BLASTX nr result
ID: Papaver27_contig00043353
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00043353
(438 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 64 2e-08
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 64 2e-08
emb|CAB75484.1| putative protein [Arabidopsis thaliana] 63 5e-08
gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers... 62 8e-08
ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prun... 62 1e-07
ref|XP_007226707.1| hypothetical protein PRUPE_ppa020120mg [Prun... 61 1e-07
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 60 2e-07
ref|XP_006648719.1| PREDICTED: putative ribonuclease H protein A... 60 3e-07
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam... 60 3e-07
ref|XP_007199601.1| hypothetical protein PRUPE_ppa023095mg, part... 59 9e-07
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 59 9e-07
ref|XP_004305739.1| PREDICTED: uncharacterized protein LOC101306... 58 1e-06
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam... 58 1e-06
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 58 1e-06
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 58 2e-06
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 58 2e-06
gb|AAP12989.1| putative reverse transcriptase [Oryza sativa Japo... 58 2e-06
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 58 2e-06
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 57 2e-06
ref|XP_003567228.1| PREDICTED: putative ribonuclease H protein A... 57 2e-06
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = -3
Query: 262 SNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNKKS-CRGN 86
S WS +S A + +M+K+V++A+ ++ + FKLP + + S FW K S RG
Sbjct: 933 STWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGI 992
Query: 85 HIITWRRTQKPKEEGGLGFRAMHIFNRA 2
+ W+R Q K+EGGLGFR + FN A
Sbjct: 993 PWVAWKRLQYSKKEGGLGFRDLAKFNDA 1020
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = -3
Query: 262 SNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNKKS-CRGN 86
S WS +S A + +M+K+V++A+ ++ + FKLP + + S FW K S RG
Sbjct: 1159 STWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGI 1218
Query: 85 HIITWRRTQKPKEEGGLGFRAMHIFNRA 2
+ W+R Q K+EGGLGFR + FN A
Sbjct: 1219 PWVAWKRLQYSKKEGGLGFRDLAKFNDA 1246
>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
Length = 851
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = -3
Query: 262 SNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNKKS-CRGN 86
++WS +S A + +++K+V++A+ ++ + FKLP + + S FW K S RG
Sbjct: 398 ASWSAKFLSPAGKEILLKSVALAMPVYAMSCFKLPQGIVSEIESLLMNFWWEKASNKRGI 457
Query: 85 HIITWRRTQKPKEEGGLGFRAMHIFNRA 2
+ W+R Q K+EGGLGFR + FN A
Sbjct: 458 PWVAWKRLQYSKKEGGLGFRDLAKFNDA 485
>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = -3
Query: 262 SNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNKKS-CRGN 86
S+W ++S+ + +M+K V++A+ + + FKLP T ++S FW + R
Sbjct: 625 SSWFSKSLSQGGKEIMLKAVAMAMPVFAMSCFKLPKTTCTNLASAMADFWWSANDHQRKI 684
Query: 85 HIITWRRTQKPKEEGGLGFRAMHIFNRA 2
H ++W + PKE GGLGFR + +FN+A
Sbjct: 685 HWLSWEKLCLPKEHGGLGFRDIGLFNQA 712
>ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
gi|462424248|gb|EMJ28511.1| hypothetical protein
PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 61.6 bits (148), Expect = 1e-07
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 WTTDSNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNKKSC 95
W W G +S A + ++IK V+ AI I+ + F LP + ++ FW N +
Sbjct: 418 WKKLQTWKGKLLSGAGKEILIKVVAQAIPIYTMSCFLLPKYVCEDLNKLVAQFWWNSSTE 477
Query: 94 RGN-HIITWRRTQKPKEEGGLGFRAMHIFNRA 2
H + W R PKEEGGLGFR +H FN A
Sbjct: 478 NKKIHWMAWDRLCAPKEEGGLGFRNLHAFNLA 509
>ref|XP_007226707.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
gi|462423643|gb|EMJ27906.1| hypothetical protein
PRUPE_ppa020120mg [Prunus persica]
Length = 1011
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 WTTDSNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNKKSC 95
W W G +S A + ++IK V+ AI I+ + F LP + ++ FW N +
Sbjct: 666 WKKLQTWKGKLLSGAGKEILIKVVAQAIPIYTMSYFLLPKYVCEDLNKLVAQFWWNSSTE 725
Query: 94 RGN-HIITWRRTQKPKEEGGLGFRAMHIFNRA 2
H + W R PKEEGGLGFR +H FN A
Sbjct: 726 NKKIHWMAWDRLCAPKEEGGLGFRNLHAFNLA 757
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/88 (28%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = -3
Query: 262 SNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNK-KSCRGN 86
+ W +S+ + V++K++++A+ ++ + FKLP +++++ FW N + R
Sbjct: 776 TGWYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKI 835
Query: 85 HIITWRRTQKPKEEGGLGFRAMHIFNRA 2
H ++W+R PK++GG GF+ + FN+A
Sbjct: 836 HWLSWQRLTLPKDQGGFGFKDLQCFNQA 863
>ref|XP_006648719.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Oryza
brachyantha]
Length = 359
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = -3
Query: 262 SNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*F-WRNKKSCRGN 86
+ W + +S A R +IK+V +A+L HH++ LP K + K F W+ ++ G
Sbjct: 80 AGWKPNFLSPAGRLSLIKSVLMALLPHHQSVLTLPRWATKEIERKCHGFLWKGQQDINGG 139
Query: 85 H-IITWRRTQKPKEEGGLGFRAMHIFNRA 2
H ++ W++ PKE GGLG R + +F +A
Sbjct: 140 HCLVAWKKVAVPKELGGLGMRNIDLFGKA 168
>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 WTTDSNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FW-RNKKS 98
WT + W +S A R V+IK+V+ AI + + F+LPD + S FW K+
Sbjct: 22 WTRLNGWKEKFLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCHEIESMVCNFWWXQKEE 81
Query: 97 CRGNHIITWRRTQKPKEEGGLGFRAMHIFNRA 2
R H +W++ K K +GG+GFR + FN A
Sbjct: 82 TRKIHWTSWKQLCKSKLQGGMGFRCLQXFNSA 113
>ref|XP_007199601.1| hypothetical protein PRUPE_ppa023095mg, partial [Prunus persica]
gi|462395001|gb|EMJ00800.1| hypothetical protein
PRUPE_ppa023095mg, partial [Prunus persica]
Length = 933
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = -3
Query: 256 WSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNK-KSCRGNHI 80
W+ +S+A R ++IK+V++A+ + FK P K + S FW + R H
Sbjct: 361 WNQHCLSQAGREILIKSVALAVPAYPMNIFKFPTTLCKEIDSVLAGFWWGQIGDNRKLHW 420
Query: 79 ITWRRTQKPKEEGGLGFRAMHIFNRA 2
I W +PK EGG+GFR +H FN A
Sbjct: 421 INWDTLGQPKHEGGMGFRNLHKFNLA 446
>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = -3
Query: 262 SNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNK-KSCRGN 86
S W +S + +++K V++A+ ++ + FKL T K ++S FW N + R
Sbjct: 553 SGWFARTLSLGGKEILLKAVAMAMQVYAMSCFKLTKTTCKNLTSAMSDFWWNALEHKRKT 612
Query: 85 HIITWRRTQKPKEEGGLGFRAMHIFNRA 2
H ++W + KE GGLGFR + FN+A
Sbjct: 613 HWVSWEKLCLAKESGGLGFRDIESFNQA 640
>ref|XP_004305739.1| PREDICTED: uncharacterized protein LOC101306660 [Fragaria vesca
subsp. vesca]
Length = 330
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = -3
Query: 262 SNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*F-WRNKKSCRGN 86
SNW G+++S A R ++ +V I++L H T + P ++++ + + F W SCR
Sbjct: 147 SNWKGNSLSMAGRVTLVNSVVISMLSHSFTIYAWPKTVLQQVRNWIRNFIWTGNVSCRAY 206
Query: 85 HIITWRRTQKPKEEGGLGFRAMHIFNRA 2
+ + W++ P +EGGLG R + N+A
Sbjct: 207 YPVAWKKCCAPLKEGGLGVRNIMALNQA 234
>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
sinensis]
Length = 255
Score = 58.2 bits (139), Expect = 1e-06
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 WTTDSNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*F-WRNKKS 98
W+ + W ++S A R V+IK+V+ AI + + F+LPD + S F W K+
Sbjct: 22 WSRLNGWKEKSLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCXEIESMVCNFWWGQKEE 81
Query: 97 CRGNHIITWRRTQKPKEEGGLGFRAMHIFNRA 2
R H +W++ K K GG+GFR + FN A
Sbjct: 82 TRKIHWTSWKQLCKSKLRGGMGFRCLQHFNSA 113
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = -3
Query: 256 WSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FW-RNKKSCRGNHI 80
W + +S + +++K V++A+ + + FK+P +++ S FW +NKK RG H
Sbjct: 779 WQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAEFWWKNKKEGRGLHW 838
Query: 79 ITWRRTQKPKEEGGLGFRAMHIFNRA 2
W +PK GGLGF+ + FN A
Sbjct: 839 KAWCHLSRPKAVGGLGFKEIEAFNIA 864
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = -3
Query: 262 SNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNKKS-CRGN 86
S+WS +S A + +M+K+V++++ ++ + FKLP + + + FW K + R
Sbjct: 1159 SSWSAKYLSPAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFWWEKNAKKREI 1218
Query: 85 HIITWRRTQKPKEEGGLGFRAMHIFNRA 2
I W+R Q K+EGGLGFR + FN A
Sbjct: 1219 PWIAWKRLQYSKKEGGLGFRDLAKFNDA 1246
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/85 (32%), Positives = 44/85 (51%)
Frame = -3
Query: 256 WSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNKKSCRGNHII 77
W + +S+A + V+IK V+ AI + FK P K ++ FW RG H
Sbjct: 1388 WKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKELNGILADFWWGNVDTRGIHWK 1447
Query: 76 TWRRTQKPKEEGGLGFRAMHIFNRA 2
+W +PK++GG+GFR + FN +
Sbjct: 1448 SWDFLARPKKDGGMGFRNLEDFNNS 1472
>gb|AAP12989.1| putative reverse transcriptase [Oryza sativa Japonica Group]
gi|108708744|gb|ABF96539.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
gi|125544271|gb|EAY90410.1| hypothetical protein
OsI_11988 [Oryza sativa Indica Group]
gi|125586616|gb|EAZ27280.1| hypothetical protein
OsJ_11216 [Oryza sativa Japonica Group]
Length = 818
Score = 57.8 bits (138), Expect = 2e-06
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = -3
Query: 259 NWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNKKSC-RGNH 83
+WS +MS AA+ V++K+V+ A + FKLP + + FW S R H
Sbjct: 263 DWSEKHMSAAAKEVLVKSVAQAFPTYTVGVFKLPQQFCDDYAQMVRNFWWGHSSDERKVH 322
Query: 82 IITWRRTQKPKEEGGLGFRAMHIFNRA 2
I+W + PK GGLGFR M+ FN+A
Sbjct: 323 WISWDKLTSPKSHGGLGFRDMNCFNQA 349
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = -3
Query: 262 SNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNKKS-CRGN 86
S+WS +S A + +M+K+V++++ ++ + FKLP + + + FW K + R
Sbjct: 1139 SSWSAKYLSPAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFWWEKNAKKREI 1198
Query: 85 HIITWRRTQKPKEEGGLGFRAMHIFNRA 2
I W+R Q K+EGGLGFR + FN A
Sbjct: 1199 PWIAWKRLQYSKKEGGLGFRDLAKFNDA 1226
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/91 (34%), Positives = 48/91 (52%)
Frame = -3
Query: 274 WTTDSNWSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRNKKSC 95
W W G +S+A + V+IK V+ AI + + F+LP T ++ FW K+
Sbjct: 1061 WNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVARFWWGKEGG 1120
Query: 94 RGNHIITWRRTQKPKEEGGLGFRAMHIFNRA 2
+G H W K++GGLGFR + +FN+A
Sbjct: 1121 KGIHWRRWSDLCFSKKDGGLGFRDLSLFNQA 1151
>ref|XP_003567228.1| PREDICTED: putative ribonuclease H protein At1g65750-like
[Brachypodium distachyon]
Length = 820
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = -3
Query: 256 WSGSNMSEAARSVMIKNVSIAILIHHETSFKLPDVTIKRMSSKQQ*FWRN-KKSCRGNHI 80
W S++S + VMIK+++ A+ + FKLP ++ +W + R H
Sbjct: 260 WGDSHLSTGGKEVMIKSLAQALPTYIMGVFKLPFSVCDDLTRMIHNYWWGIENGKRKTHW 319
Query: 79 ITWRRTQKPKEEGGLGFRAMHIFNRA 2
+ W R +PK +GG GFR MHIFN+A
Sbjct: 320 VAWHRMTQPKGKGGFGFRDMHIFNQA 345