BLASTX nr result

ID: Papaver27_contig00043326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00043326
         (357 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72260.1| hypothetical protein VITISV_035448 [Vitis vinifera]    44   3e-07
ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containi...    44   3e-07
emb|CBI31083.3| unnamed protein product [Vitis vinifera]               44   3e-07
dbj|BAK07775.1| predicted protein [Hordeum vulgare subsp. vulgare]     40   6e-06

>emb|CAN72260.1| hypothetical protein VITISV_035448 [Vitis vinifera]
          Length = 1032

 Score = 43.5 bits (101), Expect(2) = 3e-07
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = -1

Query: 249 GQAGQMKEL*DVIECVRSPPPKEVQTGGV 163
           GQAG MKEL DVI+C+RSPP K+ +TG +
Sbjct: 550 GQAGHMKELFDVIDCMRSPPRKKFKTGAL 578



 Score = 36.6 bits (83), Expect(2) = 3e-07
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -3

Query: 307 QQGSSYPNLAAYHCIAVTL 251
           QQ SSYP+L AYHCIAVTL
Sbjct: 531 QQMSSYPDLVAYHCIAVTL 549


>ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic-like [Vitis vinifera]
          Length = 846

 Score = 43.5 bits (101), Expect(2) = 3e-07
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = -1

Query: 249 GQAGQMKEL*DVIECVRSPPPKEVQTGGV 163
           GQAG MKEL DVI+C+RSPP K+ +TG +
Sbjct: 400 GQAGHMKELFDVIDCMRSPPRKKFKTGAL 428



 Score = 36.6 bits (83), Expect(2) = 3e-07
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -3

Query: 307 QQGSSYPNLAAYHCIAVTL 251
           QQ SSYP+L AYHCIAVTL
Sbjct: 381 QQMSSYPDLVAYHCIAVTL 399


>emb|CBI31083.3| unnamed protein product [Vitis vinifera]
          Length = 647

 Score = 43.5 bits (101), Expect(2) = 3e-07
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = -1

Query: 249 GQAGQMKEL*DVIECVRSPPPKEVQTGGV 163
           GQAG MKEL DVI+C+RSPP K+ +TG +
Sbjct: 124 GQAGHMKELFDVIDCMRSPPRKKFKTGAL 152



 Score = 36.6 bits (83), Expect(2) = 3e-07
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -3

Query: 307 QQGSSYPNLAAYHCIAVTL 251
           QQ SSYP+L AYHCIAVTL
Sbjct: 105 QQMSSYPDLVAYHCIAVTL 123


>dbj|BAK07775.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 969

 Score = 39.7 bits (91), Expect(2) = 6e-06
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = -1

Query: 249 GQAGQMKEL*DVIECVRSPPPKEVQTGGV 163
           GQAG +KEL DVI+C+RSPP K+   G V
Sbjct: 537 GQAGLVKELFDVIDCMRSPPKKKFMVGPV 565



 Score = 35.8 bits (81), Expect(2) = 6e-06
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = -3

Query: 307 QQGSSYPNLAAYHCIAVTL 251
           +Q SSYP++AAYHCIAVTL
Sbjct: 518 EQLSSYPDIAAYHCIAVTL 536


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