BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00043081
         (1339 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003587231.1| ribosomal protein S3 [Citrullus lanatus] gi|...   403   e-110
ref|YP_003587365.1| ribosomal protein S3 [Cucurbita pepo] gi|259...   402   e-109
dbj|BAD83474.2| ribosomal protein S3 (mitochondrion) [Nicotiana ...   392   e-106
ref|YP_002608370.1| ribosomal protein S3 [Vitis vinifera] gi|209...   391   e-106
ref|YP_008802511.1| ribosomal protein S3 (mitochondrion) [Asclep...   387   e-105
emb|CBJ23369.1| ribosomal protein S3 [Beta vulgaris subsp. marit...   386   e-104
ref|YP_173410.1| ribosomal protein S3 [Nicotiana tabacum]             386   e-104
ref|YP_005090476.1| ribosomal protein S3 (mitochondrion) [Lotus ...   385   e-104
sp|P27754.2|RT03_OENBE RecName: Full=Ribosomal protein S3, mitoc...   382   e-103
dbj|BAD66747.1| ribosomal protein S3 [Beta vulgaris subsp. vulga...   382   e-103
ref|YP_007516919.1| ribosomal protein S3 (mitochondrion) [Glycin...   382   e-103
ref|YP_004222316.1| ribosomal protein S3 [Beta vulgaris subsp. m...   381   e-103
ref|NP_064078.2| rps3 gene product (mitochondrion) [Beta vulgari...   380   e-103
sp|Q04716.1|RT03_PETHY RecName: Full=Ribosomal protein S3, mitoc...   379   e-102
ref|YP_005090455.1| ribosomal protein S3 (mitochondrion) [Millet...   378   e-102
emb|CBL51993.1| ribosomal protein S3 (mitochondrion) [Beta vulga...   377   e-102
ref|YP_004222806.1| ribosomal protein S3 [Vigna radiata] gi|3082...   377   e-102
ref|YP_004237268.1| ribosomal protein S3 (mitochondrion) [Ricinu...   376   e-101
ref|YP_006666137.1| ribosomal protein S3 (mitochondrion) [Malus ...   374   e-101
ref|YP_002608205.2| ribosomal protein S3 [Carica papaya] gi|2911...   374   e-101

>ref|YP_003587231.1| ribosomal protein S3 [Citrullus lanatus] gi|259156790|gb|ACV96652.1|
            ribosomal protein S3 [Citrullus lanatus]
          Length = 563

 Score =  403 bits (1036), Expect = e-110
 Identities = 238/413 (57%), Positives = 288/413 (69%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWFSDYYYGKL+YQDV+LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKV------KSIEHSDTEGN 584
            +I HFPK T +H FLP RP+ L R+  S     KG+WWAFGKV       S + ++ E N
Sbjct: 61   IILHFPKRTFIHFFLPRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHSSDDTEEERN 120

Query: 585  EV--RDAGKRVKSVAANNQKKKLG--------------------QSNPLRELRVSGAL-G 695
            EV  R+A KRV+S+  ++++K+                      + N  + LRVSGA   
Sbjct: 121  EVRGREAEKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFKH 180

Query: 696  PK-AG--NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVM 848
            PK AG  ND+AFL   DDSF+KT+ FKFFFP KS S G   +LL+R +PAVRPSLNYLVM
Sbjct: 181  PKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYLVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVEG--SEGGRLDQRIRSRIAFLVEN--SS 1016
              LLN KNKMHFDPV+ LNHFVA G+AEP+T+ G  ++G  LD+RIRSRIAF VE+  S 
Sbjct: 241  QYLLNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESLTSE 300

Query: 1017 SKSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRDGV--YKKHLIEDTR 1184
             K L+E K  LTHFI QANDLRFAGT K +ISL           RDGV  YK    EDTR
Sbjct: 301  KKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDTR 360

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            EQ LGQLR KCWNL+GK+  ++LI+K ++ G +GEL+KG+EMM EIILRNRRI
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRI 413


>ref|YP_003587365.1| ribosomal protein S3 [Cucurbita pepo] gi|259156834|gb|ACV96695.1|
            ribosomal protein S3 [Cucurbita pepo]
          Length = 565

 Score =  402 bits (1033), Expect = e-109
 Identities = 237/415 (57%), Positives = 288/415 (69%), Gaps = 55/415 (13%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWFSDYYYGKL+YQDV+LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTSK-----GQWWAFGKV------KSIEHSDTEGN 584
            +I HFPK+T +H FLP RP+ L R++ SK     G+WWAFGKV       S + ++ E N
Sbjct: 61   IILHFPKITFIHFFLPRRPRGLKRRAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN 120

Query: 585  EV--RDAGKRVKSVAANNQKKKLGQ---------------------SNPLRELRVSGAL- 692
            +V  R+A KRV+S+   + ++K  +                      N  + LRVSGA  
Sbjct: 121  KVRGREAEKRVESMIRLDDREKQNEIRIWPKKKQDYGYHDRSPSRKKNLSKLLRVSGAFK 180

Query: 693  GPK-AG--NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLV 845
             PK AG  ND+AFL   DDSF+KT+ FKFFFP++S S G   +LL+R +PAVRPSLNYLV
Sbjct: 181  HPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTLPAVRPSLNYLV 240

Query: 846  MHDLLNAKNKMHFDPVMALNHFVARGLAEPATVEG--SEGGRLDQRIRSRIAFLVEN--S 1013
            M  LLN KNKMHFDPV  LNHFVA G+AEP+T+ G  ++G  LD+RIRSRIAF VE+  S
Sbjct: 241  MQYLLNTKNKMHFDPVGVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESLTS 300

Query: 1014 SSKSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRDGV--YKKHLIEDT 1181
              K L+E K  LTHFI QANDLRFAGT K +ISL           RDGV  YK    EDT
Sbjct: 301  EKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDT 360

Query: 1182 REQFLGQLRTKCWNLLGKE---VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            REQ LGQLR KCWNL+GKE   ++LI+K ++ G +GEL+KG+EMM EIILRNRRI
Sbjct: 361  REQLLGQLRIKCWNLMGKEDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRI 415


>dbj|BAD83474.2| ribosomal protein S3 (mitochondrion) [Nicotiana tabacum]
          Length = 563

 Score =  392 bits (1007), Expect = e-106
 Identities = 236/413 (57%), Positives = 285/413 (69%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWFSDYYYGKLVYQDV+LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKV------KSIEHSDTEGN 584
            +I HFPK T +H FLP RP+ L R+  S     KG+W AFGKV       S + ++ E N
Sbjct: 61   IIIHFPKRTFIHFFLPRRPRRLKRREKSRPVKEKGRWGAFGKVGPIGCLHSSDGTEEERN 120

Query: 585  EV--RDAGKRVKSVAANNQ----------KKKLG----------QSNPLRELRVSGAL-G 695
            EV  R AGKRV+S+  +++          KKK G          + N  + LRVSGA   
Sbjct: 121  EVRGRGAGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKLLRVSGAFKH 180

Query: 696  PK-AG--NDVAFL--RDDSFKKTECFKFFFPDKSSS---YGNLLQR-VPAVRPSLNYLVM 848
            PK AG  ND+AFL   DDSF+KT  FKFFFP KS S     +LL+R +PAVRPSLNYLVM
Sbjct: 181  PKYAGIENDIAFLIENDDSFRKTNLFKFFFPKKSRSDRPTSHLLKRTLPAVRPSLNYLVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVEG--SEGGRLDQRIRSRIAFLVENSSS- 1019
              LLN KNK+HFDPV+ LNHFVA G+AEP+T+ G  ++G  LD+RIRS IAF VE+S+S 
Sbjct: 241  QYLLNTKNKIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSCIAFFVESSTSE 300

Query: 1020 -KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRD--GVYKKHLIEDTR 1184
             K L+E K  +THFI QANDLRFAGT K +ISL          LRD  GVY     ED R
Sbjct: 301  KKCLAEAKKRVTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDGVGVYNNLFFEDAR 360

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            EQ LGQLR KCWNL+GK+  ++LI+K ++   +GEL++G+EMM EIILRNRRI
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMELIEKFIDLNRIGELIRGIEMMIEIILRNRRI 413


>ref|YP_002608370.1| ribosomal protein S3 [Vitis vinifera] gi|209954167|emb|CAQ77614.1|
            ribosomal protein S3 [Vitis vinifera]
            gi|239764764|gb|ACS15233.1| ribosomal protein S3 [Vitis
            vinifera]
          Length = 563

 Score =  391 bits (1005), Expect = e-106
 Identities = 232/413 (56%), Positives = 283/413 (68%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWFSDYYYGK VYQDV+LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKV------KSIEHSDTEGN 584
            +I HFPK T +H FLP RP+ L R+  S     KG+WWAFGKV       S + ++ E N
Sbjct: 61   IILHFPKRTFIHFFLPRRPRGLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSDGTEEERN 120

Query: 585  EV--RDAGKRVKSVAANNQKKKLG--------------------QSNPLRELRVSGALG- 695
            EV  R AGKRV+S+  ++++K+                      + N  + LRVSGA   
Sbjct: 121  EVRGRGAGKRVESIRLDDREKQNERRIWPKKKQRYGYHDQSPSIKKNLSKLLRVSGAFKH 180

Query: 696  -PKAG--NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVM 848
               AG  ND+AFL   DDSF+KT+ FKFFFP KS S G   ++L+R +PAVRPSLNY VM
Sbjct: 181  LKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHILKRTLPAVRPSLNYSVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVEG--SEGGRLDQRIRSRIAFLVENSSS- 1019
              LLN KN++HFD V+ LNHFVA G+AEP+T+ G  ++G  LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNTKNQIHFDSVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTSE 300

Query: 1020 -KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRD--GVYKKHLIEDTR 1184
             K L+E K  LTHFI QANDLRFAGT K +ISL           RD  GVY     ED R
Sbjct: 301  KKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAR 360

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            EQ LGQLR KCWNL+GK+  ++LIDK ++ G +GEL+KG+EMM EIILRNRRI
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMELIDKFIDLGGIGELIKGIEMMIEIILRNRRI 413


>ref|YP_008802511.1| ribosomal protein S3 (mitochondrion) [Asclepias syriaca]
            gi|556562349|gb|AGZ63045.1| ribosomal protein S3
            (mitochondrion) [Asclepias syriaca]
          Length = 555

 Score =  387 bits (995), Expect = e-105
 Identities = 230/407 (56%), Positives = 277/407 (68%), Gaps = 47/407 (11%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWFSDYYYGKLVYQDV+LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS---KGQWWAFGKVKSI------EHSDTEGNEV 590
            +I HFPK T +H FLP RP+ L R+  S   K +WWAFGKV  I      + ++ E  EV
Sbjct: 61   IILHFPKRTFIHFFLPRRPRRLKRRDKSRPRKARWWAFGKVGPIGCLHSKDGTEEERKEV 120

Query: 591  --RDAGKRVKSVAANNQ--------KKKLG----------QSNPLRELRVSGAL-GPK-A 704
              R AGKRV S+  +++        KKK G          + N  + LRVSGA   PK A
Sbjct: 121  RGRGAGKRVDSIRLDDRENERRIWPKKKQGYAYHDRSPSIKKNISKLLRVSGAFKHPKYA 180

Query: 705  G--NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVMHDLL 860
            G  ND+AFL   DDSF+KT+ FKFFFP KS   G   +LL++ +PAVRPS NYLVM  LL
Sbjct: 181  GVVNDIAFLIENDDSFRKTKLFKFFFPKKSRFNGPTSHLLKKTLPAVRPSFNYLVMQYLL 240

Query: 861  NAKNKMHFDPVMALNHFVARGLAEPATV--EGSEGGRLDQRIRSRIAFLVEN--SSSKSL 1028
            N KNK+HFDPV+ LNHFVA G+AEP+T+    ++   LD+RIRSRIAF VE+  S  KSL
Sbjct: 241  NTKNKIHFDPVVVLNHFVAPGVAEPSTMGRANAQERSLDKRIRSRIAFFVESLTSEKKSL 300

Query: 1029 SEDKLTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRD--GVYKKHLIEDTREQFLGQ 1202
            +E KLTHFI QANDLRFAGT K + SL          LRD  GVY     ED REQ LG+
Sbjct: 301  AEAKLTHFIRQANDLRFAGTTKTTTSLFPFFGATFFFLRDGVGVYNNLFFEDAREQLLGK 360

Query: 1203 LRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
             R KCWNL+ K   ++LI+K ++ G +GEL+KG+EMM EIILR RRI
Sbjct: 361  SRIKCWNLMSKAKVMELIEKFIDLGRIGELIKGIEMMIEIILRKRRI 407


>emb|CBJ23369.1| ribosomal protein S3 [Beta vulgaris subsp. maritima]
          Length = 551

 Score =  386 bits (992), Expect = e-104
 Identities = 230/413 (55%), Positives = 277/413 (67%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWF+DYYYGKLVYQD++LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFNDYYYGKLVYQDINLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEGN 584
            +I HF K T ++ FLP RP+   R+  S     KG+WW  GKV  I      E    E N
Sbjct: 61   IIIHFQKRTFINFFLPRRPQRRKRRKKSRPGKTKGRWWELGKVGPIECLYSSEGRKEERN 120

Query: 585  EVRD--AGKRVKSVAANNQKKKLG--------------------QSNPLRELRVSGAL-G 695
            EVRD  AGKRV+S+  ++QKK+                      + N  + LRVSGA   
Sbjct: 121  EVRDRRAGKRVESIRLDDQKKQNEIRVWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFKH 180

Query: 696  PKAG---NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVM 848
            PK     ND+AFL   D SFKKT+ FKFFFP KS   G   +LL+R +PAVRPSLNYLVM
Sbjct: 181  PKYAEVVNDIAFLIENDSSFKKTKLFKFFFPKKSRYDGPTSHLLKRTLPAVRPSLNYLVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVE--GSEGGRLDQRIRSRIAFLVENSSS- 1019
              LLN K KMHFDPV+ LNHFVA G+ EP+T+    ++GG LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNTKKKMHFDPVLVLNHFVAPGVVEPSTMNRANAQGGSLDKRIRSRIAFFVESSTSQ 300

Query: 1020 -KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRDG--VYKKHLIEDTR 1184
             K L+E K  LTHFI QANDLRFAG RK +ISL          LRDG  VY     +D R
Sbjct: 301  KKCLAEAKKRLTHFIRQANDLRFAGRRKTTISLFPFFGATFFFLRDGVRVYNNLFFKDAR 360

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            EQ LGQLR KCWNL+GK+  +KLI+K ++ G + EL+KG+EMM EIIL+NRRI
Sbjct: 361  EQLLGQLRRKCWNLMGKDKVMKLIEKFIDLGGIRELIKGIEMMIEIILKNRRI 413


>ref|YP_173410.1| ribosomal protein S3 [Nicotiana tabacum]
          Length = 563

 Score =  386 bits (991), Expect = e-104
 Identities = 233/413 (56%), Positives = 282/413 (68%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWFSDYYYGK VYQDV+LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKV------KSIEHSDTEGN 584
            +I HFPK T +H FLP RP+ L R+  S     KG+W AFGKV       S + ++ E N
Sbjct: 61   IIIHFPKRTFIHFFLPRRPRRLKRREKSRPVKEKGRWGAFGKVGPIGCLHSSDGTEEERN 120

Query: 585  EV--RDAGKRVKSVAANNQ----------KKKLG----------QSNPLRELRVSGAL-G 695
            EV  R AGKRV+S+  +++          KKK G          + N  + LRVSGA   
Sbjct: 121  EVRGRGAGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 696  PK-AG--NDVAFL--RDDSFKKTECFKFFFPDKSSS---YGNLLQR-VPAVRPSLNYLVM 848
            PK AG  ND+AFL   DDSF+KT  FKFFFP KS S     +LL+R +PAVRPSLNY VM
Sbjct: 181  PKYAGIENDIAFLIENDDSFRKTNLFKFFFPKKSRSDRPTSHLLKRTLPAVRPSLNYSVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVEG--SEGGRLDQRIRSRIAFLVENSSS- 1019
              LLN KNK+HFDPV+ LNHFVA G+AEP+T+ G  ++G  LD+RIRS IAF VE+S+S 
Sbjct: 241  QYLLNTKNKIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSCIAFFVESSTSE 300

Query: 1020 -KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRD--GVYKKHLIEDTR 1184
             K L+E K  +THFI QANDLRFAGT K +ISL           RD  GVY     ED R
Sbjct: 301  KKCLAEAKKRVTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAR 360

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            EQ LGQLR KCWNL+GK+  ++LI+K ++   +GEL++G+EMM EIILRNRRI
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMELIEKFIDLNRIGELIRGIEMMIEIILRNRRI 413


>ref|YP_005090476.1| ribosomal protein S3 (mitochondrion) [Lotus japonicus]
            gi|357197340|gb|AET62936.1| ribosomal protein S3
            (mitochondrion) [Lotus japonicus]
          Length = 563

 Score =  385 bits (989), Expect = e-104
 Identities = 227/413 (54%), Positives = 281/413 (68%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWFSDYYY KLVYQDV+LRSY GSIRPP + TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYCKLVYQDVNLRSYFGSIRPPARLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKV------KSIEHSDTEGN 584
            ++ +FPK T +H FLP RP+ L R+  S     KG+WWAFGKV       S ++++ E N
Sbjct: 61   ILINFPKRTFIHFFLPRRPRRLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSDNTEEERN 120

Query: 585  EVRD--AGKRVKSVAANNQKKKLG--------------------QSNPLRELRVSGAL-G 695
            EVR   AGKRV+S+  ++++K+                      + N  + LRV GA   
Sbjct: 121  EVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKLLRVGGAFKH 180

Query: 696  PK---AGNDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVM 848
            PK   A ND+AFL   DDSF+KT+ FKFFFP KS S G   +L +R +PAVRPSLNYLVM
Sbjct: 181  PKYAGAVNDIAFLIENDDSFRKTKFFKFFFPKKSRSNGPTSHLFKRTLPAVRPSLNYLVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVEG--SEGGRLDQRIRSRIAFLVENSSS- 1019
              LLN KN++HFDPV+ LNHFVA G+AEP+T+ G  ++G  LD RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNRKNQIHFDPVVVLNHFVAPGVAEPSTMRGANAQGRSLDNRIRSRIAFFVESSTSE 300

Query: 1020 -KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRD--GVYKKHLIEDTR 1184
             K L+E K  LTHFI  ANDLRFAGT K +ISL          LRD  G+Y     ED R
Sbjct: 301  KKCLAEAKKRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFLRDRVGIYNHLFFEDAR 360

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            E  LGQLR KCWNL+GK+  ++LI+K ++ G +GE +KG+EMM EIILRNRRI
Sbjct: 361  EPLLGQLRIKCWNLMGKDKVMELIEKFIDLGRIGEWIKGIEMMIEIILRNRRI 413


>sp|P27754.2|RT03_OENBE RecName: Full=Ribosomal protein S3, mitochondrial
            gi|632234|pir||S43767 ribosomal protein S3 - evening
            primrose mitochondrion gi|13191|emb|CAA48894.1| ribosomal
            protein S3 [Oenothera berteroana]
          Length = 550

 Score =  382 bits (982), Expect = e-103
 Identities = 231/413 (55%), Positives = 279/413 (67%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWFSDYYYGK VYQDV+LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEGN 584
            +I HFPK T +H FLP RP+ L R   S     K +WW FGKV  I      + ++ E N
Sbjct: 61   IILHFPKRTFIHFFLPRRPRRLKRGKKSRPGKEKARWWEFGKVGPIGCLHSNDDTEEERN 120

Query: 585  EV--RDAGKRVKSVAANNQ----------KKKLG----------QSNPLRELRVSGAL-G 695
            EV  R AGKRV+S+  +++          KKK G          + N  + LRVSGA   
Sbjct: 121  EVGGRGAGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 696  PK-AG--NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQRV-PAVRPSLNYLVM 848
            PK AG  ND+AFL   DDSF+KT+ FKFFFP KS S G   +LL+R  PAVRPSLNY VM
Sbjct: 181  PKYAGVLNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTPPAVRPSLNYSVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVEGS--EGGRLDQRIRSRIAFLVENSSS- 1019
               LN KN+MHFDP++ LNHFVA G+AEP+T+ G+  +G   + RIRSRIAF VE+S+S 
Sbjct: 241  QYYLNTKNQMHFDPLVVLNHFVAPGVAEPSTMGGANRQGRSNELRIRSRIAFFVESSTSE 300

Query: 1020 -KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRD--GVYKKHLIEDTR 1184
             KSL+EDK  L HFI Q NDLRFAG  K +ISL           RD  GVYK    ED R
Sbjct: 301  KKSLAEDKKGLPHFIRQENDLRFAGRTKTTISLFPFFGATFFFPRDGVGVYKHLFFEDAR 360

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            EQ LGQLR KCW L+GK+  ++LI+K ++ G +GEL+KG+E+M EIILRNRRI
Sbjct: 361  EQLLGQLRIKCWKLMGKDKVMELIEKFIDLGGIGELIKGIEIMIEIILRNRRI 413


>dbj|BAD66747.1| ribosomal protein S3 [Beta vulgaris subsp. vulgaris]
            gi|54606764|dbj|BAD66787.1| ribosomal protein S3 [Beta
            vulgaris subsp. vulgaris]
          Length = 551

 Score =  382 bits (982), Expect = e-103
 Identities = 228/413 (55%), Positives = 275/413 (66%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWF+DYYYGKLVYQD++LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFNDYYYGKLVYQDINLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEGN 584
            +I HF K T ++ FLP RP+   R+  S     KG+WW  GKV  I      E    E N
Sbjct: 61   IIIHFQKRTFINFFLPRRPQRRKRRKKSRPGKTKGRWWELGKVGPIECLYSSEGRKEERN 120

Query: 585  EVRD--AGKRVKSVAANNQKKKLG--------------------QSNPLRELRVSGAL-G 695
            EVRD  AGKRV+S+  ++QKK+                      + N  + LRVSGA   
Sbjct: 121  EVRDRRAGKRVESIRLDDQKKQNEIRVWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 696  PKAG---NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVM 848
            PK     ND+AFL   D SFKKT+ FKFFFP KS   G   +LL+R +PAVRPSLNY VM
Sbjct: 181  PKYAEVVNDIAFLIENDSSFKKTKLFKFFFPKKSRYDGPTSHLLKRTLPAVRPSLNYSVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVE--GSEGGRLDQRIRSRIAFLVENSSS- 1019
              LLN K KMHFDPV+ LNHFVA G+ EP+T+    ++GG LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNTKKKMHFDPVLVLNHFVAPGVVEPSTMNRANAQGGSLDKRIRSRIAFFVESSTSQ 300

Query: 1020 -KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRDG--VYKKHLIEDTR 1184
             K L+E K  LTHFI QANDLRFAG RK +ISL           RDG  VY     +D R
Sbjct: 301  KKCLAEAKKRLTHFIRQANDLRFAGRRKTTISLFPFFGATFFFPRDGVRVYNNLFFKDAR 360

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            EQ LGQLR KCWNL+GK+  +KLI+K ++ G + EL+KG+EMM EIIL+NRRI
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMKLIEKFIDLGGIRELIKGIEMMIEIILKNRRI 413


>ref|YP_007516919.1| ribosomal protein S3 (mitochondrion) [Glycine max]
            gi|403311576|gb|AFR34324.1| ribosomal protein S3
            (mitochondrion) [Glycine max]
          Length = 562

 Score =  382 bits (981), Expect = e-103
 Identities = 230/412 (55%), Positives = 280/412 (67%), Gaps = 52/412 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSS FSDYYYGKLVYQDV+LRSY GSIRPP + TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSRFSDYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKV------KSIEHSDTEGN 584
            ++ HFPK T +H FLP RP+ L R+  S     KG+WWAFGKV       S ++++ E N
Sbjct: 61   ILIHFPKRTFIHFFLPRRPRRLKRRKKSRPGKEKGRWWAFGKVGPIGCLHSSDNTEEERN 120

Query: 585  EVRD--AGKRVKSVAANNQKKKLG--------------------QSNPLRELRVSGAL-G 695
            EVR   AGKRV+S+  ++++K+                      + N  + LRVSGA   
Sbjct: 121  EVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 696  PK-AG--NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVM 848
            PK AG  ND+AFL   DDSFKK + FK FFP KS S G   +L +R +PAVRPSLNY VM
Sbjct: 181  PKYAGVVNDIAFLIENDDSFKKRKLFKLFFPKKSRSDGPTSHLFKRTLPAVRPSLNYSVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVEGSEGGR-LDQRIRSRIAFLVENSSS-- 1019
              LLN KN+MHFDPV+ LNHFVA G+AEP+T+ G++ GR LD+RIRSRIAF VE+S+S  
Sbjct: 241  QYLLNRKNQMHFDPVVVLNHFVAPGVAEPSTMGGAKQGRGLDKRIRSRIAFFVESSTSEK 300

Query: 1020 KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRD--GVYKKHLIEDTRE 1187
            K L+E K  LTHFI  ANDLRFAGT K +ISL           RD  G Y     ED RE
Sbjct: 301  KCLAEAKKRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFPRDRVGFYNHLSFEDARE 360

Query: 1188 QFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
              LGQLR KCWNL+GK+  ++LIDK ++ G +GE +KG+EMM EIILRNRRI
Sbjct: 361  PLLGQLRIKCWNLMGKDKVMELIDKFIDLGRIGEWIKGIEMMIEIILRNRRI 412


>ref|YP_004222316.1| ribosomal protein S3 [Beta vulgaris subsp. maritima]
            gi|346683190|ref|YP_004842122.1| ribosomal protein S3
            [Beta macrocarpa] gi|317905652|emb|CBJ14050.1| ribosomal
            protein S3 [Beta vulgaris subsp. maritima]
            gi|319439831|emb|CBJ17541.1| ribosomal protein S3 [Beta
            vulgaris subsp. maritima] gi|345500108|emb|CBX24926.1|
            ribosomal protein S3 [Beta macrocarpa]
          Length = 551

 Score =  381 bits (978), Expect = e-103
 Identities = 228/413 (55%), Positives = 275/413 (66%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWF+DYYY KLVYQD++LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFNDYYYSKLVYQDINLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEGN 584
            +I HF K T ++ FLP RP+   R+  S     KG+WW  GKV  I      E    E N
Sbjct: 61   IIIHFQKRTFINFFLPRRPQRRKRRKKSRPGKTKGRWWELGKVGPIECLYSSEGRKEERN 120

Query: 585  EVRD--AGKRVKSVAANNQKKKLG--------------------QSNPLRELRVSGAL-G 695
            EVRD  AGKRV+S+  ++QKK+                      + N  + LRVSGA   
Sbjct: 121  EVRDRRAGKRVESIRLDDQKKQNEIRVWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFKH 180

Query: 696  PKAG---NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVM 848
            PK     ND+AFL   D SFKKT+ FKFFFP KS   G   +LL+R +PAVRPSLNYLVM
Sbjct: 181  PKYAEVVNDIAFLIENDSSFKKTKLFKFFFPKKSRYDGPTSHLLKRTLPAVRPSLNYLVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVE--GSEGGRLDQRIRSRIAFLVENSSS- 1019
              LLN K KMHFDPV+ LNHFVA G+ EP+T+    ++GG LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNTKKKMHFDPVLVLNHFVAPGVVEPSTMNRANAQGGSLDKRIRSRIAFFVESSTSQ 300

Query: 1020 -KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRDG--VYKKHLIEDTR 1184
             K L+E K  LTHFI QANDLRFAG RK +ISL          LRDG  VY     +D R
Sbjct: 301  KKCLAEAKKRLTHFIRQANDLRFAGRRKTTISLFPFFGATFFFLRDGVRVYNNLFFKDAR 360

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            EQ LGQLR KCWNL+GK+  +KLI+K ++ G + EL+KG+EMM EIIL+N RI
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMKLIEKFIDLGGIRELIKGIEMMIEIILKNIRI 413


>ref|NP_064078.2| rps3 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
            gi|87248050|gb|ABD36079.1| ribosomal protein S3 [Beta
            vulgaris subsp. vulgaris] gi|148491435|dbj|BAA99471.2|
            ribosomal protein S3 [Beta vulgaris subsp. vulgaris]
          Length = 551

 Score =  380 bits (976), Expect = e-103
 Identities = 228/413 (55%), Positives = 275/413 (66%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWF+DYYY KLVYQD++LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFNDYYYSKLVYQDLNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEGN 584
            +I HF K T ++ FLP RP+   R+  S     KG+WW  GKV  I      E    E N
Sbjct: 61   IIIHFQKRTFINFFLPRRPQRRKRRKKSRPGKTKGRWWELGKVGPIECLYSSEGRKEERN 120

Query: 585  EVRD--AGKRVKSVAANNQKKKLG--------------------QSNPLRELRVSGAL-G 695
            EVRD  AGKRV+S+  ++QKK+                      + N  + LRVSGA   
Sbjct: 121  EVRDRRAGKRVESIRLDDQKKQNEIRVWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFKH 180

Query: 696  PKAG---NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVM 848
            PK     ND+AFL   D SFKKT+ FKFFFP KS   G   +LL+R +PAVRPSLNYLVM
Sbjct: 181  PKYAEVVNDIAFLIENDSSFKKTKLFKFFFPKKSRYDGPTSHLLKRTLPAVRPSLNYLVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVE--GSEGGRLDQRIRSRIAFLVENSSS- 1019
              LLN K KMHFDPV+ LNHFVA G+ EP+T+    ++GG LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNTKKKMHFDPVLVLNHFVAPGVVEPSTMNRANAQGGSLDKRIRSRIAFFVESSTSQ 300

Query: 1020 -KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRDG--VYKKHLIEDTR 1184
             K L+E K  LTHFI QANDLRFAG RK +ISL          LRDG  VY     +D R
Sbjct: 301  KKCLAEAKKRLTHFIRQANDLRFAGRRKTTISLFPFFGATFFFLRDGVRVYNNLFFKDAR 360

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            EQ LGQLR KCWNL+GK+  +KLI+K ++ G + EL+KG+EMM EIIL+N RI
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMKLIEKFIDLGGIRELIKGIEMMIEIILKNIRI 413


>sp|Q04716.1|RT03_PETHY RecName: Full=Ribosomal protein S3, mitochondrial
            gi|14163|emb|CAA47420.1| S3 [Petunia x hybrida]
          Length = 562

 Score =  379 bits (973), Expect = e-102
 Identities = 232/413 (56%), Positives = 280/413 (67%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWFS YYYGK VYQDV+LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFS-YYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 59

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKV------KSIEHSDTEGN 584
            +I HFPK T +H FLP RP+ L R+  S     KG+W AFGKV       S + ++ E N
Sbjct: 60   IILHFPKRTFIHFFLPRRPRRLKRREKSRPVKEKGRWGAFGKVGPIGCLHSSDGTEEERN 119

Query: 585  EV--RDAGKRVKSVAANNQ----------KKKLG----------QSNPLRELRVSGAL-G 695
            EV  R AGKRV+S+  +++          KKK G          + N  + LRVSGA   
Sbjct: 120  EVRGRGAGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKH 179

Query: 696  PK-AG--NDVAFL--RDDSFKKTECFKFFFPDKSSS---YGNLLQR-VPAVRPSLNYLVM 848
            PK AG  ND+AFL   DDSF+KT  FKFFFP KS S     +LL+R +PAVRPSLNY VM
Sbjct: 180  PKYAGIENDIAFLIENDDSFRKTNLFKFFFPKKSRSDRPTSHLLKRTLPAVRPSLNYSVM 239

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVEG--SEGGRLDQRIRSRIAFLVENSSS- 1019
              LLN KNK+HFDPV+ LNHFVA G+AEP+T+ G  ++G  LD+RI S IAF VENS+S 
Sbjct: 240  QYLLNTKNKIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIASCIAFFVENSTSE 299

Query: 1020 -KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRD--GVYKKHLIEDTR 1184
             K L+E K  +THFI QANDLRFAGT K +ISL           RD  GVY     ED R
Sbjct: 300  KKCLAEAKKRVTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAR 359

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            EQ LGQLR KCWNL+GK+  ++LI+K ++   +GEL++G+EMM EIILRNRRI
Sbjct: 360  EQLLGQLRRKCWNLMGKDKVMELIEKFIDLNRIGELIRGIEMMIEIILRNRRI 412


>ref|YP_005090455.1| ribosomal protein S3 (mitochondrion) [Millettia pinnata]
            gi|357197318|gb|AET62915.1| ribosomal protein S3
            (mitochondrion) [Millettia pinnata]
          Length = 565

 Score =  378 bits (970), Expect = e-102
 Identities = 227/415 (54%), Positives = 282/415 (67%), Gaps = 55/415 (13%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWFSDYY+GKLVYQDV+LRSY GSIRPP + TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYFGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKV------KSIEHSDTEGN 584
            ++ +FPK T +H FLP RP+ L R+  S     KG+WWAFGKV       S ++++ E N
Sbjct: 61   ILINFPKRTFIHFFLPRRPRRLKRRKKSRPGKGKGRWWAFGKVGPIGCLHSSDNTEEERN 120

Query: 585  EVRD--AGKRVKSVAANNQKKKLG--------------------QSNPLRELRVSGAL-G 695
            EVR   AGKRV+S+  ++++K+                      + N  + LRVSGA   
Sbjct: 121  EVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFKH 180

Query: 696  PK-AG--NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVM 848
            PK AG  ND+AFL   DDSF+K + FK F P KS S G   +L +R +PAVRPSLNYLVM
Sbjct: 181  PKYAGVVNDIAFLIENDDSFRKLKFFKLFLPKKSRSDGPTSHLFKRTLPAVRPSLNYLVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVEG--SEGGRLDQRIRSRIAFLVENSSS- 1019
              LLN KNKMHFDPV+ LNHFVA G+AEP+T+ G  ++G  LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNRKNKMHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTSE 300

Query: 1020 -KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRD--GVYKKH--LIED 1178
             K L+E K  LTHFI  ANDLRFAGT K +ISL          LRD  G+   H    ED
Sbjct: 301  KKCLAEAKKRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFLRDRVGISNNHNLFFED 360

Query: 1179 TREQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
             RE  LG+LR KCWNL+GK+  ++LI+K ++ G +GE +KG+EMM EIILRNRRI
Sbjct: 361  AREPLLGKLRIKCWNLMGKDKVMELIEKFIDLGRIGEWIKGIEMMIEIILRNRRI 415


>emb|CBL51993.1| ribosomal protein S3 (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 551

 Score =  377 bits (968), Expect = e-102
 Identities = 226/413 (54%), Positives = 273/413 (66%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWF+DYYY KLVYQD++LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFNDYYYSKLVYQDINLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSI------EHSDTEGN 584
            +I HF K T ++ FLP RP+   R+  S     KG+WW  GKV  I      E    E N
Sbjct: 61   IIIHFQKRTFINFFLPRRPQRRKRRKKSRPGKTKGRWWELGKVGPIECLYSSEGRKEERN 120

Query: 585  EVRD--AGKRVKSVAANNQKKKLG--------------------QSNPLRELRVSGAL-G 695
            EVRD  AGKRV+S+  ++QKK+                      + N  + LRVSGA   
Sbjct: 121  EVRDRRAGKRVESIRLDDQKKQNEIRVWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 696  PKAG---NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVM 848
            PK     ND+AFL   D SFKKT+ FKFFFP KS   G   +LL+R +PAVRPSLNY VM
Sbjct: 181  PKYAEVVNDIAFLIENDSSFKKTKLFKFFFPKKSRYDGPTSHLLKRTLPAVRPSLNYSVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVE--GSEGGRLDQRIRSRIAFLVENSSS- 1019
              LLN K KMHFDPV+ LNHFVA G+ EP+T+    ++GG LD+RIRSRIAF VE+S+S 
Sbjct: 241  QYLLNTKKKMHFDPVLVLNHFVAPGVVEPSTMNRANAQGGSLDKRIRSRIAFFVESSTSQ 300

Query: 1020 -KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRDG--VYKKHLIEDTR 1184
             K L+E K  LTHFI QANDLRFAG RK +ISL           RDG  VY     +D R
Sbjct: 301  KKCLAEAKKRLTHFIRQANDLRFAGRRKTTISLFPFFGATFFFPRDGVRVYNNLFFKDAR 360

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            EQ LGQLR KCWNL+GK+  +KLI+K ++ G + EL+KG+EMM EIIL+N RI
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMKLIEKFIDLGGIRELIKGIEMMIEIILKNIRI 413


>ref|YP_004222806.1| ribosomal protein S3 [Vigna radiata] gi|308206736|gb|ADO19873.1|
            ribosomal protein S3 [Vigna radiata]
          Length = 563

 Score =  377 bits (968), Expect = e-102
 Identities = 228/412 (55%), Positives = 281/412 (68%), Gaps = 52/412 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSS FSDYYYGKLVYQDV+LRSY GSIRPP + TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSRFSDYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKV------KSIEHSDTEGN 584
            ++ HFPK T +H FLP RP+ L R+  S     KG+WWAFGKV       S ++++ E N
Sbjct: 61   ILIHFPKRTFIHFFLPRRPRRLKRRKKSRPGKEKGRWWAFGKVGPIGCLHSSDNTEEERN 120

Query: 585  EVRD--AGKRVKSVAANNQKKKLG--------------------QSNPLRELRVSGAL-G 695
            EVR   AGKRV+S+  ++++K+                      + N  + LRVSGA   
Sbjct: 121  EVRGRRAGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 696  PK-AG--NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVM 848
            PK AG  ND+AFL   DDSF+K + F+FFFP KS S G   +L +R +PAVRPSLNY VM
Sbjct: 181  PKYAGVVNDIAFLIENDDSFRKRKFFQFFFPKKSRSDGPTSHLFKRTLPAVRPSLNYSVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVEGSEGGR-LDQRIRSRIAFLVENSSS-- 1019
              LLN KN+MHFDPV+ LNHFVA G+AEP+T+ G++ GR LD+RIRSRIAF VE+S+S  
Sbjct: 241  QYLLNRKNQMHFDPVVVLNHFVAPGVAEPSTMGGAKQGRGLDKRIRSRIAFFVESSTSEK 300

Query: 1020 KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRD--GVYKKHLIEDTRE 1187
            K L+E K  LTHFI  ANDLRFAGT K +ISL           RD  G YK    ED RE
Sbjct: 301  KCLAEAKKRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFPRDRVGFYKNLSFEDARE 360

Query: 1188 QFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
              LGQLR KC NL+GK+  ++LI+K ++ G +GE +KG+EMM EIILRNRRI
Sbjct: 361  PLLGQLRIKCCNLMGKDKVMELIEKFIDLGRIGEWIKGIEMMIEIILRNRRI 412


>ref|YP_004237268.1| ribosomal protein S3 (mitochondrion) [Ricinus communis]
            gi|322394275|gb|ADW96032.1| ribosomal protein S3
            (mitochondrion) [Ricinus communis]
          Length = 563

 Score =  376 bits (966), Expect = e-101
 Identities = 228/413 (55%), Positives = 281/413 (68%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSS FSDYYYGK VYQDV+LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSRFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKV------KSIEHSDTEGN 584
            +I HFPK T ++ FL  RP+ L R+  +     KG+WW FGKV       S ++++ E N
Sbjct: 61   IILHFPKRTFINFFLSRRPRRLKRREKTRPGKEKGRWWTFGKVGPIRCLHSSDNTEEERN 120

Query: 585  EV--RDAGKRVKSVAANNQKKKLG--------------------QSNPLRELRVSGAL-G 695
            EV  R AGKRV+S+  ++++K+                      + N  + LRVSGA   
Sbjct: 121  EVRGRGAGKRVESIRLDDREKENEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 696  PK-AG--NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVM 848
            PK AG  ND+AFL   DDSF+KT+ FKFFFP KS S G   +LL+R +PAV  SLNY VM
Sbjct: 181  PKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVCLSLNYSVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVEG--SEGGRLDQRIRSRIAFLVENSSSK 1022
              LLN KN++HFDPV+ LNHFVA G+AEP+T+ G  ++G  LD+RIRSRIAF VE+S+S+
Sbjct: 241  QYLLNTKNQIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTSE 300

Query: 1023 S--LSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRD--GVYKKHLIEDTR 1184
               LSE K  LTHFI QANDLRFAGT K +ISL           RD  GVY     ED R
Sbjct: 301  KNCLSEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAR 360

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            EQ LGQLR KCWNL+GK+  ++LI+K +  G +GEL+KG+EMM EIILRNRRI
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMELIEKFINLGGIGELIKGIEMMIEIILRNRRI 413


>ref|YP_006666137.1| ribosomal protein S3 (mitochondrion) [Malus domestica]
            gi|401661940|emb|CBX33400.1| ribosomal protein S3
            (mitochondrion) [Malus domestica]
          Length = 554

 Score =  374 bits (960), Expect = e-101
 Identities = 227/413 (54%), Positives = 277/413 (67%), Gaps = 53/413 (12%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWFSDYYYGKLVYQDV+LRSY GSIRPPT+ TFGFRLG C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGTC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWWAFGKVKSIE--HS----DTEGN 584
            +I HFPK T +H FLP RP+ L R+  S     KG+WWAFGKV  I   HS    + E N
Sbjct: 61   IILHFPKRTFIHFFLPRRPRRLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSGDTEEERN 120

Query: 585  EV--RDAGKRVKSVAANNQKKKLG--------------------QSNPLRELRVSGAL-G 695
            EV  R +GKRV+S+  ++++K+                      + N  + LRVS A   
Sbjct: 121  EVRGRGSGKRVESIRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSRAFKH 180

Query: 696  PK-AG--NDVAFL--RDDSFKKTECFKFFFPDKSSSYG---NLLQR-VPAVRPSLNYLVM 848
            PK AG  N +AFL   DD F+KT+ FKFF P KS S G   +LL+R +PAVRPS NY VM
Sbjct: 181  PKYAGVVNGIAFLIENDDPFRKTKLFKFFLPKKSRSDGSTSHLLKRTLPAVRPSFNYSVM 240

Query: 849  HDLLNAKNKMHFDPVMALNHFVARGLAEPATVEG--SEGGRLDQRIRSRIAFLVENSSS- 1019
              LLN KN+MHFDPV+ LNHFVA G+AEP+T+ G  ++G  LD+RIRSRIA  VE+S+S 
Sbjct: 241  QYLLNTKNQMHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSRIALFVESSTSD 300

Query: 1020 -KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRDGV--YKKHLIEDTR 1184
             K L+E K  LT FI QANDLRFAGT K +I L           RDGV  Y     ED R
Sbjct: 301  KKCLAEAKKRLTRFIRQANDLRFAGTTKTTIPLFPFFGATFFFPRDGVGMYNNLFFEDAR 360

Query: 1185 EQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            EQ LGQLR KCWNL+GK+  ++LI+K ++   +GEL++G+EMM EIILRNR+I
Sbjct: 361  EQLLGQLRIKCWNLMGKDKVMELIEKFIDLDRIGELIRGIEMMIEIILRNRQI 413


>ref|YP_002608205.2| ribosomal protein S3 [Carica papaya] gi|291147676|gb|ACB20494.2|
            ribosomal protein S3 (mitochondrion) [Carica papaya]
          Length = 550

 Score =  374 bits (960), Expect = e-101
 Identities = 227/414 (54%), Positives = 278/414 (67%), Gaps = 54/414 (13%)
 Frame = +3

Query: 258  MGRKGNPIAVRLDVNLKSDSSWFSDYYYGKLVYQDVSLRSYLGSIRPPTKKTFGFRLGKC 437
            M RKGNPI+VRLD+N  SDSSWFSDYYYGK VYQDV+LRSY GSIRPPT+ TFGFRLG+C
Sbjct: 1    MARKGNPISVRLDLNRSSDSSWFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 438  VIQHFPKVTVVHNFLPHRPKTLDRKSTS-----KGQWW-AFGKV------KSIEHSDTEG 581
            +I HFPK T +H FLP RP+ L R+  +     KG+WW  FGKV       S + ++ E 
Sbjct: 61   IILHFPKRTFIHFFLPRRPRRLKRRKKTRPGKEKGRWWTTFGKVGPIGCLHSSDDTEEER 120

Query: 582  NEV--RDAGKRVKSVAANNQ----------KKKLG----------QSNPLRELRVSGALG 695
            NEV  R AGKRV+S+  +++          KKK G          + N  + LRVSGA  
Sbjct: 121  NEVRGRGAGKRVESIRLDDRKKQNEIRIWPKKKQGYRYHDRSPSIKKNLSKSLRVSGAFK 180

Query: 696  PK--AG--NDVAFL--RDDSFKKTECFKFFFPDKSSS---YGNLLQR-VPAVRPSLNYLV 845
                AG  ND+A L   DDSF+KT+ FKFFFP KS S     +LL+R +PAVRPSLNY V
Sbjct: 181  HPNYAGVVNDIASLIENDDSFRKTKLFKFFFPKKSRSDDPTSHLLKRTLPAVRPSLNYSV 240

Query: 846  MHDLLNAKNKMHFDPVMALNHFVARGLAEPATV--EGSEGGRLDQRIRSRIAFLVENSSS 1019
            M  LLN KN++HFDPV+ LNHFVA G+AEP+T+    ++G  LD+RIRSRIAF VE+S+S
Sbjct: 241  MQYLLNTKNQIHFDPVVVLNHFVAPGVAEPSTMGRANAQGRSLDKRIRSRIAFFVESSTS 300

Query: 1020 --KSLSEDK--LTHFIHQANDLRFAGTRKNSISLXXXXXXXXXXLRD--GVYKKHLIEDT 1181
              K L+E K  LTHFI QANDLRFAGT K +ISL          LRD  GVYK    ED 
Sbjct: 301  EKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDGVGVYKNLFFEDA 360

Query: 1182 REQFLGQLRTKCWNLLGKE--VKLIDKVLEQGEVGELLKGVEMMTEIILRNRRI 1337
            REQ L +LR KCWNL+GK+  ++LI+K+   G + EL+KG+EMM EIILR  +I
Sbjct: 361  REQLLEKLRIKCWNLMGKDKVMELIEKLRNLGRIEELIKGIEMMIEIILRKSKI 414