BLASTX nr result
ID: Papaver27_contig00044767
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00044767
(1995 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta... 231 2e-80
ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein A... 231 1e-77
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 220 4e-77
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 227 9e-76
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 204 2e-73
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 215 2e-73
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 204 3e-69
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 197 5e-68
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 199 6e-68
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 207 1e-66
ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298... 197 8e-66
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 198 1e-65
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 184 4e-65
ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756... 204 4e-64
gb|ABA97040.1| retrotransposon protein, putative, unclassified [... 199 5e-64
gb|EEC84753.1| hypothetical protein OsI_31756 [Oryza sativa Indi... 190 2e-62
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 242 4e-61
ref|XP_004295829.1| PREDICTED: uncharacterized protein LOC101302... 176 7e-61
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 241 1e-60
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 241 1e-60
>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 773
Score = 231 bits (590), Expect(2) = 2e-80
Identities = 153/507 (30%), Positives = 238/507 (46%), Gaps = 22/507 (4%)
Frame = -2
Query: 1670 PSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHIK 1491
P+I+HL FA D ++F KA++ L+ +L + KAS QA+NF KS + + +
Sbjct: 129 PAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSAILFGKGLDFRTSE 188
Query: 1490 LVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVFT 1311
+S+ LG+ +YLG P FV R++T +F F+ ++ N L+ AG+ V
Sbjct: 189 QLSQLLGIYKTEGFGRYLGLPEFVGRNKTNAFSFIAQTMDQKMDNWYNKLLSPAGKEVLI 248
Query: 1310 KHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGGL 1131
K +++++ TY MSCF P +L + + R FWWS K + + +W + K GGL
Sbjct: 249 KSIVTAIPTYSMSCFLLPMRLIHQITSAMRWFWWSNTKVKHKIPWVAWSKLNDPKKMGGL 308
Query: 1130 GIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRIA 951
IR+ N ++K +WRI Q P L+ K KYFP + LL+ + SSY WK I
Sbjct: 309 AIRDLKDFNIALLAKQSWRILQQPFSLMARVFKAKYFPKERLLDAKATSQSSY-AWKSIL 367
Query: 950 KSINFLKKNIVYKINNGKSSRIWLSNLLPYS-SAPPLSINPDYRNFTFVSELIDEQHGTW 774
+ + + Y NG + ++W N LP + PP+ + VS+L+ E G W
Sbjct: 368 HGTKLISRGLKYIAGNGNNIQLWKDNWLPLNPPRPPVGTCDSIYSQLKVSDLLIE--GRW 425
Query: 773 NIALLNNLFCPEDVVKIRTIHLNL-HCEDNIKWARTKDGNFSIKSAYKV--------YTN 621
N LL L D+ IR I ++ D I W T DGN+S+KS Y + + +
Sbjct: 426 NEDLLCKLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYSVKSGYHLLRKLSQQQHAS 485
Query: 620 DFSSAEESAFS--KKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTSCPLCKND 447
S E SA + +W + PKIK F + LP + + D +C C
Sbjct: 486 LPSPNEVSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITDDTCQRCGEA 545
Query: 446 SETVLHLFFHCPVASHICFALSL-----EPLVSIDFPWPEDYFLRWS-----DIRIGPFP 297
SE V HL F C V+ I + + L+S F + + + D+ + PF
Sbjct: 546 SEDVNHLLFQCRVSKEIWEQAHIKLCPGDSLMSNSFNQNLESIQKLNQSARKDVSLFPF- 604
Query: 296 FPVGWPSIGTIVMWCIWKLRCEVMFQN 216
+ W IWK+R +++F N
Sbjct: 605 -----------IGWRIWKMRNDLIFNN 620
Score = 97.1 bits (240), Expect(2) = 2e-80
Identities = 44/102 (43%), Positives = 64/102 (62%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
AFD++EW FI + K++GFS+ WC I CI+T TYS+L+NG P P RGIRQGD +
Sbjct: 35 AFDKIEWGFIEAIMKQMGFSEKWCNWIMTCITTTTYSILINGQPVRRIIPKRGIRQGDPI 94
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKIRKDSPLYYTLIF 1648
SPY+++ E LS ++ + + GFK ++ P L+F
Sbjct: 95 SPYLYLLCTEGLSALIQASIKAKQLHGFKASRNGPAISHLLF 136
>ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Setaria
italica]
Length = 950
Score = 231 bits (588), Expect(2) = 1e-77
Identities = 136/449 (30%), Positives = 214/449 (47%), Gaps = 16/449 (3%)
Frame = -2
Query: 1673 APSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHI 1494
APSITHL FADD +L KA+ L +L + S Q IN DKS S N
Sbjct: 248 APSITHLLFADDALLLLKANQENANYLQYVLQVYEACSGQMINKDKSSVLFSKNTSQTSG 307
Query: 1493 KLVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVF 1314
TLGL +++YLG P+++ R RT++F +L D+ + R+ K+ L+ AG+
Sbjct: 308 DQFLSTLGLAQGVRTDRYLGLPVYMGRSRTQTFAYLKDRVWKRIHGWKEKLLSKAGKETL 367
Query: 1313 TKHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGG 1134
K V ++ +Y M+CF K ++ + + FWW++ + ++ SW + K GG
Sbjct: 368 IKAVAQAIPSYAMACFDITKSVSDEISTMICRFWWAQMEKENKVHWVSWEILSSRKDEGG 427
Query: 1133 LGIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRI 954
LG RN N ++K WRI Q PE L L +Y P+ +LL++ + + SY W+ I
Sbjct: 428 LGYRNLHLFNLAMLAKQAWRILQNPESLCARLLTAQYCPSGDLLQVSEGSGISY-TWRSI 486
Query: 953 AKSINFLKKNIVYKINNGKSSRIWLSNLLPYSSAPPLSINPDYRNFTFVSELIDEQHGTW 774
+ LK ++++I +G RIW +P + + V ELID GTW
Sbjct: 487 VRGFKALKNGLIWRIGDGSQVRIWDDPWIPTGISRQPRTPRGSVLLSKVEELIDPITGTW 546
Query: 773 NIALLNNLFCPEDVVKIRTIHLNLHCEDNIKWARTKDGNFSIKSAYKVYTND------FS 612
+ L+ +F EDV I +I + + +D I W + G FS++SAY + ++ +
Sbjct: 547 DSQLVREIFWEEDVPNILSIPVRIGRDDVIAWHHDRKGMFSVRSAYHMLVDEERRQRKYQ 606
Query: 611 SAEESAFS----------KKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTSCP 462
E S KK+W L C PK++ F+ + + LP+ + +DT CP
Sbjct: 607 QGESSVCCREGDHETQKWKKLWKLPCPPKVRHFIWRLAHNSLPLKQNIKRRGVFLDTRCP 666
Query: 461 LCKNDSETVLHLFFHCPVASHICFALSLE 375
+C E H F C + L +E
Sbjct: 667 VCMRFDEDGGHCFLKCKLIKRCWRILEME 695
Score = 88.6 bits (218), Expect(2) = 1e-77
Identities = 46/102 (45%), Positives = 62/102 (60%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR+EW ++ + K+GFS W +I CISTVTY V VNG + P+RG+RQGD L
Sbjct: 155 AYDRVEWNYLEKIMLKMGFSRRWVSLILCCISTVTYRVKVNGVLTEEIKPTRGLRQGDPL 214
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKIRKDSPLYYTLIF 1648
SPY+F+ E S ML AE +QG I ++P L+F
Sbjct: 215 SPYLFLLCAEGFSSMLNVAEEAGRLQGISICANAPSITHLLF 256
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 220 bits (560), Expect(2) = 4e-77
Identities = 131/433 (30%), Positives = 207/433 (47%), Gaps = 7/433 (1%)
Frame = -2
Query: 1667 SITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHIKL 1488
+I+HL FADD ++FS AS+A ++L I + +AKAS Q NF+KS F I +
Sbjct: 652 TISHLLFADDSLVFSTASVAECKHLKGIFDRYAKASGQIFNFEKSSMFFGGKIPEEQKAA 711
Query: 1487 VSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVFTK 1308
+ L +S EKYLG P + R +T F+ + + +++ N + + G+ + K
Sbjct: 712 IRNIFNLNVVSKYEKYLGLPSMIGRKKTSFFREVKLRVLSKINNWQHKMFSSGGKEILIK 771
Query: 1307 HVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGGLG 1128
V ++ Y MS F PK L + + FWW KK +R ++ W + +KS GGLG
Sbjct: 772 AVAQAVPAYAMSVFKLPKGLCEEIQSEIAKFWWGSKKDKRGIHWARWDKLSCAKSRGGLG 831
Query: 1127 IRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRIAK 948
R++ + N+ ++K WR+ Q+P L+ L+ +YF + + L+ ++ S+ IW+ I
Sbjct: 832 FRDFISFNQAMVAKQGWRLIQFPNSLVSKVLRARYFKSCSFLDAKPGSNPSF-IWRSILW 890
Query: 947 SINFLKKNIVYKINNGKSSRIWLSNLLPYSSAPPLSINPDYRNFTFVSELIDEQHGTWNI 768
++K ++I NG + ++ N +P P T V EL+D+++ WN+
Sbjct: 891 GRQVIQKGARWRIGNGSNILVYKDNWIPRPDTFKPISPPTLPIDTTVGELMDDEN-NWNV 949
Query: 767 ALLNNLFCPEDVVKIRTIHL-NLHCEDNIKWARTKDGNFSIKSAY------KVYTNDFSS 609
A LN F ED I I L D + W K G +S+KS Y K +S
Sbjct: 950 AKLNQHFMQEDTEAILKIPLPRSQKVDEMMWHYDKHGEYSVKSGYQIALKLKAPDEPSNS 1009
Query: 608 AEESAFSKKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTSCPLCKNDSETVLH 429
S K VWS+ K+K FM ++LP + K D C C + ETV H
Sbjct: 1010 GSNSKRWKAVWSMELPEKMKIFMWRAARNLLPTAENLWKRKCLKDPICQGCNREVETVRH 1069
Query: 428 LFFHCPVASHICF 390
C A I +
Sbjct: 1070 ALLDCKAARKIWY 1082
Score = 97.8 bits (242), Expect(2) = 4e-77
Identities = 46/100 (46%), Positives = 67/100 (67%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR+EW F+ KKLGFS W ++I CI++V++SV++NG+P F P RG+RQG L
Sbjct: 558 AYDRVEWTFLKQTMKKLGFSRKWLELIMGCITSVSFSVIINGTPKGFFHPERGLRQGCPL 617
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKIRKDSPLYYTL 1654
SPY+FI EV S +LL+AE+ I G + +D + + L
Sbjct: 618 SPYLFIICTEVFSSLLLQAETKKRISGLRFAEDVTISHLL 657
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 227 bits (578), Expect(2) = 9e-76
Identities = 154/513 (30%), Positives = 240/513 (46%), Gaps = 12/513 (2%)
Frame = -2
Query: 1691 LRLGKIAPSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSAN 1512
+++G I+HLFFADD +LF +A+ V N+M IL+ + AS Q +N +KS S N
Sbjct: 676 VKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAASGQKLNMEKSEMSYSRN 735
Query: 1511 IHHKHIKLVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNG 1332
+ I + L K + EKYLG P F+ + R FQ + D+ + +L K L+
Sbjct: 736 LEPDKINTLQMKLAFKTVEGHEKYLGLPTFIGSSKKRVFQAIQDRVWKKLKGWKGKYLSQ 795
Query: 1331 AGRTVFTKHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGR 1152
AGR V K V ++ TY M CF PK + + + R F+W +K+ R + +W +
Sbjct: 796 AGREVLIKAVAQAIPTYAMQCFVIPKSIIDGIEKMCRNFFWGQKEEERRVAWVAWEKLFL 855
Query: 1151 SKSSGGLGIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSY 972
K GGLGIRN+ NR ++K WRI P+ L+ +K KYFP N LE + + S+
Sbjct: 856 PKKEGGLGIRNFDVFNRALLAKQAWRILTKPDSLMARVIKGKYFPRSNFLEARVSPNMSF 915
Query: 971 WIWKRIAKSINFLKKNIVYKINNGKSSRI----WLSNLLPYSSAPPLSINPDYRNFTFVS 804
K I + ++K + I +G+ + I W+ +L YS A ++ D V
Sbjct: 916 -TCKSILSARAVIQKGMCRVIGDGRDTTIWGDPWVPSLERYSIAATEGVSED-DGPQKVC 973
Query: 803 ELIDEQHGTWNIALLNNLFCPEDVVKIRTIHLNLHCE-DNIKWARTKDGNFSIKSAY--- 636
ELI WN+ LLN LF P + I+ I + L + D W +K+G F+++SAY
Sbjct: 974 ELISNDR--WNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHE 1031
Query: 635 ----KVYTNDFSSAEESAFSKKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTS 468
+ S +K+W PK+K F + L V + M +ID +
Sbjct: 1032 LLEDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGA 1091
Query: 467 CPLCKNDSETVLHLFFHCPVASHICFALSLEPLVSIDFPWPEDYFLRWSDIRIGPFPFPV 288
CP C ET HL + C +S A + PL F W + +
Sbjct: 1092 CPRCGEKEETTEHLIWGCDESSR---AWYISPLRIHTGNIEAGSFRIWVESLLDTHK-DT 1147
Query: 287 GWPSIGTIVMWCIWKLRCEVMFQNVVVNLDKVI 189
W ++ ++ W IW R + +F+ + +V+
Sbjct: 1148 EWWALFWMICWNIWLGRNKWVFEKKKLAFQEVV 1180
Score = 86.3 bits (212), Expect(2) = 9e-76
Identities = 41/90 (45%), Positives = 59/90 (65%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR+EW F+ + KLGF + +++ C+++ +SVLVNG P F PSRG+RQGD L
Sbjct: 589 AYDRVEWCFLENMMLKLGFPTRYTKLVMNCVTSARFSVLVNGQPSRNFFPSRGLRQGDPL 648
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKI 1684
SP++F+ E LS +L AE +I G KI
Sbjct: 649 SPFLFVVCAEGLSTLLRDAEEKKVIHGVKI 678
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 204 bits (519), Expect(2) = 2e-73
Identities = 153/583 (26%), Positives = 264/583 (45%), Gaps = 32/583 (5%)
Frame = -2
Query: 1673 APSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHI 1494
APSI+HL+FADD +FS+A + + I + S Q IN++KS S N+
Sbjct: 431 APSISHLYFADDSFIFSRAEERDMLCMKDIFVTYETMSGQQINYEKSSVSFSRNVPLWKQ 490
Query: 1493 KLVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVF 1314
++ LG++ + + EKYLG P ++ + +F++L D+ R + L+G G+ V
Sbjct: 491 HDLAAVLGVQRVENHEKYLGLPTELSYSKDEAFRYLIDRVRKRTQGWRDKTLSGVGKEVL 550
Query: 1313 TKHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGG 1134
K V+ S+ TY MSCF P+ L ++ + FWW + R ++ +W + SK GG
Sbjct: 551 LKAVIQSIPTYVMSCFELPRHLCNEMHQLMARFWWGEFGDERKIHWIAWDKLCSSKKEGG 610
Query: 1133 LGIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRI 954
LG R+ N+ ++K WR+ P+ L+ LK KYFP +L++ + SY W+ +
Sbjct: 611 LGFRDMHVFNKALLAKQGWRMLCRPQSLLAQVLKMKYFPTSSLIQAEVGKRISY-SWRSL 669
Query: 953 AKSINFLKKNIVYKINNGKSSRIWLSNLLPYS-SAPPLSINPDYRNFTFVSELIDEQHGT 777
+ L++ + +++ NG++ +W LP + P S+ V ELI+E G
Sbjct: 670 MRGKELLQQGLRFQVGNGENIHLWDDPWLPLPYTFKPFSLPMHGSEGMRVCELIEEGTGG 729
Query: 776 WNIALLNNLFCPEDVVKIRTIHLNLH-CEDNIKWARTKDGNFSIKSAYKV---------- 630
WN LL LF P + I I L+L+ ED + W G +++KS Y V
Sbjct: 730 WNEWLLEELFTPMESEIILKIPLSLNGGEDRLVWHFDNKGCYNVKSGYFVGRLLDGLNRK 789
Query: 629 YTNDFSSAEESAFSKKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSI-DTSCPLCK 453
+ S + S K+W PK++ + LP + + + + D +C C
Sbjct: 790 ASGSDSDVQWSRLWCKLWRTQVPPKVRMHAWRLVKGTLPSRAALVKKQVQLPDVNCVFCS 849
Query: 452 NDSETVLHLFFHCPV------ASHICFALSLEPLVSIDFPWPEDYFLRWSDIRIGPFPFP 291
+ E LHLF +C + P +S++ W D S ++ F
Sbjct: 850 TNVEDSLHLFKNCEALQPFWQQGMVQIHPRTHPSISVEV-WFWDMVEMLSGEKLEGF--- 905
Query: 290 VGWPSIGTIVMWCIWKLRCEVMFQNVVVNLDKVILNTRRMINTYITLPAKHVFIMDIKT- 114
+ +W IW R ++++ N+ ++ + ++ Y KH + T
Sbjct: 906 -------LMALWVIWVERNNMVWRGQFYNITNMMDWSSSLLLEY-----KHCHQRSVGTR 953
Query: 113 ----------PTSEVRHILLLDGSF--KKFKMGVGMTLCDVTG 21
P+ +R + +DGSF ++ + GVG+ + D G
Sbjct: 954 KKNKSKWTCPPSGRLR--VNIDGSFAHEEGRGGVGVVIRDHKG 994
Score = 100 bits (250), Expect(2) = 2e-73
Identities = 50/102 (49%), Positives = 69/102 (67%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR+EW F+ V KLGF D + + I CI+TV+YS LVNG P P+RG+RQGD +
Sbjct: 338 AYDRVEWCFLEKVLGKLGFGDTFVRWIMHCITTVSYSFLVNGEPCGKLIPTRGLRQGDAI 397
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKIRKDSPLYYTLIF 1648
SPY+F+ EVLS+M+ +AE++ IQG K+ D+P L F
Sbjct: 398 SPYLFLLCAEVLSRMIKQAETNGEIQGVKVCTDAPSISHLYF 439
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
[Citrus sinensis]
Length = 968
Score = 215 bits (547), Expect(2) = 2e-73
Identities = 149/522 (28%), Positives = 236/522 (45%), Gaps = 10/522 (1%)
Frame = -2
Query: 1667 SITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHIKL 1488
SITHL FADD ++F++A+ NL Q+ + +A AS Q NF+KS F S N I
Sbjct: 289 SITHLLFADDSLVFTRATKEDCTNLKQLFDCYAAASGQIFNFEKSSMFFSENAKQGQITT 348
Query: 1487 VSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVFTK 1308
+ L+ +S EKYLG P V R +T F + + ++ N + + G+ + K
Sbjct: 349 IKDIFQLQVVSRHEKYLGLPSMVGRKKTSFFNEIKLRIINKISNWQANFFSSGGKEILIK 408
Query: 1307 HVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGGLG 1128
V ++ Y MS F P L FWW KK+ +R+ ++ W + ++K GGLG
Sbjct: 409 AVAQAVPAYAMSVFKLPLGLCEDMQKAIAGFWWGKKREKRSIHWSKWERLCQAKKRGGLG 468
Query: 1127 IRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRIAK 948
R+ + N+ ++K +WRI Q PE L+ +K+KYF + +E ++ SY IW+ I
Sbjct: 469 FRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQIGSNPSY-IWRSILW 527
Query: 947 SINFLKKNIVYKINNGKSSRIWLSNLLPYSSAPPLSINPDYRNFTFVSELIDEQHGTWNI 768
++K + ++I +GK +++ S LP P T VS LIDE W
Sbjct: 528 GREVIRKGLRWRIGDGKLVKVYQSGWLPRPETFKPISPPSLPLDTTVSVLIDEDQ-CWRD 586
Query: 767 ALLNNLFCPEDVVKIRTIHLNLHCE-DNIKWARTKDGNFSIKSAYKV-----YTNDFSSA 606
++ F ED +I I L D + W K GN+S+KS Y++ + N SS+
Sbjct: 587 DVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKFPNRPSSS 646
Query: 605 EESAFS-KKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTSCPLCKNDSETVLH 429
+E S +W L K+K FM +LP + + + C C++ ET+ H
Sbjct: 647 KEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFH 706
Query: 428 LFFHCPVASHICFALSLEPLV-SIDFPWPEDYFLRWSDIRIGPFPFPVGWPSIGTIVMWC 252
F C + I + E V ++ L +D R + V W
Sbjct: 707 SLFDCKASRKIWKLTTFEEEVKALKCKDVLSLLLALADRR------SKTEMELIVAVCWS 760
Query: 251 IWKLRCEVMFQNVVVNLDKVILNTRRMINTY--ITLPAKHVF 132
IW R +FQN + + ++ +Y I +P F
Sbjct: 761 IWHSRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQMPQLQAF 802
Score = 90.1 bits (222), Expect(2) = 2e-73
Identities = 41/89 (46%), Positives = 60/89 (67%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR+EW F+ +LGFS W +++ +CIST ++SVL+NG + P RG+RQG L
Sbjct: 195 AYDRVEWEFLRCTLVRLGFSHKWVELVMRCISTTSFSVLINGVAKGLIQPQRGLRQGCPL 254
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFK 1687
SPY+FI EV + +L +AES+ +I G K
Sbjct: 255 SPYLFIICAEVFTNLLHQAESNQLIHGLK 283
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 204 bits (520), Expect(2) = 3e-69
Identities = 132/499 (26%), Positives = 221/499 (44%), Gaps = 16/499 (3%)
Frame = -2
Query: 1667 SITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHIKL 1488
S+ HL FADD +L KA+ LMQ L+ + + S Q IN +KS N+ +
Sbjct: 674 SVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFGKNVDIQIKDW 733
Query: 1487 VSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVFTK 1308
+ G+ + KYLG P ++ + F F+ +K +RL L+ G+ V K
Sbjct: 734 IKSRSGISLEGGTGKYLGLPECLSGSKRDLFGFIKEKLQSRLTGWYAKTLSQGGKEVLLK 793
Query: 1307 HVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGGLG 1128
+ +L Y MSCF PK L K + FWW+ + +R ++ SW + K GG G
Sbjct: 794 SIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHWLSWQRLTLPKDQGGFG 853
Query: 1127 IRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRIAK 948
++ N+ ++K WR+ Q L + +YF N + L + + SY W+ I
Sbjct: 854 FKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATRGSRPSY-AWRSILF 912
Query: 947 SINFLKKNIVYKINNGKSSRIWLSNLL-PYSSAPPLS----INPDYRNFTFVSELIDEQH 783
L + + I NG+ + +W L S+ PL+ IN D + VS+LID
Sbjct: 913 GRELLMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPLNRRRFINVDLK----VSQLIDPTS 968
Query: 782 GTWNIALLNNLFCPEDVVKIRTIHLNLHCEDNIKWARTKDGNFSIKSAY---------KV 630
WN+ +L +LF +DV I ED+ W + +G +S+K+ Y ++
Sbjct: 969 RNWNLNMLRDLFPWKDVEIILKQRPLFFKEDSFCWLHSHNGLYSVKTGYEFLSKQVHHRL 1028
Query: 629 YTNDFSSAEESAFSKKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTSCPLCKN 450
Y ++ K+W+LH PKI+ F+ +PV + D C +C
Sbjct: 1029 YQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDT 1088
Query: 449 DSETVLHLFFHCPVASHICFALSLEPLVSIDFPWPEDYFLRWSDI--RIGPFPFPVGWPS 276
++ET+ H+ F CP+A + ++ L S + + S + P
Sbjct: 1089 ENETINHILFECPLARQV---WAITHLSSAGSEFSNSVYTNMSRLIDLTQQNDLPHHLRF 1145
Query: 275 IGTIVMWCIWKLRCEVMFQ 219
+ ++W +WK R ++F+
Sbjct: 1146 VSPWILWFLWKNRNALLFE 1164
Score = 87.0 bits (214), Expect(2) = 3e-69
Identities = 43/102 (42%), Positives = 61/102 (59%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR+EWPF+ + LGF++ W I C+++V+YSVL+NG P P+RGIRQGD L
Sbjct: 579 AYDRVEWPFLETMMTALGFNNKWISWIMNCVTSVSYSVLINGQPYGHIIPTRGIRQGDPL 638
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKIRKDSPLYYTLIF 1648
SP +F+ E L +L KAE I G + + L+F
Sbjct: 639 SPALFVLCTEALIHILNKAEQAGKITGIQFQDKKVSVNHLLF 680
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 197 bits (500), Expect(2) = 5e-68
Identities = 141/503 (28%), Positives = 225/503 (44%), Gaps = 13/503 (2%)
Frame = -2
Query: 1685 LGKIAPSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIH 1506
+G+ I L FADD M+F+KA+ A + QIL+ + S Q +N+ KS F S N+
Sbjct: 685 IGRTRTRIPFLTFADDTMIFAKATEASCHKIRQILDKYCLMSGQLVNYHKSAFQCSPNVR 744
Query: 1505 HKHIKLVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAG 1326
+ LG++ S YLG P+ +R +F + K +L K +L+ AG
Sbjct: 745 DIDKVNFASILGMQESSELGDYLGCPIINSRVTKETFAGVISKTVQQLPKWKANSLSQAG 804
Query: 1325 RTVFTKHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSK 1146
RTV + L+S A++ M F PKK+ + D R F+W+K ++A F W I + K
Sbjct: 805 RTVLIQSNLASKASFQMQSFTLPKKVLTTLDTTYRNFFWNKDPAAKSANFIGWNKICQPK 864
Query: 1145 SSGGLGIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWI 966
S GG+G R N K+ W+I +++ V + KY QNLL + K ++ W
Sbjct: 865 SVGGVGFRKAEVTNIALQMKLLWKIMVSKDNIWVKLVTQKYLKEQNLL-VCKIPSNASWQ 923
Query: 965 WKRIAKSINFLKKNIVYKINNGKSSRIWLSNLL---PYSSAPPLSINPDYRNFTFVSELI 795
WK + + NF K + + I +G+ W N + P +S ++ + V+E
Sbjct: 924 WKNLLRHRNFFSKGLRWLIGDGQDISFWTDNWIFQYPLNSKYVPTVGSENIK---VAECF 980
Query: 794 DEQHGTWNIALLNNLFCPEDVVKIRTIHL-NLHCEDNIKWARTKDGNFSIKSAYKVYTND 618
+ G W+I L L P V I ++ + + +D + W T G +S+KS +
Sbjct: 981 NGL-GGWDIPKLLTLVPPNIVKAISSVFIPSSSQQDRLLWGLTPTGQYSVKSGASLIREV 1039
Query: 617 FSSAEESAFSKKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTSCPLCKNDSET 438
E +W +H PKIK F+ L S + + +C C SET
Sbjct: 1040 NGGTIEKVEFNWIWGIHAPPKIKNFLWKACNDGLATTSRLERSHIFVPQNCCFCDCPSET 1099
Query: 437 VLHLFFHCPVASHICFALSLEPLVSIDFPWPEDYFLRWSDIRIGPFPFPVGWPSIG---- 270
+ HL F CP F L + + F WP Y +S +++ F + I
Sbjct: 1100 ICHLCFQCP------FTLDIYSHLEDKFQWPA-YPSWFSTLQLSSFRSVLEACHINLTLE 1152
Query: 269 -----TIVMWCIWKLRCEVMFQN 216
+IV W +W R +++F N
Sbjct: 1153 YLTKLSIVWWHVWYFRNKLIFNN 1175
Score = 90.5 bits (223), Expect(2) = 5e-68
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DRLEW +I K+GFS W + I CIS+ ++SVLVNG PG+ F PSRGIRQGD L
Sbjct: 595 AYDRLEWKYIYTTMDKMGFSPIWIEWIRSCISSASFSVLVNGIPGERFFPSRGIRQGDPL 654
Query: 1773 SPYIFIN*MEVLSQMLLKA 1717
SPY+FI E+L++ KA
Sbjct: 655 SPYLFILCAELLAREFSKA 673
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 199 bits (506), Expect(2) = 6e-68
Identities = 123/439 (28%), Positives = 208/439 (47%), Gaps = 13/439 (2%)
Frame = -2
Query: 1673 APSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHI 1494
AP ++HLFFADD +LF+KAS+ + I++ + +AS Q +N K+ S ++ +
Sbjct: 676 APVVSHLFFADDSILFTKASVQECSMVADIISKYERASGQQVNLSKTEVVFSRSVDRERR 735
Query: 1493 KLVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVF 1314
+ LG+K + EKYLG P + R + +F + ++ + +L K+ L+ G+ V
Sbjct: 736 SAIVNVLGVKEVDRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVL 795
Query: 1313 TKHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGG 1134
K V ++ TY MS F P L + ++ FWW R ++ SW + KS GG
Sbjct: 796 IKSVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWWGSSDTNRKMHWHSWDTLCYPKSMGG 855
Query: 1133 LGIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRI 954
LG R+ N+ ++K WR+ + L+ L+ +YF + LLE + + S+ W+ I
Sbjct: 856 LGFRDLHCFNQSLLAKQAWRLCTGDQTLLYRLLQARYFKSSELLEARRGYNPSF-TWRSI 914
Query: 953 AKSINFLKKNIVYKINNGKSSRIW-----LSNLLPYSSAPPLSINPDYRNFTFVSELIDE 789
S + L + + + + +G+ R+W L P N D + V +LID
Sbjct: 915 WGSKSLLLEGLKWCVGSGERIRVWEDAWILGEGAHMVPTPQADSNLDLK----VCDLIDV 970
Query: 788 QHGTWNIALLNNLFCPEDVVKIRTIHLNLHCEDNIK-WARTKDGNFSIKSAY------KV 630
G WNI + F E+ + +I L+ D+ + W +++G FS++S Y V
Sbjct: 971 ARGAWNIESVQQTFVEEEWELVLSIPLSRFLPDDHRYWWPSRNGIFSVRSCYWLGRLGPV 1030
Query: 629 YTNDFSSAE-ESAFSKKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTSCPLCK 453
T E E+ ++VW L PK+ F+ L V + S+D +C +C
Sbjct: 1031 RTWQLQHGERETELWRRVWQLQGPPKLSHFLWRACKGSLAVKGRLFSRHISVDATCSVCG 1090
Query: 452 NDSETVLHLFFHCPVASHI 396
+ E++ H F C A I
Sbjct: 1091 DPDESINHALFDCTFARAI 1109
Score = 87.8 bits (216), Expect(2) = 6e-68
Identities = 43/102 (42%), Positives = 64/102 (62%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR+EW F+ V KK+GF D W + CIS+V+++ VNG +PSRG+RQGD +
Sbjct: 583 AYDRVEWCFLERVMKKMGFCDGWIDRVMACISSVSFTFNVNGVVEGSLSPSRGLRQGDPI 642
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKIRKDSPLYYTLIF 1648
SPY+F+ + S +L KA S+ I G +I + +P+ L F
Sbjct: 643 SPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFF 684
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 207 bits (526), Expect(2) = 1e-66
Identities = 159/569 (27%), Positives = 256/569 (44%), Gaps = 18/569 (3%)
Frame = -2
Query: 1667 SITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHIKL 1488
+ITHL FADD ++FSKAS+A + L I + +AKAS Q NF+KS F S + I
Sbjct: 82 TITHLLFADDSLVFSKASVADCKYLKGIFDCYAKASGQIFNFEKSSMFFSGKASSEQISA 141
Query: 1487 VSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVFTK 1308
+ LK + EKYLG P + R++ F+ + K +++ + + G+ + K
Sbjct: 142 IKSIFQLKVVPKYEKYLGLPPMLGRNKMSFFKEVKLKVTSKISSWHHKLFSAGGKEILIK 201
Query: 1307 HVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGGLG 1128
V ++ Y MS F PK L FWW KK + ++ W + ++K GGLG
Sbjct: 202 AVAQAVPAYAMSVFKLPKGLCEDIQKEIARFWWGTKKDKHGIHWARWDSMSKAKRRGGLG 261
Query: 1127 IRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRIAK 948
R+ + N+ ++K WR+ +YP L+ +K +Y+ N ++ S+ IW+ I
Sbjct: 262 FRDLPSFNQALVAKQGWRLVRYPNSLMARVMKARYYKNSTFWNAKVGSNPSF-IWRSILW 320
Query: 947 SINFLKKNIVYKINNGKSSRIWLSNLLPYSSAPPLSINPDYRNFTFVSELIDEQHGTWNI 768
+KK + ++I +GK ++ +P + + T V++LID ++ W +
Sbjct: 321 GSQVIKKGVRWRIGDGKKVLVYKDKWIPRPATFQPISPKTLPHETVVADLIDSEN-KWRV 379
Query: 767 ALLNNLFCPEDVVKIRTIHL-NLHCEDNIKWARTKDGNFSIKSAYKVYTN-DFSSAEESA 594
L F ED+ I I L + ED + W K G +S+KS Y++ N +F + ES+
Sbjct: 380 DRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQLALNQNFPNEPESS 439
Query: 593 FS-----KKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTSCPLCKNDSETVLH 429
S K W L K+K FM ++LP + ++ + C CK ETV H
Sbjct: 440 NSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSH 499
Query: 428 LFFHCPVASHICFALSLEPL-VSIDFPWPEDYFLRWSDIRIGPFPFPVGWPSIGTIVMWC 252
+ C A I L PL V +D+F S I+ + + W
Sbjct: 500 VLIECKAARKI---WDLAPLIVQPSKDHNQDFF---SAIQEMWSRSSTAEAELMIVYCWV 553
Query: 251 IWKLRCEVMFQN-------VVVNLDKVILNTRRMINTYITLPAKHVFIMDIK-TPTSEVR 96
IW R + +F+ + D V+ +R+ AK I K P S+
Sbjct: 554 IWSARNKFIFEGKKSDSRFLAAKADSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPPSQNV 613
Query: 95 HILLLDG--SFKKFKMGVGMTLCDVTGRI 15
L +D S K K+G+G + D G+I
Sbjct: 614 LKLNVDAAVSTKXQKVGLGAIVRDAEGKI 642
Score = 75.9 bits (185), Expect(2) = 1e-66
Identities = 37/84 (44%), Positives = 52/84 (61%)
Frame = -1
Query: 1905 LGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCLSPYIFIN*MEVLSQML 1726
LGFS W +I CI+T +SVL+NG+P + P RG+RQG LSPY+FI E S +L
Sbjct: 4 LGFSAKWISLIMSCITTTCFSVLINGNPVGLIKPERGLRQGCPLSPYLFILCAEAFSNLL 63
Query: 1725 LKAESDNIIQGFKIRKDSPLYYTL 1654
+AE + I+G K +D + + L
Sbjct: 64 NQAEREQKIRGLKFAQDITITHLL 87
>ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
subsp. vesca]
Length = 1164
Score = 197 bits (500), Expect(2) = 8e-66
Identities = 129/445 (28%), Positives = 213/445 (47%), Gaps = 13/445 (2%)
Frame = -2
Query: 1673 APSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHI 1494
APSI HLFFADD +F +A + L IL + +A Q ++F KS S N+ +
Sbjct: 633 APSINHLFFADDSFIFLRAEVVEWYRLKHILQVYEEALGQQVHFQKSSISFSRNVAREAQ 692
Query: 1493 KLVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVF 1314
++ LG++ + +KYLG P ++ + SFQ++ DK ++ N K L+ A + V
Sbjct: 693 DRLASLLGVERVDKHDKYLGLPTELSYSKKESFQYIMDKTRDKMKNWKDKTLSAAKKEVM 752
Query: 1313 TKHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGG 1134
K V+ S+ TY MS K + ++ FWW R ++ +W + K+ GG
Sbjct: 753 IKAVVQSVPTYVMSVLEVLKHICNEMHRCMAEFWWGDSDRGRKIHWVAWDKMCAPKNEGG 812
Query: 1133 LGIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRI 954
LG RN N+ ++K WRI + L+ LK KYFP+ + L+ + +D+SY +W+ +
Sbjct: 813 LGFRNMELFNQALLAKKGWRIINSLDSLVTRTLKAKYFPSGHFLKAEMGSDASY-VWRSL 871
Query: 953 AKSINFLKKNIVYKINNGKSSRIWLSN--LLPYSSAPPLSINPDYRNFTFVSELIDEQHG 780
K + L+K I Y + NG+S +W L P + ++ + V++LID
Sbjct: 872 LKGRDLLRKGIRYHVGNGESISVWHDPWILRPCTFKTYSTVMEGLEDLK-VADLIDPDTR 930
Query: 779 TWNIALLNNLFCPEDVVKIRTIHLNLHCEDNIKWARTKDGNFSIKSAYKVYTNDFSSAEE 600
W + LN LF ED V++ ++ + +D + W K G ++++ Y S ++
Sbjct: 931 VWMVDWLNELFF-EDEVEVISLSFR-NPDDQLIWHYDKHGLYTVRRGYYTARCALVSQQQ 988
Query: 599 SAFS---------KKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTSCPLCKND 447
++ S K VW + PKIK F+ + S + D SC C+
Sbjct: 989 ASTSAPRNSCDKWKAVWKVKVQPKIKCFIWRLLKDSSSTRSALAHRIALEDQSCLFCRCA 1048
Query: 446 SETVLHLFFHCPVAS--HICFALSL 378
ET +H+F C V + +C L L
Sbjct: 1049 QETSMHVFKDCQVIACMWLCSPLGL 1073
Score = 83.2 bits (204), Expect(2) = 8e-66
Identities = 41/102 (40%), Positives = 60/102 (58%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR++W F+ V + +GF W + +CI TV+YS ++NG P P+RG+RQGD +
Sbjct: 540 AYDRVKWGFLEEVMRSMGFHGVWIGWVMRCIKTVSYSFILNGEPRGNHTPTRGLRQGDSI 599
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKIRKDSPLYYTLIF 1648
SPY+F+ + LS+ML AE I G I +P L F
Sbjct: 600 SPYLFLLCAKGLSRMLTYAEMRGGIHGVSIATGAPSINHLFF 641
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 198 bits (504), Expect(2) = 1e-65
Identities = 128/491 (26%), Positives = 225/491 (45%), Gaps = 6/491 (1%)
Frame = -2
Query: 1670 PSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHIK 1491
P I+HL FADD +LF++A+ ++ ILN + AS Q IN++KS S + + +
Sbjct: 681 PEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGVSCEKKE 740
Query: 1490 LVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVFT 1311
+ L ++ + +KYLG P R + F+ L D+ + +L K+ L+ AG+ V
Sbjct: 741 ELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLI 800
Query: 1310 KHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGGL 1131
K V+ +L TY M + P + + + FWW K R ++ SW + + K GG+
Sbjct: 801 KAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDERKMHWLSWEKMCKPKCMGGM 860
Query: 1130 GIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRIA 951
G ++ N + K WR+ E L+ + KY+P+ ++ SY W+ I
Sbjct: 861 GFKDLAVFNDALLGKQVWRLLHNKESLLSRVMSAKYYPHGDVRYARLGYSHSY-SWRSIW 919
Query: 950 KSINFLKKNIVYKINNGKSSRIWLSNLLPYSSAPPLSINPDYRNFTFVSELIDEQHGTWN 771
+ + + + +++++ +G IW + + + + V +L+D + WN
Sbjct: 920 GAKSLVLEGLIWRVGDGTKIDIWSAPWVGDEEGRFIK-SARVEGLEVVGDLMDVERKEWN 978
Query: 770 IALLNNLFCPEDVVKIRTIHLNLHC-EDNIKWARTKDGNFSIKSAYKV----YTNDFSSA 606
+ L+ F D I I L+ C +D + WA +KDG +S+K+AY + +DF
Sbjct: 979 VELIERHFNERDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTAYMLGKGGNLDDFHRV 1038
Query: 605 EESAFSKKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTSCPLCKNDSETVLHL 426
+WSL+ PK++ F+ LPV + + CP C + ET HL
Sbjct: 1039 WNI-----LWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHL 1093
Query: 425 FFHCPVASHICFAL-SLEPLVSIDFPWPEDYFLRWSDIRIGPFPFPVGWPSIGTIVMWCI 249
F+ CP++ + L S L I+ D +RWS + G ++W +
Sbjct: 1094 FYRCPMSLKLWEELGSYILLPGIEDEAMCDTLVRWSQM-------DAKVVQKGCYILWNV 1146
Query: 248 WKLRCEVMFQN 216
W R +F++
Sbjct: 1147 WVERNRRVFEH 1157
Score = 80.9 bits (198), Expect(2) = 1e-65
Identities = 38/102 (37%), Positives = 59/102 (57%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR+EW F+ + +GF W ++ C++TV+YS ++NG PSRG+RQGD L
Sbjct: 587 AYDRVEWGFLRKLLLTMGFDGRWVNLVMSCVATVSYSFIINGRVCGSVTPSRGLRQGDPL 646
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKIRKDSPLYYTLIF 1648
SP++FI + SQM+ + I G K ++ P L+F
Sbjct: 647 SPFLFILVADAFSQMVKQKVVSKEIHGAKASRNGPEISHLLF 688
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 184 bits (468), Expect(2) = 4e-65
Identities = 110/345 (31%), Positives = 171/345 (49%), Gaps = 2/345 (0%)
Frame = -2
Query: 1664 ITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHIKLV 1485
++HLFFADD + F +A++ L +L+ + AS Q IN +KS F S N + L+
Sbjct: 1285 VSHLFFADDSLFFLRATLQNCETLSDLLHTYCIASGQLINVEKSSIFFSPNTPPEIAHLL 1344
Query: 1484 SRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVFTKH 1305
S + + +S YLG P F +R + ++ F+ D ++ K+ L+ AG+ V K
Sbjct: 1345 SSIMQIPVVSDPGTYLGLPTFWHRSKKKALGFIKDSILRKVKGWKQATLSQAGKEVLIKA 1404
Query: 1304 VLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGGLGI 1125
V +++ Y M CF FP L + + I FWW R +++SW + R K GG+G
Sbjct: 1405 VATAIPAYPMGCFKFPSTLCKELNGILADFWWG-NVDTRGIHWKSWDFLARPKKDGGMGF 1463
Query: 1124 RNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRIAKS 945
RN N ++K WR+ Q P L L+ Y+P + LE K + S WIW +
Sbjct: 1464 RNLEDFNNSLLAKQAWRLHQNPFALWARVLEQLYYPRSSFLEAPKGPNPS-WIWNSLLIG 1522
Query: 944 INFLKKNIVYKINNGKSSRIWLSNLLPYSSAPPLSIN-PDYRNFTFVSELIDEQHGTWNI 768
NF+ K ++ I NG S I N +P S PP +++ P + + V ELI+ +W +
Sbjct: 1523 RNFIHKEALWNIGNGFSVNIVGDNWIP--SIPPSTVSLPLNEDNSRVCELINWDTKSWEL 1580
Query: 767 ALLNNLFCPEDVVKIRTIHL-NLHCEDNIKWARTKDGNFSIKSAY 636
P + I I + +L D + W TKDG +S+KS Y
Sbjct: 1581 DHFAETITPTQRLLISAIPITSLAAPDTLIWPYTKDGVYSVKSGY 1625
Score = 93.2 bits (230), Expect(2) = 4e-65
Identities = 40/85 (47%), Positives = 61/85 (71%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR+EW F+ V +K+GF D W ++ C++T + SVL+NG PG F PSRG+RQGD L
Sbjct: 1189 AYDRVEWNFLEAVLRKMGFVDSWIGLVMSCVTTSSLSVLINGKPGPSFLPSRGLRQGDPL 1248
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNII 1699
SP++F+ +VLS+M+ K D+++
Sbjct: 1249 SPFLFLFVNDVLSRMINKMCQDSLL 1273
>ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756955 [Setaria italica]
Length = 1203
Score = 204 bits (520), Expect(2) = 4e-64
Identities = 126/442 (28%), Positives = 201/442 (45%), Gaps = 10/442 (2%)
Frame = -2
Query: 1673 APSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHI 1494
AP+I+HL FADD ++ +A L ILN + +S Q I+ KS + SAN
Sbjct: 539 APTISHLLFADDSLILMQADKNNADCLASILNRYCASSGQKISEAKSSIYFSANTEADQK 598
Query: 1493 KLVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVF 1314
V + L + S ++KYLG P V DR+ F+ L D+ R+ K+ L+ G+ +
Sbjct: 599 TEVCQILNIMTESLNDKYLGLPALVGLDRSNCFRHLIDRVNTRINGWKEKTLSLGGKEIL 658
Query: 1313 TKHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGG 1134
K + ++ Y M F PK + +WW R +++ W + K GG
Sbjct: 659 IKSIAQAVPVYAMMVFQIPKSICKGITNAISQYWWGDDDEHRRMHWQEWWKMCLPKDKGG 718
Query: 1133 LGIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRI 954
+G R+ + N ++K WR+ PE L L+ +Y+PN LL+ SS+ W+ I
Sbjct: 719 MGFRDLQSFNLAMLAKQAWRLLCEPESLCARVLRARYYPNGKLLQARNKNGSSF-TWQSI 777
Query: 953 AKSINFLKKNIVYKINNGKSSRIWLSNLLPYSSAPPLSINPDYRNFTFVSELIDEQHGTW 774
+ K ++++ +G IW N +P S + + V ELI+ W
Sbjct: 778 LAGLECFKHGYIWRVGDGTQINIWEDNWIPGSHNLKIQTARGNNLVSTVDELINPITMQW 837
Query: 773 NIALLNNLFCPEDVVKIRTIHLNLHCEDNIKWARTKDGNFSIKSAYKV-YTNDF------ 615
++ LL +F P DV +IR I L ED + W + G FS++SAY + N +
Sbjct: 838 DVDLLKAIFWPTDVYRIRQIPTTLGREDVVAWHYNRSGRFSVRSAYHCQWDNKYGQRHHQ 897
Query: 614 ---SSAEESAFSKKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTSCPLCKNDS 444
S A + KK+W + KIK F ++P + + CP+C+N +
Sbjct: 898 VQASFASGNQLWKKLWRMKVPGKIKIFGWRALKGLVPCRAILANRHIGQLGGCPVCQNGA 957
Query: 443 ETVLHLFFHCPVASHICFALSL 378
E + HL F C A + AL +
Sbjct: 958 EDIKHLLFTCDRAREVWQALGV 979
Score = 69.7 bits (169), Expect(2) = 4e-64
Identities = 33/76 (43%), Positives = 50/76 (65%)
Frame = -1
Query: 1875 IFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCLSPYIFIN*MEVLSQMLLKAESDNIIQ 1696
+ C+++V YSV N + ++F+PSRG+RQGD LSPY+F+ E LS M+ KAE +
Sbjct: 472 VMACVTSVRYSVRFNSAESEIFSPSRGLRQGDPLSPYLFLMVAEGLSCMIRKAEERGDLI 531
Query: 1695 GFKIRKDSPLYYTLIF 1648
G K+ +D+P L+F
Sbjct: 532 GVKVCRDAPTISHLLF 547
>gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1913
Score = 199 bits (505), Expect(2) = 5e-64
Identities = 128/452 (28%), Positives = 220/452 (48%), Gaps = 13/452 (2%)
Frame = -2
Query: 1673 APSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHI 1494
A I+HL F DD +LF KA R + +LN +A + Q +N +K H +
Sbjct: 1248 ALGISHLLFVDDTLLFFKADCEQARLIKGVLNEYALGTGQLVNPNKCSILFDDTSHAETQ 1307
Query: 1493 KLVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVF 1314
+ L + + +KYLG P R FQ L +K + R+ + L+ G+ +
Sbjct: 1308 DAIKNLLQIVCHNFEDKYLGFPTPEGRLNKGKFQSLQEKMWKRIILWGENYLSSGGKEIM 1367
Query: 1313 TKHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGG 1134
K V+ ++ Y MS F P+ + + + R FWW K +R ++R+W + + K +GG
Sbjct: 1368 LKVVIQAIPVYVMSIFRLPESVCEDLNKLARNFWWGADKGKRKTHWRAWSCLTKPKHNGG 1427
Query: 1133 LGIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRI 954
L R++ N+ +++ WR+ P+ L +K KY+PN +L++ ++S W+ I
Sbjct: 1428 LAFRDFRLFNQALLARQAWRLLDKPDSLCARVMKAKYYPNGSLVDTAFGGNASPG-WRAI 1486
Query: 953 AKSINFLKKNIVYKINNGKSSRIWLSNLLPYS-SAPPLSINPDYRNFTFVSELIDEQHGT 777
+ LKK IV++I NG+S RIW +P S P++ + R +VS+L+ Q G+
Sbjct: 1487 EHGLALLKKGIVWRIGNGRSVRIWRDPWIPRDHSCRPITTKRNCR-VKWVSDLLG-QDGS 1544
Query: 776 WNIALLNNLFCP---EDVVKIRT-IHLNLHCEDNIKWARTKDGNFSIKSAYKVYTN---- 621
W++ ++ +F P ++++KIRT + L ED + W + G FS++SAYK+ +
Sbjct: 1545 WDVQKVSRVFLPIDADEILKIRTSVRLE---EDFLSWHPDRLGQFSVRSAYKLAISLDYA 1601
Query: 620 DFSSAEESAFSKKVWSL----HCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTSCPLCK 453
D SS+ +K+W L + K+K F + L C +C
Sbjct: 1602 DESSSSSGQNPQKIWDLIWKCNVPQKVKVFCWRAANNCLANQENKKKRNLERSEICCICG 1661
Query: 452 NDSETVLHLFFHCPVASHICFALSLEPLVSID 357
N++E V H CP A H+ A+ +S++
Sbjct: 1662 NETEDVSHALSRCPHAVHLWEAMKAAGSLSLN 1693
Score = 75.1 bits (183), Expect(2) = 5e-64
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR++W F+ KLGF+ W + I C+S+V YS+ NG+ D FAPSRG+RQGD L
Sbjct: 1155 AYDRVDWVFLEQTMCKLGFAPRWIKWIMTCLSSVRYSIKFNGTLLDTFAPSRGLRQGDPL 1214
Query: 1773 SPYIFI 1756
SP++F+
Sbjct: 1215 SPFLFL 1220
>gb|EEC84753.1| hypothetical protein OsI_31756 [Oryza sativa Indica Group]
Length = 1350
Score = 190 bits (483), Expect(2) = 2e-62
Identities = 122/443 (27%), Positives = 207/443 (46%), Gaps = 13/443 (2%)
Frame = -2
Query: 1673 APSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHI 1494
AP I+HL FADD +LF KA + ++LN++A A+ Q IN K +
Sbjct: 872 APGISHLLFADDTLLFLKAVPEQAEVIREVLNDYATATGQQINPSKCSIMFGDSSSELVQ 931
Query: 1493 KLVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVF 1314
+ + TL + +KYLG P R + FQ + ++ + RL + L+ G+ +
Sbjct: 932 EAIRDTLQIANNVFEDKYLGFPTPDGRLKKGKFQSIQERIWKRLIQWGENYLSSGGKEIL 991
Query: 1313 TKHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGG 1134
K ++ ++ Y M F P+ + + I R FWW +K R ++++W + + K+ GG
Sbjct: 992 IKALIQAIPVYVMGIFKLPESVCDELTRITRGFWWGGEKGARKTHWKAWDTLTKPKNCGG 1051
Query: 1133 LGIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRI 954
LG R++ N+ +++ WR+ P+ L + LK KYF N NL + ++S W+ I
Sbjct: 1052 LGFRDFRLFNQALLARQAWRLIDSPDSLCAMVLKAKYFLNGNLTDTSFGGNASPG-WRAI 1110
Query: 953 AKSINFLKKNIVYKINNGKSSRIWLSNLLPYS-SAPPLSINPDYRNFTFVSELIDEQHGT 777
+ LKK I+++I NG+S RIW +P S P++ +Y+ +V++L+ + G
Sbjct: 1111 EFGLELLKKGIIWRIGNGRSVRIWRDPWIPRDHSRRPITKKSNYKT-KWVTDLLTDA-GE 1168
Query: 776 WNIALLNNLFCPEDVVKIRTIHL-NLHCEDNIKWARTKDGNFSIKSAYKVYTNDFSSAEE 600
W++ + +F P D I I + + D + W + G FS++SAY + S A E
Sbjct: 1169 WDVNRVRQIFWPIDAEVILKIRVPSQDVSDFVAWHPDRLGRFSVRSAYSLAV---SLASE 1225
Query: 599 SAFS-----------KKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSIDTSCPLCK 453
+AFS +W + K+K F + L K C +C
Sbjct: 1226 NAFSASSAVDRSKAWNMLWKCNVPQKVKIFAWKVALDCLATMVNKKRRKLEATDVCAICG 1285
Query: 452 NDSETVLHLFFHCPVASHICFAL 384
+ E H CP A + A+
Sbjct: 1286 TEEEDSAHALCRCPHAKSLWMAM 1308
Score = 78.2 bits (191), Expect(2) = 2e-62
Identities = 41/102 (40%), Positives = 61/102 (59%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR++W F+ KLGF+ W + I +CI+TV YSV NG+ D FAPSRG+ QGD L
Sbjct: 779 AYDRVDWGFLEQAMYKLGFAHRWVRWIMECITTVRYSVKFNGTLLDSFAPSRGLCQGDPL 838
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKIRKDSPLYYTLIF 1648
SP++F+ + LS +L + ++ I +P L+F
Sbjct: 839 SPFLFLFLADGLSLLLDEKVQQGVLSPIHICHSAPGISHLLF 880
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 242 bits (618), Expect = 4e-61
Identities = 144/461 (31%), Positives = 236/461 (51%), Gaps = 17/461 (3%)
Frame = -2
Query: 1691 LRLGKIAPSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSAN 1512
+R+ + APS++HL FADD ++ +A+ + L IL + + S Q IN DKS S N
Sbjct: 923 IRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPN 982
Query: 1511 IHHKHIKLVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNG 1332
+ V L ++ +++E+YLG P+FV R RT+ F +L ++ + R+ K+ L+
Sbjct: 983 TSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSR 1042
Query: 1331 AGRTVFTKHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGR 1152
AG+ + K V ++ T+ M CF K L + + +WWS ++ ++ SW +
Sbjct: 1043 AGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTL 1102
Query: 1151 SKSSGGLGIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSY 972
K+ GGLG R+ + N ++K WR+ Q P+ L L+ KYFP + + ++ SY
Sbjct: 1103 PKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSY 1162
Query: 971 WIWKRIAKSINFLKKNIVYKINNGKSSRIWLSNLLP--YSSAPPLSINPDYRNF-TFVSE 801
W+ I K + L+ +++++ +G IW +P +S P + P N T V E
Sbjct: 1163 -TWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKP---MTPRGANLVTKVEE 1218
Query: 800 LIDEQHGTWNIALLNNLFCPEDVVKIRTIHLNLHCEDNIKWARTKDGNFSIKSAYKVY-- 627
LID GTW+ LL+ F EDV I++I +++ ED + W G F++KSAYKV
Sbjct: 1219 LIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQRE 1278
Query: 626 ------------TNDFSSAEESAFSKKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKN 483
+++ S ++ F KK+W L KIK F+ M + L + + +H
Sbjct: 1279 MERRASRNGCPGVSNWESGDDD-FWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGM 1337
Query: 482 SIDTSCPLCKNDSETVLHLFFHCPVASHICFALSLEPLVSI 360
+DT C +C +E HLFF C + AL+LE L S+
Sbjct: 1338 DVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELRSM 1378
Score = 96.7 bits (239), Expect = 4e-17
Identities = 45/102 (44%), Positives = 65/102 (63%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR+EW F+ + KLGF DW +I +C+STVTY + VNG + F+P RG+RQGD L
Sbjct: 836 AYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGRGLRQGDPL 895
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKIRKDSPLYYTLIF 1648
SPY+F+ E S +L K E + + G +I + +P L+F
Sbjct: 896 SPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLF 937
>ref|XP_004295829.1| PREDICTED: uncharacterized protein LOC101302635 [Fragaria vesca
subsp. vesca]
Length = 913
Score = 176 bits (447), Expect(2) = 7e-61
Identities = 128/446 (28%), Positives = 199/446 (44%), Gaps = 20/446 (4%)
Frame = -2
Query: 1673 APSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSANIHHKHI 1494
AP I+H+ FADD +LF +A I ++ Q L + A+ Q INF KS + +
Sbjct: 232 APIISHMLFADDSLLFGRAEIHEAIHVKQCLLLYESAAGQKINFQKSAIAFGPGLDDQTK 291
Query: 1493 KLVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNGAGRTVF 1314
+++ LG+ + EKYLG P R++ F+ + ++ L + L+ AG+ V
Sbjct: 292 LEITQMLGVPMVDCHEKYLGLPTIAGRNKKGMFKRINERLDFHLQGWQSKLLSKAGKFVL 351
Query: 1313 TKHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGRSKSSGG 1134
K V ++ TY MS F PK + KF + FWW KK +R ++ W + R+K GG
Sbjct: 352 VKAVAQAIPTYSMSVFKLPKGVCCKFQSKVAKFWWGKKGNKRGIHWCKWDLLCRNKKEGG 411
Query: 1133 LGIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSYWIWKRI 954
LG R+ N+ ++K WRI +P+ +I L KY N + S+ +W+ +
Sbjct: 412 LGFRDLEGFNQALLAKTVWRIVLHPDSIINRVLHAKYVRNGDWAAAGVRVKPSF-VWQGL 470
Query: 953 AKSINFLKKNIVYKINNGKSSRI----WLSNLLPYSSAPPLSINPDYRNFTFVSELIDEQ 786
+ L I ++I +G +I WL+ + P ++P+ R VS+L+ Q
Sbjct: 471 VWGKDLLCVGIRWRIGSGDLVKIWGDKWLATPWSFKVVTPCFMDPNAR----VSQLM-SQ 525
Query: 785 HGTWNIALLNNLFCPEDVVKIRTIHLNLHCEDN----IKWARTKDGNFSIKSAY------ 636
G W++ + F P DV KI T+ L C+ N W DG FS+KS Y
Sbjct: 526 PGMWDMNFIKQHFLPVDVEKILTVPL---CDGNGGNVAVWHFRDDGRFSVKSGYWFGMEM 582
Query: 635 KVYTNDFSSAEESAFSKK------VWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKNSID 474
K SS S +W L K+K F+ LP + K
Sbjct: 583 KRLEKGSSSGSGHVNSNSINIWSLIWDLLVPNKVKLFLWRTCHAFLPCVECLFKRKICSH 642
Query: 473 TSCPLCKNDSETVLHLFFHCPVASHI 396
+ C ETV+H + C VA +
Sbjct: 643 SGCGRHGEGEETVVHSLWCCRVAKKV 668
Score = 87.0 bits (214), Expect(2) = 7e-61
Identities = 41/102 (40%), Positives = 65/102 (63%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR+EW F+ V K GF + ++I +C+ +V++S+L NG + PSRG+RQGD L
Sbjct: 139 AYDRVEWVFLQGVLSKFGFDEKLVELIMRCVRSVSFSILWNGEAVGLIDPSRGLRQGDPL 198
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKIRKDSPLYYTLIF 1648
SPY+F E L+ +L KA+ + +I G K D+P+ ++F
Sbjct: 199 SPYLFQMVSEGLTGLLQKADQEGMIHGVKAAVDAPIISHMLF 240
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 241 bits (614), Expect = 1e-60
Identities = 145/461 (31%), Positives = 234/461 (50%), Gaps = 17/461 (3%)
Frame = -2
Query: 1691 LRLGKIAPSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSAN 1512
+R+ + APS++HL FADD ++ +A+ + L IL + + S Q IN DKS S N
Sbjct: 868 IRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPN 927
Query: 1511 IHHKHIKLVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNG 1332
V L ++ +++EKYLG P+FV R RT+ F +L ++ + R+ K+ L+
Sbjct: 928 TSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSR 987
Query: 1331 AGRTVFTKHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGR 1152
AG+ + K V + T+ M CF K L + + +WWS ++ ++ SW +
Sbjct: 988 AGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTL 1047
Query: 1151 SKSSGGLGIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSY 972
K+ GGLG R+ + N ++K WR+ Q P+ L L+ KYFP + + ++ SY
Sbjct: 1048 PKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSY 1107
Query: 971 WIWKRIAKSINFLKKNIVYKINNGKSSRIWLSNLLP--YSSAPPLSINPDYRNF-TFVSE 801
W+ I K + L+ +++++ +G IW +P +S P + P N T V E
Sbjct: 1108 -TWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKP---MTPRGANLVTKVEE 1163
Query: 800 LIDEQHGTWNIALLNNLFCPEDVVKIRTIHLNLHCEDNIKWARTKDGNFSIKSAYKVY-- 627
LID GTW+ LL+ F EDV I++I +++ ED + W G F++KSAYKV
Sbjct: 1164 LIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQRE 1223
Query: 626 ------------TNDFSSAEESAFSKKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKN 483
+++ S ++ F KK+W L KIK F+ M + L + + +H
Sbjct: 1224 MERRASRNGCPGVSNWESGDDD-FWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGM 1282
Query: 482 SIDTSCPLCKNDSETVLHLFFHCPVASHICFALSLEPLVSI 360
+DT C +C +E HLFF C + AL+LE L S+
Sbjct: 1283 DVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELRSM 1323
Score = 96.7 bits (239), Expect = 4e-17
Identities = 45/102 (44%), Positives = 65/102 (63%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR+EW F+ + KLGF DW +I +C+STVTY + VNG + F+P RG+RQGD L
Sbjct: 781 AYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPL 840
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKIRKDSPLYYTLIF 1648
SPY+F+ E S +L K E + + G +I + +P L+F
Sbjct: 841 SPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLF 882
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 241 bits (614), Expect = 1e-60
Identities = 145/461 (31%), Positives = 234/461 (50%), Gaps = 17/461 (3%)
Frame = -2
Query: 1691 LRLGKIAPSITHLFFADDCMLFSKASIAYVRNLMQILNNFAKASRQAINFDKSGFFTSAN 1512
+R+ + APS++HL FADD ++ +A+ + L IL + + S Q IN DKS S N
Sbjct: 864 IRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPN 923
Query: 1511 IHHKHIKLVSRTLGLKYLSSSEKYLGTPLFVNRDRTRSFQFLTDKFYARLGNMKKTNLNG 1332
V L ++ +++EKYLG P+FV R RT+ F +L ++ + R+ K+ L+
Sbjct: 924 TSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSR 983
Query: 1331 AGRTVFTKHVLSSLATYHMSCFPFPKKLTSKFDAIQRTFWWSKKKPRRAAYFRSWLDIGR 1152
AG+ + K V + T+ M CF K L + + +WWS ++ ++ SW +
Sbjct: 984 AGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTL 1043
Query: 1151 SKSSGGLGIRNYFALNRVFISKITWRITQYPEHLIVVFLKDKYFPNQNLLEIDKAADSSY 972
K+ GGLG R+ + N ++K WR+ Q P+ L L+ KYFP + + ++ SY
Sbjct: 1044 PKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSY 1103
Query: 971 WIWKRIAKSINFLKKNIVYKINNGKSSRIWLSNLLP--YSSAPPLSINPDYRNF-TFVSE 801
W+ I K + L+ +++++ +G IW +P +S P + P N T V E
Sbjct: 1104 -TWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKP---MTPRGANLVTKVEE 1159
Query: 800 LIDEQHGTWNIALLNNLFCPEDVVKIRTIHLNLHCEDNIKWARTKDGNFSIKSAYKVY-- 627
LID GTW+ LL+ F EDV I++I +++ ED + W G F++KSAYKV
Sbjct: 1160 LIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQRE 1219
Query: 626 ------------TNDFSSAEESAFSKKVWSLHCLPKIKFFM*NMFAHMLPVNSTMHVYKN 483
+++ S ++ F KK+W L KIK F+ M + L + + +H
Sbjct: 1220 MERRASRNGCPGVSNWESGDDD-FWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGM 1278
Query: 482 SIDTSCPLCKNDSETVLHLFFHCPVASHICFALSLEPLVSI 360
+DT C +C +E HLFF C + AL+LE L S+
Sbjct: 1279 DVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELRSM 1319
Score = 96.7 bits (239), Expect = 4e-17
Identities = 45/102 (44%), Positives = 65/102 (63%)
Frame = -1
Query: 1953 AFDRLEWPFIIVVFKKLGFSDDWCQIIFQCISTVTYSVLVNGSPGDVFAPSRGIRQGDCL 1774
A+DR+EW F+ + KLGF DW +I +C+STVTY + VNG + F+P RG+RQGD L
Sbjct: 777 AYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPL 836
Query: 1773 SPYIFIN*MEVLSQMLLKAESDNIIQGFKIRKDSPLYYTLIF 1648
SPY+F+ E S +L K E + + G +I + +P L+F
Sbjct: 837 SPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLF 878