BLASTX nr result
ID: Papaver27_contig00048991
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00048991
(548 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 78 2e-12
gb|EEC72938.1| hypothetical protein OsI_06800 [Oryza sativa Indi... 77 4e-12
ref|XP_007206694.1| hypothetical protein PRUPE_ppa024911mg [Prun... 76 6e-12
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo... 75 8e-12
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 75 8e-12
gb|EEC84030.1| hypothetical protein OsI_30257 [Oryza sativa Indi... 75 1e-11
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta... 75 1e-11
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 73 5e-11
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo... 72 7e-11
gb|EPS60183.1| hypothetical protein M569_14621, partial [Genlise... 72 1e-10
gb|EPS65988.1| hypothetical protein M569_08791, partial [Genlise... 71 2e-10
gb|EEC79285.1| hypothetical protein OsI_20087 [Oryza sativa Indi... 71 2e-10
gb|ABA98898.1| retrotransposon protein, putative, unclassified [... 70 4e-10
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 70 4e-10
ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [S... 69 6e-10
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 69 6e-10
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers... 69 6e-10
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta... 69 6e-10
gb|ABN07997.1| contains similarity to reverse trancriptase , rel... 69 1e-09
ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thalia... 68 1e-09
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 77.8 bits (190), Expect = 2e-12
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Frame = +2
Query: 47 RVCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDSPKWHPSKTGEFSTKSLYS 226
+V +LID +S +WNL +L F DS W S G +S K+ Y
Sbjct: 959 KVSQLIDPTSRNWNLNMLRDLFPWKDVEIILKQRPLFFKEDSFCWLHSHNGLYSVKTGYE 1018
Query: 227 L--------------IKPSSNSSNIPWNKVWNMRTSPSVRLFVYKCINNMLPLTSH-PSR 361
+KPS NS ++K+WN+ T+P +R+F++K ++ +P+ +R
Sbjct: 1019 FLSKQVHHRLYQEAKVKPSVNSL---FDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTR 1075
Query: 362 FTDVSNDCTFCGHTGETMEHLFFHCPFARSVW 457
+ C C ET+ H+ F CP AR VW
Sbjct: 1076 GIRSDDGCLMCDTENETINHILFECPLARQVW 1107
>gb|EEC72938.1| hypothetical protein OsI_06800 [Oryza sativa Indica Group]
Length = 556
Score = 76.6 bits (187), Expect = 4e-12
Identities = 51/163 (31%), Positives = 67/163 (41%), Gaps = 16/163 (9%)
Frame = +2
Query: 50 VCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDS-PKWHPSKTGEFSTKSLYS 226
V +LID S SW+ + F P D WHP + G FS +S Y
Sbjct: 367 VSDLIDQSE-SWDTDKISQHFLPMDAEAILNIRLSSRLEDDFIAWHPDRLGRFSVRSAYH 425
Query: 227 LI----------KPSSNSSNIPWNKVWNMRTSPSVRLFVYKCINNMLP-LTSHPSRFTDV 373
L S N ++ WN +W V++F ++ I N LP L + R +V
Sbjct: 426 LAIALAQVDEGSSSSGNGNSRAWNALWKCNAPQKVKIFAWRAITNSLPTLENKKKRKLEV 485
Query: 374 SNDCTFCGHTGETMEHLFFHCPFARSVWFASIA----NPFSLI 490
S+ CT CG E + H F CP AR W A NP S I
Sbjct: 486 SDICTICGVESEYVVHALFRCPHARQFWEAMTVDMKLNPLSNI 528
>ref|XP_007206694.1| hypothetical protein PRUPE_ppa024911mg [Prunus persica]
gi|462402336|gb|EMJ07893.1| hypothetical protein
PRUPE_ppa024911mg [Prunus persica]
Length = 378
Score = 75.9 bits (185), Expect = 6e-12
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 17/113 (15%)
Frame = +2
Query: 179 WHPSKTGEFSTKSLYSLI-----------KPSSNSSNI-----PWNKVWNMRTSPSVRLF 310
WH +K G ++ KS Y L K SN PW +W ++ P +++F
Sbjct: 165 WHFTKYGGYTVKSGYDLAIKLRRNGVIGKKGKGECSNQSGQSGPWKHIWALQVPPKIQMF 224
Query: 311 VYKCINNMLPLTSH-PSRFTDVSNDCTFCGHTGETMEHLFFHCPFARSVWFAS 466
+++C N+L + + R DV DC CG+ G+T HLFF C AR WFAS
Sbjct: 225 IWRCYRNVLAVRENLRRRRVDVEADCLLCGNNGKTEVHLFFRCEIARLFWFAS 277
>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
Length = 560
Score = 75.5 bits (184), Expect = 8e-12
Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 16/154 (10%)
Frame = +2
Query: 44 TRVCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDSPKWHPSKTGEFSTKSLY 223
TRV ELID S+ SW++ LL +F P D WH + G FS KS Y
Sbjct: 196 TRVEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMDDMLAWHYDEKGLFSVKSAY 255
Query: 224 SL---------------IKPSSNSSNIPWNKVWNMRTSPSVRLFVYKCINNMLPLTSH-P 355
+ + S + W KVW M+ V+ F+++ +N+L L +
Sbjct: 256 KVQRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQ 315
Query: 356 SRFTDVSNDCTFCGHTGETMEHLFFHCPFARSVW 457
R D+ + C C E HLFF C + VW
Sbjct: 316 QRGMDLDSRCIICNRMNEDAGHLFFKCKKVKKVW 349
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 75.5 bits (184), Expect = 8e-12
Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 16/154 (10%)
Frame = +2
Query: 44 TRVCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDSPKWHPSKTGEFSTKSLY 223
TRV ELID S+ SW++ LL +F P D WH + G FS KS Y
Sbjct: 1089 TRVEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPVHIEMDDMLAWHYDEKGLFSVKSAY 1148
Query: 224 SL---------------IKPSSNSSNIPWNKVWNMRTSPSVRLFVYKCINNMLPLTSH-P 355
+ + S + W KVW M+ V+ F+++ +N+L L +
Sbjct: 1149 KVQRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQ 1208
Query: 356 SRFTDVSNDCTFCGHTGETMEHLFFHCPFARSVW 457
R D+ + C C E HLFF C + VW
Sbjct: 1209 QRGMDLDSRCIICNRMNEDAGHLFFKCKKVKKVW 1242
>gb|EEC84030.1| hypothetical protein OsI_30257 [Oryza sativa Indica Group]
Length = 285
Score = 74.7 bits (182), Expect = 1e-11
Identities = 50/161 (31%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Frame = +2
Query: 50 VCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXX-DSPKWHPSKTGEFSTKSLYS 226
V +LID S SW+ + F P D WHP + G FS +S Y
Sbjct: 96 VSDLIDRSG-SWDTDKISHHFLPMDVEAILNIRLSSRLEEDFIAWHPDRLGRFSVRSAYH 154
Query: 227 LI----------KPSSNSSNIPWNKVWNMRTSPSVRLFVYKCINNMLP-LTSHPSRFTDV 373
L S N S+ WN +W V++F ++ I N L L + R +V
Sbjct: 155 LAVALAQVDDGSSSSGNGSSRAWNALWKCNAPQKVKIFAWRAITNSLTTLENKKKRKLEV 214
Query: 374 SNDCTFCGHTGETMEHLFFHCPFARSVWFASIANPFSLIPL 496
S+ CT CG E + H F CP AR +W A +++ L PL
Sbjct: 215 SDICTICGVESEYVVHALFRCPHARQLWEA-MSDDMQLNPL 254
>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1319
Score = 74.7 bits (182), Expect = 1e-11
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Frame = +2
Query: 47 RVCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDSPKWHPSKTGEFSTKSLY- 223
+V LID + +WNL L FH DS W + G ++ KS Y
Sbjct: 912 KVSHLIDPLTRNWNLKKLTELFHEKDVQLIMHQRPLISSEDSYCWAGTNNGLYTVKSGYE 971
Query: 224 --------SLIKPSS--NSSNIPWNKVWNMRTSPSVRLFVYKCINNMLPLTSH-PSRFTD 370
+L K + S N ++KVW++ T P +++F++K + L + SR
Sbjct: 972 RSSRETFKNLFKEADVYPSVNPLFDKVWSLETVPKIKVFMWKALKGALAVEDRLRSRGIR 1031
Query: 371 VSNDCTFCGHTGETMEHLFFHCPFARSVWFASI 469
++ C FC ET+ HL F CPFAR VW S+
Sbjct: 1032 TADGCLFCKEEIETINHLLFQCPFARQVWALSL 1064
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 72.8 bits (177), Expect = 5e-11
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Frame = +2
Query: 47 RVCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXX-DSPKWHPSKTGEFSTKSLY 223
+VCELI N + WN+ LL+ F P D W SK G+F+ +S Y
Sbjct: 971 KVCELISN--DRWNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAY 1028
Query: 224 --SLI---KPSSNSSNIP----WNKVWNMRTSPSVRLFVYKCINNMLPL-TSHPSRFTDV 373
L+ K ++S P W K+W + P V+LF +K I+N L + T+ R ++
Sbjct: 1029 YHELLEDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNI 1088
Query: 374 SNDCTFCGHTGETMEHLFFHCPFARSVWFASIANPFSLIPLIDSVKRWI---LDWQKNPV 544
C CG ET EHL + C + W+ S + S + W+ LD K+
Sbjct: 1089 DGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKDTE 1148
Query: 545 W 547
W
Sbjct: 1149 W 1149
>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
Length = 1256
Score = 72.4 bits (176), Expect = 7e-11
Identities = 48/160 (30%), Positives = 67/160 (41%), Gaps = 11/160 (6%)
Frame = +2
Query: 50 VCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDSPKWHPSKTGEFSTKSLYSL 229
V +LID S + N + H D WHP + G FS +S Y L
Sbjct: 836 VSDLIDQSGSWDNDKISHHFLPMDAEAILNIHLSSRLEEDFIAWHPDRLGRFSVRSAYHL 895
Query: 230 I----------KPSSNSSNIPWNKVWNMRTSPSVRLFVYKCINNMLP-LTSHPSRFTDVS 376
S N S+ N +W V++F ++ I N L L + R +VS
Sbjct: 896 AVALAQVNDGSSSSGNGSSRACNALWKCNAPQKVKIFAWRAITNSLTTLENKKKRKLEVS 955
Query: 377 NDCTFCGHTGETMEHLFFHCPFARSVWFASIANPFSLIPL 496
+ CT CG E + H FHCP AR +W A +++ L PL
Sbjct: 956 DICTICGVESEYVVHALFHCPHARQLWEA-MSDDMQLNPL 994
>gb|EPS60183.1| hypothetical protein M569_14621, partial [Genlisea aurea]
Length = 307
Score = 71.6 bits (174), Expect = 1e-10
Identities = 44/145 (30%), Positives = 59/145 (40%), Gaps = 13/145 (8%)
Frame = +2
Query: 50 VCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDSPK-WHPSKTGEFSTKSLYS 226
V +L WN L+ FHP D W+ +K G +ST S Y
Sbjct: 163 VADLFILGQRRWNQPLIRRMFHPIDANLILQLPLAHHHADDLLIWNYTKNGRYSTASGYH 222
Query: 227 LIK-----------PSSNSSNIPWNKVWNMRTSPSVRLFVYKCINNMLPL-TSHPSRFTD 370
L++ SS S W +WN P V F+++ +N++PL T R
Sbjct: 223 LLRNAQDMWNSRESTSSTGSTKFWTTLWNFSAPPKVLFFIWRLCSNIIPLKTELQRRHIS 282
Query: 371 VSNDCTFCGHTGETMEHLFFHCPFA 445
S+DC CG ET HLF C FA
Sbjct: 283 ASDDCAMCGLRPETWRHLFVECEFA 307
>gb|EPS65988.1| hypothetical protein M569_08791, partial [Genlisea aurea]
Length = 307
Score = 71.2 bits (173), Expect = 2e-10
Identities = 44/145 (30%), Positives = 59/145 (40%), Gaps = 13/145 (8%)
Frame = +2
Query: 50 VCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDSPK-WHPSKTGEFSTKSLYS 226
V +L WN L+ FHP D W+ +K G +ST S Y
Sbjct: 163 VTDLFIPGQRRWNQPLIRRMFHPINANLILQLPLAHHQADDLLIWNYTKNGRYSTASGYH 222
Query: 227 LIK-----------PSSNSSNIPWNKVWNMRTSPSVRLFVYKCINNMLPL-TSHPSRFTD 370
L++ SS S W +WN P V F+++ +N++PL T R
Sbjct: 223 LLRNAQDMWNSRESTSSTGSTKFWTTLWNFSAPPKVLFFIWRLCSNIIPLKTELQRRHIS 282
Query: 371 VSNDCTFCGHTGETMEHLFFHCPFA 445
S+DC CG ET HLF C FA
Sbjct: 283 ASDDCAMCGLWPETWRHLFVECKFA 307
>gb|EEC79285.1| hypothetical protein OsI_20087 [Oryza sativa Indica Group]
gi|218196859|gb|EEC79286.1| hypothetical protein
OsI_20088 [Oryza sativa Indica Group]
Length = 216
Score = 71.2 bits (173), Expect = 2e-10
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 17/155 (10%)
Frame = +2
Query: 44 TRVCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDSPKWHPSKTGEFSTKSLY 223
T+V ELID + W+ L++ F P D P WH G FS KS Y
Sbjct: 19 TKVVELIDPGTGWWDEQLVNDLFWPEDAATILATQVDENLEDWPTWHFDSKGLFSVKSAY 78
Query: 224 SLIKP----------------SSNSSNIPWNKVWNMRTSPSVRLFVYKCINNMLPLTSH- 352
L +S++ + W K+WNM +++FV++ +N LP+ +
Sbjct: 79 KLAVQIREKEKCRDASGSSLNTSHADTLQWEKIWNMEVPNKIKMFVWRLAHNSLPVRCNI 138
Query: 353 PSRFTDVSNDCTFCGHTGETMEHLFFHCPFARSVW 457
R + N C C E HLF C + W
Sbjct: 139 RRRGMESDNLCPMCNRFDEDCGHLFLKCKGVKECW 173
>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1188
Score = 69.7 bits (169), Expect = 4e-10
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Frame = +2
Query: 50 VCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXX-DSPKWHPSKTGEFSTKSLYS 226
V +L+D + SW+ ++ F P D W+P K G+FS +S Y
Sbjct: 774 VADLLDQNG-SWDRDVISQLFWPLDGEIIKSIRLSSRQDEDFIAWYPDKMGQFSIRSAYM 832
Query: 227 LI----------KPSSNSSNIPWNKVWNMRTSPSVRLFVYKCINNMLP-LTSHPSRFTDV 373
L S N + WN VW V++F ++ I+N LP + + R ++
Sbjct: 833 LAVQLANAGESSSSSGNDTKKVWNHVWKCNIPQKVKVFSWRAISNCLPTMVNKKKRNPEL 892
Query: 374 SNDCTFCGHTGETMEHLFFHCPFARSVW 457
S+ C+FCG E + H + CP AR W
Sbjct: 893 SDVCSFCGLEPEDVAHALWRCPHARRYW 920
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 69.7 bits (169), Expect = 4e-10
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Frame = +2
Query: 50 VCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDSPKWHPSKTGEFSTKSLYSL 229
V +LI + SWN+ + DS W P K+GE++TK+ Y+L
Sbjct: 896 VHDLICHDVKSWNVEAIRKHLPQYEDQIRKITINALPLQDSLVWLPVKSGEYTTKTGYAL 955
Query: 230 IKPSS---NSSNIPWNK-VWNMRTSPSVRLFVYKCINNMLPLTSHPSRFT-DVSNDCTFC 394
K +S + + W K +W + TSP V+ F++K + LP+ SR + C C
Sbjct: 956 AKLNSFPASQLDFNWQKNIWKIHTSPKVKHFLWKAMKGALPVGEALSRRNIEAEVTCKRC 1015
Query: 395 GHTGETMEHLFFHCPFARSVW 457
G T E+ HL CP+A+ VW
Sbjct: 1016 GQT-ESSLHLMLLCPYAKKVW 1035
>ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [Sorghum bicolor]
gi|241941323|gb|EES14468.1| hypothetical protein
SORBIDRAFT_07g002160 [Sorghum bicolor]
Length = 469
Score = 69.3 bits (168), Expect = 6e-10
Identities = 45/160 (28%), Positives = 62/160 (38%), Gaps = 21/160 (13%)
Frame = +2
Query: 47 RVCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDSPKWHPSKTGEFSTKSLY- 223
+V ELID S W+ L+ F D+ WH G+FS KS Y
Sbjct: 124 KVSELIDPISGEWDRNLVTDIFWEADVKNILSIPLKNEMEDTLAWHYDPKGDFSVKSAYH 183
Query: 224 -------------------SLIKPSSNSSNIPWNKVWNMRTSPSVRLFVYKCINNMLPLT 346
SLI P +N+ W+K+W + P V+LF ++ +N LPL
Sbjct: 184 VLTDMKELSKRRQIGEASASLISPCNNN----WHKIWKLHCPPKVKLFFWRFTHNSLPLR 239
Query: 347 SH-PSRFTDVSNDCTFCGHTGETMEHLFFHCPFARSVWFA 463
+ R D+ C C E H F C F + W A
Sbjct: 240 MNILRRGMDIDTRCPVCWRLNEDGGHCFLRCKFVKKCWRA 279
>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 69.3 bits (168), Expect = 6e-10
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 12/152 (7%)
Frame = +2
Query: 47 RVCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDSPKWHPSKTGEFSTKSLYS 226
+V +LI+ W LL F+P D W +KTGE+S KS Y
Sbjct: 736 KVNDLINFEDRCWKRDLLEELFYPTDVELITKRNPVVNMDDFWVWLHAKTGEYSVKSGYW 795
Query: 227 LIKPSSN-----------SSNIPWNKVWNMRTSPSVRLFVYKCINNMLPLTSHP-SRFTD 370
L S+ S+N +VW+ ++SP +++F+++ ++ LP+ R
Sbjct: 796 LAFQSNKLDLIQQANLLPSTNGLKEQVWSTKSSPKIKMFLWRILSAALPVADQIIRRGMS 855
Query: 371 VSNDCTFCGHTGETMEHLFFHCPFARSVWFAS 466
+ C CG GE+ H+ F C AR VW S
Sbjct: 856 IDPRCQICGDEGESTNHVLFTCSMARQVWALS 887
>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 69.3 bits (168), Expect = 6e-10
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Frame = +2
Query: 50 VCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDSPKWHPSKTGEFSTKSLY-- 223
V +LID W L L F P D W +K+G++S K Y
Sbjct: 809 VSDLIDYEKRDWRLDKLEEQFFPDDVVKIRENRPVVSLDDFWIWKHNKSGDYSVKLGYWL 868
Query: 224 ------------SLIKPSSNSSNIPWNKVWNMRTSPSVRLFVYKCINNMLPLTSHPS-RF 364
++++PS N +VW ++T P +++F++K ++ +P+ S R
Sbjct: 869 ASNQNLGQVAIEAMMQPSLNDLK---TQVWKLQTEPKIKVFLWKVLSGAIPVVDLLSYRG 925
Query: 365 TDVSNDCTFCGHTGETMEHLFFHCPFARSVWFAS 466
+ + C CG GE+++H+ F C F R VW S
Sbjct: 926 MKLDSRCQTCGCEGESIQHVLFSCSFPRQVWAMS 959
>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1094
Score = 69.3 bits (168), Expect = 6e-10
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Frame = +2
Query: 47 RVCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXXDSPKWHPSKTGEFSTKSLYS 226
+V +LID S +WNL +L F DS W + G ++ KS Y
Sbjct: 689 KVSQLIDPFSRNWNLNMLRDLFPWKEIQIICQQRPMASRQDSFCWFGTNHGLYTVKSEYD 748
Query: 227 LIKPSSN-----------SSNIPWNKVWNMRTSPSVRLFVYKCINNMLPLTSH-PSRFTD 370
L + S N + K+WN+ ++P +++F++K + + + +R
Sbjct: 749 LCSRQVHKQMFKEAEEQPSLNPLFGKIWNLNSAPKIKVFLWKVLKGAVAVEDRLRTRGVL 808
Query: 371 VSNDCTFCGHTGETMEHLFFHCPFARSVW 457
+ + C+ C ET+ H+ F CP AR VW
Sbjct: 809 IEDGCSMCPEKNETLNHILFQCPLARQVW 837
>gb|ABN07997.1| contains similarity to reverse trancriptase , related [Medicago
truncatula]
Length = 407
Score = 68.6 bits (166), Expect = 1e-09
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Frame = +2
Query: 47 RVCELIDNSSNSWNLTLLHASFHPXXXXXXXXXXXXXXXX-DSPKWHPSKTGEFSTKSLY 223
RV +LI+N + WN +L F DS W + TG +S KS Y
Sbjct: 240 RVKDLINNQESLWNKVILEDQFISINIDQISHIPLVNTTNPDSLMWMHNPTGIYSVKSGY 299
Query: 224 SLIKP----------SSNSSNIPWNKVWNMRTSPSVRLFVYKCINNMLPLTSH-PSRFTD 370
+ ++ +S+ + W K+W++ T P ++ +++ +N+ LP+ S R
Sbjct: 300 NTLRTWQTQQINNTSTSSDETLIWKKIWSLHTIPRHKVLLWRILNDSLPVRSSLRKRGIQ 359
Query: 371 VSNDCTFCGHTGETMEHLFFHCPFARSVWFAS 466
C C ET+ HLF CP ++ VWF S
Sbjct: 360 CYPLCPRCHSKTETITHLFMSCPLSKRVWFGS 391
>ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thaliana]
gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
thaliana] gi|7269807|emb|CAB79667.1| putative protein
[Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
putative reverse transcriptase/RNA-dependent DNA
polymerase [Arabidopsis thaliana]
gi|332660185|gb|AEE85585.1| ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 575
Score = 68.2 bits (165), Expect = 1e-09
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Frame = +2
Query: 47 RVCELIDNSSNSWNLTLLHASF-HPXXXXXXXXXXXXXXXXDSPKWHPSKTGEFSTKSLY 223
+V +LID S W ++ F DS W + +G+++ KS Y
Sbjct: 170 KVSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGY 229
Query: 224 SLIKPSSNSSNIP-----------WNKVWNMRTSPSVRLFVYKCINNMLPLTSHPS-RFT 367
++ N + P + K+W +TSP ++ F++KC++N LP+ + R
Sbjct: 230 WVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHL 289
Query: 368 DVSNDCTFCGHTGETMEHLFFHCPFARSVWFAS 466
+ C C ET+ HL F C FAR W S
Sbjct: 290 SKESACIRCPSCKETVNHLLFKCTFARLTWAIS 322