BLASTX nr result
ID: Papaver27_contig00044877
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00044877
(440 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 191 1e-46
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 188 6e-46
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 187 1e-45
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 187 1e-45
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 187 1e-45
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 187 2e-45
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 187 2e-45
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 186 3e-45
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps... 184 1e-44
ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Caps... 179 4e-43
ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prun... 178 8e-43
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid... 176 3e-42
gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana] 176 3e-42
ref|XP_006645606.1| PREDICTED: probable RNA-dependent RNA polyme... 174 9e-42
ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutr... 174 1e-41
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 172 4e-41
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme... 172 4e-41
ref|XP_006645607.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 171 7e-41
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme... 171 7e-41
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 171 1e-40
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 191 bits (484), Expect = 1e-46
Identities = 89/146 (60%), Positives = 118/146 (80%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GG+P+E+FLD+L+N LEE+K+ ++RAA A+L YGEMDD +MIL GIPL EP+LK
Sbjct: 515 GGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILVGIPLDEPHLK 574
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
LS+L++ + LK GKLPV +SY LMGT DPTG L+ D+VCVILE+GQ+SG+VLVY++
Sbjct: 575 NYLSILLKTEKNDLKAGKLPVTESYYLMGTVDPTGALKEDEVCVILESGQISGEVLVYRN 634
Query: 78 PGLHFGDVHLLTATYVKELKNYVGDA 1
PGLHFGD+H+L ATYVK L+ YVG++
Sbjct: 635 PGLHFGDIHILKATYVKALEEYVGNS 660
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 188 bits (478), Expect = 6e-46
Identities = 89/146 (60%), Positives = 118/146 (80%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GGVP+E+FLDLL+N +EETK ++RAA +A+L +G+MDD +MIL GIPL EP+LK
Sbjct: 527 GGVPNEFFLDLLLNTMEETKTIFNNKRAALKAALNHGDMDDQNAAQMILVGIPLDEPHLK 586
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
+RLS+L + LK G+LPV +SY LMGT DPTG L+ D+VCVILE+GQ+SGDVLVY++
Sbjct: 587 DRLSILSNIEKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVILESGQISGDVLVYRN 646
Query: 78 PGLHFGDVHLLTATYVKELKNYVGDA 1
PG+HFGD+H+L ATYVK L+ YVG++
Sbjct: 647 PGVHFGDIHVLKATYVKALEEYVGNS 672
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 187 bits (476), Expect = 1e-45
Identities = 85/146 (58%), Positives = 118/146 (80%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GGVP+E+F+ +L N LE+ +++AA R +L YG+MDD ++ MI CGIPL EPYL+
Sbjct: 413 GGVPEEFFMGILNNALEDAHGILSNKKAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQ 472
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
LS+L +E+ K LK GK+PV +SY LMGTADPTG+L+ D+VC+IL+ GQVSG+VLVY++
Sbjct: 473 HHLSILKKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQVSGEVLVYRN 532
Query: 78 PGLHFGDVHLLTATYVKELKNYVGDA 1
PGLHFGD+H+L ATYV+EL+++VG+A
Sbjct: 533 PGLHFGDIHILKATYVRELEDFVGNA 558
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 187 bits (476), Expect = 1e-45
Identities = 84/146 (57%), Positives = 119/146 (81%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GGVP+E+F+ ++ N LE+ ++ AA R +L YG+MDD ++ MI CGIPL EPYL+
Sbjct: 413 GGVPEEFFMGIVNNALEDAHGILSNKNAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQ 472
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
RLS+LM+E+ K LK GK+PV +SY LMGTADPTG+L+ D+VC+IL+ GQ+SG+VL+Y++
Sbjct: 473 CRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGEVLIYRN 532
Query: 78 PGLHFGDVHLLTATYVKELKNYVGDA 1
PGLHFGD+H+L ATYV+EL+++VG+A
Sbjct: 533 PGLHFGDIHILKATYVRELEDFVGNA 558
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 187 bits (476), Expect = 1e-45
Identities = 84/146 (57%), Positives = 119/146 (81%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GGVP+E+F+ ++ N LE+ ++ AA R +L YG+MDD ++ MI CGIPL EPYL+
Sbjct: 435 GGVPEEFFMGIVNNALEDAHGILSNKNAALRVALNYGDMDDNIVATMIGCGIPLEEPYLQ 494
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
RLS+LM+E+ K LK GK+PV +SY LMGTADPTG+L+ D+VC+IL+ GQ+SG+VL+Y++
Sbjct: 495 CRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGEVLIYRN 554
Query: 78 PGLHFGDVHLLTATYVKELKNYVGDA 1
PGLHFGD+H+L ATYV+EL+++VG+A
Sbjct: 555 PGLHFGDIHILKATYVRELEDFVGNA 580
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 187 bits (474), Expect = 2e-45
Identities = 87/146 (59%), Positives = 116/146 (79%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GGVP+EYF++LL + LE+ + Q +RAA R SL +GEMDD ++T+MIL GIP+ EP+L
Sbjct: 466 GGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFLH 525
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
LS ++ E+ K L+ GKLPVND + LMGTADPTG L+ D+VC+IL++GQV G VLVYKH
Sbjct: 526 HCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYKH 585
Query: 78 PGLHFGDVHLLTATYVKELKNYVGDA 1
PGLHFGD+H+L ATYV+ L+ +VG+A
Sbjct: 586 PGLHFGDIHVLNATYVEALEEFVGNA 611
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 187 bits (474), Expect = 2e-45
Identities = 87/146 (59%), Positives = 116/146 (79%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GGVP+EYF++LL + LE+ + Q +RAA R SL +GEMDD ++T+MIL GIP+ EP+L
Sbjct: 480 GGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMILSGIPIDEPFLH 539
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
LS ++ E+ K L+ GKLPVND + LMGTADPTG L+ D+VC+IL++GQV G VLVYKH
Sbjct: 540 HCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVLVYKH 599
Query: 78 PGLHFGDVHLLTATYVKELKNYVGDA 1
PGLHFGD+H+L ATYV+ L+ +VG+A
Sbjct: 600 PGLHFGDIHVLNATYVEALEEFVGNA 625
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 186 bits (472), Expect = 3e-45
Identities = 86/146 (58%), Positives = 116/146 (79%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GG+P+E+FLD+L+N LEE+K+ ++ AA +L YGEMDD +MIL GIPL EP+LK
Sbjct: 519 GGIPNEFFLDILLNTLEESKSIFYNKHAALNVALNYGEMDDQNAAQMILVGIPLDEPHLK 578
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
LS+L++ + LK G+LPV +SY LMGT DPTG L+ D+VCVILE+GQ+SG+VLVY++
Sbjct: 579 NHLSILLKTEKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVILESGQISGEVLVYRN 638
Query: 78 PGLHFGDVHLLTATYVKELKNYVGDA 1
PGLHFGD+H+L ATYVK L+ YVG++
Sbjct: 639 PGLHFGDIHILKATYVKALEEYVGNS 664
>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
gi|482565615|gb|EOA29804.1| hypothetical protein
CARUB_v10012898mg [Capsella rubella]
Length = 982
Score = 184 bits (466), Expect = 1e-44
Identities = 88/146 (60%), Positives = 114/146 (78%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GG+PDE+FLD+L N LEE+K ++RAA A+L YGEMDD +MIL GIPL EP+LK
Sbjct: 522 GGIPDEFFLDILHNTLEESKAIFYNKRAALNAALSYGEMDDQNAAQMILAGIPLDEPHLK 581
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
LS ++ + LK G+LPV +SY LMGT DPTG L+ D+VCVILE+GQ+SG+VLVY++
Sbjct: 582 TCLSSFLKREKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVILESGQISGEVLVYRN 641
Query: 78 PGLHFGDVHLLTATYVKELKNYVGDA 1
PGLHFGD+H+L ATYVK L+ YVG++
Sbjct: 642 PGLHFGDIHVLKATYVKALEEYVGNS 667
>ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Capsella rubella]
gi|482565607|gb|EOA29796.1| hypothetical protein
CARUB_v10012890mg [Capsella rubella]
Length = 998
Score = 179 bits (454), Expect = 4e-43
Identities = 83/146 (56%), Positives = 116/146 (79%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GGVP+++FL++L LEE+K RAA +A++ YG+MDD +MIL IPL EP+LK
Sbjct: 532 GGVPNDFFLNILRKTLEESKTIFYSERAAIKAAINYGDMDDQNTAEMILVDIPLDEPHLK 591
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
+RLS+L++ + LKEG+LP+ +SY LMGT DPTG L+ ++VCVILE GQ+SG+VLVY++
Sbjct: 592 DRLSILLKTEKNALKEGRLPIGESYYLMGTVDPTGELKENEVCVILETGQISGNVLVYRN 651
Query: 78 PGLHFGDVHLLTATYVKELKNYVGDA 1
PGLHFGD+H+L ATYVK L++YVG++
Sbjct: 652 PGLHFGDIHVLKATYVKALEDYVGNS 677
>ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
gi|462399806|gb|EMJ05474.1| hypothetical protein
PRUPE_ppa001584mg [Prunus persica]
Length = 798
Score = 178 bits (451), Expect = 8e-43
Identities = 88/147 (59%), Positives = 114/147 (77%), Gaps = 1/147 (0%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDD-FLLTKMILCGIPLGEPYL 262
GGVP EYF +LL+ LE+T+ C RRAAF+ + +GE+DD + KMIL GIPL E YL
Sbjct: 333 GGVPKEYFRELLMKDLEDTRGVFCSRRAAFKVAYNHGEIDDDYNSVKMILSGIPLEESYL 392
Query: 261 KERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYK 82
+ RLS+L +E+ K L++GK+ SY LMGTADPTGIL+ D+VC+IL++GQ+SG VLVY+
Sbjct: 393 QYRLSILKKEENKSLQKGKICSPQSYMLMGTADPTGILERDEVCIILDSGQMSGQVLVYR 452
Query: 81 HPGLHFGDVHLLTATYVKELKNYVGDA 1
HPGLHFGD+HLL A YVKEL+ VG+A
Sbjct: 453 HPGLHFGDIHLLKARYVKELEYVVGNA 479
>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 3;
Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
polymerase 3 [Arabidopsis thaliana]
Length = 992
Score = 176 bits (446), Expect = 3e-42
Identities = 83/146 (56%), Positives = 114/146 (78%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GGVP+++FL++L N LEE+K RAAF+A++ YG DD MIL GIPL EPYLK
Sbjct: 528 GGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYG--DDQYTADMILVGIPLDEPYLK 585
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
+RLS L++ + LK G+ P+++SY +MGT DPTG L+ +++CVIL +GQ+SGDVLVY++
Sbjct: 586 DRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELKENEICVILHSGQISGDVLVYRN 645
Query: 78 PGLHFGDVHLLTATYVKELKNYVGDA 1
PGLHFGD+H+L ATYVK L++YVG+A
Sbjct: 646 PGLHFGDIHVLKATYVKALEDYVGNA 671
>gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]
Length = 966
Score = 176 bits (446), Expect = 3e-42
Identities = 83/146 (56%), Positives = 114/146 (78%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GGVP+++FL++L N LEE+K RAAF+A++ YG DD MIL GIPL EPYLK
Sbjct: 502 GGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYG--DDQYTADMILVGIPLDEPYLK 559
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
+RLS L++ + LK G+ P+++SY +MGT DPTG L+ +++CVIL +GQ+SGDVLVY++
Sbjct: 560 DRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELKENEICVILHSGQISGDVLVYRN 619
Query: 78 PGLHFGDVHLLTATYVKELKNYVGDA 1
PGLHFGD+H+L ATYVK L++YVG+A
Sbjct: 620 PGLHFGDIHVLKATYVKALEDYVGNA 645
>ref|XP_006645606.1| PREDICTED: probable RNA-dependent RNA polymerase 4-like [Oryza
brachyantha]
Length = 1004
Score = 174 bits (442), Expect = 9e-42
Identities = 79/144 (54%), Positives = 111/144 (77%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GGVP+E+F++LL N +E+ +N + D A + Y +M+D + +MIL GIPL E YL+
Sbjct: 528 GGVPEEFFMELLQNAIEDAENARFDYGDALNIAFSYADMEDSMSARMILAGIPLDELYLQ 587
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
RL+ + +++ K +KEGK+P+++ Y LMGTADPTGIL P++VCVIL+NGQ+SGDVLVYKH
Sbjct: 588 SRLTFMAKQERKGIKEGKIPIDNCYYLMGTADPTGILAPNEVCVILDNGQLSGDVLVYKH 647
Query: 78 PGLHFGDVHLLTATYVKELKNYVG 7
PGLHFGD+H+L ATY+ L+ VG
Sbjct: 648 PGLHFGDIHVLKATYIPGLEEVVG 671
>ref|XP_006408907.1| hypothetical protein EUTSA_v10001896mg [Eutrema salsugineum]
gi|557110063|gb|ESQ50360.1| hypothetical protein
EUTSA_v10001896mg [Eutrema salsugineum]
Length = 988
Score = 174 bits (440), Expect = 1e-41
Identities = 83/145 (57%), Positives = 111/145 (76%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GGVP+++FLD+L N LE +K ++R+A +A+L YG+MDD +MIL GIPL EP+LK
Sbjct: 509 GGVPNDFFLDILRNTLENSKTIFQNKRSALKAALNYGDMDDQNAAQMILVGIPLDEPHLK 568
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
+ LS+L+ + LK G+LPV +SY LMGT DPT L+ ++VCVILE+GQ+SGDVLVY +
Sbjct: 569 DHLSILLHTEKNDLKAGRLPVTESYYLMGTVDPTRKLKENEVCVILESGQISGDVLVYMN 628
Query: 78 PGLHFGDVHLLTATYVKELKNYVGD 4
PGLHFGD+H+L A YVK L+ YV D
Sbjct: 629 PGLHFGDIHVLKAKYVKALEEYVQD 653
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 911
Score = 172 bits (436), Expect = 4e-41
Identities = 86/147 (58%), Positives = 113/147 (76%), Gaps = 1/147 (0%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLT-KMILCGIPLGEPYL 262
GGV EYF++LL + LEETK +RAA + + Y EMDD LT +MI GIPL EP+L
Sbjct: 550 GGVQKEYFMELLGSALEETKQVYLRKRAALKVVINYREMDDDCLTARMISSGIPLNEPHL 609
Query: 261 KERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYK 82
+ RLS L + + KL+ GKLP++DS+ LMGTADPTG+L+ ++VCVIL+NGQ+SG VLVY+
Sbjct: 610 RARLSRLAKIERTKLRGGKLPISDSFYLMGTADPTGVLESNEVCVILDNGQISGRVLVYR 669
Query: 81 HPGLHFGDVHLLTATYVKELKNYVGDA 1
+PGLHFGDVH++ A YV+EL + VGDA
Sbjct: 670 NPGLHFGDVHVMKARYVEELADVVGDA 696
>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 1011
Score = 172 bits (436), Expect = 4e-41
Identities = 87/147 (59%), Positives = 113/147 (76%), Gaps = 1/147 (0%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLT-KMILCGIPLGEPYL 262
GGV EYF++LL + LEETK +RAA + ++ Y EMDD LT +MI GIPL EP+L
Sbjct: 548 GGVHKEYFMELLGSALEETKQVYLRKRAALKVAINYREMDDECLTARMISSGIPLNEPHL 607
Query: 261 KERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYK 82
RLS L + + KL+ GKLP++DS+ LMGTADPTG+L+ ++VCVIL+NGQVSG VLVY+
Sbjct: 608 HARLSRLAKIERTKLRGGKLPISDSFYLMGTADPTGVLESNEVCVILDNGQVSGRVLVYR 667
Query: 81 HPGLHFGDVHLLTATYVKELKNYVGDA 1
+PGLHFGDVH++ A YV+EL + VGDA
Sbjct: 668 NPGLHFGDVHVMKARYVEELADVVGDA 694
>ref|XP_006645607.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
3-like [Oryza brachyantha]
Length = 1109
Score = 171 bits (434), Expect = 7e-41
Identities = 81/145 (55%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GGVP+EYFL+LL N +E +N A + + Y +M+D + +MIL GIPL E YL+
Sbjct: 636 GGVPEEYFLELLENAIEGAENACYYYEDALKIAFSYADMEDSISARMILSGIPLEESYLQ 695
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
RL+ + R++ K +K+GK+P+++ Y LMGT DPTG L P++VCVILENGQ+ GDVLVYKH
Sbjct: 696 SRLAFMARQERKGIKQGKIPIDECYYLMGTTDPTGTLGPNEVCVILENGQLCGDVLVYKH 755
Query: 78 PGLHFGDVHLLTATYVKEL-KNYVG 7
PGLHFGD+H+L ATY+K+L K YVG
Sbjct: 756 PGLHFGDIHVLKATYIKDLEKKYVG 780
>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
max]
Length = 988
Score = 171 bits (434), Expect = 7e-41
Identities = 81/144 (56%), Positives = 110/144 (76%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMDDFLLTKMILCGIPLGEPYLK 259
GGVP+E+F+DLL + +E+ + ++R+A RAS+ GE D++ +MILCGIPL EP+LK
Sbjct: 523 GGVPNEFFMDLLRSNMEDANHVYSNKRSALRASINCGEKDEYNAAEMILCGIPLDEPFLK 582
Query: 258 ERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGDVLVYKH 79
LS RE+ KKL+ GKL + D + LMGT DPTG L+ +QVC+I EN Q+ GDVLVY++
Sbjct: 583 HHLSRFAREEKKKLRGGKLYMPDCFYLMGTVDPTGHLKKNQVCIIHENSQIVGDVLVYRN 642
Query: 78 PGLHFGDVHLLTATYVKELKNYVG 7
PGLHFGD+H + ATYVKEL++YVG
Sbjct: 643 PGLHFGDIHKMDATYVKELESYVG 666
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 171 bits (433), Expect = 1e-40
Identities = 84/146 (57%), Positives = 114/146 (78%), Gaps = 2/146 (1%)
Frame = -3
Query: 438 GGVPDEYFLDLLINCLEETKNFQCDRRAAFRASLYYGEMD-DFLLTKMILCGIPLGEPYL 262
GGVP+ +FLD+L N L++ + ++R A + S YG MD DF +MIL GI L EPYL
Sbjct: 547 GGVPEIFFLDILRNALDDARGVFSNKRNALKVSFNYGGMDYDFTSARMILSGISLDEPYL 606
Query: 261 KERLSVLMREDLKKLKEGKLPVNDSYSLMGTADPTGILQPDQVCVILENGQVSGD-VLVY 85
+ RLS+LM+E+ K L+ GKLPV +SY LMGT DPTGIL+ ++VC+IL++GQVS + VLVY
Sbjct: 607 QHRLSILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKSNEVCIILKDGQVSWEKVLVY 666
Query: 84 KHPGLHFGDVHLLTATYVKELKNYVG 7
++PGLHFGD+H+L ATYVKEL+++VG
Sbjct: 667 RNPGLHFGDIHVLKATYVKELEDFVG 692