BLASTX nr result
ID: Papaver27_contig00048786
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00048786
(2676 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A... 48 2e-10
ref|XP_007213453.1| hypothetical protein PRUPE_ppa024777mg, part... 53 7e-08
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica... 65 1e-07
gb|ABN08796.1| Ribonuclease H [Medicago truncatula] 65 1e-07
gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris] 59 2e-07
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 62 1e-06
ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein A... 62 1e-06
>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 364
Score = 48.1 bits (113), Expect(2) = 2e-10
Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = -1
Query: 2286 GAAGYGFICRKRNGVFEFAVSGGLGIASNFLAEIFAVICAGEWVVVHQMLNVCFRSDSKS 2107
G +GYG I R +G F A + L I ++ AE+ AVI A E V ++ DS
Sbjct: 234 GKSGYGGIFRDFHGSFLGAFASNLEILNSVDAEVMAVIQAIELAWVRDWEHIWLEVDSII 293
Query: 2106 VISAFQTGN-VPWWVSTRWNKVKSELLSWYF--LHSFREINTSADLLAKKG 1963
V++ Q + VPW + W + F H FRE N AD LA G
Sbjct: 294 VLNFLQDPHLVPWRLRVGWGNFLHRISQMNFRSSHIFREGNQVADALANMG 344
Score = 46.6 bits (109), Expect(2) = 2e-10
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = -2
Query: 2648 PKSFEDILMLAK-NKSPAVKEIWKVAALVTMKEIWFMRNGMVYEEEKFNSDALKKRILSF 2472
P++ D+L +S +KEIW + T+ IW RN M ++ DA+++ I+
Sbjct: 112 PQNLVDLLYYGGVGRSHQLKEIWLICYTTTLWFIWKARNKMRHDNCTIVVDAVRQLIMGH 171
Query: 2471 TKDSDVRMSEAIWNFAYDLQIIKAFELKCRRVKTVKVTEIFFSLP 2337
K + + N +L+++K F L CR + ++TE+ + P
Sbjct: 172 VKTASKLALGCMSNSLTELRVLKKFGLLCRPHRAPRITEVNWHPP 216
>ref|XP_007213453.1| hypothetical protein PRUPE_ppa024777mg, partial [Prunus persica]
gi|462409318|gb|EMJ14652.1| hypothetical protein
PRUPE_ppa024777mg, partial [Prunus persica]
Length = 465
Score = 53.1 bits (126), Expect(2) = 7e-08
Identities = 47/143 (32%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Frame = -1
Query: 2304 ASRGNPGAAGYGFICRKRNGVFEFAVSGGLGIASNFLAEIFAVICAGEWVVVHQMLNVCF 2125
A + + G AG G + R G A S L + S AE+ AVI A E +H N+
Sbjct: 321 ACKRDSGKAGSGGVFRNYQGHVLGAFSANLDVPSGVHAEVLAVIKAIELAWLHAWHNIWI 380
Query: 2124 RSDSKSVISAFQTGN-VPWWVSTRWNK--VKSELLSWYFLHSFREINTSADLLAKK---G 1963
+DS V F++ + VPW + W ++ + +S+ H FRE N D LA G
Sbjct: 381 ETDSLLVTKFFRSPHLVPWRLRVDWQNCLLRLQHMSFKISHIFREGNHDVDALANHGALG 440
Query: 1962 SGLDKGDRRIYRRYPNFITKLES 1894
SGL D P+FI L S
Sbjct: 441 SGLTWWDTA-----PSFIFALLS 458
Score = 33.1 bits (74), Expect(2) = 7e-08
Identities = 22/95 (23%), Positives = 44/95 (46%)
Frame = -2
Query: 2621 LAKNKSPAVKEIWKVAALVTMKEIWFMRNGMVYEEEKFNSDALKKRILSFTKDSDVRMSE 2442
L+ + SP + ++W + + IW +RN + +EE+ + + I++ S
Sbjct: 215 LSAHFSPQLMDLWLLMFRTIVWLIWDLRNKLRFEEKVSTVSSNCRTIINHVPASSPLARG 274
Query: 2441 AIWNFAYDLQIIKAFELKCRRVKTVKVTEIFFSLP 2337
I N +DL II++ + R K+ E+ + P
Sbjct: 275 HILNKVHDLCIIRSIGVHYRPRPNSKIVEVTWHPP 309
>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
protein ccsA [Medicago truncatula]
Length = 666
Score = 65.5 bits (158), Expect = 1e-07
Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Frame = -1
Query: 2304 ASRGNPGAAGYGFICRKRNGVFEFAVSGGLGIASNFLAEIFAVICAGEWVVVHQMLNVCF 2125
+S G G + R N F A+S +G A+ AE A + A E Q+++VC
Sbjct: 231 SSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCL 290
Query: 2124 RSDSKSVISAFQTG-NVPWWVSTRWNKVKS--ELLSWYFLHSFREINTSADLLAKKGSGL 1954
+DS V++AF G VPW + RW + +S +H RE N AD LAK G GL
Sbjct: 291 ETDSLKVVNAFNKGLGVPWQMRARWQNCWDFCDSISCSCVHILREGNMVADALAKHGQGL 350
Query: 1953 DKGDRRIYRRYPNFITKL 1900
+++ P FI L
Sbjct: 351 SLYYTQLWTSPPPFIYHL 368
>gb|ABN08796.1| Ribonuclease H [Medicago truncatula]
Length = 221
Score = 65.5 bits (158), Expect = 1e-07
Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Frame = -1
Query: 2304 ASRGNPGAAGYGFICRKRNGVFEFAVSGGLGIASNFLAEIFAVICAGEWVVVHQMLNVCF 2125
+S G G + R N F A+S +G A+ AE A + A E Q+++VC
Sbjct: 68 SSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCL 127
Query: 2124 RSDSKSVISAFQTG-NVPWWVSTRWNKVKS--ELLSWYFLHSFREINTSADLLAKKGSGL 1954
+DS V++AF G VPW + RW + +S +H RE N AD LAK G GL
Sbjct: 128 ETDSLKVVNAFNKGLGVPWQMRARWQNCWDFCDSISCSCVHILREGNMVADALAKHGQGL 187
Query: 1953 DKGDRRIYRRYPNFITKL 1900
+++ P FI L
Sbjct: 188 SLYYTQLWTSPPPFIYHL 205
>gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris]
Length = 234
Score = 58.9 bits (141), Expect(2) = 2e-07
Identities = 44/117 (37%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Frame = -1
Query: 2304 ASRGNPGAAGYGFICRKRNGVFEFAVSGGLGIASNFLAEIFAVICAGEWVVVHQMLNVCF 2125
A+RG PG A G I R G F A S L + + +AE + VI A E + NV
Sbjct: 84 AARGYPGLATCGGIFRGSMGEFIGAFSAFLEVQTALVAEFYGVIHAMEEAQKMGLTNVWL 143
Query: 2124 RSDSKSVISAFQT-GNVPWWVSTRWNKVKS--ELLSWYFLHSFREINTSADLLAKKG 1963
DS V +AF NVPW + RWN + + + H FRE N AD LA G
Sbjct: 144 ECDSALVCAAFTARTNVPWMLQNRWNTCLNFCGTIRFRVTHIFREGNACADKLANLG 200
Score = 25.8 bits (55), Expect(2) = 2e-07
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = -2
Query: 2552 IWFMRNGMVYEEEKFNSDALK--KRILSFTKDSDVRMSEAIWNFAYDLQIIKAFELKCRR 2379
IW MRN ++++ S A+ K + +S ++ N D +IK F +K R
Sbjct: 2 IWRMRNYARFQDKIGVSKAISIIKDLTCLVGNSS---KASMKNDMLDFNVIKFFGIKTRS 58
Query: 2378 VKTVKVTEIFFSLPDPTYFLLCCD 2307
K ++ I + P P + + D
Sbjct: 59 GKVLRPLPIRWEFPSPGWVKINTD 82
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 62.0 bits (149), Expect = 1e-06
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Frame = -1
Query: 2304 ASRGNPGAAGYGFICRKRNGVFEFAVSGGLGIASNFLAEIFAVICAGEWVVVHQMLNVCF 2125
A RGNPG + +GF R G +A + G+GIA+N AE A++ A +M V
Sbjct: 715 ACRGNPGLSSFGFCIRDDKGDLIYAKAKGIGIATNMEAETVAILTALRECSNRKMQKVII 774
Query: 2124 RSDSKSVISAF-QTGNVPWWVSTRWNKVKS--ELLSWYFLHSFREINTSADLLA 1972
+DS S+ QT VPW ++ + +++ E + H FRE N+ AD LA
Sbjct: 775 ETDSLSLKKIIQQTWRVPWKIAEKVEEIREIMEKIKAKITHIFREGNSLADSLA 828
>ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 197
Score = 62.0 bits (149), Expect = 1e-06
Identities = 56/154 (36%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Frame = -1
Query: 2304 ASRGNPGAAGYGFICRKRNGVFEFAVSGGLGIASNFLAEIFAVICAGEWVVVHQMLNVCF 2125
A+RG+PG AG+G I R G SG LGIA+ AE+ AVI A + ++
Sbjct: 46 AARGSPGLAGFGGIFRDHLGQVLCCFSGNLGIATALEAELQAVIHAIQMASQRGWRSLWI 105
Query: 2124 RSDSKSVI---SAFQTGNVPWWVSTRWNKVKSELLSW--YFLHSFREINTSADLLAKKGS 1960
SDS VI S+FQ +VPW +T W ++ L S H +RE N AD LA G+
Sbjct: 106 ESDSTLVIHFLSSFQV-DVPWRFTTEWFNCRTILTSMTVKVSHIYREGNRVADCLANFGA 164
Query: 1959 GLDKGDRRIYRRYPNFITKLESPDV---PYYIFS 1867
D + YP S D+ P Y FS
Sbjct: 165 --DNAGVHWWDSYPPCAITAYSRDLADFPNYRFS 196