BLASTX nr result

ID: Papaver27_contig00042166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00042166
         (603 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21441.3| unnamed protein product [Vitis vinifera]               54   7e-06
ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containi...    54   7e-06
ref|XP_006829716.1| hypothetical protein AMTR_s00126p00080460 [A...    50   9e-06

>emb|CBI21441.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score = 53.5 bits (127), Expect(2) = 7e-06
 Identities = 23/37 (62%), Positives = 32/37 (86%)
 Frame = +3

Query: 168 IFSFESSNPGDYVTLSNIYARAGKFDDSVSVKKLMEE 278
           +F  E  + G+YVTLSNIYARAG++DD+V+V+KLME+
Sbjct: 784 LFQLEPEHAGNYVTLSNIYARAGRWDDAVAVRKLMED 820



 Score = 22.3 bits (46), Expect(2) = 7e-06
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 124 AHQNIDMGKIAAEHLY 171
           A QN+ + K+AAE L+
Sbjct: 770 AQQNVSVAKLAAEQLF 785


>ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Vitis vinifera]
          Length = 634

 Score = 53.5 bits (127), Expect(2) = 7e-06
 Identities = 23/37 (62%), Positives = 32/37 (86%)
 Frame = +3

Query: 168 IFSFESSNPGDYVTLSNIYARAGKFDDSVSVKKLMEE 278
           +F  E  + G+YVTLSNIYARAG++DD+V+V+KLME+
Sbjct: 586 LFQLEPEHAGNYVTLSNIYARAGRWDDAVAVRKLMED 622



 Score = 22.3 bits (46), Expect(2) = 7e-06
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 124 AHQNIDMGKIAAEHLY 171
           A QN+ + K+AAE L+
Sbjct: 572 AQQNVSVAKLAAEQLF 587


>ref|XP_006829716.1| hypothetical protein AMTR_s00126p00080460 [Amborella trichopoda]
           gi|548835235|gb|ERM97132.1| hypothetical protein
           AMTR_s00126p00080460 [Amborella trichopoda]
          Length = 358

 Score = 49.7 bits (117), Expect(2) = 9e-06
 Identities = 20/36 (55%), Positives = 28/36 (77%)
 Frame = +3

Query: 168 IFSFESSNPGDYVTLSNIYARAGKFDDSVSVKKLME 275
           +F  E  NPG+Y+TLSNIY R G++DD+ SV++ ME
Sbjct: 305 LFVLEPENPGNYITLSNIYVRVGRWDDAASVRRRME 340



 Score = 25.8 bits (55), Expect(2) = 9e-06
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +1

Query: 127 HQNIDMGKIAAEHLYLV 177
           HQN+  G+IAAE L+++
Sbjct: 292 HQNVHFGRIAAERLFVL 308


Top