++ 
Sbjct: 208 TYSVTNNSNICESDTRGYQTAKTGTPCYKCGKEGHWARDCTVQSGNPLPETGQLKSTSAT 267

Query: 659 GSCYKCGGSGHWAKDCTGQDVKNGN 733
           G CYKCG  GHWA+DCT   V++GN
Sbjct: 268 GDCYKCGKQGHWARDCT---VQSGN 289



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 68/259 (26%), Positives = 92/259 (35%), Gaps = 24/259 (9%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXX----RVHESASN---TSVADLPC-PC 160
           R+FY+CPV +  G CGFF+WC++                + ES +    T+    PC  C
Sbjct: 180 RQFYRCPVFE--GSCGFFKWCNDDSVSASTTYSVTNNSNICESDTRGYQTAKTGTPCYKC 237

Query: 161 G-----AGSCLVLTAKTGNNVGQQFYRCPNQVSQCGFFKWCNQQNIAIGQRTSYLDNANX 325
           G     A  C V +       GQ         S  G    C +Q       T    N   
Sbjct: 238 GKEGHWARDCTVQSGNPLPETGQL-----KSTSATGDCYKCGKQGHWARDCTVQSGNLLP 292

Query: 326 XXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRS--SFNVGRNS--A 493
                                     C   + N +Y    G+S   S   +  G++   A
Sbjct: 293 ETGQLKSTSATGDCYKCGKQGHWARDCTAQSGNPTYEPGQGKSSSSSVECYKCGKHGHWA 352

Query: 494 SSATSYTYNQTSNLDTANSKNFSGSSDICFKCGLDGHWAKDCPAKPS-------VIVGGN 652
              T  + NQ        S + S + D C+KCG  GHWA+DC  +               
Sbjct: 353 RDCTGQSGNQQFQSGQVKSTSPSAAGD-CYKCGKPGHWARDCTGQSGNQQFQSGQAKSTT 411

Query: 653 SLGSCYKCGGSGHWAKDCT 709
           S   CYKCG  GHWA+DCT
Sbjct: 412 SARDCYKCGKPGHWARDCT 430


>ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321433|gb|EFH51854.1| zinc knuckle family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 337

 Score =  162 bits (410), Expect = 2e-37
 Identities = 90/242 (37%), Positives = 111/242 (45%), Gaps = 7/242 (2%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFYKCP R+ENGGCGFF+WCD              + + +++   D  CPCGAG C VL
Sbjct: 115 RKFYKCPNREENGGCGFFQWCD---AVQSSGTTTHSYGNTNDSKFPDHQCPCGAGLCRVL 171

Query: 185 TAKTGNNVGQQFYRCPNQVSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXXXX 364
           TAKTG NVG+QFYRCP     CGFFKWCN   ++     S   N+N              
Sbjct: 172 TAKTGENVGRQFYRCPVFEGSCGFFKWCNDNAVSSPTSYSVTKNSNLG------------ 219

Query: 365 XXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYNQTSNLDTA 544
                            +  + Y  A   +P       G + A   T+ + N T      
Sbjct: 220 ----------------DSDTRGYQTAKTGAPCYKCGKEG-HWARDCTAQSGNPTYEAGQV 262

Query: 545 NSKNFSGSSDICFKCGLDGHWAKDCPAKPS-------VIVGGNSLGSCYKCGGSGHWAKD 703
            S + SG    C+KCG  GHWAKDC  +               S G CYKCG  GHWA+D
Sbjct: 263 KSSSSSGE---CYKCGKQGHWAKDCTGQSGDPQFQSRQAKSTTSGGDCYKCGKPGHWARD 319

Query: 704 CT 709
           CT
Sbjct: 320 CT 321



 Score =  119 bits (298), Expect = 2e-24
 Identities = 69/199 (34%), Positives = 95/199 (47%), Gaps = 11/199 (5%)
 Frame = +2

Query: 152 CPCGAGSCLVLTAKTGNNVGQQFYRCPNQVSQ--CGFFKWCNQQNIAIGQRTSYLDNANX 325
           CPCG G CLVLT+ T  N G++FY+CPN+     CGFF+WC+    + G  T    N N 
Sbjct: 95  CPCGVGLCLVLTSTTPKNPGRKFYKCPNREENGGCGFFQWCDAVQSS-GTTTHSYGNTND 153

Query: 326 XXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSAT 505
                                       Q      +  + G     +      N+ SS T
Sbjct: 154 SKFPDHQCPCGAGLCRVLTAKTGENVGRQFYRCPVFEGSCGFFKWCND-----NAVSSPT 208

Query: 506 SYTYNQTSNLDTANSKNFSGSSD--ICFKCGLDGHWAKDCPAK---PSVIVG----GNSL 658
           SY+  + SNL  ++++ +  +     C+KCG +GHWA+DC A+   P+   G     +S 
Sbjct: 209 SYSVTKNSNLGDSDTRGYQTAKTGAPCYKCGKEGHWARDCTAQSGNPTYEAGQVKSSSSS 268

Query: 659 GSCYKCGGSGHWAKDCTGQ 715
           G CYKCG  GHWAKDCTGQ
Sbjct: 269 GECYKCGKQGHWAKDCTGQ 287


>ref|XP_006347729.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 328

 Score =  152 bits (384), Expect = 2e-34
 Identities = 86/241 (35%), Positives = 110/241 (45%), Gaps = 6/241 (2%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFYKCP+RQENGGCGFFEWCD              +  +S  +  +L CPCG+G+CLVL
Sbjct: 156 RKFYKCPIRQENGGCGFFEWCDQPPVTDSLTTRGPSYSVSS--TFQELSCPCGSGTCLVL 213

Query: 185 TAKTGNNVGQQFYRCPNQVSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXXXX 364
           TAKTG N+GQQFYRCP     CGFFKWCN             DN                
Sbjct: 214 TAKTGKNIGQQFYRCPTNQGGCGFFKWCN-------------DN---------------- 244

Query: 365 XXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYNQTSNLDTA 544
                             +N S+S +S  S      +   N  +++ +  +         
Sbjct: 245 -----------------TTNASFSNSSNSSQTYPKMDGSTNKINNSVTSCF--------- 278

Query: 545 NSKNFSGSSDICFKCGLDGHWAKDCP---AKPSVIVGG---NSLGSCYKCGGSGHWAKDC 706
                        KCG  GHWAKDCP   ++ S   GG   ++  +C+ CG  GHWAKDC
Sbjct: 279 -------------KCGNAGHWAKDCPQSSSQRSAADGGIQYSNSSTCFNCGKPGHWAKDC 325

Query: 707 T 709
           +
Sbjct: 326 S 326


>gb|EXC35009.1| DNA topoisomerase 3-alpha [Morus notabilis]
          Length = 342

 Score =  149 bits (377), Expect = 1e-33
 Identities = 85/206 (41%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFYKCP+RQENGGCGFFEWCDN                 S++S    PCPCGAG CL+L
Sbjct: 172 RKFYKCPLRQENGGCGFFEWCDNASGNNSMAGG----NYTSDSSFPGRPCPCGAGLCLIL 227

Query: 185 TAKTGNNVGQQFYRCP-NQVSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXXX 361
           TAKTG N+GQQFYRCP NQ S CGFFKWCN+   +IG   S   N N             
Sbjct: 228 TAKTGQNIGQQFYRCPANQGSSCGFFKWCNENTTSIGVPVS---NPNAFYN--------- 275

Query: 362 XXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYNQTSNLDT 541
                          +   +N SY+  +G     S F  G+    +      +  S+   
Sbjct: 276 ---------------SIDTNNTSYNVRTGS----SCFKCGKEGHWARDC---SVPSSNPA 313

Query: 542 ANSKNFSGSSDICFKCGLDGHWAKDC 619
           A     S SS  C+KCG  GHW++DC
Sbjct: 314 AELGGRSASSGTCYKCGKPGHWSRDC 339



 Score =  108 bits (271), Expect = 2e-21
 Identities = 68/222 (30%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
 Frame = +2

Query: 113 HESASNTSVADLPCPCGAGSCLVLTAKTGNNVGQQFYRCP--NQVSQCGFFKWCNQQNIA 286
           H + S+ S+ +  CPCG G C VLTA T  N G++FY+CP   +   CGFF+WC      
Sbjct: 139 HGAGSDPSIPEKSCPCGLGICTVLTANTEKNRGRKFYKCPLRQENGGCGFFEWC------ 192

Query: 287 IGQRTSYLDNANXXXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRS 466
                   DNA+                           C         +A +GQ+  + 
Sbjct: 193 --------DNASGNNSMAGGNYTSDSSFPGRPCPCGAGLC------LILTAKTGQNIGQQ 238

Query: 467 SFNVGRNSASSATSYTY---NQTS-------------NLDTANSKNFSGSSDICFKCGLD 598
            +    N  SS   + +   N TS             ++DT N+     +   CFKCG +
Sbjct: 239 FYRCPANQGSSCGFFKWCNENTTSIGVPVSNPNAFYNSIDTNNTSYNVRTGSSCFKCGKE 298

Query: 599 GHWAKDC---PAKPSVIVGGNSL--GSCYKCGGSGHWAKDCT 709
           GHWA+DC    + P+  +GG S   G+CYKCG  GHW++DC+
Sbjct: 299 GHWARDCSVPSSNPAAELGGRSASSGTCYKCGKPGHWSRDCS 340


>ref|XP_004147743.1| PREDICTED: uncharacterized protein LOC101213376 [Cucumis sativus]
           gi|449516453|ref|XP_004165261.1| PREDICTED:
           uncharacterized protein LOC101228208 [Cucumis sativus]
          Length = 327

 Score =  143 bits (361), Expect = 9e-32
 Identities = 79/216 (36%), Positives = 112/216 (51%), Gaps = 11/216 (5%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFYKCPVRQENGGCGFFEWCD+              ++  ++S +DL CPCGAGSC +L
Sbjct: 149 RKFYKCPVRQENGGCGFFEWCDSASVANVVSYGS---QNPLSSSFSDLQCPCGAGSCKIL 205

Query: 185 TAKTGNNVGQQFYRCPNQVSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXXXX 364
           TAKTGNNVG+QFY CP+  + C FF+WC + ++                           
Sbjct: 206 TAKTGNNVGKQFYCCPSSQASCRFFRWCEEPSMETK------------------------ 241

Query: 365 XXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSY--------TYN 520
                         NQ ++ K Y   +  S   ++ NV  +S+SS+  Y         ++
Sbjct: 242 --------------NQESTPKVYGNTNDTSK-SATLNVKTSSSSSSYKYGSEGHWARDWS 286

Query: 521 QTSNLDTANS---KNFSGSSDICFKCGLDGHWAKDC 619
           Q+ +  T+ +   ++ S S+  CFKCG+ GHWA+DC
Sbjct: 287 QSPSSSTSPAEYGRSQSSSAGSCFKCGMPGHWARDC 322



 Score =  100 bits (248), Expect = 1e-18
 Identities = 66/214 (30%), Positives = 88/214 (41%), Gaps = 17/214 (7%)
 Frame = +2

Query: 119 SASNTSVADLPCPCGAGSCLVLTAKTGNNVGQQFYRCP--NQVSQCGFFKWCNQQNIAIG 292
           S ++ SV D  CPCG+G C VLTA T  N G++FY+CP   +   CGFF+WC+  ++A  
Sbjct: 118 SGNDMSVPDKACPCGSGICSVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDSASVA-- 175

Query: 293 QRTSYLDNANXXXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVR--- 463
              SY                                       + Y   S Q+  R   
Sbjct: 176 NVVSY----GSQNPLSSSFSDLQCPCGAGSCKILTAKTGNNVGKQFYCCPSSQASCRFFR 231

Query: 464 ----SSFNVGRNSASSATSYTYNQTSNLDTANSKNFSGSSDICFKCGLDGHWAKDCPAKP 631
                S       ++       N TS   T N K  S SS   +K G +GHWA+D    P
Sbjct: 232 WCEEPSMETKNQESTPKVYGNTNDTSKSATLNVKTSSSSSS--YKYGSEGHWARDWSQSP 289

Query: 632 SVIVG--------GNSLGSCYKCGGSGHWAKDCT 709
           S             +S GSC+KCG  GHWA+DC+
Sbjct: 290 SSSTSPAEYGRSQSSSAGSCFKCGMPGHWARDCS 323


>ref|XP_004230079.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
          Length = 301

 Score =  142 bits (359), Expect = 2e-31
 Identities = 87/241 (36%), Positives = 111/241 (46%), Gaps = 6/241 (2%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFY+CP+RQENGGCGFF+WCD              +  +S  +  +L CPCG+G+CLVL
Sbjct: 129 RKFYRCPMRQENGGCGFFQWCDQPPVTDSLTTRGPSYSVSS--TFPELSCPCGSGTCLVL 186

Query: 185 TAKTGNNVGQQFYRCPNQVSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXXXX 364
           TAKTG N+GQQFYRCP     CGFFKWCN             DN                
Sbjct: 187 TAKTGKNIGQQFYRCPLYQGGCGFFKWCN-------------DNTT-------------- 219

Query: 365 XXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYNQTSNLDTA 544
                         N + SN S S+ +    +  S N   NS +S+              
Sbjct: 220 --------------NASFSNSSNSSQT-YPKIDGSTNKINNSVASS-------------- 250

Query: 545 NSKNFSGSSDICFKCGLDGHWAKDCP---AKPSVIVGG---NSLGSCYKCGGSGHWAKDC 706
                       FKCG  G+W KDCP   ++ S   GG   ++  +C+KCG  G WAKDC
Sbjct: 251 ------------FKCGNAGNWVKDCPQSSSQRSAADGGVQYSNSRTCFKCGKPGCWAKDC 298

Query: 707 T 709
           +
Sbjct: 299 S 299


>ref|XP_002520597.1| hypothetical protein RCOM_0673560 [Ricinus communis]
           gi|223540257|gb|EEF41830.1| hypothetical protein
           RCOM_0673560 [Ricinus communis]
          Length = 311

 Score =  142 bits (358), Expect = 2e-31
 Identities = 78/206 (37%), Positives = 97/206 (47%), Gaps = 1/206 (0%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFY+CP RQENGGCGFFEWCD              +  A+    +D+PCPCGAG CL+L
Sbjct: 128 RKFYRCPFRQENGGCGFFEWCDGAS-----------NSKANRIYASDVPCPCGAGFCLIL 176

Query: 185 TAKTGNNVGQQFYRCP-NQVSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXXX 361
           TAKTG N+GQQFYRCP NQ S C FFKWCN   IA G + + + N +             
Sbjct: 177 TAKTGKNIGQQFYRCPANQGSSCSFFKWCNDTVIAAGAQPASVLNVSSTNDLSKKSNSV- 235

Query: 362 XXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYNQTSNLDT 541
                           +TAS+       G        +    S   A S      S    
Sbjct: 236 ----------------RTASSCFKCGNEGHWAEDCPSHSSPQSRVPADSRARTAASCFPA 279

Query: 542 ANSKNFSGSSDICFKCGLDGHWAKDC 619
                 + +S  C+KCG  GHWA++C
Sbjct: 280 DAEARTAAASSTCYKCGTPGHWARNC 305



 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 62/213 (29%), Positives = 86/213 (40%), Gaps = 27/213 (12%)
 Frame = +2

Query: 152 CPCGAGSCLVLTAKTGNNVGQQFYRCP--NQVSQCGFFKWCNQQNIAIGQRTSYLDNANX 325
           CPCG G+C+VLTA T  N G++FYRCP   +   CGFF+WC              D A+ 
Sbjct: 108 CPCGLGNCVVLTANTERNQGRKFYRCPFRQENGGCGFFEWC--------------DGASN 153

Query: 326 XXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSF---NVGRNSAS 496
                                       +    + Y   + Q    S F   N    +A 
Sbjct: 154 SKANRIYASDVPCPCGAGFCLILTAKTGKNIGQQFYRCPANQGSSCSFFKWCNDTVIAAG 213

Query: 497 SATSYTYNQTSNLDTANSKNFSGSSDICFKCGLDGHWAKDCP--AKPSVIVGGNS----- 655
           +  +   N +S  D +   N   ++  CFKCG +GHWA+DCP  + P   V  +S     
Sbjct: 214 AQPASVLNVSSTNDLSKKSNSVRTASSCFKCGNEGHWAEDCPSHSSPQSRVPADSRARTA 273

Query: 656 ---------------LGSCYKCGGSGHWAKDCT 709
                            +CYKCG  GHWA++CT
Sbjct: 274 ASCFPADAEARTAAASSTCYKCGTPGHWARNCT 306


>ref|XP_007214869.1| hypothetical protein PRUPE_ppa020564mg [Prunus persica]
           gi|462411019|gb|EMJ16068.1| hypothetical protein
           PRUPE_ppa020564mg [Prunus persica]
          Length = 352

 Score =  137 bits (346), Expect = 5e-30
 Identities = 80/215 (37%), Positives = 99/215 (46%), Gaps = 8/215 (3%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXX-------RVHE-SASNTSVADLPCPC 160
           RKFYKCP+RQENGGCGFFEWCDN                  R H  +AS++S   L CPC
Sbjct: 167 RKFYKCPLRQENGGCGFFEWCDNASGPNVMASTGMGSGSATRTHSYAASDSSFPALECPC 226

Query: 161 GAGSCLVLTAKTGNNVGQQFYRCPNQVSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXX 340
           G G CL+LTAKTG N+G QFYRCP     CGFFKWCN+     G     L  +       
Sbjct: 227 GGGLCLILTAKTGKNIGSQFYRCPAN-EGCGFFKWCNEHT---GAAAGVLGGSAAKVERK 282

Query: 341 XXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYN 520
                                    ASN  +   +G S  +     G  +       +YN
Sbjct: 283 VL---------------------SEASNNGFGVRTGSSCFKCG-KEGHWARDCPAVPSYN 320

Query: 521 QTSNLDTANSKNFSGSSDICFKCGLDGHWAKDCPA 625
               L+  +    + S   C+KCG  GHWA+DCP+
Sbjct: 321 APVELEARS----AASPGSCYKCGKPGHWARDCPS 351



 Score =  106 bits (264), Expect = 2e-20
 Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 20/217 (9%)
 Frame = +2

Query: 116 ESASNTSVADLPCPCGAGSCLVLTAKTGNNVGQQFYRCP--NQVSQCGFFKWCNQQNIAI 289
           +S+++ SV +  CPCG G+C+VLTA T  N G++FY+CP   +   CGFF+WC+  +   
Sbjct: 135 DSSASISVPEKSCPCGFGACMVLTANTEKNRGRKFYKCPLRQENGGCGFFEWCDNASGPN 194

Query: 290 GQRTSYLDNANXXXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSS 469
              ++ + + +                                + K+  +   + P    
Sbjct: 195 VMASTGMGSGSATRTHSYAASDSSFPALECPCGGGLCLILTAKTGKNIGSQFYRCPANEG 254

Query: 470 F--------NVGRNSASSATSYTYNQTSNLDTANSKNF---SGSSDICFKCGLDGHWAKD 616
                    + G  +     S    +   L  A++  F   +GSS  CFKCG +GHWA+D
Sbjct: 255 CGFFKWCNEHTGAAAGVLGGSAAKVERKVLSEASNNGFGVRTGSS--CFKCGKEGHWARD 312

Query: 617 CPAKPSVIV-------GGNSLGSCYKCGGSGHWAKDC 706
           CPA PS             S GSCYKCG  GHWA+DC
Sbjct: 313 CPAVPSYNAPVELEARSAASPGSCYKCGKPGHWARDC 349


>gb|EEC76291.1| hypothetical protein OsI_13802 [Oryza sativa Indica Group]
          Length = 384

 Score =  134 bits (336), Expect = 7e-29
 Identities = 86/238 (36%), Positives = 116/238 (48%), Gaps = 8/238 (3%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFY+CP+R +NGGC +FEWCDN            V +S  +TSVA + CPCGAG+CL+L
Sbjct: 183 RKFYRCPMR-DNGGCNYFEWCDNPSPGPANVSSNTVFQS--DTSVAHMLCPCGAGACLIL 239

Query: 185 TAKTGNNVGQQFYRCP-NQ-VSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXX 358
           T KTG NVG+QFYRCP NQ  S CG+FKWC++Q +    RT+                  
Sbjct: 240 TTKTGKNVGRQFYRCPANQGGSSCGYFKWCDEQQL----RTA------------------ 277

Query: 359 XXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSS----FNVGRNSASSATSYTYNQT 526
                             +    +  A+SGQ P + S    F  G+ +  +      +  
Sbjct: 278 -------------APLQASTQYHTDVASSGQIPSKRSSSACFKCGQENHWAKDCPNQSSD 324

Query: 527 SNLDTANSKNFSGSS-DICFKCGLDGHWAKDCPAKPSVIVGGNSLGSCYKCGGS-GHW 694
              D       S SS D CFKCG  GHW++DC   P+   G +++ S  K   + G W
Sbjct: 325 PYPDKGGRTFTSASSPDACFKCGKSGHWSRDC---PTANCGSSTVSSHVKSSSTLGSW 379



 Score =  100 bits (249), Expect = 9e-19
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
 Frame = +2

Query: 134 SVADLPCPCGAGSCLVLTAKTGNNVGQQFYRCPNQVSQ-CGFFKWC--------NQQNIA 286
           +V +  CPCGAGSCLVLT+ T  N G++FYRCP + +  C +F+WC        N  +  
Sbjct: 157 AVEEKACPCGAGSCLVLTSNTPRNPGRKFYRCPMRDNGGCNYFEWCDNPSPGPANVSSNT 216

Query: 287 IGQRTSYLDNANXXXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRS 466
           + Q  + + +                              NQ  S+  Y     +  +R+
Sbjct: 217 VFQSDTSVAHMLCPCGAGACLILTTKTGKNVGRQFYRCPANQGGSSCGYFKWCDEQQLRT 276

Query: 467 SFNVGRNSASSATSYTYNQTSNLDTANSKNFSGSSDICFKCGLDGHWAKDCPAKPS---- 634
           +  +      ++T Y  +  S+    + +    SS  CFKCG + HWAKDCP + S    
Sbjct: 277 AAPL-----QASTQYHTDVASSGQIPSKR----SSSACFKCGQENHWAKDCPNQSSDPYP 327

Query: 635 -----VIVGGNSLGSCYKCGGSGHWAKDC 706
                     +S  +C+KCG SGHW++DC
Sbjct: 328 DKGGRTFTSASSPDACFKCGKSGHWSRDC 356


>ref|NP_001051489.1| Os03g0786500 [Oryza sativa Japonica Group]
           gi|50355715|gb|AAT75240.1| putative DNA-binding protein
           [Oryza sativa Japonica Group]
           gi|108711439|gb|ABF99234.1| GRF zinc finger family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113549960|dbj|BAF13403.1| Os03g0786500 [Oryza sativa
           Japonica Group] gi|215741242|dbj|BAG97737.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222625927|gb|EEE60059.1| hypothetical protein
           OsJ_12863 [Oryza sativa Japonica Group]
          Length = 384

 Score =  134 bits (336), Expect = 7e-29
 Identities = 86/238 (36%), Positives = 116/238 (48%), Gaps = 8/238 (3%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFY+CP+R +NGGC +FEWCDN            V +S  +TSVA + CPCGAG+CL+L
Sbjct: 183 RKFYRCPMR-DNGGCNYFEWCDNPSPGPANVSGNTVFQS--DTSVAHMLCPCGAGACLIL 239

Query: 185 TAKTGNNVGQQFYRCP-NQ-VSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXX 358
           T KTG NVG+QFYRCP NQ  S CG+FKWC++Q +    RT+                  
Sbjct: 240 TTKTGKNVGRQFYRCPANQGGSSCGYFKWCDEQQL----RTA------------------ 277

Query: 359 XXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSS----FNVGRNSASSATSYTYNQT 526
                             +    +  A+SGQ P + S    F  G+ +  +      +  
Sbjct: 278 -------------APLQASTQYHTDVASSGQIPSKRSSSACFKCGQENHWAKDCPNQSSD 324

Query: 527 SNLDTANSKNFSGSS-DICFKCGLDGHWAKDCPAKPSVIVGGNSLGSCYKCGGS-GHW 694
              D       S SS D CFKCG  GHW++DC   P+   G +++ S  K   + G W
Sbjct: 325 PYPDKGGRTFTSASSPDACFKCGKSGHWSRDC---PTANCGSSTVSSHVKSSSTLGSW 379



 Score =  100 bits (248), Expect = 1e-18
 Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 18/209 (8%)
 Frame = +2

Query: 134 SVADLPCPCGAGSCLVLTAKTGNNVGQQFYRCPNQVSQ-CGFFKWC--------NQQNIA 286
           +V +  CPCGAGSCLVLT+ T  N G++FYRCP + +  C +F+WC        N     
Sbjct: 157 AVEEKACPCGAGSCLVLTSNTPRNPGRKFYRCPMRDNGGCNYFEWCDNPSPGPANVSGNT 216

Query: 287 IGQRTSYLDNANXXXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRS 466
           + Q  + + +                              NQ  S+  Y     +  +R+
Sbjct: 217 VFQSDTSVAHMLCPCGAGACLILTTKTGKNVGRQFYRCPANQGGSSCGYFKWCDEQQLRT 276

Query: 467 SFNVGRNSASSATSYTYNQTSNLDTANSKNFSGSSDICFKCGLDGHWAKDCPAKPS---- 634
           +  +      ++T Y  +  S+    + +    SS  CFKCG + HWAKDCP + S    
Sbjct: 277 AAPL-----QASTQYHTDVASSGQIPSKR----SSSACFKCGQENHWAKDCPNQSSDPYP 327

Query: 635 -----VIVGGNSLGSCYKCGGSGHWAKDC 706
                     +S  +C+KCG SGHW++DC
Sbjct: 328 DKGGRTFTSASSPDACFKCGKSGHWSRDC 356


>ref|XP_004981536.1| PREDICTED: DNA-binding protein HEXBP-like [Setaria italica]
          Length = 370

 Score =  131 bits (330), Expect = 4e-28
 Identities = 80/223 (35%), Positives = 102/223 (45%), Gaps = 3/223 (1%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFYKCP+R +NGGC FFEWCD             V +S   TS  D+ CPCGAG+CL+L
Sbjct: 165 RKFYKCPLR-DNGGCNFFEWCDAPSPGPANARSNTVFQS--ETSATDMLCPCGAGACLIL 221

Query: 185 TAKTGNNVGQQFYRCPNQV--SQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXX 358
           T KTG NVG+QFYRCP       CGFFKWC++Q   +G                      
Sbjct: 222 TTKTGKNVGRQFYRCPGNQGGGSCGFFKWCDEQQPRVGAPLQASPQ-------------- 267

Query: 359 XXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYNQTSNLD 538
                            QT +  S   ++ +S   S F  G+ +  +      +     D
Sbjct: 268 ----------------YQTDATSSIQNSNKRSS-SSCFKCGQENHWARDCPNQSSDPYPD 310

Query: 539 TANSKNFSGSS-DICFKCGLDGHWAKDCPAKPSVIVGGNSLGS 664
                  S SS D CFKCG  GHW+++CP   S   GG   G+
Sbjct: 311 KGGRTITSASSPDGCFKCGKAGHWSRECPTSNSGGGGGGGTGA 353



 Score =  102 bits (255), Expect = 2e-19
 Identities = 66/223 (29%), Positives = 92/223 (41%), Gaps = 19/223 (8%)
 Frame = +2

Query: 137 VADLPCPCGAGSCLVLTAKTGNNVGQQFYRCP-NQVSQCGFFKWCN---------QQNIA 286
           V +  CPCGAGSCLVLT+ T  N G++FY+CP      C FF+WC+         + N  
Sbjct: 140 VEEKACPCGAGSCLVLTSNTPRNPGRKFYKCPLRDNGGCNFFEWCDAPSPGPANARSNTV 199

Query: 287 IGQRTSYLDNANXXXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRS 466
               TS  D                                   S   +     Q P   
Sbjct: 200 FQSETSATDMLCPCGAGACLILTTKTGKNVGRQFYRCPGNQGGGSCGFFKWCDEQQP--- 256

Query: 467 SFNVGRNSASSATSYTYNQTSNLDTANSKNFSGSSDICFKCGLDGHWAKDCPAKPS---- 634
              VG    +S   Y  + TS++  +N +    SS  CFKCG + HWA+DCP + S    
Sbjct: 257 --RVGAPLQASP-QYQTDATSSIQNSNKR----SSSSCFKCGQENHWARDCPNQSSDPYP 309

Query: 635 -----VIVGGNSLGSCYKCGGSGHWAKDCTGQDVKNGNGSRSG 748
                 I   +S   C+KCG +GHW+++C   +   G G  +G
Sbjct: 310 DKGGRTITSASSPDGCFKCGKAGHWSRECPTSNSGGGGGGGTG 352


>ref|XP_003558095.1| PREDICTED: uncharacterized protein LOC100838417 [Brachypodium
           distachyon]
          Length = 366

 Score =  129 bits (325), Expect = 1e-27
 Identities = 75/208 (36%), Positives = 102/208 (49%), Gaps = 1/208 (0%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFY+CP+R +NGGC  FEWCD               +S  + S+ ++PCPCGAG+CL+L
Sbjct: 167 RKFYRCPMR-DNGGCNMFEWCDAPSPGLANARSNTGFQS--DASLVNMPCPCGAGTCLIL 223

Query: 185 TAKTGNNVGQQFYRCPNQ-VSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXXX 361
           T K G NVG+QFYRCP Q  S CGFFKWC+ Q +    RT+    A+             
Sbjct: 224 TTKAGVNVGRQFYRCPAQGGSSCGFFKWCDDQQL----RTTAPLQAS------------- 266

Query: 362 XXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYNQTSNLDT 541
                            T +N++ S +S         N       + +S  Y+       
Sbjct: 267 ----------APYQTGVTPTNQNISKSSSSCFKCGQENHWAKDCPNQSSDPYSDKG---- 312

Query: 542 ANSKNFSGSSDICFKCGLDGHWAKDCPA 625
             +   + SSD CFKCG+ GHW++DCPA
Sbjct: 313 GRTLTSASSSDACFKCGMAGHWSRDCPA 340



 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 63/210 (30%), Positives = 89/210 (42%), Gaps = 20/210 (9%)
 Frame = +2

Query: 137 VADLPCPCGAGSCLVLTAKTGNNVGQQFYRCPNQVSQ-CGFFKWCNQQNIAIGQRTSYLD 313
           V +  CPCGAG CLVLT+ T  N G++FYRCP + +  C  F+WC+  +  +    S   
Sbjct: 142 VEEKACPCGAGICLVLTSNTPRNPGRKFYRCPMRDNGGCNMFEWCDAPSPGLANARS--- 198

Query: 314 NANXXXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVG---- 481
             N                                  + Y     + P +   + G    
Sbjct: 199 --NTGFQSDASLVNMPCPCGAGTCLILTTKAGVNVGRQFY-----RCPAQGGSSCGFFKW 251

Query: 482 ------RNSASSATSYTYNQTSNLDTANSKNFSGSSDICFKCGLDGHWAKDCPAKPS--- 634
                 R +A    S  Y QT    T  ++N S SS  CFKCG + HWAKDCP + S   
Sbjct: 252 CDDQQLRTTAPLQASAPY-QTGV--TPTNQNISKSSSSCFKCGQENHWAKDCPNQSSDPY 308

Query: 635 ------VIVGGNSLGSCYKCGGSGHWAKDC 706
                  +   +S  +C+KCG +GHW++DC
Sbjct: 309 SDKGGRTLTSASSSDACFKCGMAGHWSRDC 338


>ref|XP_006651886.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryza brachyantha]
          Length = 300

 Score =  125 bits (313), Expect = 3e-26
 Identities = 77/213 (36%), Positives = 102/213 (47%), Gaps = 7/213 (3%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFY+CP+R +NGGC FFEWCD                S S+ S+ ++ CPCGAG+CL L
Sbjct: 100 RKFYRCPMR-DNGGCNFFEWCDTPSSGAAPANGCSSAISQSDKSMPNMLCPCGAGACLFL 158

Query: 185 TAKTGNNVGQQFYRCP-NQ-VSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXX 358
           T KTG NVG+QF+RCP NQ  S CGFF+WC++Q      RT+                  
Sbjct: 159 TTKTGKNVGRQFFRCPANQGGSSCGFFQWCDEQ-----LRTA------------------ 195

Query: 359 XXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSS----FNVGRNSASSATSYTYNQT 526
                             +  + +  A+SGQ P + S    F  G+ +  +      +  
Sbjct: 196 ---------------AQSSTQHHTDVASSGQIPSKRSSSACFKCGQENHWAKECPNQSSD 240

Query: 527 SNLDTANSKNFSGSS-DICFKCGLDGHWAKDCP 622
              D       S SS D CFKCG  GHW++DCP
Sbjct: 241 PYPDKGGRTFTSASSPDACFKCGKAGHWSRDCP 273



 Score =  102 bits (255), Expect = 2e-19
 Identities = 65/222 (29%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
 Frame = +2

Query: 125 SNTSVADLPCPCGAGSCLVLTAKTGNNVGQQFYRCP-NQVSQCGFFKWC----------N 271
           +N +V +  CPCGAGSCLVLT+ T  N G++FYRCP      C FF+WC          N
Sbjct: 71  ANGAVEEKACPCGAGSCLVLTSNTPRNPGRKFYRCPMRDNGGCNFFEWCDTPSSGAAPAN 130

Query: 272 QQNIAIGQRTSYLDNANXXXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQ 451
             + AI Q    + N                              NQ  S+  +     +
Sbjct: 131 GCSSAISQSDKSMPNMLCPCGAGACLFLTTKTGKNVGRQFFRCPANQGGSSCGFFQWCDE 190

Query: 452 SPVRSSFNVGRNSASSATSYTYNQTSNLDTANSKNFSGSSDICFKCGLDGHWAKDCPAKP 631
                     R +A S+T +  +  S+    + +    SS  CFKCG + HWAK+CP + 
Sbjct: 191 QL--------RTAAQSSTQHHTDVASSGQIPSKR----SSSACFKCGQENHWAKECPNQS 238

Query: 632 S---------VIVGGNSLGSCYKCGGSGHWAKDCTGQDVKNG 730
           S              +S  +C+KCG +GHW++DC   +  +G
Sbjct: 239 SDPYPDKGGRTFTSASSPDACFKCGKAGHWSRDCPTANCGSG 280


>dbj|BAJ93454.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 371

 Score =  124 bits (312), Expect = 4e-26
 Identities = 82/237 (34%), Positives = 114/237 (48%), Gaps = 7/237 (2%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFY+CP R +NGGC FFEWCD                S S+ S+ ++PC CGAG+CL+L
Sbjct: 165 RKFYRCPTR-DNGGCNFFEWCDAPSLGPANARSNTC--SQSDASIVNMPCSCGAGTCLIL 221

Query: 185 TAKTGNNVGQQFYRCPNQ-VSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXXX 361
           T K G NVG+QFYRCP Q  S CGFFKWC+ Q     +  + L  A+             
Sbjct: 222 TTKAGVNVGRQFYRCPAQGGSSCGFFKWCDDQQ---PRTAAPLQGAS------------- 265

Query: 362 XXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNS--ASSATSYTYNQTSNL 535
                            + +N++ S +S        F  G+ +  A    + + +  S+ 
Sbjct: 266 ----------SPYQAGASPTNQNMSKSSS-----GCFKCGQENHWAKDCPNQSSDPCSD- 309

Query: 536 DTANSKNFSGSSDICFKCGLDGHWAKDCPAKPSVIVGGN---SLGSCYKCGGS-GHW 694
               + + + SSD CFKCG  GHW++DCP   S   GG    ++GS  K   + G W
Sbjct: 310 KGGRTLSSATSSDGCFKCGKAGHWSRDCPVTNSGGGGGGGGAAVGSNVKSSSTLGSW 366



 Score =  102 bits (255), Expect = 2e-19
 Identities = 67/218 (30%), Positives = 93/218 (42%), Gaps = 18/218 (8%)
 Frame = +2

Query: 137 VADLPCPCGAGSCLVLTAKTGNNVGQQFYRCPNQVSQ-CGFFKWC--------NQQNIAI 289
           V +  CPCG+G CLVLT+ T  N G++FYRCP + +  C FF+WC        N ++   
Sbjct: 140 VEEKACPCGSGICLVLTSSTPRNPGRKFYRCPTRDNGGCNFFEWCDAPSLGPANARSNTC 199

Query: 290 GQRTSYLDNANXXXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSS 469
            Q  + + N                                 +S   +     Q P  ++
Sbjct: 200 SQSDASIVNMPCSCGAGTCLILTTKAGVNVGRQFYRCPAQGGSSCGFFKWCDDQQPRTAA 259

Query: 470 FNVGRNSASSATSYTYNQTSNLDTANSKNFSGSSDICFKCGLDGHWAKDCP---AKPSVI 640
              G +S   A +   NQ          N S SS  CFKCG + HWAKDCP   + P   
Sbjct: 260 PLQGASSPYQAGASPTNQ----------NMSKSSSGCFKCGQENHWAKDCPNQSSDPCSD 309

Query: 641 VGGNSLGS------CYKCGGSGHWAKDCTGQDVKNGNG 736
            GG +L S      C+KCG +GHW++DC   +   G G
Sbjct: 310 KGGRTLSSATSSDGCFKCGKAGHWSRDCPVTNSGGGGG 347


>ref|XP_002463774.1| hypothetical protein SORBIDRAFT_01g005940 [Sorghum bicolor]
           gi|241917628|gb|EER90772.1| hypothetical protein
           SORBIDRAFT_01g005940 [Sorghum bicolor]
          Length = 366

 Score =  120 bits (300), Expect = 1e-24
 Identities = 78/223 (34%), Positives = 97/223 (43%), Gaps = 3/223 (1%)
 Frame = +2

Query: 5   RKFYKCPVRQENGGCGFFEWCDNXXXXXXXXXXXRVHESASNTSVADLPCPCGAGSCLVL 184
           RKFYKCP R  +GGC FFEWCD             V  S   TS  D+ CPCGAG+CL+L
Sbjct: 160 RKFYKCPTR--DGGCNFFEWCDAPSPAPANARNNMVLHS--ETSATDMLCPCGAGTCLIL 215

Query: 185 TAKTGNNVGQQFYRCP-NQ-VSQCGFFKWCNQQNIAIGQRTSYLDNANXXXXXXXXXXXX 358
           T KTG NVG+QF+RCP NQ    CGFFKWC++Q   +G       +              
Sbjct: 216 TTKTGKNVGRQFFRCPLNQGGGSCGFFKWCDEQQPRVGAPLQQQASP------------- 262

Query: 359 XXXXXXXXXXXXXXXCNQTASNKSYSAASGQSPVRSSFNVGRNSASSATSYTYNQTSNLD 538
                              A + S      Q    S F  G+ +  +      +     D
Sbjct: 263 ----------------QYQADSMSSIQNPSQRSSSSCFKCGQENHWARDCPNQSSDPYPD 306

Query: 539 TANSKNFSGSS-DICFKCGLDGHWAKDCPAKPSVIVGGNSLGS 664
                  S SS   C+ CG  GHW++DCP   S   GG S G+
Sbjct: 307 KGGRPITSSSSPGACYNCGRPGHWSRDCPTSNS--GGGGSGGT 347



 Score =  105 bits (262), Expect = 3e-20
 Identities = 67/227 (29%), Positives = 94/227 (41%), Gaps = 19/227 (8%)
 Frame = +2

Query: 125 SNTSVADLPCPCGAGSCLVLTAKTGNNVGQQFYRCPNQVSQCGFFKWCN---------QQ 277
           ++  V D  CPCGAG+CLVLT+ T  N G++FY+CP +   C FF+WC+         + 
Sbjct: 131 ADMKVEDKACPCGAGTCLVLTSNTLKNPGRKFYKCPTRDGGCNFFEWCDAPSPAPANARN 190

Query: 278 NIAIGQRTSYLDNANXXXXXXXXXXXXXXXXXXXXXXXXXXXCNQTASNKSYSAASGQSP 457
           N+ +   TS  D                                   S   +     Q P
Sbjct: 191 NMVLHSETSATDMLCPCGAGTCLILTTKTGKNVGRQFFRCPLNQGGGSCGFFKWCDEQQP 250

Query: 458 VRSSFNVGRNSASSAT-SYTYNQTSNLDTANSKNFSGSSDICFKCGLDGHWAKDCPAKPS 634
                 VG      A+  Y  +  S++   + +    SS  CFKCG + HWA+DCP + S
Sbjct: 251 -----RVGAPLQQQASPQYQADSMSSIQNPSQR----SSSSCFKCGQENHWARDCPNQSS 301

Query: 635 ---------VIVGGNSLGSCYKCGGSGHWAKDCTGQDVKNGNGSRSG 748
                     I   +S G+CY CG  GHW++DC      N  G  SG
Sbjct: 302 DPYPDKGGRPITSSSSPGACYNCGRPGHWSRDC---PTSNSGGGGSG 345