BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00048600
         (986 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    94   9e-17
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...    92   2e-16
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...    91   6e-16
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...    89   2e-15
ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein A...    88   5e-15
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...    86   2e-14
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...    85   4e-14
ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein A...    85   5e-14
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    85   5e-14
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...    84   9e-14
ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ...    84   1e-13
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...    82   3e-13
ref|XP_004247265.1| PREDICTED: putative ribonuclease H protein A...    82   3e-13
ref|XP_006492639.1| PREDICTED: putative ribonuclease H protein A...    82   4e-13
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    81   7e-13
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A...    80   1e-12
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...    80   2e-12
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...    79   2e-12
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A...    79   2e-12
ref|XP_004235425.1| PREDICTED: putative ribonuclease H protein A...    79   2e-12

>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 872

 Score = 94.0 bits (232), Expect = 9e-17
 Identities = 75/328 (22%), Positives = 134/328 (40%), Gaps = 8/328 (2%)
 Frame = -3

Query: 981  LFLWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAPETAEHILLTCRFANETWDLLFHLHE 802
            L  WK +   + ++ LL +  +     C  C  + E+ +HI L C FA   W+   ++ E
Sbjct: 542  LHAWKVMRGTVISYHLLQRRGVALVSRCEFCGNSTESLDHIFLHCSFAASVWNHFIYIFE 601

Query: 801  TE--PSFLHQRPQPLNPSITVNQLLQLKQSKDATTSFCFT--LWTLWLARNDPIYGRKHK 634
                P+ +    +  +  + +++  QLK+        CFT  LW +W ARN   +  +  
Sbjct: 602  IGLVPNTI---AEVFSLGLAMDRSPQLKE----LWLICFTSILWYIWHARNQIRFDSRTF 654

Query: 633  PPSDIVKL-ENHMHQEYNWANSVLPSPLRGMTATTQDTT---SHRMTRTIQDGWRPPETH 466
              + + +L   H+      A   + + +  +           S R+ R ++  W PP   
Sbjct: 655  SVAGVCRLVSRHIQASSRLATGHMHNTIHDLCILKSFGACCRSRRIPRMVEVIWHPPSIG 714

Query: 465  WIKINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXXXLRTVTL 286
            WIKIN+D A +   G  G G + R      + A    + I              +    +
Sbjct: 715  WIKINSDGAWKHEEGIGGFGAVFRYYKGQFVGAFASHIDIPSSIAAKVMVVITAIELAWV 774

Query: 285  YQWTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYREANQAAD 106
              W  +++E D  T+  +I   +  PW LR        R+  +   +  H +RE N+ AD
Sbjct: 775  RDWKHVWLEVDFSTVLDYIRSPSLVPWQLRVRWLNCLYRISTMT-FKSSHIFREGNRVAD 833

Query: 105  ALANHSADNNQQGVLQTKIWKHTVPNFL 22
            ALANH    +++      +W    P+F+
Sbjct: 834  ALANHGTSMSEE------VWWDVPPSFI 855


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 78/301 (25%), Positives = 122/301 (40%), Gaps = 5/301 (1%)
 Frame = -3

Query: 975  LWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAP-ETAEHILLTCRFANETWDLLFHLHET 799
            LW+AI   LPT   L    +  SD C  C+    +T EH L +  FA   W         
Sbjct: 908  LWRAIRGKLPTNEKLLSFGIEPSD-CHCCHSPGIDTIEHTLNSGDFAKNVWKYFAISLGI 966

Query: 798  EPSFLHQRPQPLNPSITVNQLLQLKQSKDATTSFCFTLWTLWLARNDPIYGRKHKPPSDI 619
               FL  R   +      +     K    +T    F  W LW  R    YG K    S+I
Sbjct: 967  RTDFLPLRNMIMRWWSAPHNNEAHKLILHSTP--IFICWNLWKNRCAVKYGGKQ---SNI 1021

Query: 618  VKLENHMHQE-YNWANSVLPS---PLRGMTATTQDTTSHRMTRTIQDGWRPPETHWIKIN 451
             ++++ +  + +   ++V P    PLR            + T+     W  P   W+K+N
Sbjct: 1022 ARVKHLVILDNFKLLHTVFPYISWPLRWNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLN 1081

Query: 450  TDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXXXLRTVTLYQWTK 271
            TD +A  +PGSIG G + R+    +I+A   PLG               +      ++ +
Sbjct: 1082 TDGSALSNPGSIGAGDVIRNHLGEIILAYSTPLGTGTNNQAEVEAAIFGIAWCIHMKYNQ 1141

Query: 270  IYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYREANQAADALANH 91
            + +E DSQ L  +       PW +   + ++      + H + +H +REAN  AD L+ H
Sbjct: 1142 VILEVDSQLLVDWFKNNKLIPWNISSQMQQLHQLATQLDHFKCIHTFREANFVADVLSKH 1201

Query: 90   S 88
            S
Sbjct: 1202 S 1202


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score = 91.3 bits (225), Expect = 6e-16
 Identities = 79/321 (24%), Positives = 124/321 (38%), Gaps = 18/321 (5%)
 Frame = -3

Query: 978  FLWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAPE-TAEHILLTCRFANETWDLLFHLHE 802
            F+W+     + T   L K+ +     C  C+   E T  H+  T     + W    H   
Sbjct: 537  FMWRVWKRRIATDDNLKKMRINIVSRCWCCDRKKEETMTHLFPTAPITYKLWRYFAHFAG 596

Query: 801  TEPSFLHQRPQPLNPSITVNQLLQLKQSKDATTSF--------CFTLWTLWLARN----D 658
                 +H           + QL+      +AT              +WTLW  RN    D
Sbjct: 597  INIDGMH-----------LQQLIISWWKHEATPKLQGIYKAIPAIIMWTLWKRRNALKHD 645

Query: 657  PIYGRKHKPPSDIVKLENHMHQEYNWANSVLPSPLRGMTATTQDTTSH-----RMTRTIQ 493
                 +      I  +   +  ++ W        ++ M  T Q          R    ++
Sbjct: 646  SSISWERMVEMVIEVVRKMVKSQFPW--------IKNMRWTWQAIIQRLNQYKRKIHVLR 697

Query: 492  DGWRPPETHWIKINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXX 313
              W+PP+ H++K NTD A RG+PG    GF  RD    +I A  + +GI           
Sbjct: 698  VTWKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDDKGDLIYAKAKGIGIATNMEAETVAI 757

Query: 312  XXXLRTVTLYQWTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHN 133
               LR  +  +  K+ IETDS +L   I Q    PW + + + EI   +E I   +I H 
Sbjct: 758  LTALRECSNRKMQKVIIETDSLSLKKIIQQTWRVPWKIAEKVEEIREIMEKI-KAKITHI 816

Query: 132  YREANQAADALANHSADNNQQ 70
            +RE N  AD+LAN + ++  +
Sbjct: 817  FREGNSLADSLANIAIESQAE 837


>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 468

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 84/310 (27%), Positives = 127/310 (40%), Gaps = 11/310 (3%)
 Frame = -3

Query: 975  LWKAINEGLPTFTLLHKIHLTTSD-LCPRCNLAPETAEHILLTCRFANETWDLLFHL--- 808
            LW+ +   LPT   L    +      C       +T EHI  +  FA   W+        
Sbjct: 128  LWRTLKGKLPTNEKLSNFGIEPLPCFCCFDRAGMDTIEHIFNSGPFATIVWNFFAATAGI 187

Query: 807  ---HETEPSFLHQRPQPLNPSITVNQLLQLKQSKDATTSFCFTLWTLWLARNDPIYGRKH 637
               H T P+ + Q      P+   ++LL       AT    F  W LW  R    YG K 
Sbjct: 188  QADHSTLPALIKQW-WTTKPNNAGHKLLL-----QATP--IFICWNLWKNRCACKYGGKG 239

Query: 636  KPPSDIVKLENHMHQE-YNWANSVLPSPLRGMTATTQDTTSHRMTRTIQD---GWRPPET 469
               ++I +++  ++++ +    +  PS       TT   TS +    I+     W  P  
Sbjct: 240  ---TNISRVKYAIYKDTFKMLKNSFPSINWPANWTTLILTSEKCVHNIKVYKVTWFKPPD 296

Query: 468  HWIKINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXXXLRTVT 289
             WIKINTD +A  + G IG G I RD    +I+A   PLG               L    
Sbjct: 297  QWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAF 356

Query: 288  LYQWTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYREANQAA 109
               +  I +E DSQ +  +I+ +  PPW L + +  +   +    + +  H +REAN  A
Sbjct: 357  ELGFKNILLELDSQLVVQWISNKIAPPWNLTNQLERLQQIIIQTQNFRCCHIFREANWVA 416

Query: 108  DALANHSADN 79
            DAL+ HS +N
Sbjct: 417  DALSKHSHNN 426


>ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 487

 Score = 88.2 bits (217), Expect = 5e-15
 Identities = 85/335 (25%), Positives = 128/335 (38%), Gaps = 7/335 (2%)
 Frame = -3

Query: 984  QLFLWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAPETAEHILLTCRFANETWDL----- 820
            +LF W  +   L T   L K      + CP C+   ETA+H+   C F  E + L     
Sbjct: 175  KLFGWLLLRGRLKTRDRLSKFGYIDDNSCPLCDSDNETADHLFGHCDFTTEVFRLAGISA 234

Query: 819  LFHLHETEPSFLHQRPQPLNPSITVNQLLQLKQSKDATTSFCFTLWTLWLARNDPIYGRK 640
            L   HE     L +        + +NQ       K          W +W ARND I+   
Sbjct: 235  LMDWHEGYLKVLRE--------MFINQ----PYDKFLFAKVLIIYWQIWKARNDTIFRDV 282

Query: 639  HKPPSDIVKLENHMHQEYNWANSVLPSPLRGMTATTQDTTSHRMTRTIQDGWRPPETHWI 460
                +++         E     +V+     G++ TT  T            W PP  ++I
Sbjct: 283  ITTATNVAATAAFHFNETALYKAVVGG---GISQTTSSTIR----------WLPPHNNFI 329

Query: 459  KINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXXXLRTVTLYQ 280
            KIN D + +G   S  GGF+ R+S  +VI+A  + LG               L       
Sbjct: 330  KINFDGSVQGR--SAAGGFVFRNSDGNVILAAAKGLGSTTIPTAEATALRDSLVKARDRG 387

Query: 279  WTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYREANQAADAL 100
            +  + +E DS+ +   I  +  PPW L+ ++ +I     +       H YREAN  ADA 
Sbjct: 388  YMNVQVEGDSKLVIDAINGKLSPPWRLQKIVQDIRTIATSFSSVCFNHVYREANFMADAF 447

Query: 99   AN--HSADNNQQGVLQTKIWKHTVPNFLKENVLND 1
            AN  H   N  +       W+   P  +   +L D
Sbjct: 448  ANEGHQLPNGHE-------WQDGYPTVVDRALLFD 475


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 78/308 (25%), Positives = 120/308 (38%), Gaps = 11/308 (3%)
 Frame = -3

Query: 978  FLWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAPETAEHILLTCRFANETWDLLFHLHET 799
            F+W+A+   LPT  LL +     S      +   +   HIL+   FA   W +   +   
Sbjct: 921  FIWRALKGKLPTNELLQRFGSAISKCYCCYSKGKDDINHILINGNFAKHIWKIHAAILGV 980

Query: 798  EPS-------FLHQRPQPLNPSITVNQLLQLKQSKDATTSFCFTLWTLWLARNDPIYGRK 640
             P+        LH R Q +N  +    L+ +  +           W LW  R    YG K
Sbjct: 981  VPANTTLRDQLLHWRNQQVNNEVH-KLLIHILPN--------VICWNLWKNRCAVKYGNK 1031

Query: 639  HKPPSDIVKLENHMHQEYNWA-NSVLPS-PLRGMTATTQDTTSH--RMTRTIQDGWRPPE 472
                S I +++  + ++       V PS P +       +   H  +  + +   W  P 
Sbjct: 1032 S---SSIHRVQYGIFKDVMQVIKIVFPSIPWQSSWNKLINIVEHCKQQYKIVLVSWNKPG 1088

Query: 471  THWIKINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXXXLRTV 292
                K+NTD +A  + G IGGG I RD    ++ A   P G               L   
Sbjct: 1089 LGTYKLNTDGSALQNSGKIGGGGILRDHQGKIVYAFSLPFGFGTNNIAEIKAALYGLEWC 1148

Query: 291  TLYQWTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYREANQA 112
              + + ++ +E DSQ L ++I  +   PW   D+I +I      I   Q  H YREAN  
Sbjct: 1149 DQHGYKRVELEVDSQLLCNWIKNKTNIPWIYEDLIQQIKQITRKIEQFQCHHIYREANIT 1208

Query: 111  ADALANHS 88
            AD L+  S
Sbjct: 1209 ADLLSKWS 1216


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 389

 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 87/317 (27%), Positives = 129/317 (40%), Gaps = 14/317 (4%)
 Frame = -3

Query: 978 FLWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAPETAEHILLTCRFANETWDLLFHLHET 799
           F+W+A+   LPT   L K      +         +  +HIL+T  FA   W +  H    
Sbjct: 49  FIWRALRSKLPTNENLLKFGKEELECYCCYRKGKDDLKHILITGNFAKYIWKI--HTKRL 106

Query: 798 EPSFLHQRPQPLNPSITVNQLLQLKQSKDATTSFCFTL-----WTLWLARNDPIYGRKHK 634
             + ++      N   T+    +L    +        L     W LW  R    YG K  
Sbjct: 107 GIAIVNT-----NLRSTLLSWRRLTSYNEVHKLILHILPNIICWNLWKNRCSAKYGNK-- 159

Query: 633 PPSDIVKLENHMHQEYN------WANSVLPSPLRGMTATTQDTTSHRMTRTIQDGWRPPE 472
            PS I ++E+ + ++        + N    S    +    +    H +  T+ +  RPPE
Sbjct: 160 -PSSIYRVESGIFKDIMQIIKAVYPNIPWQSSWERLFNLVEQCQQH-LKVTMVNWERPPE 217

Query: 471 -THWIKINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXXXLRT 295
             H  K+NTD +A+ + G IGGG I RD    +I A   PLG               L+ 
Sbjct: 218 GIH--KLNTDGSAKHNTGKIGGGGILRDHQGKLIYAFAIPLGFGTNNFAEIQAALHGLQW 275

Query: 294 VTLYQWTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYREANQ 115
              + + KI +E DS+ L  +I  ++  PW     I +I N    +   Q  H YREAN 
Sbjct: 276 CQQHGFEKIILEVDSELLHKWIINKSSVPWRCLHYIQQIQNISNKMEVFQCKHIYREANG 335

Query: 114 AADALA--NHSADNNQQ 70
            AD LA  +HS D  QQ
Sbjct: 336 TADLLAKWSHSMDIIQQ 352


>ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 399

 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 79/309 (25%), Positives = 123/309 (39%), Gaps = 7/309 (2%)
 Frame = -3

Query: 975 LWKAINEG-----LPTFTLLHKIHLTTSDLCPRCNLAPETAEHILLTCRFANETWDLLFH 811
           +W    +G     L T   L K      + CP C+   ETA+H+   C F  E + L   
Sbjct: 81  IWGPATDGRFSIKLKTTDRLSKFGYIDDNSCPLCDNDNETADHLFGHCDFTTEVFRL--- 137

Query: 810 LHETEPSFLHQRPQPLNPSITVNQLLQLKQSKDATTSFCFTLWTLWLARNDPIYGRKHKP 631
           +  + P   H+    +   + +NQ       K          W +W ARND I+      
Sbjct: 138 VGISAPMDWHKGYLKVLREMFINQ----PYDKFLFAKVLIIYWQIWKARNDTIFRDVITT 193

Query: 630 PSDIVKLENHMHQEYNWANSVLPSPLRGMTATTQDTTSHRMTRTIQDGWRPPETHWIKIN 451
            +++V        E     +V+     G++ TT  T            W PP  ++IKIN
Sbjct: 194 ATNVVATAAFHFNETALYKAVVGG---GISQTTPSTIR----------WLPPHNNFIKIN 240

Query: 450 TDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXXXLRTVTLYQWTK 271
            D + +G   S  GGF+ R+S  +VI+A  + LG               L       +  
Sbjct: 241 FDGSVQGR--SAVGGFVFRNSDGNVILAAAKGLGSTTIPTAEATALRDNLVKARDRGYMN 298

Query: 270 IYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYREANQAADALAN- 94
           + +E DS+ +   I  +  PPW L+ ++ +I     +       H YREAN  ADA AN 
Sbjct: 299 VQVEGDSKLVIDAINGKLSPPWRLQKIVQDIRTIATSFSSVCFNHVYREANFVADAFANE 358

Query: 93  -HSADNNQQ 70
            H   N ++
Sbjct: 359 GHQLPNGRE 367


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 75/299 (25%), Positives = 122/299 (40%), Gaps = 2/299 (0%)
 Frame = -3

Query: 978  FLWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAPETAEHILLTCRFANETWDLLFHLHET 799
            FLW+ +N  L   + L   HL     C RC    ET  H+L  C FA  TW +       
Sbjct: 1066 FLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPLPAPP 1125

Query: 798  EPSFLHQRPQPLNPSITVNQLLQLKQSKDATTSFCFTLWTLWLARNDPIY-GRKHKPPSD 622
               +     + ++  ++V++     +  D      + LW LW  RND ++ GR+   P  
Sbjct: 1126 GGEWAESLFRNMHHVLSVHK--SQPEESDHHALIPWILWRLWKNRNDLVFKGREFTAPQV 1183

Query: 621  IVKLENHMHQEYNWANSVLPSPLRGMTATTQDTTSHRMTRTIQDGWRPPETHWIKINTDD 442
            I+K    M     W N   P P   +T++T+D       R ++  W+PP   W+K NTD 
Sbjct: 1184 ILKATEDMDA---WNNRKEPQP--QVTSSTRD-------RCVK--WQPPSHGWVKCNTDG 1229

Query: 441  AARGHPGSIGGGFICRDSATSVI-VAMDQPLGIXXXXXXXXXXXXXXLRTVTLYQWTKIY 265
            A     G+ G G++ R+    ++ + +                    + +++ + + ++ 
Sbjct: 1230 AWSKDLGNCGVGWVLRNHTGRLLWLGLRALPSQQSVLETEVEALRWAVLSLSRFNYRRVI 1289

Query: 264  IETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYREANQAADALANHS 88
             E+DSQ L   I    + P  L   I +I N L      +     RE N  AD  A  S
Sbjct: 1290 FESDSQYLVSLIQNEMDIP-SLAPRIQDIRNLLRHFEEVKFQFTRREGNNVADRTARES 1347


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score = 84.0 bits (206), Expect = 9e-14
 Identities = 78/312 (25%), Positives = 124/312 (39%), Gaps = 15/312 (4%)
 Frame = -3

Query: 978  FLWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAPETAEHILLTCRFANETWDLLFHLHET 799
            F+W+A+   LPT   L +I    SD     N   +   HIL+   FA   W +    + +
Sbjct: 1114 FIWRALRGKLPTNENLQRIGKNLSDCYCCYNKGKDDINHILINGNFAKYIWKI----YSS 1169

Query: 798  EPSFLHQRPQPLNPSITVNQLLQLKQSKDATTSFC---------FTLWTLWLARNDPIYG 646
                L     P+N   T+  LL   +++  T             F  W LW  R    YG
Sbjct: 1170 AVGVL-----PINT--TLRDLLLQWRNQQYTNEVHKLLIHILPNFICWNLWKNRCAVKYG 1222

Query: 645  RKHKPPSDIVKLENHMHQEYNWANSVLPSPLRGMTA------TTQDTTSHRMTRTIQDGW 484
             K+   S I +++  + +      +++   +   T+        +    H     ++  W
Sbjct: 1223 LKN---SSIYRVQYGIFKNIMQVITIVFPSIPWQTSWNNLINIVEQCKQHYKILIVK--W 1277

Query: 483  RPPETHWIKINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXXX 304
              P+    K+NTD +A  + G IGGG I RD+   +I A   P G               
Sbjct: 1278 NKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKIIYAFSLPFGFGTNNFAEIKAALHG 1337

Query: 303  LRTVTLYQWTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYRE 124
            L     + + KI +E DS+ L ++I      PW   ++I +I   +  +   Q  H YRE
Sbjct: 1338 LDWCEQHGYKKIELEVDSKLLCNWINSNINIPWRYEELIQQIHQIIRKMDQFQCHHIYRE 1397

Query: 123  ANQAADALANHS 88
            AN  AD L+  S
Sbjct: 1398 ANCTADLLSKWS 1409


>ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|3184275|gb|AAC18922.1| putative reverse transcriptase
           [Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase
           H domain-containing protein [Arabidopsis thaliana]
          Length = 365

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 75/309 (24%), Positives = 123/309 (39%), Gaps = 13/309 (4%)
 Frame = -3

Query: 978 FLWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAPETAEHILLTCRFANETWDLLFHLHET 799
           FLW+ +   L T T L   ++    +C RC +  ET  HI+  C +    W         
Sbjct: 49  FLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQSVW------RSA 102

Query: 798 EPSFLHQRPQPLNPSITVNQLLQLKQSKDATTSFC------FTLWTLWLARNDPIYGRKH 637
                +Q   P +    +N+L+QL  SK  TT+        + +W LW +RN  ++ +K 
Sbjct: 103 NIIIGNQWGPPSSFEDNLNRLIQL--SKTQTTNSLDRFLPFWIMWRLWKSRNVFLFQQKC 160

Query: 636 KPPSDIVKLENHMHQEYNWANSVLPSPLRGMTATTQDTTSHRMTRTIQDG------WRPP 475
           + P    +    +     W N+           TT++T  H  T  IQ        W PP
Sbjct: 161 QSPD--YEARKGIQDATEWLNA---------NETTENTNVHVATNPIQTSRRDSSQWNPP 209

Query: 474 ETHWIKINTDDA-ARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXXXLR 298
              W+K N D    +G P +  G  I   +   V+    +                  L+
Sbjct: 210 PEGWVKCNFDSGYTQGSPYTRSGWTIRECNGHIVLCGNAKLQSSTCSLHAEALGFLHALQ 269

Query: 297 TVTLYQWTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYREAN 118
            +  +    ++ E+DS++L   I    E    L  +I +I + +  +P+  +    RE N
Sbjct: 270 VIWAHGLRYVWFESDSKSLVTLI-NNGEDHSLLGTLIYDIRHWMLKLPYCSLEFVNRERN 328

Query: 117 QAADALANH 91
            AADALA+H
Sbjct: 329 SAADALASH 337


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 74/308 (24%), Positives = 122/308 (39%), Gaps = 11/308 (3%)
 Frame = -3

Query: 978  FLWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAPETAEHILLTCRFANETWDL------L 817
            F+W+A+   LPT   L +I    SD         +   HIL+   FA   W +      +
Sbjct: 993  FIWRALKGKLPTNEFLQRIGSDISDYSCCYRKGKDDINHILINGNFAKYIWKIHAATLGI 1052

Query: 816  FHLHET-EPSFLHQRPQPLNPSITVNQLLQLKQSKDATTSFCFTLWTLWLARNDPIYGRK 640
              ++ T     LH R Q +N  +    L+ +  +           W LW  R    YG+K
Sbjct: 1053 IPVNTTLRAQLLHWRNQQVNNEVH-KLLIHILPN--------IICWNLWKNRCAVKYGKK 1103

Query: 639  HKPPSDIVKLENHMHQEYNWA-NSVLPS-PLRGMTATTQDTTSH--RMTRTIQDGWRPPE 472
                S I +++  + +E       V PS P +       +   H  +  + +   W  P 
Sbjct: 1104 R---SSIHRVKYGIFKEVMQVIKLVFPSIPWQSNWNNLVNIIEHCSQQYKIVLVSWNKPA 1160

Query: 471  THWIKINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXXXLRTV 292
                K+NTD +A  + G IGGG   RD    ++ A   P G+              +   
Sbjct: 1161 LGTYKLNTDGSAIQNSGKIGGGGNLRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMEWC 1220

Query: 291  TLYQWTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYREANQA 112
              + + K+ +E +S+ L+++I    + PW   D++ +I      +      H YREAN  
Sbjct: 1221 EQHGYKKVELEVNSELLYNWIKNTTKIPWRYEDLVQQIQQISMKMEQFHCHHIYREANNT 1280

Query: 111  ADALANHS 88
            AD L+  S
Sbjct: 1281 ADLLSKWS 1288


>ref|XP_004247265.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 193

 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 44/133 (33%), Positives = 68/133 (51%)
 Frame = -3

Query: 486 WRPPETHWIKINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXX 307
           W  P+  ++K+NTD +A  +PG  GGG I RD   ++I A   PLGI             
Sbjct: 16  WEKPQQPFLKLNTDGSALNNPGRNGGGGIVRDYQGNMIYAFTIPLGIGTNNQEKIQAVSH 75

Query: 306 XLRTVTLYQWTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYR 127
            L     +++ KI++E D + + H ++ +   PW L+  I EI   +  +   +I H YR
Sbjct: 76  GLDWCIQHRYRKIHLEVDLELVIHLLSNQTNYPWNLQPYIREIHRIVHQLERFKITHVYR 135

Query: 126 EANQAADALANHS 88
           EAN  AD L+ +S
Sbjct: 136 EANNTADRLSKYS 148


>ref|XP_006492639.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
            sinensis]
          Length = 569

 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 76/302 (25%), Positives = 121/302 (40%), Gaps = 5/302 (1%)
 Frame = -3

Query: 984  QLFLWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAPETAEHILLTCRFANETWDLLFHLH 805
            ++FLW+  ++ L T   L + H+  S  C RC    E A H+L  C      W L+   +
Sbjct: 186  RIFLWQVFHDRLKTKAELARRHIPVSTSCDRCGAVNEDAMHVLRDCALVKLFWLLILPAN 245

Query: 804  ETEPSFLHQRPQPLNPSITVNQLLQLKQSKDATTSFCFTLWTLWLARNDPIYGRKHKPPS 625
            + +  F  +  + L  ++ +  + +L    +    F   LW LW  RN   + +    P+
Sbjct: 246  KRQQFFNSRLQEWLRTNVGI--VGRLGSVSNWAIFFGIALWRLWFWRNQFFFNQASMDPN 303

Query: 624  ----DIVKLENHMHQEYNWANSVLPSPLRGMTATTQDTTSH-RMTRTIQDGWRPPETHWI 460
                D++     MH+       +   PL         TT H R+TR I   W+PP+  W 
Sbjct: 304  VVLMDVLTRTAEMHK-------IHTHPL---------TTGHIRVTRWI--SWKPPDWPWC 345

Query: 459  KINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXXXLRTVTLYQ 280
             +NTD A      S   G I RD     +      +G               L+      
Sbjct: 346  SLNTDGAHNRGGTSTAWGLI-RDHMGRWLSGFGMMIGSCSITVAELWGLYQGLQLAWNSG 404

Query: 279  WTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYREANQAADAL 100
              K+ +E DS  +   +T+ +    +   +I  I + L+      I H YREAN AAD +
Sbjct: 405  IRKLQVEIDSLCVLQLVTKPSLEINHYAPLIQAIKDYLKMDWQVSISHIYREANFAADYM 464

Query: 99   AN 94
            AN
Sbjct: 465  AN 466


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 12/307 (3%)
 Frame = -3

Query: 978  FLWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAPETAEHILLTCRFANETWDLLFHLHE- 802
            FLWKA N+GL T + L + H+     C  C+   ET  H+   C F   T D+  HL + 
Sbjct: 1064 FLWKACNDGLATTSRLERSHIFVPQNCCFCDCPSETICHLCFQCPF---TLDIYSHLEDK 1120

Query: 801  ----TEPSFLHQRPQPLNPSITVNQLLQLKQSKDATTSFCFTLWTLWLARNDPIYGRKHK 634
                  PS+       L+   +V +   +  + +  T      W +W  RN  I+  +  
Sbjct: 1121 FQWPAYPSWF--STLQLSSFRSVLEACHINLTLEYLTKLSIVWWHVWYFRNKLIFNNEST 1178

Query: 633  PPSDIVKLENHMHQEYNWANSVLPSPLRGMTATTQDTTSHRMTRTIQDG----WRPPETH 466
              S    + +    ++  AN  +PS     T   +D         ++ G    W PP   
Sbjct: 1179 SFSQASFIIHSFMGKWEKANLEIPS---FNTPLPKD-----CKLPVRSGKNLIWSPPNED 1230

Query: 465  WIKINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGI--XXXXXXXXXXXXXXLRTV 292
             +K+N D +   + G    GF+ R+S   V++A  + LG+                   +
Sbjct: 1231 VLKVNFDGSKLDN-GQAAYGFVIRNSNGEVLMARAKALGVYPSILMAEAMGLLEGIKGAI 1289

Query: 291  TLYQWT-KIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYREANQ 115
            +L  W+ KI  E D+  + + ++  A  PW + ++I +    L      +  H YREAN+
Sbjct: 1290 SLQNWSRKIIFEGDNIAVINAMSPSATGPWTIANIILDAGALLGHFQEVKFQHCYREANR 1349

Query: 114  AADALAN 94
             AD +A+
Sbjct: 1350 LADFMAH 1356


>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 601

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 83/317 (26%), Positives = 121/317 (38%), Gaps = 20/317 (6%)
 Frame = -3

Query: 978  FLWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAPETAEHILLTCRFANETWDLLFHLHET 799
            F+W A+   LPT  +L ++     D     +   +   HILLT  FAN  W      H +
Sbjct: 261  FIWGALTGKLPTNEILQRLGRDIVDCYCCYSKVKDDINHILLTGNFANYIWKK----HAS 316

Query: 798  EPSFLHQRPQPLNPSITVNQLL---QLKQSKDATTSFCFTL-----WTLWLARNDPIYGR 643
                LH     +N ++  +QLL    L+ + +       TL     W LW  R    YG 
Sbjct: 317  TVGALH-----VNTNMR-SQLLYWRSLQTNNEVHKLLIHTLPNIICWNLWENRCAVKYGG 370

Query: 642  KH-----------KPPSDIVKLE-NHMHQEYNWANSVLPSPLRGMTATTQDTTSHRMTRT 499
            K            K    I+KLE +++  +Y+W + +            Q      M R 
Sbjct: 371  KQSSIYRVQYGIFKDTMQIIKLEYSNIPWQYSWGHLI------NFIDQCQQQYKIFMVR- 423

Query: 498  IQDGWRPPETHWIKINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXX 319
                W  P     K+NTD +     G+I GG I RD   S+I A   P            
Sbjct: 424  ----WIKPTIGRYKLNTDGSCLQENGNIEGGGILRDHQGSIIFAFASPFAFGTNNIAKLK 479

Query: 318  XXXXXLRTVTLYQWTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQIL 139
                 L     + +  I +E DS+ L  +I+   + PW  +  +  I    + + H Q  
Sbjct: 480  AALYGLEWCEQHGYKDIVLEIDSELLSKWISNTIQIPWRCQQYVQHIHEITKKLHHFQCQ 539

Query: 138  HNYREANQAADALANHS 88
            H YRE N  AD LA  S
Sbjct: 540  HIYREENSTADLLAKWS 556


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 316

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 70/270 (25%), Positives = 112/270 (41%), Gaps = 7/270 (2%)
 Frame = -3

Query: 876 ETAEHILLTCRFANETWDLLFH---LHETEPSFLHQRPQPLNPSITVNQLLQLKQSKDAT 706
           ++ EH   + +FA   W        L E +PS L  R +    +   N   QL      T
Sbjct: 10  DSIEHTFNSGQFAGRVWSFFSASAGLKEEQPS-LQARLRQWWSATATNAGHQLLLQATPT 68

Query: 705 TSFCFTLWTLWLARNDPIYGRKHKPPSDIVKLENHMHQE-YNWANSVLPSPLRGMTATTQ 529
               F  W LW  R    YG K    ++I +++  ++++ +    +  P        T  
Sbjct: 69  ----FVCWNLWKNRCACKYGGK---ATNISRVKYAIYKDTFKMLQNTFPHIKWPSNWTAL 121

Query: 528 DTTSHRMTRTIQD---GWRPPETHWIKINTDDAARGHPGSIGGGFICRDSATSVIVAMDQ 358
             TS +    I+     W  P   WIKINTD +A  +PG IG G I RD+   +++A   
Sbjct: 122 YQTSEKCKHDIKVCKVAWNRPPEEWIKINTDGSAINNPGKIGAGGILRDTEGRLVLAFAT 181

Query: 357 PLGIXXXXXXXXXXXXXXLRTVTLYQWTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEI 178
            LG               L       +  I +E DSQ +  +IT++    W + + + +I
Sbjct: 182 SLGEGSNNQAEMEAAQFGLSWAIDLDYRNIILEVDSQIVVQWITKKTTHHWSVSNQLEKI 241

Query: 177 TNRLEAIPHHQILHNYREANQAADALANHS 88
              ++     +  H +REAN  AD+L+ HS
Sbjct: 242 QQLIQRAHKFKCEHIFREANWTADSLSKHS 271


>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 676

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 75/304 (24%), Positives = 115/304 (37%), Gaps = 5/304 (1%)
 Frame = -3

Query: 984  QLFLWKAINEGLPTFTLLHKIHLTTSDLCPRCNLAPETAEHILLTCRFANETWDLLFHLH 805
            ++FLW   N+ + T     + H+  SD+CP C  A E+  H+L  C      W  +  + 
Sbjct: 357  RIFLWLVGNQVVLTNAERVRRHMADSDVCPLCKGASESLIHVLRDCPAMMGIWMRVVPVM 416

Query: 804  ETEPSFLHQRPQPLNPSITVNQLLQLKQSKDAT-----TSFCFTLWTLWLARNDPIYGRK 640
            E    F          S+       LK+  D+      T F  T+W  W  R   ++G  
Sbjct: 417  EQRRFF--------ETSLLEWMYGNLKERSDSERRSWPTLFALTVWWGWKWRCGYVFGED 468

Query: 639  HKPPSDIVKLENHMHQEYNWANSVLPSPLRGMTATTQDTTSHRMTRTIQDGWRPPETHWI 460
             +   D VK       E   A+       R      +D    RM       WR P   W+
Sbjct: 469  SRC-RDRVKFLKSAVAEVEAAHLAANGDAR------EDVLVERMI-----AWRKPAEGWV 516

Query: 459  KINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXXXLRTVTLYQ 280
             +NTD A+ G+PG    G + RD   S +V     +G+              L       
Sbjct: 517  TMNTDGASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLAELWGVYYGLVVAWERG 576

Query: 279  WTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYREANQAADAL 100
            W ++ +E DS  +  F+         L  ++      +      +I H YREAN+ AD L
Sbjct: 577  WRRVRLEVDSALVVGFLQSGIGDSHPLAFLVRLCHGFISKDWIVRITHVYREANRLADGL 636

Query: 99   ANHS 88
            AN++
Sbjct: 637  ANYA 640


>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 78/277 (28%), Positives = 113/277 (40%), Gaps = 14/277 (5%)
 Frame = -3

Query: 876 ETAEHILLTCRFANETWDL------LFHLHETEPSFLHQRPQPLNPSITVNQLLQLKQSK 715
           ++ +HI  T +FA   W        L H   T  + L ++    NP    +QLL      
Sbjct: 2   DSIDHIFSTGKFAGTVWKSFAASAGLQHDQTTLQARL-EKWWTANPRNEGHQLLL----- 55

Query: 714 DATTSFCFTLWTLWLARNDPIYGRKHKPPS--------DIVKLENHMHQEYNWANSVLPS 559
            AT    F  W LW  R    YG K    S        D  K+  +     NW     P+
Sbjct: 56  QATP--IFICWNLWKNRCASKYGGKATYISRVKYAIYKDNFKMMKNAFPHINW-----PA 108

Query: 558 PLRGMTATTQDTTSHRMTRTIQDGWRPPETHWIKINTDDAARGHPGSIGGGFICRDSATS 379
               +  TT +   H + +  +  W  P   WIKINTD +A  +PG IG G I RD    
Sbjct: 109 HWTALI-TTSERCKHEI-KVCKVTWNRPPEEWIKINTDGSALTNPGKIGAGGIIRDKDGK 166

Query: 378 VIVAMDQPLGIXXXXXXXXXXXXXXLRTVTLYQWTKIYIETDSQTLFHFITQRAEPPWYL 199
           +I+A    LG               L       +  I +E DSQ + H+I +++   W +
Sbjct: 167 LILAFATSLGEGSNNKAETEAALFGLVKALELGFKNIIMELDSQLVVHWINKKSAHHWSV 226

Query: 198 RDMIAEITNRLEAIPHHQILHNYREANQAADALANHS 88
            + IA+I   +    + +  H  REAN  AD+L+ HS
Sbjct: 227 ANEIAKIQFLILQTQNFKCQHTLREANWVADSLSKHS 263


>ref|XP_004235425.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 179

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
 Frame = -3

Query: 486 WRPPETHWIKINTDDAARGHPGSIGGGFICRDSATSVIVAMDQPLGIXXXXXXXXXXXXX 307
           W  P   WIKINTD +A  +PG IG G I RD    +++A   PLG              
Sbjct: 4   WNKPLDQWIKINTDGSALKNPGRIGAGGILRDKEGQLVMAFSTPLGEGSNNTAEIEVALL 63

Query: 306 XLRTVTLYQWTKIYIETDSQTLFHFITQRAEPPWYLRDMIAEITNRLEAIPHHQILHNYR 127
            +       +    IE DSQ + H+I+++  P W + + + ++ + +    + +  HN+R
Sbjct: 64  GMNWSLELGYRN--IELDSQLVVHWISKKTAPHWSISNQLDKLQHLIMQAHNFKCCHNFR 121

Query: 126 EANQAADALANHSAD--------NNQQGVLQTKIWKH----TVPNFLKE 16
           E N AADAL+ HS          NN +   + K + H     +PNF ++
Sbjct: 122 EENWAADALSKHSHTTAVPQVYRNNNELPKEAKAYYHLDLMNLPNFRRK 170