BLASTX nr result
ID: Papaver27_contig00043099
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00043099
(719 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006484704.1| PREDICTED: pentatricopeptide repeat-containi... 211 3e-52
ref|XP_006437400.1| hypothetical protein CICLE_v10030585mg [Citr... 211 3e-52
ref|XP_006583812.1| PREDICTED: pentatricopeptide repeat-containi... 204 2e-50
ref|XP_006583811.1| PREDICTED: pentatricopeptide repeat-containi... 204 2e-50
ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ... 201 2e-49
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ... 201 2e-49
gb|EXB68732.1| hypothetical protein L484_024754 [Morus notabilis] 199 8e-49
ref|XP_007029760.1| Pentatricopeptide repeat-containing protein,... 197 4e-48
ref|XP_004505033.1| PREDICTED: pentatricopeptide repeat-containi... 195 1e-47
ref|XP_002325452.2| hypothetical protein POPTR_0019s06000g [Popu... 192 1e-46
ref|XP_007159307.1| hypothetical protein PHAVU_002G227100g [Phas... 180 4e-43
ref|XP_006344657.1| PREDICTED: pentatricopeptide repeat-containi... 169 7e-40
ref|XP_004231279.1| PREDICTED: pentatricopeptide repeat-containi... 168 1e-39
ref|XP_006399994.1| hypothetical protein EUTSA_v10012597mg [Eutr... 153 5e-35
ref|XP_006289420.1| hypothetical protein CARUB_v10002919mg [Caps... 153 5e-35
ref|XP_007029758.1| Pentatricopeptide repeat-containing protein,... 152 1e-34
ref|XP_004303063.1| PREDICTED: pentatricopeptide repeat-containi... 151 2e-34
sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-c... 150 4e-34
ref|NP_196981.1| pentatricopeptide repeat-containing protein [Ar... 150 4e-34
ref|XP_002873691.1| pentatricopeptide repeat-containing protein ... 148 2e-33
>ref|XP_006484704.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Citrus sinensis]
Length = 1039
Score = 211 bits (536), Expect = 3e-52
Identities = 109/229 (47%), Positives = 148/229 (64%), Gaps = 2/229 (0%)
Frame = +3
Query: 33 MKSLNQIKKLKLFTQFYS-ILTSKQLHSQHHLNPTLKIISPILPNVPICRNKDSHDKNQL 209
+K LN+ +K + F S LT ++ H+ + L I S + N P N
Sbjct: 2 IKHLNKQRKALFPSYFLSKSLTFSSTNNPHNPHSKLAINSSLKNNPP--------HPNNC 53
Query: 210 KQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKY 389
+ I P K+HLY +CTLI+LYL C RF++AS+TF MR+ + P L WN+L+Y +
Sbjct: 54 RNATAISPAKSHLYAYFFCTLIQLYLTCGRFAKASDTFFTMRNFNIIPVLSLWNKLIYHF 113
Query: 390 NASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEI-VDTVS 566
NASGL+SQVW+VY+ MI G V+PNV+T N+L+HS CKVG L AL F+R VEI VD V+
Sbjct: 114 NASGLVSQVWIVYTHMISCG-VLPNVFTINVLVHSFCKVGNLSFALDFLRNVEIDVDNVT 172
Query: 567 YNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
YNT+IWGFC+QG+ Q LS M+K GI +D F+CN ++ GFCRIG+V
Sbjct: 173 YNTVIWGFCEQGLANQGFGLLSIMVKNGISVDSFSCNTLVKGFCRIGMV 221
Score = 62.8 bits (151), Expect = 1e-07
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
Frame = +3
Query: 252 VSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYS 431
V Y +++ C R +EA F M G+ PN S+ L+ +G + + + S
Sbjct: 366 VVTYSSIMGGLCKCGRLAEAKMLFREMEKMGVDPNHVSYTTLIDSLFKAGCAMEAFALQS 425
Query: 432 EMILSGEVIPNVYTNNILIHSLCKVG---ELKTALGFIRTVEIVDT-VSYNTIIWGFCKQ 599
+M++ G V +V L+ L K G E + I +V V+Y+++I G CK
Sbjct: 426 QMMVRG-VAFDVVVYTTLMDGLFKAGRPSEAEDTFNLILKHNLVSNHVTYSSLIDGCCKL 484
Query: 600 GMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLVDD 719
G + A L EM +K + ++ T ++I+NG+ + G++D+
Sbjct: 485 GDMSAAESILQEMEEKHVVPNVITYSSIINGYVKKGMLDE 524
Score = 58.9 bits (141), Expect = 2e-06
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 9/222 (4%)
Frame = +3
Query: 33 MKSLNQIKKLKLFTQFYSILTSKQLHSQHHLNPTLKIISPILPNVPICRNKDSHDKNQLK 212
M++ N I L L+ + + L SQ + T I +LPNV N H ++
Sbjct: 94 MRNFNIIPVLSLWNKLIYHFNASGLVSQVWIVYTHMISCGVLPNV-FTINVLVHSFCKVG 152
Query: 213 QLKVIPPLKTHLYVSL----YCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLL 380
L ++ + + Y T+I + ++ +M NG+ + S N L+
Sbjct: 153 NLSFALDFLRNVEIDVDNVTYNTVIWGFCEQGLANQGFGLLSIMVKNGISVDSFSCNTLV 212
Query: 381 YKYNASGLISQ-VWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTAL----GFIRTV 545
+ G++ WV+ + +++G V +V NILI CK G+L +AL G R
Sbjct: 213 KGFCRIGMVKYGEWVM--DNLVNGGVCRDVIGFNILIDGYCKSGDLSSALKLMEGMRREG 270
Query: 546 EIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFT 671
I D VSYNT+I GFCK+G +A + E++ + D T
Sbjct: 271 VIPDIVSYNTLISGFCKRGDFVKAKSLIDEVLGSQKERDADT 312
Score = 58.2 bits (139), Expect = 3e-06
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Frame = +3
Query: 261 YCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMI 440
Y LI+ Y ++A T+ M + G+ PN ++N LL + +G +V ++ EM
Sbjct: 823 YNALIRGYWVSSHINKALATYTQMINEGVSPNTATYNILLGIFLGTGSTKEVDDLFGEMK 882
Query: 441 LSGEVIPNVYTNNILIHSLCKVGELKTALGF----IRTVEIVDTVSYNTIIWGFCKQGMV 608
G + P+ T + LI K+G K ++ I + T +YN +I F K+G +
Sbjct: 883 KRG-LKPDASTYDTLISGHAKIGNKKESIQIYCEMITKGYVPKTSTYNVLIGDFAKEGKM 941
Query: 609 EQAVVFLSEMIKKGIQMDIFTCNNILNGFCRI 704
QA L EM +G + T + ++ G+C +
Sbjct: 942 HQARELLKEMQARGRNPNSSTYDILIGGWCEL 973
>ref|XP_006437400.1| hypothetical protein CICLE_v10030585mg [Citrus clementina]
gi|557539596|gb|ESR50640.1| hypothetical protein
CICLE_v10030585mg [Citrus clementina]
Length = 1039
Score = 211 bits (536), Expect = 3e-52
Identities = 109/229 (47%), Positives = 148/229 (64%), Gaps = 2/229 (0%)
Frame = +3
Query: 33 MKSLNQIKKLKLFTQFYS-ILTSKQLHSQHHLNPTLKIISPILPNVPICRNKDSHDKNQL 209
+K LN+ +K + F S LT ++ H+ + L I S + N P N
Sbjct: 2 IKHLNKQRKALFPSYFLSKSLTFSSTNNPHNPHSKLAINSSLKNNPP--------HPNNC 53
Query: 210 KQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKY 389
+ I P K+HLY +CTLI+LYL C RF++AS+TF MR+ + P L WN+L+Y +
Sbjct: 54 RNATAISPAKSHLYAYFFCTLIQLYLTCGRFAKASDTFFTMRNFNIIPVLSLWNKLIYHF 113
Query: 390 NASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEI-VDTVS 566
NASGL+SQVW+VY+ MI G V+PNV+T N+L+HS CKVG L AL F+R VEI VD V+
Sbjct: 114 NASGLVSQVWIVYTHMISCG-VLPNVFTINVLVHSFCKVGNLSFALDFLRNVEIDVDNVT 172
Query: 567 YNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
YNT+IWGFC+QG+ Q LS M+K GI +D F+CN ++ GFCRIG+V
Sbjct: 173 YNTVIWGFCEQGLANQGFGLLSIMVKNGISVDSFSCNTLVKGFCRIGMV 221
Score = 62.8 bits (151), Expect = 1e-07
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
Frame = +3
Query: 252 VSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYS 431
V Y +++ C R +EA F M G+ PN S+ L+ +G + + + S
Sbjct: 366 VVTYSSIMGGLCKCGRLAEAKMLFREMEKMGVDPNHVSYTTLIDSLFKAGCAMEAFALQS 425
Query: 432 EMILSGEVIPNVYTNNILIHSLCKVG---ELKTALGFIRTVEIVDT-VSYNTIIWGFCKQ 599
+M++ G V +V L+ L K G E + I +V V+Y+++I G CK
Sbjct: 426 QMMVRG-VAFDVVVYTTLMDGLFKAGRPSEAEDTFNLILKHNLVSNHVTYSSLIDGCCKL 484
Query: 600 GMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLVDD 719
G + A L EM +K + ++ T ++I+NG+ + G++D+
Sbjct: 485 GDMSAAESILQEMEEKHVVPNVITYSSIINGYVKKGMLDE 524
Score = 58.9 bits (141), Expect = 2e-06
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 9/222 (4%)
Frame = +3
Query: 33 MKSLNQIKKLKLFTQFYSILTSKQLHSQHHLNPTLKIISPILPNVPICRNKDSHDKNQLK 212
M++ N I L L+ + + L SQ + T I +LPNV N H ++
Sbjct: 94 MRNFNIIPVLSLWNKLIYHFNASGLVSQVWIVYTHMISCGVLPNV-FTINVLVHSFCKVG 152
Query: 213 QLKVIPPLKTHLYVSL----YCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLL 380
L ++ + + Y T+I + ++ +M NG+ + S N L+
Sbjct: 153 NLSFALDFLRNVEIDVDNVTYNTVIWGFCEQGLANQGFGLLSIMVKNGISVDSFSCNTLV 212
Query: 381 YKYNASGLISQ-VWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTAL----GFIRTV 545
+ G++ WV+ + +++G V +V NILI CK G+L +AL G R
Sbjct: 213 KGFCRIGMVKYGEWVM--DNLVNGGVCRDVIGFNILIDGYCKSGDLSSALKLMEGMRREG 270
Query: 546 EIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFT 671
I D VSYNT+I GFCK+G +A + E++ + D T
Sbjct: 271 VIPDIVSYNTLISGFCKRGDFVKAKSLIDEVLGSQKERDADT 312
Score = 58.5 bits (140), Expect = 2e-06
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Frame = +3
Query: 261 YCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMI 440
Y LI+ Y ++A T+ M + G+ PN ++N LL + +G +V ++ EM
Sbjct: 823 YNALIRGYWVSSHINKALATYTQMINEGVSPNTATYNILLGIFLGTGSTKEVDDLFGEMK 882
Query: 441 LSGEVIPNVYTNNILIHSLCKVGELKTALGF----IRTVEIVDTVSYNTIIWGFCKQGMV 608
G + P+ T + LI K+G K ++ I + T +YN +I F K+G +
Sbjct: 883 KRG-LKPDASTYDTLISGHAKIGNKKESIQIYCEMITKGYVPKTSTYNVLIGDFAKEGKM 941
Query: 609 EQAVVFLSEMIKKGIQMDIFTCNNILNGFCRI 704
QA L EM +G + T + +++G+C +
Sbjct: 942 HQARELLKEMQARGRNPNSSTYDILISGWCEL 973
>ref|XP_006583812.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like isoform X2 [Glycine max]
Length = 867
Score = 204 bits (520), Expect = 2e-50
Identities = 108/228 (47%), Positives = 148/228 (64%)
Frame = +3
Query: 30 RMKSLNQIKKLKLFTQFYSILTSKQLHSQHHLNPTLKIISPILPNVPICRNKDSHDKNQL 209
R + +K L+ T F+ S+ H H+ NP + SPI +KDS
Sbjct: 12 RSAEMMHLKNLQSKTLFFVFSPSRTFHRPHY-NPIRRFSSPI--------HKDSI----- 57
Query: 210 KQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKY 389
+IPP KT LY S +C LI+LYL C RF AS+TF MR+ L P+L WN LLY++
Sbjct: 58 ----LIPPTKTLLYASFFCALIRLYLACGRFYIASDTFSRMRALSLVPSLPLWNDLLYEF 113
Query: 390 NASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEIVDTVSY 569
NASG +SQV V+YSEM+L G V+PNV++ N+L+HSLCKVG+L ALG++R + D V+Y
Sbjct: 114 NASGFVSQVKVLYSEMVLCG-VVPNVFSVNLLVHSLCKVGDLGLALGYLRN-SVFDHVTY 171
Query: 570 NTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
NT++WGFCK+G+ +Q LSEM+KKG+ D TCN ++ G+C+IGLV
Sbjct: 172 NTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLV 219
Score = 67.4 bits (163), Expect = 5e-09
Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Frame = +3
Query: 345 LKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTA 524
L+P + +W L+ Y I + +Y +MI+SG V+P+V T + +++ LC+ G+L A
Sbjct: 325 LQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSG-VMPDVVTCSSILYGLCRHGKLTEA 383
Query: 525 LGFIRTVEIV----DTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNG 692
+R + + + VSY TII K G V +A S+M+ +GI +D+ C +++G
Sbjct: 384 AMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDG 443
Query: 693 FCRIG 707
+ G
Sbjct: 444 LFKAG 448
Score = 67.0 bits (162), Expect = 6e-09
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 39/211 (18%)
Frame = +3
Query: 183 KDSHDKNQLKQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQ 362
K+ ++ L ++ + V Y L K L ++ E F M GL P+
Sbjct: 621 KEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCV 679
Query: 363 SWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKT------- 521
++N ++ Y G + +EM G V+PN+ T NILI LCK G ++
Sbjct: 680 TYNSVMNTYFIQGKTENALDLLNEMKSYG-VMPNMVTYNILIGGLCKTGAIEKVISVLHE 738
Query: 522 --ALGFIRTVEI------------------------------VDTVSYNTIIWGFCKQGM 605
A+G++ T I ++ + YNT+I C+ GM
Sbjct: 739 MLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGM 798
Query: 606 VEQAVVFLSEMIKKGIQMDIFTCNNILNGFC 698
++A V L+EM+ KGI DI T N ++ G+C
Sbjct: 799 TKKANVVLTEMVIKGISADIVTYNALIRGYC 829
Score = 57.0 bits (136), Expect = 6e-06
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Frame = +3
Query: 279 LYLNCK--RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGE 452
LY C+ + +EA+ M + GL PN S+ ++ SG + + + S+M++ G
Sbjct: 371 LYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGI 430
Query: 453 VIPNVYTNNILIHSLCKVGELKTALGFIRTVE----IVDTVSYNTIIWGFCKQGMVEQAV 620
I V ++ L K G+ K A +T+ + + V+Y ++ G CK G VE A
Sbjct: 431 SIDLVLCTTMM-DGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAE 489
Query: 621 VFLSEMIKKGIQMDIFTCNNILNGFCRIGLVD 716
L +M K+ + ++ T ++I+NG+ + G+++
Sbjct: 490 TVLQKMEKEHVLPNVVTFSSIINGYAKKGMLN 521
>ref|XP_006583811.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like isoform X1 [Glycine max]
Length = 1037
Score = 204 bits (520), Expect = 2e-50
Identities = 108/228 (47%), Positives = 148/228 (64%)
Frame = +3
Query: 30 RMKSLNQIKKLKLFTQFYSILTSKQLHSQHHLNPTLKIISPILPNVPICRNKDSHDKNQL 209
R + +K L+ T F+ S+ H H+ NP + SPI +KDS
Sbjct: 12 RSAEMMHLKNLQSKTLFFVFSPSRTFHRPHY-NPIRRFSSPI--------HKDSI----- 57
Query: 210 KQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKY 389
+IPP KT LY S +C LI+LYL C RF AS+TF MR+ L P+L WN LLY++
Sbjct: 58 ----LIPPTKTLLYASFFCALIRLYLACGRFYIASDTFSRMRALSLVPSLPLWNDLLYEF 113
Query: 390 NASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEIVDTVSY 569
NASG +SQV V+YSEM+L G V+PNV++ N+L+HSLCKVG+L ALG++R + D V+Y
Sbjct: 114 NASGFVSQVKVLYSEMVLCG-VVPNVFSVNLLVHSLCKVGDLGLALGYLRN-SVFDHVTY 171
Query: 570 NTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
NT++WGFCK+G+ +Q LSEM+KKG+ D TCN ++ G+C+IGLV
Sbjct: 172 NTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLV 219
Score = 67.4 bits (163), Expect = 5e-09
Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Frame = +3
Query: 345 LKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTA 524
L+P + +W L+ Y I + +Y +MI+SG V+P+V T + +++ LC+ G+L A
Sbjct: 325 LQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSG-VMPDVVTCSSILYGLCRHGKLTEA 383
Query: 525 LGFIRTVEIV----DTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNG 692
+R + + + VSY TII K G V +A S+M+ +GI +D+ C +++G
Sbjct: 384 AMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDG 443
Query: 693 FCRIG 707
+ G
Sbjct: 444 LFKAG 448
Score = 67.0 bits (162), Expect = 6e-09
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 39/211 (18%)
Frame = +3
Query: 183 KDSHDKNQLKQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQ 362
K+ ++ L ++ + V Y L K L ++ E F M GL P+
Sbjct: 621 KEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCV 679
Query: 363 SWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKT------- 521
++N ++ Y G + +EM G V+PN+ T NILI LCK G ++
Sbjct: 680 TYNSVMNTYFIQGKTENALDLLNEMKSYG-VMPNMVTYNILIGGLCKTGAIEKVISVLHE 738
Query: 522 --ALGFIRTVEI------------------------------VDTVSYNTIIWGFCKQGM 605
A+G++ T I ++ + YNT+I C+ GM
Sbjct: 739 MLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGM 798
Query: 606 VEQAVVFLSEMIKKGIQMDIFTCNNILNGFC 698
++A V L+EM+ KGI DI T N ++ G+C
Sbjct: 799 TKKANVVLTEMVIKGISADIVTYNALIRGYC 829
Score = 65.5 bits (158), Expect = 2e-08
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Frame = +3
Query: 261 YCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMI 440
Y LI+ Y +A T+ M +G+ PN+ ++N LL + +GL+ + SEM
Sbjct: 821 YNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMR 880
Query: 441 LSGEVIPNVYTNNILIHSLCKVGELKTAL---------GFIRTVEIVDTVSYNTIIWGFC 593
G ++PN T NIL+ +VG + ++ GFI T T +YN +I +
Sbjct: 881 ERG-LVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPT-----TGTYNVLIQDYA 934
Query: 594 KQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRI 704
K G + QA L+EM+ +G + T + ++ G+C++
Sbjct: 935 KAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKL 971
Score = 57.0 bits (136), Expect = 6e-06
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Frame = +3
Query: 279 LYLNCK--RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGE 452
LY C+ + +EA+ M + GL PN S+ ++ SG + + + S+M++ G
Sbjct: 371 LYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGI 430
Query: 453 VIPNVYTNNILIHSLCKVGELKTALGFIRTVE----IVDTVSYNTIIWGFCKQGMVEQAV 620
I V ++ L K G+ K A +T+ + + V+Y ++ G CK G VE A
Sbjct: 431 SIDLVLCTTMM-DGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAE 489
Query: 621 VFLSEMIKKGIQMDIFTCNNILNGFCRIGLVD 716
L +M K+ + ++ T ++I+NG+ + G+++
Sbjct: 490 TVLQKMEKEHVLPNVVTFSSIINGYAKKGMLN 521
>ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 989
Score = 201 bits (511), Expect = 2e-49
Identities = 95/165 (57%), Positives = 128/165 (77%), Gaps = 2/165 (1%)
Frame = +3
Query: 225 IPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGL 404
IPP KTHLYVS +CTLI+LYL RFS AS TF MR+ GL P L WN LLY++NASGL
Sbjct: 50 IPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGL 109
Query: 405 ISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEIV--DTVSYNTI 578
+SQV ++YS+M+ G V+P+V++ N+L+HSLCKVG+L ALG++R ++V D V+YNT+
Sbjct: 110 VSQVKLMYSDMLFCG-VVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTV 168
Query: 579 IWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
IWGFC++G+V+Q LSEM+K+G+ D TCN ++ G+CRIGLV
Sbjct: 169 IWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLV 213
Score = 63.9 bits (154), Expect = 5e-08
Identities = 41/151 (27%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Frame = +3
Query: 279 LYLNCK--RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGE 452
LY C+ + +EA+ F M GL PN S+ ++ SG + + + + S+M++ G
Sbjct: 363 LYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRG- 421
Query: 453 VIPNVYTNNILIHSLCKVGELKTALGFIRTVEIVDT----VSYNTIIWGFCKQGMVEQAV 620
+ ++ T ++ L KVG+ K A T+ ++ V+Y+ ++ G+CK G +E A
Sbjct: 422 ISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAE 481
Query: 621 VFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
+ L +M K+ + ++ T ++I+NG+ + G++
Sbjct: 482 LVLQKMEKEHVPPNVITFSSIINGYAKKGML 512
Score = 62.8 bits (151), Expect = 1e-07
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Frame = +3
Query: 177 RNKDSHDKNQLKQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPN 356
+N D +N++K L+ P L T Y TLI Y E+ + M NG+ P+
Sbjct: 304 KNNDVVTQNEIKNLQ--PTLVT------YTTLIAAYCKFVGVEESHSLYKKMIMNGIMPD 355
Query: 357 LQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFI 536
+ + + +LY + G +++ V++ EM G + PN + +I+SL K G + A
Sbjct: 356 VVTCSSILYGFCRHGKLTEAAVLFREMYEMG-LDPNHVSYATIINSLFKSGRVMEAFNLQ 414
Query: 537 RTVEI----VDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRI 704
+ + D V+ T++ G K G ++A ++K + + T + +L+G+C++
Sbjct: 415 SQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKL 474
Query: 705 GLVD 716
G ++
Sbjct: 475 GKME 478
Score = 58.2 bits (139), Expect = 3e-06
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Frame = +3
Query: 297 RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTN 476
R EA + M S G+ P++ ++ L+ Y G + EM + +V
Sbjct: 581 RMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM-KEKNIRFDVVAY 639
Query: 477 NILIHSLCKVGELKTALGFIRTVEI---VDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKK 647
N LI L ++G+ R +E+ D ++YNTII +C +G E A+ L+EM
Sbjct: 640 NALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSY 699
Query: 648 GIQMDIFTCNNILNGFCRIGLV 713
GI + T N ++ G C+ G V
Sbjct: 700 GIMPNAVTYNILIGGLCKTGFV 721
>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 201 bits (511), Expect = 2e-49
Identities = 95/165 (57%), Positives = 128/165 (77%), Gaps = 2/165 (1%)
Frame = +3
Query: 225 IPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGL 404
IPP KTHLYVS +CTLI+LYL RFS AS TF MR+ GL P L WN LLY++NASGL
Sbjct: 50 IPPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGL 109
Query: 405 ISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEIV--DTVSYNTI 578
+SQV ++YS+M+ G V+P+V++ N+L+HSLCKVG+L ALG++R ++V D V+YNT+
Sbjct: 110 VSQVKLMYSDMLFCG-VVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTV 168
Query: 579 IWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
IWGFC++G+V+Q LSEM+K+G+ D TCN ++ G+CRIGLV
Sbjct: 169 IWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLV 213
Score = 68.6 bits (166), Expect = 2e-09
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 42/208 (20%)
Frame = +3
Query: 201 NQLKQLKVIPPLKT---HLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWN 371
NQL L ++ +K V Y LIK L ++ + M GL P+ ++N
Sbjct: 616 NQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYN 674
Query: 372 QLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELK---TALGFIRT 542
++ Y G + +EM G ++PN T NILI LCK G ++ +AL +
Sbjct: 675 TIINTYCIKGKTEDALDILNEMKSYG-IMPNAVTYNILIGGLCKTGAVEKAESALDEMLV 733
Query: 543 VEIVDT------------------------------------VSYNTIIWGFCKQGMVEQ 614
+E V T YNT+I FC+ GM +
Sbjct: 734 MEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRK 793
Query: 615 AVVFLSEMIKKGIQMDIFTCNNILNGFC 698
A V L EM+K+GI D+ T N ++ G+C
Sbjct: 794 AKVVLDEMVKRGISADLVTYNALIRGYC 821
Score = 63.9 bits (154), Expect = 5e-08
Identities = 41/151 (27%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Frame = +3
Query: 279 LYLNCK--RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGE 452
LY C+ + +EA+ F M GL PN S+ ++ SG + + + + S+M++ G
Sbjct: 363 LYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRG- 421
Query: 453 VIPNVYTNNILIHSLCKVGELKTALGFIRTVEIVDT----VSYNTIIWGFCKQGMVEQAV 620
+ ++ T ++ L KVG+ K A T+ ++ V+Y+ ++ G+CK G +E A
Sbjct: 422 ISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAE 481
Query: 621 VFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
+ L +M K+ + ++ T ++I+NG+ + G++
Sbjct: 482 LVLQKMEKEHVPPNVITFSSIINGYAKKGML 512
Score = 62.8 bits (151), Expect = 1e-07
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Frame = +3
Query: 177 RNKDSHDKNQLKQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPN 356
+N D +N++K L+ P L T Y TLI Y E+ + M NG+ P+
Sbjct: 304 KNNDVVTQNEIKNLQ--PTLVT------YTTLIAAYCKFVGVEESHSLYKKMIMNGIMPD 355
Query: 357 LQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFI 536
+ + + +LY + G +++ V++ EM G + PN + +I+SL K G + A
Sbjct: 356 VVTCSSILYGFCRHGKLTEAAVLFREMYEMG-LDPNHVSYATIINSLFKSGRVMEAFNLQ 414
Query: 537 RTVEI----VDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRI 704
+ + D V+ T++ G K G ++A ++K + + T + +L+G+C++
Sbjct: 415 SQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKL 474
Query: 705 GLVD 716
G ++
Sbjct: 475 GKME 478
Score = 58.5 bits (140), Expect = 2e-06
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 24/175 (13%)
Frame = +3
Query: 255 SLYCT-LIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYS 431
S+ C L+K Y A + G+ ++ N L+ Y +GL+SQ +
Sbjct: 197 SITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIE 256
Query: 432 EMILSGEVIPNVYTNNILIHSLCKVGELKTA-------LGF------IRTVEIVDT---- 560
S +V ++ T N L+ + CK G+L A LGF ++ ++V
Sbjct: 257 NSWRS-DVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIK 315
Query: 561 ------VSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
V+Y T+I +CK VE++ +MI GI D+ TC++IL GFCR G
Sbjct: 316 NLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHG 370
Score = 58.5 bits (140), Expect = 2e-06
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
Frame = +3
Query: 297 RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTN 476
R EA + M S G+ P++ ++ L+ Y G + EM + +V
Sbjct: 581 RMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM-KEKNIRFDVVAY 639
Query: 477 NILIHSLCKVGELKTALGFIRTVEI---VDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKK 647
N LI L ++G+ R +E+ D ++YNTII +C +G E A+ L+EM
Sbjct: 640 NALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSY 699
Query: 648 GIQMDIFTCNNILNGFCRIGLVD 716
GI + T N ++ G C+ G V+
Sbjct: 700 GIMPNAVTYNILIGGLCKTGAVE 722
>gb|EXB68732.1| hypothetical protein L484_024754 [Morus notabilis]
Length = 1019
Score = 199 bits (506), Expect = 8e-49
Identities = 94/163 (57%), Positives = 125/163 (76%)
Frame = +3
Query: 225 IPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGL 404
IPP K H+Y S +CTLI LYL RFS+A++ F MR+ GL P L WN+LLY++NASGL
Sbjct: 42 IPPSKNHVYASFFCTLIHLYLAGGRFSDATDAFSRMRNRGLVPVLPHWNRLLYEFNASGL 101
Query: 405 ISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEIVDTVSYNTIIW 584
+SQV ++YSEM+ G V+PN++T N+L+HSLCK+G+L AL +R E VDTV+YNT++W
Sbjct: 102 VSQVRLLYSEMLSCG-VVPNLFTRNVLVHSLCKLGDLVMALDLLRNHE-VDTVTYNTVVW 159
Query: 585 GFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
GFCKQG+ QA LSEM+K+ + +D +TCN I+NGFCRI LV
Sbjct: 160 GFCKQGLAHQAFGILSEMVKRDVPIDSYTCNTIVNGFCRIELV 202
Score = 68.9 bits (167), Expect = 2e-09
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Frame = +3
Query: 258 LYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEM 437
+Y LI + +A+ MR G+ + ++N L++ Y S + + + YS+M
Sbjct: 767 VYNNLISVLCRVGMTKKATSVLKEMREAGISADTSTYNALIHGYCLSSHLQRAFTTYSQM 826
Query: 438 ILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVE----IVDTVSYNTIIWGFCKQGM 605
+ G V PN T N+L+ LC G ++ A F+ ++ + D +YNT++ G K G
Sbjct: 827 LAEG-VSPNNETYNLLLRGLCGAGFMRGAEKFLDEIKERGFVPDASTYNTLVSGHGKAGN 885
Query: 606 VEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLVDD 719
++ + EMI KG T N ++ F ++G + +
Sbjct: 886 RKEYMKLYCEMITKGFIPRTSTYNVLIGDFAKVGKMSE 923
Score = 59.7 bits (143), Expect = 1e-06
Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Frame = +3
Query: 279 LYLNCK--RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGE 452
LY CK + EA M G+ PN S+ + S + +++ +M++ G
Sbjct: 354 LYGLCKHGKLYEAKVLLTEMEQMGVDPNHVSYTTFIDSLFKSRSEVEAFMLQCQMVVRGL 413
Query: 453 VIPNVYTNNILIHSLCKVGELKTALGFIRTVEI---VDTVSYNTIIWGFCKQGMVEQAVV 623
V ++ +++I L KVG+ K A +T+ + + ++Y+ +I G CK G ++ A+
Sbjct: 414 VF-DLVVFSVIIDGLLKVGKAKEAEETYKTLRLNFLPNHITYSILINGHCKLGDMKNAMS 472
Query: 624 FLSEMIKKGIQMDIFTCNNILNGFCRIGLVDD 719
L EM +K I + T ++I+NG+ + G++D+
Sbjct: 473 ILQEMEEKHIYPNFITYSSIINGYMKKGMIDE 504
Score = 59.3 bits (142), Expect = 1e-06
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Frame = +3
Query: 261 YCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMI 440
Y T++ Y F A E + MRS G PN + N L+ +G + + ++ +
Sbjct: 663 YNTMVSAYCRQGNFQNAYELWNEMRSQGFMPNSNASNSLIKSLCDAGETEKAMDLLNKTL 722
Query: 441 LSGEVIPNVYTNNILIHSLCK---VGELKTALGFIRTVEI-VDTVSYNTIIWGFCKQGMV 608
+ G ++ + T+ IL+ + K E+ G + + +D V YN +I C+ GM
Sbjct: 723 VDGSILTS-STHEILLKASSKRRRAEEIFKMHGKLLGFGLKLDRVVYNNLISVLCRVGMT 781
Query: 609 EQAVVFLSEMIKKGIQMDIFTCNNILNGFC 698
++A L EM + GI D T N +++G+C
Sbjct: 782 KKATSVLKEMREAGISADTSTYNALIHGYC 811
Score = 57.4 bits (137), Expect = 5e-06
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Frame = +3
Query: 306 EASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNIL 485
EA + MR GL P+ ++N ++ Y G + +++EM G +PN +N L
Sbjct: 643 EAQSIYNGMREFGLAPDNATYNTMVSAYCRQGNFQNAYELWNEMRSQG-FMPNSNASNSL 701
Query: 486 IHSLCKVGELKTALGFIRTV----EIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGI 653
I SLC GE + A+ + I+ + ++ ++ K+ E+ +++ G+
Sbjct: 702 IKSLCDAGETEKAMDLLNKTLVDGSILTSSTHEILLKASSKRRRAEEIFKMHGKLLGFGL 761
Query: 654 QMDIFTCNNILNGFCRIGL 710
++D NN+++ CR+G+
Sbjct: 762 KLDRVVYNNLISVLCRVGM 780
>ref|XP_007029760.1| Pentatricopeptide repeat-containing protein, putative isoform 3
[Theobroma cacao] gi|508718365|gb|EOY10262.1|
Pentatricopeptide repeat-containing protein, putative
isoform 3 [Theobroma cacao]
Length = 1032
Score = 197 bits (500), Expect = 4e-48
Identities = 96/166 (57%), Positives = 121/166 (72%), Gaps = 3/166 (1%)
Frame = +3
Query: 225 IPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGL 404
IP K+HLY SL+CTLI LYL C RFS+A +TF MR +G+ P L WN L+Y +NASGL
Sbjct: 52 IPSSKSHLYASLFCTLIHLYLTCGRFSQAKDTFCNMRKHGVIPVLPLWNHLIYSFNASGL 111
Query: 405 ISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTV---EIVDTVSYNT 575
+S+V ++YSEMI G V+PNV+T N+L+HSL KVG L AL +R V VDTV+YNT
Sbjct: 112 VSEVMLLYSEMIACG-VLPNVFTINVLVHSLAKVGNLSFALELLRNVGNNNNVDTVTYNT 170
Query: 576 IIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
+IWGFC+QG+ Q LSEM+KKGI D F+CN ++ GFCRIG V
Sbjct: 171 LIWGFCEQGLAYQGFGLLSEMVKKGINFDTFSCNIVVKGFCRIGFV 216
Score = 65.1 bits (157), Expect = 2e-08
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 39/189 (20%)
Frame = +3
Query: 252 VSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYS 431
V +Y LI L ++ EA + MR L P+L + N ++ Y G ++
Sbjct: 642 VVVYNVLINGLLRLGKY-EAQSVYARMRELDLAPDLITCNTMINAYCKEGKFEYALNLWD 700
Query: 432 EMILSGEVIPNVYTNNILIHSLCKVGELKTAL---------GFIRTVEI----------- 551
+M G ++PN T NILI LC+ GE++ AL GF T I
Sbjct: 701 DMKSCG-LMPNSITCNILIRGLCRAGEIQKALNVLNEMLVLGFSPTTAIHKFLLDASSRN 759
Query: 552 -------------------VDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTC 674
++ +NT+I C+ GM ++A+ L++M +G D T
Sbjct: 760 GRADAILLMHECLVSMGLKLNQAVFNTLITVLCRLGMTKKAISALNDMTGRGFSADTITY 819
Query: 675 NNILNGFCR 701
N ++NG+CR
Sbjct: 820 NALINGYCR 828
Score = 60.5 bits (145), Expect = 6e-07
Identities = 35/133 (26%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Frame = +3
Query: 327 VMRSNGLKPNLQS--WNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLC 500
++R+ G N+ + +N L++ + GL Q + + SEM+ G + + ++ NI++ C
Sbjct: 153 LLRNVGNNNNVDTVTYNTLIWGFCEQGLAYQGFGLLSEMVKKG-INFDTFSCNIVVKGFC 211
Query: 501 KVGELKTALGFIRTVE----IVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIF 668
++G +K + + D + +N +I G+CK G + AV + M ++G+ DI
Sbjct: 212 RIGFVKYGEWVMDNLVNGGIFKDVIGFNILIDGYCKSGDMNYAVQIMDRMRREGLVPDII 271
Query: 669 TCNNILNGFCRIG 707
+ N +++GFC+ G
Sbjct: 272 SYNTLIDGFCKKG 284
Score = 60.1 bits (144), Expect = 7e-07
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Frame = +3
Query: 297 RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTN 476
+F+EA M M G+ PN S++ L+ + +G + + S+M++ G + +V
Sbjct: 377 KFAEAKVLLMEMEKMGVDPNHVSYSTLVDSFFKAGNSMDAFALQSQMVVRG-IAFDVVVY 435
Query: 477 NILIHSLCKVGELKTALGFIRTV----EIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIK 644
L+ L KVG+ K A T+ + + +Y +I G CK G + A L EM +
Sbjct: 436 TTLMDGLFKVGKPKEAENTFSTLLKHKLVPNLTTYAALIDGRCKSGDINGAESALKEMKE 495
Query: 645 KGIQMDIFTCNNILNGFCRIGLVDD 719
K + ++ T ++++N + R G++D+
Sbjct: 496 KNVVPNVVTYSSVINSYIRKGMLDE 520
Score = 59.3 bits (142), Expect = 1e-06
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Frame = +3
Query: 261 YCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMI 440
Y LI Y +A T+ M G+ PN+ ++N LL + +GL+ + ++S+M
Sbjct: 819 YNALINGYCRGSHIKKAFATYSHMLREGVPPNVVTYNLLLRGLSTAGLMKEADELFSQMK 878
Query: 441 LSGEVIPNVYTNNILIHSLCKVGE----LKTALGFIRTVEIVDTVSYNTIIWGFCKQGMV 608
G + PN T + LI K+G +K I + T +YN +I GF K G +
Sbjct: 879 EKG-LNPNASTYDTLISGHGKIGNKRESVKVYCEMISKGFVPRTGTYNLLISGFAKIGKM 937
Query: 609 EQAVVFLSEMIKKGIQMDIFTCNNILNGFCRI 704
QA L EM +G + T + +++G+C +
Sbjct: 938 SQARELLKEMQLRGALPNSSTYDILISGWCNL 969
Score = 57.0 bits (136), Expect = 6e-06
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Frame = +3
Query: 297 RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTN 476
R EA M S GL + ++ L+ + G S ++ EM + +V
Sbjct: 587 RMGEAEVLVKDMMSKGLSLDHVNYTSLMDGFFKEGKDSAALILAQEMT-EKNITFDVVVY 645
Query: 477 NILIHSLCKVGELKTALGFIRTVEI---VDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKK 647
N+LI+ L ++G+ + + R E+ D ++ NT+I +CK+G E A+ +M
Sbjct: 646 NVLINGLLRLGKYEAQSVYARMRELDLAPDLITCNTMINAYCKEGKFEYALNLWDDMKSC 705
Query: 648 GIQMDIFTCNNILNGFCRIG 707
G+ + TCN ++ G CR G
Sbjct: 706 GLMPNSITCNILIRGLCRAG 725
>ref|XP_004505033.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Cicer arietinum]
Length = 1011
Score = 195 bits (495), Expect = 1e-47
Identities = 89/165 (53%), Positives = 127/165 (76%), Gaps = 1/165 (0%)
Frame = +3
Query: 222 VIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASG 401
+IPP KTHLY S + TL++LYL C R + AS+ F+ MR+ GL P L WN+LLY++N+SG
Sbjct: 32 LIPPTKTHLYASFFITLVRLYLKCGRVNTASDAFLRMRNLGLVPTLPLWNKLLYEFNSSG 91
Query: 402 LISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIR-TVEIVDTVSYNTI 578
L+SQV V+YS+M+L G V+P+V++ N+L+HSLC G+L ALG++R V +D V+YNT+
Sbjct: 92 LVSQVKVMYSDMVLCG-VVPDVFSVNVLVHSLCNAGDLNLALGYLRNNVVDIDNVTYNTV 150
Query: 579 IWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
IWGFC++G+V+Q LSEM+KKG+ D TCN ++ G+C+IGLV
Sbjct: 151 IWGFCEKGLVDQGFGLLSEMVKKGLCFDSITCNVLVKGYCKIGLV 195
Score = 73.2 bits (178), Expect = 8e-11
Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 42/261 (16%)
Frame = +3
Query: 42 LNQIKKLKLFTQFYSILTSKQLHSQHHLNPTLKIISPILPNVPICRNKDSHDKNQLKQLK 221
LN +K++ + ++ K +HS K I P + N + + N+L L
Sbjct: 555 LNNLKRVGRMEEAQLLI--KDMHS--------KGIDPDIVNYSSLIDGYFKEGNELAALS 604
Query: 222 VIPPL---KTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYN 392
++ + T V Y TLIK L ++ E M GL P+ ++N ++ Y
Sbjct: 605 IVQEMAEKNTRFDVVAYNTLIKGLLRLGKY-EPQSVCSRMVELGLAPDCVTYNTIINTYC 663
Query: 393 ASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEIVDTVS-- 566
G I + +EM S ++PN T NILI LCK G ++ A+G + + ++ +
Sbjct: 664 IKGNIGNAIDLLNEM-KSYRIMPNAVTYNILIGGLCKTGAIEKAMGVLNEMLVMGFIPTP 722
Query: 567 -------------------------------------YNTIIWGFCKQGMVEQAVVFLSE 635
YNT+I C+ GM ++A V L+E
Sbjct: 723 ITHKFLLKASSRSKRADAILQIHKKLVAMGLELNRTVYNTLITVLCRLGMTKRANVVLNE 782
Query: 636 MIKKGIQMDIFTCNNILNGFC 698
M+K GI D T N ++ G+C
Sbjct: 783 MVKSGISADYVTYNALIRGYC 803
Score = 64.3 bits (155), Expect = 4e-08
Identities = 33/130 (25%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Frame = +3
Query: 330 MRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVG 509
+R+N + + ++N +++ + GL+ Q + + SEM+ G ++ T N+L+ CK+G
Sbjct: 135 LRNNVVDIDNVTYNTVIWGFCEKGLVDQGFGLLSEMVKKGLCFDSI-TCNVLVKGYCKIG 193
Query: 510 ELKTA----LGFIRTVEIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCN 677
++ A + D + NT+I G+C+ G++ QA+ + +++D+ T N
Sbjct: 194 LVQYAEWVMYNLVGGGVSKDVMGLNTLIDGYCEAGLMNQALALMENSWWSDVKVDVVTYN 253
Query: 678 NILNGFCRIG 707
++ GFC++G
Sbjct: 254 TLIKGFCKMG 263
Score = 60.5 bits (145), Expect = 6e-07
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
Frame = +3
Query: 261 YCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMI 440
Y LI+ Y +A +T+ M +G+ PN+ ++N LL + + L+ + + SEM
Sbjct: 795 YNALIRGYCTGSHVEKAFKTYSQMLVDGISPNITTYNTLLGGLSTASLMGETDRLVSEMK 854
Query: 441 LSGEVIPNVYTNNILIHSLCKVGELKTAL---------GFIRTVEIVDTVSYNTIIWGFC 593
G ++PN T +IL+ +VG + ++ GF+ T T +YN +I +
Sbjct: 855 EIG-LVPNATTYDILVSGHGRVGNKQDSIKIYCEMITKGFVPT-----TGTYNVLISDYA 908
Query: 594 KQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRI 704
K G + QA L+EM+ +G + T + ++ G+C++
Sbjct: 909 KAGKMRQARELLNEMLTRGRIPNSSTYDILICGWCKL 945
Score = 58.2 bits (139), Expect = 3e-06
Identities = 36/142 (25%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Frame = +3
Query: 297 RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTN 476
+ +EA+ F M GL PN S++ ++ SG + + S+M++ G V
Sbjct: 353 KLTEATVLFREMYEMGLDPNHVSYSIIINSLFKSGRAMEALSLQSQMVVRGIYFDIVMCT 412
Query: 477 NILIHSLCKVGELKTALGFIRTVE----IVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIK 644
+++ L KVG+ K A +++ + + V+Y+ ++ G+CK G +E A + L M +
Sbjct: 413 TMMV-GLFKVGKSKEAEEMFQSISKLNLVPNCVAYSALLDGYCKLGDMEFAELVLQRMEQ 471
Query: 645 KGIQMDIFTCNNILNGFCRIGL 710
+ + ++ T ++I+NG+ + G+
Sbjct: 472 EHVPPNVITFSSIINGYAKKGM 493
Score = 57.0 bits (136), Expect = 6e-06
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Frame = +3
Query: 252 VSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYS 431
V Y TLI Y E+ + M NG+ P++ + + +LY + G +++ V++
Sbjct: 303 VVTYTTLISAYCKYVGVEESLSLYEQMIMNGIMPDVVTCSSILYGLSRHGKLTEATVLFR 362
Query: 432 EMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEI----VDTVSYNTIIWGFCKQ 599
EM G + PN + +I+I+SL K G AL + + D V T++ G K
Sbjct: 363 EMYEMG-LDPNHVSYSIIINSLFKSGRAMEALSLQSQMVVRGIYFDIVMCTTMMVGLFKV 421
Query: 600 GMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
G ++A + K + + + +L+G+C++G
Sbjct: 422 GKSKEAEEMFQSISKLNLVPNCVAYSALLDGYCKLG 457
>ref|XP_002325452.2| hypothetical protein POPTR_0019s06000g [Populus trichocarpa]
gi|550316902|gb|EEE99833.2| hypothetical protein
POPTR_0019s06000g [Populus trichocarpa]
Length = 941
Score = 192 bits (487), Expect = 1e-46
Identities = 94/165 (56%), Positives = 122/165 (73%), Gaps = 2/165 (1%)
Frame = +3
Query: 225 IPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVM-RSNGLKPNLQSWNQLLYKYNASG 401
I P KTHLY S +CTLI LYL C R S+A++TF M R++ + P L WN+L+Y++NA+G
Sbjct: 43 ISPTKTHLYASFFCTLIHLYLTCGRLSKATDTFYDMIRTHHIVPTLPLWNRLIYQFNATG 102
Query: 402 LISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEI-VDTVSYNTI 578
L+SQVW +YSEM+ G V+PNV+T+NIL+H+ CK+G L AL IR V+I VDTV+YNT
Sbjct: 103 LVSQVWDLYSEMLSCG-VLPNVFTHNILVHAWCKMGHLSLALDLIRNVDIDVDTVTYNTA 161
Query: 579 IWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
IWGFC+QG+ Q FLS M+KK D FTCN ++ GFCRIG V
Sbjct: 162 IWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSV 206
Score = 58.2 bits (139), Expect = 3e-06
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Frame = +3
Query: 258 LYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEM 437
+Y +LI + A+ M G+ + ++N L++ + S I + Y++M
Sbjct: 689 VYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQM 748
Query: 438 ILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEIV----DTVSYNTIIWGFCKQGM 605
+ G V P + T N+L+ L G + A + ++ D YNT+I G K G
Sbjct: 749 LNEG-VSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGN 807
Query: 606 VEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLVD 716
++A+ F EM+ KG+ T N ++ F ++G +D
Sbjct: 808 KKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMD 844
>ref|XP_007159307.1| hypothetical protein PHAVU_002G227100g [Phaseolus vulgaris]
gi|561032722|gb|ESW31301.1| hypothetical protein
PHAVU_002G227100g [Phaseolus vulgaris]
Length = 976
Score = 180 bits (457), Expect = 4e-43
Identities = 88/186 (47%), Positives = 125/186 (67%), Gaps = 1/186 (0%)
Frame = +3
Query: 159 PNVPICRNKDSHDKNQLKQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRS 338
P +P+ R K+ + +IPP KTHLY S +CTLI+LYL RF AS F MR+
Sbjct: 32 PLIPVRRFSSLLPKDSI----LIPPTKTHLYASFFCTLIRLYLASGRFCIASHAFSRMRA 87
Query: 339 NGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELK 518
L P+L WN LLY++NA GL+SQV V+YSEM+ G V PNV++ N+L+HSLCK G+L
Sbjct: 88 LSLVPSLPLWNDLLYEFNACGLVSQVRVLYSEMVFCG-VGPNVFSVNVLVHSLCKAGDLG 146
Query: 519 TALGFIRTVEIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKK-GIQMDIFTCNNILNGF 695
A+G++R + D V+YNT++WGFCK G+ +Q LSEM+KK G+ +D+ N +++G+
Sbjct: 147 LAIGYLRNNSVFDQVTYNTVLWGFCKHGLADQGFGLLSEMVKKGGVPLDVIGLNTLVDGY 206
Query: 696 CRIGLV 713
C L+
Sbjct: 207 CEAELM 212
Score = 71.6 bits (174), Expect = 2e-10
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Frame = +3
Query: 261 YCTLIKLYLNCKRFSEASETFMVMRSNG----LKPNLQSWNQLLYKYNASGLISQVWVVY 428
Y TL+ + CK+ A ++ G L+P + +W L+ Y + +Y
Sbjct: 234 YNTLLNAF--CKKGDLAKAKSLINEILGFQRDLQPTVITWTTLIAAYCKHHETGEFLSLY 291
Query: 429 SEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEIVDT----VSYNTIIWGFCK 596
+M++SG ++P+V T + +++ LC+ G+L A +R + +D VSY TII K
Sbjct: 292 EQMVMSG-IMPDVVTCSSILYGLCRHGKLPEAAVLLREMYKMDLDPNHVSYTTIIDALLK 350
Query: 597 QGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLVDD 719
G V +A F S+MI +GI D+ C I++G + G D
Sbjct: 351 SGRVMEAFNFQSQMIVRGISFDLVLCTTIMDGLFKAGKPKD 391
Score = 71.6 bits (174), Expect = 2e-10
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 39/211 (18%)
Frame = +3
Query: 183 KDSHDKNQLKQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQ 362
K+ ++ L ++ + V Y LIK L ++ E F M GL P+
Sbjct: 560 KEGNESAALSIVQEMTEKNIQFDVVAYNALIKGLLRPGKY-EPKSVFSRMMELGLTPDCV 618
Query: 363 SWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTAL----- 527
++N ++ Y G + +EM G V+PN+ T NILI LCK G ++ A+
Sbjct: 619 TYNTMINTYFIQGKNENALDLLNEMKCYG-VMPNMVTYNILIGGLCKTGAIEKAMDVLNE 677
Query: 528 ----GFIRTVEI------------------------------VDTVSYNTIIWGFCKQGM 605
G+I T I +D YNT+I C GM
Sbjct: 678 MLLMGYIPTPIIHKFLLKAYSRSRKADVILQIHKKLLAMGLKLDQTVYNTLITVLCSLGM 737
Query: 606 VEQAVVFLSEMIKKGIQMDIFTCNNILNGFC 698
++A V L+EM+ KGIQ DI T N ++ G+C
Sbjct: 738 TKKANVVLTEMVTKGIQADIVTYNALICGYC 768
Score = 67.0 bits (162), Expect = 6e-09
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
Frame = +3
Query: 261 YCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMI 440
Y LI Y +A +TF M +G+ PN+ ++N LL ++ +GL+ + SEM
Sbjct: 760 YNALICGYCTGSHVEKAIDTFSQMLVDGISPNISTYNTLLEGFSTAGLMRDADKLISEMK 819
Query: 441 LSGEVIPNVYTNNILIHSLCKVGELKTAL---------GFIRTVEIVDTVSYNTIIWGFC 593
G ++PN T NIL+ ++G + ++ GFI T T +YN +I +
Sbjct: 820 ERG-LVPNASTYNILVSGHGRIGNKRDSIKLYCEMVTKGFIPT-----TGTYNVLIQDYA 873
Query: 594 KQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRI 704
K G + QA L+EM+ +G + T + ++ G+C++
Sbjct: 874 KAGKMHQARELLNEMLTRGRIPNSSTFDILICGWCKL 910
>ref|XP_006344657.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 1035
Score = 169 bits (429), Expect = 7e-40
Identities = 84/165 (50%), Positives = 117/165 (70%), Gaps = 4/165 (2%)
Frame = +3
Query: 231 PLKTH----LYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNAS 398
P++TH L+ S +CTL+ L+L C R S A+ETF MR+ L P+L SWN+LL+ +N++
Sbjct: 45 PIQTHPKKSLHTSFFCTLVHLFLRCHRLSRATETFSSMRNYNLVPDLPSWNRLLHHFNSA 104
Query: 399 GLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEIVDTVSYNTI 578
GL+ QV V+YS+M+ G V NV T NI++HSLCKVG+L+ AL +R E DTV+YNT+
Sbjct: 105 GLVDQVIVLYSDMLACG-VASNVVTRNIVVHSLCKVGKLEKALELLRENE-SDTVTYNTL 162
Query: 579 IWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
IWGFC+ G VE +S+M+KKGI +D TCN ++ GFC GL+
Sbjct: 163 IWGFCRIGFVEMGFGLVSDMLKKGIFIDTITCNILIKGFCDKGLL 207
Score = 62.4 bits (150), Expect = 1e-07
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Frame = +3
Query: 297 RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTN 476
+ EA FM M S GL P+ ++ L+ G S + EM ++ +
Sbjct: 588 KMDEAEAIFMDMVSKGLSPDHVNYTSLMDGLFKKGKESDALQLVEEM-KEKKICFDTIAC 646
Query: 477 NILIHSLCKVG--ELKTALGFIRTVEIV-DTVSYNTIIWGFCKQGMVEQAVVFLSEMIKK 647
N+L++ L +G E+++ IR + +V D ++N++I +CK+G +E AV EM
Sbjct: 647 NVLLNGLLGIGQYEVQSVYAEIRKLGLVPDIQTFNSLIDAYCKEGKLESAVKVWVEMKSS 706
Query: 648 GIQMDIFTCNNILNGFCRIGLVD 716
GI + TCN ++ G C +G ++
Sbjct: 707 GIMPNSITCNILVKGLCEVGDIE 729
Score = 56.6 bits (135), Expect = 8e-06
Identities = 45/191 (23%), Positives = 98/191 (51%), Gaps = 9/191 (4%)
Frame = +3
Query: 171 ICRNKDSHD-KNQLKQLKVIPPLKTHLYVSLYCTLIKLYLN-CKRFSEASETFMVMRSNG 344
+C+N+ H+ K L +++ + H+ S++ + LY N ++ + ++ +V+R G
Sbjct: 373 LCKNERFHEAKLLLDEMRRVGVDPNHVTYSIF--IHHLYKNKAEKVAANFQSQIVIR--G 428
Query: 345 LKPNLQSWNQL---LYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGEL 515
+ ++ + L L+K S V+ + +L + PN T L+ CK G+L
Sbjct: 429 VPFDVVLFTSLINGLFKIGKSREAKDVF----QTLLKSNITPNHITYTALVDGHCKSGDL 484
Query: 516 KTALGFIRTVE----IVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNI 683
K+ ++ +E + + V+++++I G+ K GMVE A+ + +M+ + ++FT N +
Sbjct: 485 KSVEILLQQMEQKGVLPNVVTFSSVINGYAKSGMVEAAIEIMRKMVSINVNPNVFTYNTL 544
Query: 684 LNGFCRIGLVD 716
++G + G D
Sbjct: 545 IDGCFKAGKHD 555
>ref|XP_004231279.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Solanum lycopersicum]
Length = 1035
Score = 168 bits (426), Expect = 1e-39
Identities = 83/165 (50%), Positives = 116/165 (70%), Gaps = 4/165 (2%)
Frame = +3
Query: 231 PLKTH----LYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNAS 398
P++TH LY S +CTLI L+L C R S A+ETF MR+ L P++ SWN+LL+ +N++
Sbjct: 45 PIQTHRKKSLYTSFFCTLIHLFLRCHRLSRATETFSSMRNYNLVPDIPSWNRLLHHFNSA 104
Query: 399 GLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEIVDTVSYNTI 578
GL+ QV ++YS+M+ G V NV T NI++HSLCKVG+L+ AL +R E DTV+YNT+
Sbjct: 105 GLVDQVIILYSDMLACG-VASNVVTRNIVVHSLCKVGKLEKALELLRENE-SDTVTYNTL 162
Query: 579 IWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLV 713
IWGFC+ VE LS+M+KKG+ +D TCN ++ GFC GL+
Sbjct: 163 IWGFCRIEFVEMGFGLLSDMLKKGVFIDTITCNILIKGFCDKGLL 207
Score = 67.4 bits (163), Expect = 5e-09
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Frame = +3
Query: 261 YCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMI 440
Y I+ Y +F + T+ M + G+ PN+ ++N +L +A GLI++ +++EM
Sbjct: 820 YNAFIRGYCKSYQFQKVFATYSQMLAKGVPPNVATYNTMLASLSAVGLINEAVDLFNEMK 879
Query: 441 LSGEVIPNVYTNNILIHSLCKVGELKTAL----GFIRTVEIVDTVSYNTIIWGFCKQGMV 608
G +PN T +IL+ K+G K ++ I + T +YN +I+ F K G +
Sbjct: 880 GRG-FVPNANTYDILVSGHGKIGNKKESIKLYCEMITKGFVPRTSTYNVLIFDFAKAGKM 938
Query: 609 EQAVVFLSEMIKKGIQMDIFTCNNILNGFCRI 704
QA + EM +G+ + T + +L G+C++
Sbjct: 939 RQAQELMHEMQVRGVIPNSSTYDILLVGWCKL 970
Score = 64.7 bits (156), Expect = 3e-08
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Frame = +3
Query: 267 TLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILS 446
T +K + EA FM M S GL P+ ++ L+ G S + EM
Sbjct: 578 TFVKNLKKLGKMDEAEAIFMDMTSKGLSPDHVNYTSLIDGLFKKGKESDALQLVEEM-KE 636
Query: 447 GEVIPNVYTNNILIHSLCKVG--ELKTALGFIRTVEIV-DTVSYNTIIWGFCKQGMVEQA 617
++ + N+L++ L +G E+++ IR + +V D ++N++I +CK+G +E A
Sbjct: 637 KKICFDTIAWNVLLNGLLGIGQYEVQSVYAEIRKLGLVPDVQTFNSLIDAYCKEGKLESA 696
Query: 618 VVFLSEMIKKGIQMDIFTCNNILNGFCRIGLVD 716
V EM GI + TCN ++ G C +G ++
Sbjct: 697 VKVWVEMKSSGIMPNSITCNILVKGLCEVGDIE 729
Score = 57.0 bits (136), Expect = 6e-06
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 4/160 (2%)
Frame = +3
Query: 252 VSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYS 431
V L+ TLI + EA + F + + PN ++ L+ SG V ++
Sbjct: 433 VVLFTTLINGLFKVGKSREAKDMFQTLLECNITPNHITYTALVDGLCKSGDFKSVEILLQ 492
Query: 432 EMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEIV----DTVSYNTIIWGFCKQ 599
+M G V+PNV T + +I+ K G ++ A+ +R + + + +YNT+I G K
Sbjct: 493 QMEQKG-VLPNVVTFSSVINGYAKSGMVEAAIEIMRKMVSINVSPNVFTYNTLIDGCFKA 551
Query: 600 GMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLVDD 719
G + A+ EM G++ + F + + ++G +D+
Sbjct: 552 GKHDMALALYEEMQSNGVEENEFLLDTFVKNLKKLGKMDE 591
>ref|XP_006399994.1| hypothetical protein EUTSA_v10012597mg [Eutrema salsugineum]
gi|557101084|gb|ESQ41447.1| hypothetical protein
EUTSA_v10012597mg [Eutrema salsugineum]
Length = 938
Score = 153 bits (387), Expect = 5e-35
Identities = 75/163 (46%), Positives = 114/163 (69%), Gaps = 2/163 (1%)
Frame = +3
Query: 225 IPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGL 404
+ P KT +YVSL+ TL +LY++C R A+ T M + G+ P+L+ WN L++ +N L
Sbjct: 49 LAPNKTRVYVSLFHTLFRLYVSCGRLYGAARTLSAMCTFGVVPDLRLWNSLIHHFNVHCL 108
Query: 405 IS-QVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRT-VEIVDTVSYNTI 578
+ QV ++YS+MI G V P+V+ N+LIHSLC+VG+L+ ++ +R V VDTV+YNT+
Sbjct: 109 VPHQVSLIYSKMIACG-VAPDVFALNVLIHSLCRVGQLRFSVSLLRNRVISVDTVTYNTV 167
Query: 579 IWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
IWG C+ G+ ++A FLSEM+KKGI D + N ++NGFC++G
Sbjct: 168 IWGLCEHGLADEAYRFLSEMVKKGILPDTVSYNTLINGFCKVG 210
Score = 62.8 bits (151), Expect = 1e-07
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 4/199 (2%)
Frame = +3
Query: 123 LNPTLKIISPILPNVPICRNKDSHDKNQLKQLKVIPPLKTHLYVSLYCTLIKLYLNCKRF 302
++P LK L + D+ + K L L +Y +L TL KL + K
Sbjct: 639 IHPNLKTYQIFLDASSKHKRADAIFETHEKLLGYGIKLSRQVYNTLIATLCKLGMTKKAV 698
Query: 303 SEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNI 482
+ M+ G P+ ++N L++ Y + + YS M+ +G + PNV T N
Sbjct: 699 MVMED----MKERGFIPDTVTFNALMHGYFVGSHVRKALSTYSMMLDAG-ISPNVATYNT 753
Query: 483 LIHSLCKVGELKTALGFIRTVEI----VDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKG 650
+I LC G L+ ++ ++ +D +YN +I G K G ++++ EMI G
Sbjct: 754 IIRGLCDAGLLEEVEKWLNEMKSRGMRLDDFTYNALICGQAKMGNKKESMTIYCEMIADG 813
Query: 651 IQMDIFTCNNILNGFCRIG 707
+ T N +++ F ++G
Sbjct: 814 LVPKTGTYNVLISEFAQVG 832
Score = 60.8 bits (146), Expect = 4e-07
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Frame = +3
Query: 201 NQLKQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLL 380
NQ+ +++ P LKT Y + KR ET + G+K + Q +N L+
Sbjct: 632 NQMMFMEIHPNLKT------YQIFLDASSKHKRADAIFETHEKLLGYGIKLSRQVYNTLI 685
Query: 381 YKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEIV-- 554
G+ + +V +M G IP+ T N L+H ++ AL +
Sbjct: 686 ATLCKLGMTKKAVMVMEDMKERG-FIPDTVTFNALMHGYFVGSHVRKALSTYSMMLDAGI 744
Query: 555 --DTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
+ +YNTII G C G++E+ +L+EM +G+++D FT N ++ G ++G
Sbjct: 745 SPNVATYNTIIRGLCDAGLLEEVEKWLNEMKSRGMRLDDFTYNALICGQAKMG 797
>ref|XP_006289420.1| hypothetical protein CARUB_v10002919mg [Capsella rubella]
gi|482558126|gb|EOA22318.1| hypothetical protein
CARUB_v10002919mg [Capsella rubella]
Length = 938
Score = 153 bits (387), Expect = 5e-35
Identities = 74/161 (45%), Positives = 114/161 (70%), Gaps = 2/161 (1%)
Frame = +3
Query: 231 PLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLI- 407
P K +YVSL+CTL +LYL+C R A+ T M + G+ P+L+ WN +++ ++ +GL+
Sbjct: 51 PNKKRVYVSLFCTLFQLYLSCGRLYGAARTLSAMCNFGVVPDLRLWNSMIHHFSVNGLVH 110
Query: 408 SQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRT-VEIVDTVSYNTIIW 584
QV ++YS+MI G V P+V+ N+LIHSLCKVG+L+ A+ +R V VDT +YNT+I
Sbjct: 111 DQVSLIYSKMITCG-VSPDVFALNVLIHSLCKVGQLRFAISLLRNRVISVDTATYNTVIS 169
Query: 585 GFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
G C+ G+V++A FLSEM+KKG+ D + N +++GFC++G
Sbjct: 170 GLCEHGLVDEAYHFLSEMVKKGVMPDTVSYNTLIDGFCKVG 210
Score = 61.2 bits (147), Expect = 3e-07
Identities = 55/248 (22%), Positives = 113/248 (45%), Gaps = 15/248 (6%)
Frame = +3
Query: 9 CQSNN*QRMKSL-NQIKKLKLFTQFYSILTSKQLHSQHH---------LNPTLKIISPIL 158
C+ N R K+L ++ +L L T I + LH+ +P + +S I+
Sbjct: 207 CKVGNFARAKALVDEFSELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTLSSIV 266
Query: 159 PNVPICRNKDSHDKNQL-KQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMR 335
+C++ + L ++++ + H+ Y TL+ K + A + M
Sbjct: 267 KR--LCKDGKMMEAGLLLREMEEMGVYPNHV---TYTTLVDSLFKAKTYRHALALYSQMV 321
Query: 336 SNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGEL 515
G+ +L + L+ G + + + +M+L +PNV T L+ LCK G+L
Sbjct: 322 VRGIPVDLVVYTVLMDGLFKVGDLREAEKTF-KMLLEDNQVPNVVTYTALLDGLCKAGDL 380
Query: 516 KTALGFIRTV----EIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNI 683
+A I + + + V+Y+++I G+ K+GM+E+A+ + +M + + + FT +
Sbjct: 381 SSAEFIITQMLEKGVLPNVVTYSSMINGYVKKGMLEEAISLMRKMEDQNVVPNGFTYGTV 440
Query: 684 LNGFCRIG 707
++G + G
Sbjct: 441 IDGLFKAG 448
Score = 59.7 bits (143), Expect = 1e-06
Identities = 37/156 (23%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Frame = +3
Query: 267 TLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILS 446
+++K + EA M G+ PN ++ L+ + +YS+M++
Sbjct: 264 SIVKRLCKDGKMMEAGLLLREMEEMGVYPNHVTYTTLVDSLFKAKTYRHALALYSQMVVR 323
Query: 447 GEVIPNV-YTNNILIHSLCKVGEL----KTALGFIRTVEIVDTVSYNTIIWGFCKQGMVE 611
G + V YT +L+ L KVG+L KT + ++ + V+Y ++ G CK G +
Sbjct: 324 GIPVDLVVYT--VLMDGLFKVGDLREAEKTFKMLLEDNQVPNVVTYTALLDGLCKAGDLS 381
Query: 612 QAVVFLSEMIKKGIQMDIFTCNNILNGFCRIGLVDD 719
A +++M++KG+ ++ T ++++NG+ + G++++
Sbjct: 382 SAEFIITQMLEKGVLPNVVTYSSMINGYVKKGMLEE 417
Score = 58.5 bits (140), Expect = 2e-06
Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Frame = +3
Query: 306 EASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNIL 485
+A T+ VM G+ PN+ ++N ++ + +GL+ +V SEM G + P+ +T N L
Sbjct: 731 KALSTYSVMLEAGISPNVATYNTIIRGLSDAGLMKEVDKWLSEMKSRG-MRPDNFTYNAL 789
Query: 486 IHSLCKVGELKTALGF----IRTVEIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGI 653
I K+G K ++ I + +T +YN +I F G + QA + EM K+G+
Sbjct: 790 ISGQAKIGNKKESMTIYCEMIADGLVPNTSTYNVLISEFANVGKMLQARELMKEMGKRGV 849
Query: 654 QMDIFTCNNILNGFCRI 704
+ T +++G C++
Sbjct: 850 IPNTSTYCTMISGLCKL 866
Score = 58.2 bits (139), Expect = 3e-06
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Frame = +3
Query: 234 LKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQ 413
L +Y +L TL KL + K A+ M+ G P+ ++N L++ Y + +
Sbjct: 676 LTRQVYNTLVSTLCKLGMTKK----AATVMENMKERGFVPDTVTFNALMHGYFVGSHVGK 731
Query: 414 VWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEI----VDTVSYNTII 581
YS M+ +G + PNV T N +I L G +K ++ ++ D +YN +I
Sbjct: 732 ALSTYSVMLEAG-ISPNVATYNTIIRGLSDAGLMKEVDKWLSEMKSRGMRPDNFTYNALI 790
Query: 582 WGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
G K G ++++ EMI G+ + T N +++ F +G
Sbjct: 791 SGQAKIGNKKESMTIYCEMIADGLVPNTSTYNVLISEFANVG 832
>ref|XP_007029758.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao] gi|508718363|gb|EOY10260.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao]
Length = 1025
Score = 152 bits (383), Expect = 1e-34
Identities = 74/131 (56%), Positives = 95/131 (72%), Gaps = 3/131 (2%)
Frame = +3
Query: 330 MRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVG 509
MR +G+ P L WN L+Y +NASGL+S+V ++YSEMI G V+PNV+T N+L+HSL KVG
Sbjct: 1 MRKHGVIPVLPLWNHLIYSFNASGLVSEVMLLYSEMIACG-VLPNVFTINVLVHSLAKVG 59
Query: 510 ELKTALGFIRTV---EIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNN 680
L AL +R V VDTV+YNT+IWGFC+QG+ Q LSEM+KKGI D F+CN
Sbjct: 60 NLSFALELLRNVGNNNNVDTVTYNTLIWGFCEQGLAYQGFGLLSEMVKKGINFDTFSCNI 119
Query: 681 ILNGFCRIGLV 713
++ GFCRIG V
Sbjct: 120 VVKGFCRIGFV 130
Score = 65.1 bits (157), Expect = 2e-08
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 39/189 (20%)
Frame = +3
Query: 252 VSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYS 431
V +Y LI L ++ EA + MR L P+L + N ++ Y G ++
Sbjct: 556 VVVYNVLINGLLRLGKY-EAQSVYARMRELDLAPDLITCNTMINAYCKEGKFEYALNLWD 614
Query: 432 EMILSGEVIPNVYTNNILIHSLCKVGELKTAL---------GFIRTVEI----------- 551
+M G ++PN T NILI LC+ GE++ AL GF T I
Sbjct: 615 DMKSCG-LMPNSITCNILIRGLCRAGEIQKALNVLNEMLVLGFSPTTAIHKFLLDASSRN 673
Query: 552 -------------------VDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTC 674
++ +NT+I C+ GM ++A+ L++M +G D T
Sbjct: 674 GRADAILLMHECLVSMGLKLNQAVFNTLITVLCRLGMTKKAISALNDMTGRGFSADTITY 733
Query: 675 NNILNGFCR 701
N ++NG+CR
Sbjct: 734 NALINGYCR 742
Score = 60.5 bits (145), Expect = 6e-07
Identities = 35/133 (26%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Frame = +3
Query: 327 VMRSNGLKPNLQS--WNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLC 500
++R+ G N+ + +N L++ + GL Q + + SEM+ G + + ++ NI++ C
Sbjct: 67 LLRNVGNNNNVDTVTYNTLIWGFCEQGLAYQGFGLLSEMVKKG-INFDTFSCNIVVKGFC 125
Query: 501 KVGELKTALGFIRTVE----IVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIF 668
++G +K + + D + +N +I G+CK G + AV + M ++G+ DI
Sbjct: 126 RIGFVKYGEWVMDNLVNGGIFKDVIGFNILIDGYCKSGDMNYAVQIMDRMRREGLVPDII 185
Query: 669 TCNNILNGFCRIG 707
+ N +++GFC+ G
Sbjct: 186 SYNTLIDGFCKKG 198
Score = 60.1 bits (144), Expect = 7e-07
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Frame = +3
Query: 297 RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTN 476
+F+EA M M G+ PN S++ L+ + +G + + S+M++ G + +V
Sbjct: 291 KFAEAKVLLMEMEKMGVDPNHVSYSTLVDSFFKAGNSMDAFALQSQMVVRG-IAFDVVVY 349
Query: 477 NILIHSLCKVGELKTALGFIRTV----EIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIK 644
L+ L KVG+ K A T+ + + +Y +I G CK G + A L EM +
Sbjct: 350 TTLMDGLFKVGKPKEAENTFSTLLKHKLVPNLTTYAALIDGRCKSGDINGAESALKEMKE 409
Query: 645 KGIQMDIFTCNNILNGFCRIGLVDD 719
K + ++ T ++++N + R G++D+
Sbjct: 410 KNVVPNVVTYSSVINSYIRKGMLDE 434
Score = 59.3 bits (142), Expect = 1e-06
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Frame = +3
Query: 261 YCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMI 440
Y LI Y +A T+ M G+ PN+ ++N LL + +GL+ + ++S+M
Sbjct: 733 YNALINGYCRGSHIKKAFATYSHMLREGVPPNVVTYNLLLRGLSTAGLMKEADELFSQMK 792
Query: 441 LSGEVIPNVYTNNILIHSLCKVGE----LKTALGFIRTVEIVDTVSYNTIIWGFCKQGMV 608
G + PN T + LI K+G +K I + T +YN +I GF K G +
Sbjct: 793 EKG-LNPNASTYDTLISGHGKIGNKRESVKVYCEMISKGFVPRTGTYNLLISGFAKIGKM 851
Query: 609 EQAVVFLSEMIKKGIQMDIFTCNNILNGFCRI 704
QA L EM +G + T + +++G+C +
Sbjct: 852 SQARELLKEMQLRGALPNSSTYDILISGWCNL 883
Score = 57.0 bits (136), Expect = 6e-06
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Frame = +3
Query: 297 RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTN 476
R EA M S GL + ++ L+ + G S ++ EM + +V
Sbjct: 501 RMGEAEVLVKDMMSKGLSLDHVNYTSLMDGFFKEGKDSAALILAQEMT-EKNITFDVVVY 559
Query: 477 NILIHSLCKVGELKTALGFIRTVEI---VDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKK 647
N+LI+ L ++G+ + + R E+ D ++ NT+I +CK+G E A+ +M
Sbjct: 560 NVLINGLLRLGKYEAQSVYARMRELDLAPDLITCNTMINAYCKEGKFEYALNLWDDMKSC 619
Query: 648 GIQMDIFTCNNILNGFCRIG 707
G+ + TCN ++ G CR G
Sbjct: 620 GLMPNSITCNILIRGLCRAG 639
>ref|XP_004303063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 944
Score = 151 bits (382), Expect = 2e-34
Identities = 74/129 (57%), Positives = 98/129 (75%)
Frame = +3
Query: 330 MRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVG 509
MRS+GL P L WN+LL+ +N SGL SQV ++YSEM+ G V+PNV+T NI+IHSLCKVG
Sbjct: 1 MRSHGLVPGLPLWNRLLHHFNVSGLASQVSLLYSEMLSCG-VVPNVFTRNIMIHSLCKVG 59
Query: 510 ELKTALGFIRTVEIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILN 689
L AL +R +I DTVSYNT+IWGF +QG QA FLS+M+++ I +D +TCN ++N
Sbjct: 60 NLSLALHLLRNNQI-DTVSYNTLIWGFSQQGCPHQAFGFLSQMVQRAIYIDSYTCNLLVN 118
Query: 690 GFCRIGLVD 716
GFC +GLV+
Sbjct: 119 GFCGVGLVE 127
Score = 65.1 bits (157), Expect = 2e-08
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 6/154 (3%)
Frame = +3
Query: 261 YCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMI 440
Y LI+ Y A T M + G+ PN++++N LL + +GL+ + ++SEM
Sbjct: 728 YNALIRGYGISSHLKRAFATHSKMLAEGVSPNIETYNILLGVLSGAGLMKKADELFSEMK 787
Query: 441 LSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEIV------DTVSYNTIIWGFCKQG 602
G IPN T +IL+ K+G K A+ R E+V +T +YN +I F K G
Sbjct: 788 NRG-FIPNASTYDILVSGYGKIGNKKEAIR--RYCEMVSKGFVPNTGTYNVLISDFAKVG 844
Query: 603 MVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRI 704
+ QA ++EM +G + T + +++G+C++
Sbjct: 845 KMSQARELMNEMQGRGACPNSSTYSILISGWCKL 878
Score = 63.9 bits (154), Expect = 5e-08
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Frame = +3
Query: 273 IKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGE 452
I ++ CK S ++R+N + + S+N L++ ++ G Q + S+M+
Sbjct: 50 IMIHSLCK-VGNLSLALHLLRNNQI--DTVSYNTLIWGFSQQGCPHQAFGFLSQMVQRAI 106
Query: 453 VIPNVYTNNILIHSLCKVGELKTAL----GFIRTVEIVDTVSYNTIIWGFCKQGMVEQAV 620
I + YT N+L++ C VG ++ A F+ D V +NT+I +CK G V +A+
Sbjct: 107 YIDS-YTCNLLVNGFCGVGLVEYAEWVMDNFVGGGITRDVVGFNTLIAAYCKAGQVSRAL 165
Query: 621 VFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
+ +M + G+ D T N +++GFC +G
Sbjct: 166 ELIEKMERDGLVPDTVTYNALVHGFCNVG 194
Score = 57.8 bits (138), Expect = 4e-06
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Frame = +3
Query: 279 LYLNCK--RFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGE 452
+Y CK + SEA + G+ PN S+ ++ +G + V+ S+M++ G
Sbjct: 278 IYGLCKHGKLSEAKVLLKEIEKMGVNPNNVSYTTVVDSLFKAGSPREALVLQSQMVVRGL 337
Query: 453 VIPNVYTNNILIHSLCKVGELKTALGFIRTVE----IVDTVSYNTIIWGFCKQGMVEQAV 620
V V L+ L KVG+L + + + + ++Y+ +I G C G + A
Sbjct: 338 VFDLVIC-TALMAGLFKVGKLSEGKDLFQKISKLSLVPNCITYSALIDGHCNSGDMGSAE 396
Query: 621 VFLSEMIKKGIQMDIFTCNNILNGFCRIGLVDD 719
L EM KK + +I T ++++ G+ + G++DD
Sbjct: 397 AILREMEKKHVFPNIITYSSLIKGYMKKGMIDD 429
>sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14770, mitochondrial; Flags: Precursor
Length = 940
Score = 150 bits (379), Expect = 4e-34
Identities = 73/163 (44%), Positives = 113/163 (69%), Gaps = 2/163 (1%)
Frame = +3
Query: 225 IPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGL 404
+ P+KT +YVSL+ TL +LYL+C+R A+ T M + G+ P+ + WN L++++N +GL
Sbjct: 51 LAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGL 110
Query: 405 I-SQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRT-VEIVDTVSYNTI 578
+ QV ++YS+MI G V P+V+ N+LIHS CKVG L A+ +R V +DTV+YNT+
Sbjct: 111 VHDQVSLIYSKMIACG-VSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTV 169
Query: 579 IWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
I G C+ G+ ++A FLSEM+K GI D + N +++GFC++G
Sbjct: 170 ISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG 212
Score = 62.4 bits (150), Expect = 1e-07
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Frame = +3
Query: 306 EASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNIL 485
+A T+ VM G+ PN+ ++N ++ + +GLI +V SEM G + P+ +T N L
Sbjct: 733 KALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG-MRPDDFTYNAL 791
Query: 486 IHSLCKVGELKTALGF----IRTVEIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGI 653
I K+G +K ++ I + T +YN +I F G + QA L EM K+G+
Sbjct: 792 ISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 851
Query: 654 QMDIFTCNNILNGFCRI 704
+ T +++G C++
Sbjct: 852 SPNTSTYCTMISGLCKL 868
Score = 61.2 bits (147), Expect = 3e-07
Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 15/248 (6%)
Frame = +3
Query: 9 CQSNN*QRMKSL-NQIKKLKLFTQFYSILTSKQLHSQHH---------LNPTLKIISPIL 158
C+ N R K+L ++I +L L T + + LH+ +P + S I+
Sbjct: 209 CKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSII 268
Query: 159 PNVPICRN-KDSHDKNQLKQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMR 335
+C+ K L++++ + H+ Y TL+ + A + M
Sbjct: 269 NR--LCKGGKVLEGGLLLREMEEMSVYPNHV---TYTTLVDSLFKANIYRHALALYSQMV 323
Query: 336 SNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGEL 515
G+ +L + L+ +G + + + +M+L +PNV T L+ LCK G+L
Sbjct: 324 VRGIPVDLVVYTVLMDGLFKAGDLREAEKTF-KMLLEDNQVPNVVTYTALVDGLCKAGDL 382
Query: 516 KTALGFIRTV----EIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNI 683
+A I + I + V+Y+++I G+ K+GM+E+AV L +M + + + FT +
Sbjct: 383 SSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTV 442
Query: 684 LNGFCRIG 707
++G + G
Sbjct: 443 IDGLFKAG 450
Score = 59.3 bits (142), Expect = 1e-06
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Frame = +3
Query: 192 HDKNQLKQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWN 371
H NQ+ +++ P L T Y + KR +T + S G+K + Q +N
Sbjct: 631 HILNQMMLMEIHPNLTT------YRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYN 684
Query: 372 QLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEI 551
L+ G+ + +V +M G IP+ T N L+H ++ AL +
Sbjct: 685 TLIATLCKLGMTKKAAMVMGDMEARG-FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 743
Query: 552 V----DTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
+ +YNTII G G++++ +LSEM +G++ D FT N +++G +IG
Sbjct: 744 AGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 799
>ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis
thaliana] gi|332004692|gb|AED92075.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 938
Score = 150 bits (379), Expect = 4e-34
Identities = 73/163 (44%), Positives = 113/163 (69%), Gaps = 2/163 (1%)
Frame = +3
Query: 225 IPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGL 404
+ P+KT +YVSL+ TL +LYL+C+R A+ T M + G+ P+ + WN L++++N +GL
Sbjct: 49 LAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGL 108
Query: 405 I-SQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRT-VEIVDTVSYNTI 578
+ QV ++YS+MI G V P+V+ N+LIHS CKVG L A+ +R V +DTV+YNT+
Sbjct: 109 VHDQVSLIYSKMIACG-VSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTV 167
Query: 579 IWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
I G C+ G+ ++A FLSEM+K GI D + N +++GFC++G
Sbjct: 168 ISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG 210
Score = 62.4 bits (150), Expect = 1e-07
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Frame = +3
Query: 306 EASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNIL 485
+A T+ VM G+ PN+ ++N ++ + +GLI +V SEM G + P+ +T N L
Sbjct: 731 KALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG-MRPDDFTYNAL 789
Query: 486 IHSLCKVGELKTALGF----IRTVEIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGI 653
I K+G +K ++ I + T +YN +I F G + QA L EM K+G+
Sbjct: 790 ISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Query: 654 QMDIFTCNNILNGFCRI 704
+ T +++G C++
Sbjct: 850 SPNTSTYCTMISGLCKL 866
Score = 61.2 bits (147), Expect = 3e-07
Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 15/248 (6%)
Frame = +3
Query: 9 CQSNN*QRMKSL-NQIKKLKLFTQFYSILTSKQLHSQHH---------LNPTLKIISPIL 158
C+ N R K+L ++I +L L T + + LH+ +P + S I+
Sbjct: 207 CKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSII 266
Query: 159 PNVPICRN-KDSHDKNQLKQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMR 335
+C+ K L++++ + H+ Y TL+ + A + M
Sbjct: 267 NR--LCKGGKVLEGGLLLREMEEMSVYPNHV---TYTTLVDSLFKANIYRHALALYSQMV 321
Query: 336 SNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGEL 515
G+ +L + L+ +G + + + +M+L +PNV T L+ LCK G+L
Sbjct: 322 VRGIPVDLVVYTVLMDGLFKAGDLREAEKTF-KMLLEDNQVPNVVTYTALVDGLCKAGDL 380
Query: 516 KTALGFIRTV----EIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNI 683
+A I + I + V+Y+++I G+ K+GM+E+AV L +M + + + FT +
Sbjct: 381 SSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTV 440
Query: 684 LNGFCRIG 707
++G + G
Sbjct: 441 IDGLFKAG 448
Score = 59.3 bits (142), Expect = 1e-06
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Frame = +3
Query: 192 HDKNQLKQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWN 371
H NQ+ +++ P L T Y + KR +T + S G+K + Q +N
Sbjct: 629 HILNQMMLMEIHPNLTT------YRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYN 682
Query: 372 QLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEI 551
L+ G+ + +V +M G IP+ T N L+H ++ AL +
Sbjct: 683 TLIATLCKLGMTKKAAMVMGDMEARG-FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 552 V----DTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
+ +YNTII G G++++ +LSEM +G++ D FT N +++G +IG
Sbjct: 742 AGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
>ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297319528|gb|EFH49950.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 938
Score = 148 bits (374), Expect = 2e-33
Identities = 76/159 (47%), Positives = 111/159 (69%), Gaps = 2/159 (1%)
Frame = +3
Query: 237 KTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLI-SQ 413
KT +YVSL+ TL +LYL+C R A+ T M + G+ P+L WN L++++N +GL+ Q
Sbjct: 53 KTRVYVSLFHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQ 112
Query: 414 VWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRT-VEIVDTVSYNTIIWGF 590
V +VYS+MI G V P+V+ N+LIHSLCKVG+L A+ +R V VDTV+YNT+I G
Sbjct: 113 VSLVYSKMIACG-VSPDVFALNVLIHSLCKVGQLSFAISLLRNRVISVDTVTYNTVISGL 171
Query: 591 CKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
C+ G+ ++A FLSEM+K GI D + N +++GFC++G
Sbjct: 172 CEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVG 210
Score = 63.2 bits (152), Expect = 9e-08
Identities = 58/248 (23%), Positives = 113/248 (45%), Gaps = 15/248 (6%)
Frame = +3
Query: 9 CQSNN*QRMKSL-NQIKKLKLFTQFYSILTSKQLHSQHH---------LNPTLKIISPIL 158
C+ N R K+L ++I +L L T I + LH+ +P + S I+
Sbjct: 207 CKVGNFARAKALVDEISELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSII 266
Query: 159 PNVPICRN-KDSHDKNQLKQLKVIPPLKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMR 335
+C++ K L++++ + H+ Y TL+ K + A + M
Sbjct: 267 NR--LCKDGKVMEGGLLLREMEEMGVYPNHV---TYTTLVDSLFKAKDYRHALALYSQMV 321
Query: 336 SNGLKPNLQSWNQLLYKYNASGLISQVWVVYSEMILSGEVIPNVYTNNILIHSLCKVGEL 515
G+ +L + L+ +G + + + +M+L +PNV T L+ LCK G+L
Sbjct: 322 VRGIPVDLVVYTVLMAGLFKAGDLREAEKTF-KMLLEDNEVPNVVTYTALVDGLCKAGDL 380
Query: 516 KTALGFIRTV----EIVDTVSYNTIIWGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNI 683
+A I + + V+Y+++I G+ K+GM+E+AV + +M + + + FT +
Sbjct: 381 SSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTV 440
Query: 684 LNGFCRIG 707
++G + G
Sbjct: 441 IDGLFKAG 448
Score = 58.5 bits (140), Expect = 2e-06
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Frame = +3
Query: 234 LKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQ 413
++ H ++ Y + + KR +T + S G+K + Q +N L+ G+ +
Sbjct: 637 MEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRK 696
Query: 414 VWVVYSEMILSGEVIPNVYTNNILIHSL---CKVGELKTALGFIRTVEIVDTVS-YNTII 581
+V +M G +P+ T N L+H VG+ + + I V+ YNTII
Sbjct: 697 AAMVMEDMEARG-FVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTII 755
Query: 582 WGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
G G++++ +LSEM +G++ D FT N +++G +IG
Sbjct: 756 RGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
Score = 57.8 bits (138), Expect = 4e-06
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Frame = +3
Query: 234 LKTHLYVSLYCTLIKLYLNCKRFSEASETFMVMRSNGLKPNLQSWNQLLYKYNASGLISQ 413
L +Y +L TL KL + K A+ M + G P+ ++N L++ Y + +
Sbjct: 676 LSRQVYNTLIATLCKLGMTRK----AAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGK 731
Query: 414 VWVVYSEMILSGEVIPNVYTNNILIHSLCKVGELKTALGFIRTVEI----VDTVSYNTII 581
YS M+ +G + PNV T N +I L G +K ++ ++ D +YN +I
Sbjct: 732 ALSTYSMMMEAG-ISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALI 790
Query: 582 WGFCKQGMVEQAVVFLSEMIKKGIQMDIFTCNNILNGFCRIG 707
G K G ++++ EMI G+ T N +++ F ++G
Sbjct: 791 SGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVG 832