BLASTX nr result
ID: Papaver27_contig00049482
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00049482
(681 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi... 68 3e-09
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,... 63 8e-08
ref|XP_007041612.1| Pentatricopeptide repeat (PPR) superfamily p... 60 7e-07
ref|XP_007041611.1| Pentatricopeptide repeat (PPR) superfamily p... 60 7e-07
ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containi... 59 1e-06
ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citr... 59 1e-06
ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, part... 59 1e-06
ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containi... 59 1e-06
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l... 58 2e-06
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar... 57 6e-06
>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
protein product [Vitis vinifera]
Length = 878
Score = 67.8 bits (164), Expect = 3e-09
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2
Query: 2 SGLAVRVLKRVQKGWGQGSISNVQPQKKEFLDYWEDT 112
SGLA++ LKRVQKGWGQGSIS++QPQK +FLDYWE T
Sbjct: 841 SGLALKALKRVQKGWGQGSISSLQPQKNDFLDYWEGT 877
>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 874
Score = 63.2 bits (152), Expect = 8e-08
Identities = 26/35 (74%), Positives = 32/35 (91%)
Frame = +2
Query: 2 SGLAVRVLKRVQKGWGQGSISNVQPQKKEFLDYWE 106
SG+A++ LKRVQKGWGQGSIS++QPQK EF DYW+
Sbjct: 837 SGIALKALKRVQKGWGQGSISSLQPQKLEFFDYWD 871
>ref|XP_007041612.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
[Theobroma cacao] gi|508705547|gb|EOX97443.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 2 [Theobroma cacao]
Length = 632
Score = 60.1 bits (144), Expect = 7e-07
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2
Query: 2 SGLAVRVLKRVQKGWGQGSISNVQPQKKEFLDYWE 106
SG+A++ LKRVQKGWGQGSIS +QP K +F DYWE
Sbjct: 595 SGIALKALKRVQKGWGQGSISRLQPHKNKFHDYWE 629
>ref|XP_007041611.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
[Theobroma cacao] gi|508705546|gb|EOX97442.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 1 [Theobroma cacao]
Length = 872
Score = 60.1 bits (144), Expect = 7e-07
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2
Query: 2 SGLAVRVLKRVQKGWGQGSISNVQPQKKEFLDYWE 106
SG+A++ LKRVQKGWGQGSIS +QP K +F DYWE
Sbjct: 835 SGIALKALKRVQKGWGQGSISRLQPHKNKFHDYWE 869
>ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Citrus sinensis]
gi|568866524|ref|XP_006486605.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17140-like [Citrus sinensis]
Length = 889
Score = 59.3 bits (142), Expect = 1e-06
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = +2
Query: 2 SGLAVRVLKRVQKGWGQGSISNVQPQKKEFLDYWE 106
SG+A++ LKRVQKGWGQGSIS++Q QK + LDYWE
Sbjct: 840 SGIALKTLKRVQKGWGQGSISSLQAQKYDLLDYWE 874
>ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citrus clementina]
gi|557524367|gb|ESR35673.1| hypothetical protein
CICLE_v10027787mg [Citrus clementina]
Length = 889
Score = 59.3 bits (142), Expect = 1e-06
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = +2
Query: 2 SGLAVRVLKRVQKGWGQGSISNVQPQKKEFLDYWE 106
SG+A++ LKRVQKGWGQGSIS++Q QK + LDYWE
Sbjct: 840 SGIALKTLKRVQKGWGQGSISSLQAQKYDLLDYWE 874
>ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, partial [Capsella rubella]
gi|482565669|gb|EOA29858.1| hypothetical protein
CARUB_v10012952mg, partial [Capsella rubella]
Length = 881
Score = 59.3 bits (142), Expect = 1e-06
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +2
Query: 2 SGLAVRVLKRVQKGWGQGSISNVQPQKKEFLDYWED 109
SG+A++ L RV+KGWGQG IS+ QPQ+ ++LDYWED
Sbjct: 844 SGIALKTLSRVKKGWGQGDISSFQPQRDDYLDYWED 879
>ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like isoform X1 [Glycine max]
Length = 875
Score = 59.3 bits (142), Expect = 1e-06
Identities = 24/35 (68%), Positives = 33/35 (94%)
Frame = +2
Query: 2 SGLAVRVLKRVQKGWGQGSISNVQPQKKEFLDYWE 106
SG+A++ LKRVQKGWGQGSIS++QPQ+ +FLDY++
Sbjct: 838 SGIALKTLKRVQKGWGQGSISSLQPQQNDFLDYYD 872
>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 874
Score = 58.2 bits (139), Expect = 2e-06
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = +2
Query: 2 SGLAVRVLKRVQKGWGQGSISNVQPQKKEFLDYWED 109
SG+A++ L RV+KGWGQG IS+ QPQ+ ++LDYWED
Sbjct: 837 SGIALKSLSRVKKGWGQGDISSFQPQRVDYLDYWED 872
>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 57.0 bits (136), Expect = 6e-06
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +2
Query: 2 SGLAVRVLKRVQKGWGQGSISNVQPQKKEFLDYWED 109
SG+A+R L RV+KGWGQG IS+ QP + ++LDYWED
Sbjct: 837 SGIALRSLSRVKKGWGQGDISSFQPPRVDYLDYWED 872